Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258800 | XP_024627936.2 | 81.707 | 164 | 30 | 0 | 115 | 278 | 28 | 191 | 9.80e-96 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258800 | sp|Q9SZL8|FRS5_ARATH | 45.679 | 162 | 88 | 0 | 117 | 278 | 383 | 544 | 2.34e-45 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258800 | A0A396JW00 | 64.348 | 115 | 40 | 1 | 2 | 116 | 13 | 126 | 1.03e-38 | 154 |
| Msa0258800 | A0A396JW00 | 81.818 | 165 | 30 | 0 | 114 | 278 | 355 | 519 | 4.38e-95 | 303 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0258800 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258800 | MtrunA17_Chr1g0202341 | 81.818 | 165 | 30 | 0 | 114 | 278 | 355 | 519 | 8.43e-99 | 303 |
| Msa0258800 | MtrunA17_Chr1g0202341 | 64.348 | 115 | 40 | 1 | 2 | 116 | 13 | 126 | 1.98e-42 | 154 |
| Msa0258800 | MtrunA17_Chr5g0448761 | 44.444 | 162 | 90 | 0 | 117 | 278 | 374 | 535 | 1.59e-45 | 163 |
| Msa0258800 | MtrunA17_Chr5g0448511 | 38.272 | 162 | 100 | 0 | 117 | 278 | 146 | 307 | 7.08e-38 | 140 |
| Msa0258800 | MtrunA17_Chr2g0296781 | 38.788 | 165 | 100 | 1 | 114 | 278 | 297 | 460 | 9.05e-34 | 129 |
| Msa0258800 | MtrunA17_Chr3g0118611 | 37.654 | 162 | 97 | 2 | 119 | 278 | 252 | 411 | 5.31e-33 | 127 |
| Msa0258800 | MtrunA17_Chr6g0477261 | 38.182 | 165 | 101 | 1 | 114 | 278 | 186 | 349 | 7.41e-33 | 127 |
| Msa0258800 | MtrunA17_Chr5g0441581 | 39.080 | 174 | 103 | 2 | 103 | 276 | 316 | 486 | 8.06e-33 | 127 |
| Msa0258800 | MtrunA17_Chr8g0363841 | 38.650 | 163 | 98 | 2 | 117 | 278 | 325 | 486 | 7.99e-32 | 124 |
| Msa0258800 | MtrunA17_Chr1g0207551 | 37.195 | 164 | 103 | 0 | 115 | 278 | 337 | 500 | 1.60e-31 | 123 |
| Msa0258800 | MtrunA17_Chr1g0196541 | 37.576 | 165 | 102 | 1 | 114 | 278 | 297 | 460 | 2.81e-31 | 122 |
| Msa0258800 | MtrunA17_Chr3g0077241 | 61.538 | 91 | 30 | 3 | 3 | 92 | 1 | 87 | 4.40e-31 | 112 |
| Msa0258800 | MtrunA17_Chr5g0440451 | 39.597 | 149 | 88 | 1 | 130 | 278 | 368 | 514 | 6.35e-30 | 118 |
| Msa0258800 | MtrunA17_Chr2g0329031 | 32.716 | 162 | 109 | 0 | 117 | 278 | 312 | 473 | 2.02e-29 | 117 |
| Msa0258800 | MtrunA17_Chr3g0080351 | 35.000 | 160 | 104 | 0 | 117 | 276 | 373 | 532 | 2.54e-29 | 117 |
| Msa0258800 | MtrunA17_Chr1g0198761 | 32.927 | 164 | 106 | 3 | 117 | 278 | 365 | 526 | 7.89e-28 | 112 |
| Msa0258800 | MtrunA17_Chr2g0291581 | 34.545 | 165 | 107 | 1 | 114 | 278 | 361 | 524 | 1.58e-27 | 111 |
| Msa0258800 | MtrunA17_Chr2g0287061 | 37.423 | 163 | 96 | 2 | 116 | 278 | 454 | 610 | 2.60e-27 | 111 |
| Msa0258800 | MtrunA17_Chr3g0082121 | 32.278 | 158 | 106 | 1 | 117 | 273 | 343 | 500 | 1.05e-24 | 103 |
| Msa0258800 | MtrunA17_Chr4g0052331 | 50.549 | 91 | 44 | 1 | 1 | 91 | 4 | 93 | 1.85e-24 | 94.4 |
| Msa0258800 | MtrunA17_Chr2g0276841 | 33.974 | 156 | 101 | 2 | 117 | 271 | 383 | 537 | 2.16e-24 | 102 |
| Msa0258800 | MtrunA17_Chr2g0294841 | 28.846 | 156 | 109 | 2 | 117 | 271 | 361 | 515 | 2.68e-20 | 90.5 |
| Msa0258800 | MtrunA17_Chr1g0203051 | 27.273 | 165 | 114 | 2 | 115 | 278 | 385 | 544 | 1.57e-18 | 85.1 |
| Msa0258800 | MtrunA17_Chr6g0458391 | 27.879 | 165 | 119 | 0 | 114 | 278 | 512 | 676 | 1.67e-18 | 85.1 |
| Msa0258800 | MtrunA17_Chr2g0308841 | 29.545 | 132 | 92 | 1 | 148 | 278 | 6 | 137 | 1.65e-16 | 77.4 |
| Msa0258800 | MtrunA17_Chr2g0287651 | 26.380 | 163 | 114 | 2 | 115 | 276 | 383 | 540 | 3.22e-16 | 78.6 |
| Msa0258800 | MtrunA17_Chr5g0431001 | 34.906 | 106 | 67 | 2 | 117 | 221 | 379 | 483 | 4.32e-16 | 77.8 |
| Msa0258800 | MtrunA17_Chr2g0290391 | 31.875 | 160 | 101 | 4 | 117 | 275 | 372 | 524 | 5.42e-16 | 77.8 |
| Msa0258800 | MtrunA17_Chr2g0324011 | 24.699 | 166 | 120 | 2 | 116 | 278 | 316 | 479 | 1.69e-15 | 76.3 |
| Msa0258800 | MtrunA17_Chr2g0291591 | 27.972 | 143 | 103 | 0 | 136 | 278 | 385 | 527 | 3.90e-15 | 75.1 |
| Msa0258800 | MtrunA17_Chr1g0203721 | 23.926 | 163 | 124 | 0 | 116 | 278 | 372 | 534 | 5.58e-15 | 74.7 |
| Msa0258800 | MtrunA17_Chr2g0329361 | 50.000 | 66 | 33 | 0 | 39 | 104 | 59 | 124 | 2.26e-14 | 71.2 |
| Msa0258800 | MtrunA17_Chr1g0164591 | 33.721 | 86 | 57 | 0 | 117 | 202 | 223 | 308 | 5.75e-13 | 68.2 |
| Msa0258800 | MtrunA17_Chr1g0149131 | 33.333 | 81 | 54 | 0 | 117 | 197 | 30 | 110 | 1.33e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0258800 | AT4G38180.1 | 45.679 | 162 | 88 | 0 | 117 | 278 | 383 | 544 | 2.38e-46 | 166 |
| Msa0258800 | AT4G15090.1 | 37.654 | 162 | 101 | 0 | 117 | 278 | 359 | 520 | 2.21e-35 | 134 |
| Msa0258800 | AT4G15090.5 | 37.654 | 162 | 101 | 0 | 117 | 278 | 359 | 520 | 2.21e-35 | 134 |
| Msa0258800 | AT4G15090.3 | 37.654 | 162 | 101 | 0 | 117 | 278 | 359 | 520 | 2.21e-35 | 134 |
| Msa0258800 | AT4G15090.2 | 37.654 | 162 | 101 | 0 | 117 | 278 | 359 | 520 | 2.21e-35 | 134 |
| Msa0258800 | AT4G15090.4 | 37.654 | 162 | 101 | 0 | 117 | 278 | 359 | 520 | 2.21e-35 | 134 |
| Msa0258800 | AT4G38170.1 | 33.548 | 155 | 103 | 0 | 124 | 278 | 155 | 309 | 2.94e-31 | 122 |
| Msa0258800 | AT5G18960.2 | 39.634 | 164 | 93 | 2 | 115 | 278 | 481 | 638 | 3.25e-31 | 122 |
| Msa0258800 | AT5G18960.2 | 44.286 | 70 | 35 | 1 | 30 | 95 | 28 | 97 | 7.70e-11 | 62.8 |
| Msa0258800 | AT5G18960.1 | 39.634 | 164 | 93 | 2 | 115 | 278 | 481 | 638 | 3.25e-31 | 122 |
| Msa0258800 | AT5G18960.1 | 44.286 | 70 | 35 | 1 | 30 | 95 | 28 | 97 | 7.70e-11 | 62.8 |
| Msa0258800 | AT3G22170.2 | 35.185 | 162 | 105 | 0 | 117 | 278 | 368 | 529 | 3.17e-30 | 120 |
| Msa0258800 | AT3G22170.1 | 35.185 | 162 | 105 | 0 | 117 | 278 | 368 | 529 | 3.17e-30 | 120 |
| Msa0258800 | AT2G27110.3 | 34.395 | 157 | 101 | 1 | 122 | 278 | 190 | 344 | 2.52e-29 | 117 |
| Msa0258800 | AT2G27110.2 | 34.395 | 157 | 101 | 1 | 122 | 278 | 335 | 489 | 2.72e-29 | 117 |
| Msa0258800 | AT2G27110.1 | 34.395 | 157 | 101 | 1 | 122 | 278 | 335 | 489 | 2.72e-29 | 117 |
| Msa0258800 | AT3G06250.2 | 36.810 | 163 | 97 | 2 | 116 | 278 | 458 | 614 | 8.92e-29 | 115 |
| Msa0258800 | AT3G06250.2 | 44.444 | 81 | 42 | 1 | 18 | 95 | 2 | 82 | 1.90e-13 | 70.9 |
| Msa0258800 | AT3G06250.1 | 36.810 | 163 | 97 | 2 | 116 | 278 | 458 | 614 | 8.92e-29 | 115 |
| Msa0258800 | AT3G06250.1 | 44.444 | 81 | 42 | 1 | 18 | 95 | 2 | 82 | 1.90e-13 | 70.9 |
| Msa0258800 | AT3G06250.3 | 36.810 | 163 | 97 | 2 | 116 | 278 | 458 | 614 | 8.92e-29 | 115 |
| Msa0258800 | AT3G06250.3 | 44.444 | 81 | 42 | 1 | 18 | 95 | 2 | 82 | 1.90e-13 | 70.9 |
| Msa0258800 | AT1G76320.3 | 33.533 | 167 | 109 | 1 | 112 | 278 | 293 | 457 | 4.64e-27 | 110 |
| Msa0258800 | AT1G76320.2 | 33.533 | 167 | 109 | 1 | 112 | 278 | 293 | 457 | 4.76e-27 | 110 |
| Msa0258800 | AT1G76320.1 | 33.533 | 167 | 109 | 1 | 112 | 278 | 293 | 457 | 4.86e-27 | 110 |
| Msa0258800 | AT1G76320.4 | 33.533 | 167 | 109 | 1 | 112 | 278 | 293 | 457 | 4.86e-27 | 110 |
| Msa0258800 | AT1G52520.1 | 31.953 | 169 | 107 | 3 | 114 | 278 | 377 | 541 | 1.28e-25 | 106 |
| Msa0258800 | AT1G10240.2 | 33.333 | 156 | 102 | 2 | 117 | 271 | 361 | 515 | 1.86e-24 | 103 |
| Msa0258800 | AT1G10240.1 | 33.333 | 156 | 102 | 2 | 117 | 271 | 361 | 515 | 1.86e-24 | 103 |
| Msa0258800 | AT4G19990.3 | 30.864 | 162 | 112 | 0 | 117 | 278 | 307 | 468 | 7.33e-23 | 98.6 |
| Msa0258800 | AT4G19990.4 | 30.864 | 162 | 112 | 0 | 117 | 278 | 307 | 468 | 7.33e-23 | 98.6 |
| Msa0258800 | AT4G19990.1 | 30.864 | 162 | 112 | 0 | 117 | 278 | 250 | 411 | 8.74e-23 | 98.2 |
| Msa0258800 | AT4G19990.5 | 30.864 | 162 | 112 | 0 | 117 | 278 | 307 | 468 | 8.77e-23 | 98.2 |
| Msa0258800 | AT4G19990.7 | 30.864 | 162 | 112 | 0 | 117 | 278 | 321 | 482 | 9.52e-23 | 98.2 |
| Msa0258800 | AT4G19990.6 | 30.864 | 162 | 112 | 0 | 117 | 278 | 307 | 468 | 1.00e-22 | 98.2 |
| Msa0258800 | AT4G19990.2 | 30.864 | 162 | 112 | 0 | 117 | 278 | 307 | 468 | 1.00e-22 | 98.2 |
| Msa0258800 | AT2G32250.6 | 30.909 | 165 | 112 | 2 | 115 | 278 | 301 | 464 | 1.03e-22 | 98.2 |
| Msa0258800 | AT2G32250.1 | 30.909 | 165 | 112 | 2 | 115 | 278 | 301 | 464 | 1.03e-22 | 98.2 |
| Msa0258800 | AT2G32250.3 | 30.909 | 165 | 112 | 2 | 115 | 278 | 301 | 464 | 1.03e-22 | 98.2 |
| Msa0258800 | AT2G32250.8 | 30.909 | 165 | 112 | 2 | 115 | 278 | 260 | 423 | 1.04e-22 | 98.2 |
| Msa0258800 | AT2G32250.7 | 30.909 | 165 | 112 | 2 | 115 | 278 | 260 | 423 | 1.09e-22 | 98.2 |
| Msa0258800 | AT2G32250.2 | 30.909 | 165 | 112 | 2 | 115 | 278 | 301 | 464 | 1.10e-22 | 98.2 |
| Msa0258800 | AT2G32250.4 | 30.909 | 165 | 112 | 2 | 115 | 278 | 301 | 464 | 1.10e-22 | 98.2 |
| Msa0258800 | AT2G32250.5 | 30.909 | 165 | 112 | 2 | 115 | 278 | 301 | 464 | 1.14e-22 | 97.8 |
| Msa0258800 | AT1G80010.1 | 26.506 | 166 | 120 | 2 | 114 | 278 | 402 | 566 | 2.78e-17 | 82.0 |
| Msa0258800 | AT5G28530.1 | 24.540 | 163 | 121 | 1 | 116 | 278 | 375 | 535 | 9.40e-14 | 71.6 |
| Msa0258800 | AT5G28530.4 | 24.540 | 163 | 121 | 1 | 116 | 278 | 312 | 472 | 1.16e-13 | 71.2 |
| Msa0258800 | AT5G28530.3 | 23.926 | 163 | 118 | 1 | 116 | 278 | 375 | 531 | 5.93e-13 | 69.3 |
| Msa0258800 | AT5G28530.2 | 23.926 | 163 | 118 | 1 | 116 | 278 | 375 | 531 | 5.93e-13 | 69.3 |
| Msa0258800 | AT5G28530.5 | 23.926 | 163 | 118 | 1 | 116 | 278 | 312 | 468 | 7.19e-13 | 68.9 |
Find 53 sgRNAs with CRISPR-Local
Find 214 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTCATACTTTCACTTCTT+TGG | 0.142920 | 2_2:-55424062 | None:intergenic |
| AATGGTAGTCCGTTATTTAT+AGG | 0.222226 | 2_2:-55422869 | None:intergenic |
| TTGTTCAAAGGAAGAGTTTC+GGG | 0.238612 | 2_2:+55423051 | Msa0258800:CDS |
| ATTCATACTTTCACTTCTTT+GGG | 0.265156 | 2_2:-55424061 | None:intergenic |
| CATTCCTTCAAAGGGCTCTA+AGG | 0.274189 | 2_2:-55422900 | None:intergenic |
| CTCTCTTTCCTTGTTGTAAC+GGG | 0.308781 | 2_2:-55424160 | None:intergenic |
| AGAACAGACGGAATGATAAT+TGG | 0.340924 | 2_2:+55423016 | Msa0258800:CDS |
| TATACTCCATTCGAGCAAAA+TGG | 0.347854 | 2_2:+55423992 | Msa0258800:CDS |
| ATGTCAAGAGCAGCAGTTTC+AGG | 0.356702 | 2_2:-55422842 | None:intergenic |
| TAGAAGAATTTGATTCTGAA+TGG | 0.406738 | 2_2:+55423917 | Msa0258800:CDS |
| CAGATTAAAGATGACAGATA+TGG | 0.414073 | 2_2:+55422784 | None:intergenic |
| TTTGATGCTTCTTCTTCCAT+TGG | 0.427301 | 2_2:-55424231 | None:intergenic |
| TCTCTCTTTCCTTGTTGTAA+CGG | 0.435704 | 2_2:-55424161 | None:intergenic |
| AGAAGAATTTGATTCTGAAT+GGG | 0.459561 | 2_2:+55423918 | Msa0258800:CDS |
| CCTTGTTGTAACGGGCATCA+AGG | 0.465328 | 2_2:-55424152 | None:intergenic |
| GAAGCAATGATAGATACATA+TGG | 0.475667 | 2_2:+55423940 | Msa0258800:CDS |
| CTTAGAGCCCTTTGAAGGAA+TGG | 0.476103 | 2_2:+55422901 | Msa0258800:CDS |
| TTAATCATCATTATTGTATG+TGG | 0.477141 | 2_2:+55423794 | Msa0258800:CDS |
| TTTGTTCAAAGGAAGAGTTT+CGG | 0.478159 | 2_2:+55423050 | Msa0258800:CDS |
| AGGCAAGGAATCACTACAAA+AGG | 0.478706 | 2_2:+55422942 | Msa0258800:CDS |
| GGATATAAAGTTCGCAAAAG+TGG | 0.480862 | 2_2:-55424210 | None:intergenic |
| TTCAGAATCAAATTCTTCTA+CGG | 0.481612 | 2_2:-55423914 | None:intergenic |
| ATTCCTTCAAAGGGCTCTAA+GGG | 0.488264 | 2_2:-55422899 | None:intergenic |
| TTTAACTTTCGCATGGGCCG+TGG | 0.490559 | 2_2:+55422983 | Msa0258800:CDS |
| TGTGAACTCCATTCCTTCAA+AGG | 0.507742 | 2_2:-55422909 | None:intergenic |
| TTTGCGAACTTTATATCCAA+TGG | 0.514843 | 2_2:+55424215 | Msa0258800:CDS |
| GTGAACTCCATTCCTTCAAA+GGG | 0.518109 | 2_2:-55422908 | None:intergenic |
| TGTGTCACAAACTTGCTCAA+TGG | 0.518813 | 2_2:-55424117 | None:intergenic |
| GTGATTCCTTGCCTCTTCGA+TGG | 0.520594 | 2_2:-55422933 | None:intergenic |
| TAAAGAGTTTCTTTGTTCAA+AGG | 0.523442 | 2_2:+55423039 | Msa0258800:CDS |
| CTTGTTGTAACGGGCATCAA+GGG | 0.523610 | 2_2:-55424151 | None:intergenic |
| GACATGGATCCTATAAATAA+CGG | 0.523874 | 2_2:+55422860 | Msa0258800:CDS |
| ATTCTTCTACGGTTGTACAT+AGG | 0.527044 | 2_2:-55423903 | None:intergenic |
| AAATCATGACGTACATAAGC+AGG | 0.530663 | 2_2:-55424018 | None:intergenic |
| CATACTTTCACTTCTTTGGG+TGG | 0.534169 | 2_2:-55424058 | None:intergenic |
| ATGGGTTGCAAGATAATCAA+TGG | 0.535566 | 2_2:+55423959 | Msa0258800:CDS |
| GTCTCAGACATGATGAAACT+AGG | 0.539775 | 2_2:+55423107 | Msa0258800:CDS |
| AAGCAATGATAGATACATAT+GGG | 0.546295 | 2_2:+55423941 | Msa0258800:CDS |
| TAGACATGATTCAAGTACTC+TGG | 0.558386 | 2_2:-55423835 | None:intergenic |
| TGAAACTGCTGCTCTTGACA+TGG | 0.571525 | 2_2:+55422844 | Msa0258800:CDS |
| TCTCAGACATGATGAAACTA+GGG | 0.588791 | 2_2:+55423108 | Msa0258800:CDS |
| AAGCATCAAAAGTTTATACA+AGG | 0.598083 | 2_2:+55424244 | Msa0258800:CDS |
| CCTTGATGCCCGTTACAACA+AGG | 0.616438 | 2_2:+55424152 | Msa0258800:CDS |
| TACATCATCAGAACAAGCCA+TGG | 0.620956 | 2_2:-55422819 | None:intergenic |
| TCACATCCATCGAAGAGGCA+AGG | 0.624553 | 2_2:+55422927 | Msa0258800:CDS |
| CTGTTCTTGATTTAGTACCA+CGG | 0.626055 | 2_2:-55423000 | None:intergenic |
| AAAAGGTACGCTAAGAACAA+AGG | 0.638535 | 2_2:+55422959 | Msa0258800:CDS |
| TCCTTCAAAGGGCTCTAAGG+GGG | 0.640867 | 2_2:-55422897 | None:intergenic |
| ATCATCAGAACAAGCCATGG+TGG | 0.649034 | 2_2:-55422816 | None:intergenic |
| GGTACTAAATCAAGAACAGA+CGG | 0.650539 | 2_2:+55423004 | Msa0258800:CDS |
| TTCCTTCAAAGGGCTCTAAG+GGG | 0.673359 | 2_2:-55422898 | None:intergenic |
| GGAGTTCACATCCATCGAAG+AGG | 0.673976 | 2_2:+55422922 | Msa0258800:CDS |
| TATGGATGAAGATTCCACCA+TGG | 0.721549 | 2_2:+55422802 | Msa0258800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAGTATGAATAAATTTTTTA+AGG | + | chr2_2:55424074-55424093 | Msa0258800:CDS | 10.0% |
| !!! | AAGTATGAATAAATTTTTTA+AGG | + | chr2_2:55424074-55424093 | Msa0258800:CDS | 10.0% |
| !! | TATTTAAAAAAAAGTGAAGA+TGG | + | chr2_2:55423151-55423170 | Msa0258800:intron | 15.0% |
| !! | TATTTAAAAAAAAGTGAAGA+TGG | + | chr2_2:55423151-55423170 | Msa0258800:intron | 15.0% |
| !!! | CAATTGACAATTTTTAAAGT+AGG | - | chr2_2:55423419-55423438 | None:intergenic | 20.0% |
| !!! | AAAATTAGCAAATTGCTTTT+GGG | + | chr2_2:55423483-55423502 | Msa0258800:intron | 20.0% |
| !!! | AAAATGGCATACAAATATTT+TGG | + | chr2_2:55423520-55423539 | Msa0258800:intron | 20.0% |
| !! | TATTTATTTGTCAAGTATGT+CGG | - | chr2_2:55423565-55423584 | None:intergenic | 20.0% |
| !! | TTAATCATCATTATTGTATG+TGG | + | chr2_2:55423794-55423813 | Msa0258800:CDS | 20.0% |
| !!! | CAATTGACAATTTTTAAAGT+AGG | - | chr2_2:55423419-55423438 | None:intergenic | 20.0% |
| !!! | AAAATTAGCAAATTGCTTTT+GGG | + | chr2_2:55423483-55423502 | Msa0258800:intron | 20.0% |
| !!! | AAAATGGCATACAAATATTT+TGG | + | chr2_2:55423520-55423539 | Msa0258800:intron | 20.0% |
| !! | TATTTATTTGTCAAGTATGT+CGG | - | chr2_2:55423565-55423584 | None:intergenic | 20.0% |
| !! | TTAATCATCATTATTGTATG+TGG | + | chr2_2:55423794-55423813 | Msa0258800:CDS | 20.0% |
| ! | TAAAGAGTTTCTTTGTTCAA+AGG | + | chr2_2:55423039-55423058 | Msa0258800:CDS | 25.0% |
| ! | TAAAAAAAAGTGAAGATGGA+TGG | + | chr2_2:55423155-55423174 | Msa0258800:intron | 25.0% |
| ! | AAAAAAAAGTGAAGATGGAT+GGG | + | chr2_2:55423156-55423175 | Msa0258800:intron | 25.0% |
| !!! | GGTTGTTTCAAGATTTTTAA+GGG | + | chr2_2:55423177-55423196 | Msa0258800:intron | 25.0% |
| ! | GAGAAAATAGTACATGATTA+TGG | - | chr2_2:55423204-55423223 | None:intergenic | 25.0% |
| ! | AGACAAAAGCAATTAGAAAA+AGG | + | chr2_2:55423373-55423392 | Msa0258800:intron | 25.0% |
| !! | GTTTTTCTATGCATTTCAAA+TGG | + | chr2_2:55423450-55423469 | Msa0258800:intron | 25.0% |
| !! | GAAAATTAGCAAATTGCTTT+TGG | + | chr2_2:55423482-55423501 | Msa0258800:intron | 25.0% |
| !!! | ATACAAATATTTTGGTGATG+TGG | + | chr2_2:55423528-55423547 | Msa0258800:intron | 25.0% |
| !! | CATCAACAATCTATTCTTTT+TGG | + | chr2_2:55423622-55423641 | Msa0258800:intron | 25.0% |
| !!! | AAACTAAAGAGAGTTTTGTT+TGG | + | chr2_2:55423665-55423684 | Msa0258800:intron | 25.0% |
| ! | CAATAATGATGATTAACCTT+TGG | - | chr2_2:55423790-55423809 | None:intergenic | 25.0% |
| ! | TTCAGAATCAAATTCTTCTA+CGG | - | chr2_2:55423917-55423936 | None:intergenic | 25.0% |
| ! | TAGAAGAATTTGATTCTGAA+TGG | + | chr2_2:55423917-55423936 | Msa0258800:CDS | 25.0% |
| ! | AGAAGAATTTGATTCTGAAT+GGG | + | chr2_2:55423918-55423937 | Msa0258800:CDS | 25.0% |
| ! | AAGCAATGATAGATACATAT+GGG | + | chr2_2:55423941-55423960 | Msa0258800:CDS | 25.0% |
| ! | ATTCATACTTTCACTTCTTT+GGG | - | chr2_2:55424064-55424083 | None:intergenic | 25.0% |
| ! | TATTCATACTTTCACTTCTT+TGG | - | chr2_2:55424065-55424084 | None:intergenic | 25.0% |
| ! | AAGCATCAAAAGTTTATACA+AGG | + | chr2_2:55424244-55424263 | Msa0258800:CDS | 25.0% |
| ! | TAAAGAGTTTCTTTGTTCAA+AGG | + | chr2_2:55423039-55423058 | Msa0258800:CDS | 25.0% |
| ! | TAAAAAAAAGTGAAGATGGA+TGG | + | chr2_2:55423155-55423174 | Msa0258800:intron | 25.0% |
| ! | AAAAAAAAGTGAAGATGGAT+GGG | + | chr2_2:55423156-55423175 | Msa0258800:intron | 25.0% |
| !!! | GGTTGTTTCAAGATTTTTAA+GGG | + | chr2_2:55423177-55423196 | Msa0258800:intron | 25.0% |
| ! | GAGAAAATAGTACATGATTA+TGG | - | chr2_2:55423204-55423223 | None:intergenic | 25.0% |
| ! | AGACAAAAGCAATTAGAAAA+AGG | + | chr2_2:55423373-55423392 | Msa0258800:intron | 25.0% |
| !! | GTTTTTCTATGCATTTCAAA+TGG | + | chr2_2:55423450-55423469 | Msa0258800:intron | 25.0% |
| !! | GAAAATTAGCAAATTGCTTT+TGG | + | chr2_2:55423482-55423501 | Msa0258800:intron | 25.0% |
| !!! | ATACAAATATTTTGGTGATG+TGG | + | chr2_2:55423528-55423547 | Msa0258800:intron | 25.0% |
| !! | CATCAACAATCTATTCTTTT+TGG | + | chr2_2:55423622-55423641 | Msa0258800:intron | 25.0% |
| !!! | AAACTAAAGAGAGTTTTGTT+TGG | + | chr2_2:55423665-55423684 | Msa0258800:intron | 25.0% |
| ! | CAATAATGATGATTAACCTT+TGG | - | chr2_2:55423790-55423809 | None:intergenic | 25.0% |
| ! | TTCAGAATCAAATTCTTCTA+CGG | - | chr2_2:55423917-55423936 | None:intergenic | 25.0% |
| ! | TAGAAGAATTTGATTCTGAA+TGG | + | chr2_2:55423917-55423936 | Msa0258800:CDS | 25.0% |
| ! | AGAAGAATTTGATTCTGAAT+GGG | + | chr2_2:55423918-55423937 | Msa0258800:CDS | 25.0% |
| ! | AAGCAATGATAGATACATAT+GGG | + | chr2_2:55423941-55423960 | Msa0258800:CDS | 25.0% |
| ! | ATTCATACTTTCACTTCTTT+GGG | - | chr2_2:55424064-55424083 | None:intergenic | 25.0% |
| ! | TATTCATACTTTCACTTCTT+TGG | - | chr2_2:55424065-55424084 | None:intergenic | 25.0% |
| ! | AAGCATCAAAAGTTTATACA+AGG | + | chr2_2:55424244-55424263 | Msa0258800:CDS | 25.0% |
| GACATGGATCCTATAAATAA+CGG | + | chr2_2:55422860-55422879 | Msa0258800:CDS | 30.0% | |
| AATGGTAGTCCGTTATTTAT+AGG | - | chr2_2:55422872-55422891 | None:intergenic | 30.0% | |
| !!! | AAAGGTTTTAACTTTCGCAT+GGG | + | chr2_2:55422977-55422996 | Msa0258800:CDS | 30.0% |
| TTTGTTCAAAGGAAGAGTTT+CGG | + | chr2_2:55423050-55423069 | Msa0258800:CDS | 30.0% | |
| !! | GGGTTGTTTCAAGATTTTTA+AGG | + | chr2_2:55423176-55423195 | Msa0258800:intron | 30.0% |
| !!! | AAGACAGATGTTATTTTGCT+AGG | - | chr2_2:55423316-55423335 | None:intergenic | 30.0% |
| AATTGTCAATTGAAGAATCC+TGG | + | chr2_2:55423427-55423446 | Msa0258800:intron | 30.0% | |
| ATTGTCAATTGAAGAATCCT+GGG | + | chr2_2:55423428-55423447 | Msa0258800:intron | 30.0% | |
| !!! | TTTTTGGTTGTGCTTTGTTA+TGG | + | chr2_2:55423638-55423657 | Msa0258800:intron | 30.0% |
| !! | TTTTGGTTGTGCTTTGTTAT+GGG | + | chr2_2:55423639-55423658 | Msa0258800:intron | 30.0% |
| !!! | TGATCTGTGATAATGGTTTT+AGG | - | chr2_2:55423730-55423749 | None:intergenic | 30.0% |
| GAAGCAATGATAGATACATA+TGG | + | chr2_2:55423940-55423959 | Msa0258800:CDS | 30.0% | |
| TTTGCGAACTTTATATCCAA+TGG | + | chr2_2:55424215-55424234 | Msa0258800:CDS | 30.0% | |
| GACATGGATCCTATAAATAA+CGG | + | chr2_2:55422860-55422879 | Msa0258800:CDS | 30.0% | |
| AATGGTAGTCCGTTATTTAT+AGG | - | chr2_2:55422872-55422891 | None:intergenic | 30.0% | |
| !!! | AAAGGTTTTAACTTTCGCAT+GGG | + | chr2_2:55422977-55422996 | Msa0258800:CDS | 30.0% |
| TTTGTTCAAAGGAAGAGTTT+CGG | + | chr2_2:55423050-55423069 | Msa0258800:CDS | 30.0% | |
| !! | GGGTTGTTTCAAGATTTTTA+AGG | + | chr2_2:55423176-55423195 | Msa0258800:intron | 30.0% |
| !!! | AAGACAGATGTTATTTTGCT+AGG | - | chr2_2:55423316-55423335 | None:intergenic | 30.0% |
| AATTGTCAATTGAAGAATCC+TGG | + | chr2_2:55423427-55423446 | Msa0258800:intron | 30.0% | |
| ATTGTCAATTGAAGAATCCT+GGG | + | chr2_2:55423428-55423447 | Msa0258800:intron | 30.0% | |
| !!! | TTTTTGGTTGTGCTTTGTTA+TGG | + | chr2_2:55423638-55423657 | Msa0258800:intron | 30.0% |
| !! | TTTTGGTTGTGCTTTGTTAT+GGG | + | chr2_2:55423639-55423658 | Msa0258800:intron | 30.0% |
| !!! | TGATCTGTGATAATGGTTTT+AGG | - | chr2_2:55423730-55423749 | None:intergenic | 30.0% |
| GAAGCAATGATAGATACATA+TGG | + | chr2_2:55423940-55423959 | Msa0258800:CDS | 30.0% | |
| TTTGCGAACTTTATATCCAA+TGG | + | chr2_2:55424215-55424234 | Msa0258800:CDS | 30.0% | |
| ! | AAAAGGTACGCTAAGAACAA+AGG | + | chr2_2:55422959-55422978 | Msa0258800:CDS | 35.0% |
| !!! | CAAAGGTTTTAACTTTCGCA+TGG | + | chr2_2:55422976-55422995 | Msa0258800:CDS | 35.0% |
| CTGTTCTTGATTTAGTACCA+CGG | - | chr2_2:55423003-55423022 | None:intergenic | 35.0% | |
| GGTACTAAATCAAGAACAGA+CGG | + | chr2_2:55423004-55423023 | Msa0258800:CDS | 35.0% | |
| AGAACAGACGGAATGATAAT+TGG | + | chr2_2:55423016-55423035 | Msa0258800:CDS | 35.0% | |
| TTGTTCAAAGGAAGAGTTTC+GGG | + | chr2_2:55423051-55423070 | Msa0258800:CDS | 35.0% | |
| TCTCAGACATGATGAAACTA+GGG | + | chr2_2:55423108-55423127 | Msa0258800:CDS | 35.0% | |
| ! | TTTTCTGTCTATGTACTCGA+AGG | - | chr2_2:55423243-55423262 | None:intergenic | 35.0% |
| ATTGATGTGATGCATGATTC+TGG | + | chr2_2:55423283-55423302 | Msa0258800:intron | 35.0% | |
| TCTGTCTTATGTACGAAAAG+TGG | + | chr2_2:55423328-55423347 | Msa0258800:intron | 35.0% | |
| TGAAATGCATAGAAAAACCC+AGG | - | chr2_2:55423448-55423467 | None:intergenic | 35.0% | |
| !!! | ATTGCTTTTGGGTTGATTCA+AGG | + | chr2_2:55423494-55423513 | Msa0258800:intron | 35.0% |
| ! | GGTTGATTCAAGGTCTAAAA+TGG | + | chr2_2:55423504-55423523 | Msa0258800:intron | 35.0% |
| TGATGATTAACTCCAGTGAA+GGG | - | chr2_2:55423604-55423623 | None:intergenic | 35.0% | |
| ATGATGATTAACTCCAGTGA+AGG | - | chr2_2:55423605-55423624 | None:intergenic | 35.0% | |
| ACCATTATCACAGATCAAGA+TGG | + | chr2_2:55423733-55423752 | Msa0258800:intron | 35.0% | |
| ACCATCTTGATCTGTGATAA+TGG | - | chr2_2:55423737-55423756 | None:intergenic | 35.0% | |
| TAGACATGATTCAAGTACTC+TGG | - | chr2_2:55423838-55423857 | None:intergenic | 35.0% | |
| ATTCTTCTACGGTTGTACAT+AGG | - | chr2_2:55423906-55423925 | None:intergenic | 35.0% | |
| ! | ATGGGTTGCAAGATAATCAA+TGG | + | chr2_2:55423959-55423978 | Msa0258800:CDS | 35.0% |
| TATACTCCATTCGAGCAAAA+TGG | + | chr2_2:55423992-55424011 | Msa0258800:CDS | 35.0% | |
| AAATCATGACGTACATAAGC+AGG | - | chr2_2:55424021-55424040 | None:intergenic | 35.0% | |
| ! | TCTCTCTTTCCTTGTTGTAA+CGG | - | chr2_2:55424164-55424183 | None:intergenic | 35.0% |
| GGATATAAAGTTCGCAAAAG+TGG | - | chr2_2:55424213-55424232 | None:intergenic | 35.0% | |
| TTTGATGCTTCTTCTTCCAT+TGG | - | chr2_2:55424234-55424253 | None:intergenic | 35.0% | |
| ! | AAAAGGTACGCTAAGAACAA+AGG | + | chr2_2:55422959-55422978 | Msa0258800:CDS | 35.0% |
| !!! | CAAAGGTTTTAACTTTCGCA+TGG | + | chr2_2:55422976-55422995 | Msa0258800:CDS | 35.0% |
| CTGTTCTTGATTTAGTACCA+CGG | - | chr2_2:55423003-55423022 | None:intergenic | 35.0% | |
| GGTACTAAATCAAGAACAGA+CGG | + | chr2_2:55423004-55423023 | Msa0258800:CDS | 35.0% | |
| AGAACAGACGGAATGATAAT+TGG | + | chr2_2:55423016-55423035 | Msa0258800:CDS | 35.0% | |
| TTGTTCAAAGGAAGAGTTTC+GGG | + | chr2_2:55423051-55423070 | Msa0258800:CDS | 35.0% | |
| TCTCAGACATGATGAAACTA+GGG | + | chr2_2:55423108-55423127 | Msa0258800:CDS | 35.0% | |
| ! | TTTTCTGTCTATGTACTCGA+AGG | - | chr2_2:55423243-55423262 | None:intergenic | 35.0% |
| ATTGATGTGATGCATGATTC+TGG | + | chr2_2:55423283-55423302 | Msa0258800:intron | 35.0% | |
| TCTGTCTTATGTACGAAAAG+TGG | + | chr2_2:55423328-55423347 | Msa0258800:intron | 35.0% | |
| TGAAATGCATAGAAAAACCC+AGG | - | chr2_2:55423448-55423467 | None:intergenic | 35.0% | |
| !!! | ATTGCTTTTGGGTTGATTCA+AGG | + | chr2_2:55423494-55423513 | Msa0258800:intron | 35.0% |
| ! | GGTTGATTCAAGGTCTAAAA+TGG | + | chr2_2:55423504-55423523 | Msa0258800:intron | 35.0% |
| TGATGATTAACTCCAGTGAA+GGG | - | chr2_2:55423604-55423623 | None:intergenic | 35.0% | |
| ATGATGATTAACTCCAGTGA+AGG | - | chr2_2:55423605-55423624 | None:intergenic | 35.0% | |
| ACCATTATCACAGATCAAGA+TGG | + | chr2_2:55423733-55423752 | Msa0258800:intron | 35.0% | |
| ACCATCTTGATCTGTGATAA+TGG | - | chr2_2:55423737-55423756 | None:intergenic | 35.0% | |
| TAGACATGATTCAAGTACTC+TGG | - | chr2_2:55423838-55423857 | None:intergenic | 35.0% | |
| ATTCTTCTACGGTTGTACAT+AGG | - | chr2_2:55423906-55423925 | None:intergenic | 35.0% | |
| ! | ATGGGTTGCAAGATAATCAA+TGG | + | chr2_2:55423959-55423978 | Msa0258800:CDS | 35.0% |
| TATACTCCATTCGAGCAAAA+TGG | + | chr2_2:55423992-55424011 | Msa0258800:CDS | 35.0% | |
| AAATCATGACGTACATAAGC+AGG | - | chr2_2:55424021-55424040 | None:intergenic | 35.0% | |
| ! | TCTCTCTTTCCTTGTTGTAA+CGG | - | chr2_2:55424164-55424183 | None:intergenic | 35.0% |
| GGATATAAAGTTCGCAAAAG+TGG | - | chr2_2:55424213-55424232 | None:intergenic | 35.0% | |
| TTTGATGCTTCTTCTTCCAT+TGG | - | chr2_2:55424234-55424253 | None:intergenic | 35.0% | |
| TATGGATGAAGATTCCACCA+TGG | + | chr2_2:55422802-55422821 | Msa0258800:CDS | 40.0% | |
| TACATCATCAGAACAAGCCA+TGG | - | chr2_2:55422822-55422841 | None:intergenic | 40.0% | |
| ! | ATTCCTTCAAAGGGCTCTAA+GGG | - | chr2_2:55422902-55422921 | None:intergenic | 40.0% |
| GTGAACTCCATTCCTTCAAA+GGG | - | chr2_2:55422911-55422930 | None:intergenic | 40.0% | |
| TGTGAACTCCATTCCTTCAA+AGG | - | chr2_2:55422912-55422931 | None:intergenic | 40.0% | |
| AGGCAAGGAATCACTACAAA+AGG | + | chr2_2:55422942-55422961 | Msa0258800:CDS | 40.0% | |
| GTCTCAGACATGATGAAACT+AGG | + | chr2_2:55423107-55423126 | Msa0258800:CDS | 40.0% | |
| AGACATGATGAAACTAGGGT+AGG | + | chr2_2:55423112-55423131 | Msa0258800:intron | 40.0% | |
| ! | CGAAGGAACTGACAACTTTT+AGG | - | chr2_2:55423226-55423245 | None:intergenic | 40.0% |
| !! | GTGATGCATGATTCTGGTTT+AGG | + | chr2_2:55423289-55423308 | Msa0258800:intron | 40.0% |
| GTCTTATGTACGAAAAGTGG+TGG | + | chr2_2:55423331-55423350 | Msa0258800:intron | 40.0% | |
| GCATTTCAAATGGATGCTGA+AGG | + | chr2_2:55423460-55423479 | Msa0258800:intron | 40.0% | |
| ACTTGGTTAGAAGCAATGGA+TGG | + | chr2_2:55423697-55423716 | Msa0258800:intron | 40.0% | |
| ! | AGATGGTTCTATCACGTATG+CGG | + | chr2_2:55423750-55423769 | Msa0258800:intron | 40.0% |
| ! | AGGAATCCATTTTGCTCGAA+TGG | - | chr2_2:55424001-55424020 | None:intergenic | 40.0% |
| ! | GTACGTCATGATTTTTGTGC+TGG | + | chr2_2:55424027-55424046 | Msa0258800:CDS | 40.0% |
| CATACTTTCACTTCTTTGGG+TGG | - | chr2_2:55424061-55424080 | None:intergenic | 40.0% | |
| ! | TGTGTCACAAACTTGCTCAA+TGG | - | chr2_2:55424120-55424139 | None:intergenic | 40.0% |
| ! | CTCTCTTTCCTTGTTGTAAC+GGG | - | chr2_2:55424163-55424182 | None:intergenic | 40.0% |
| TATGGATGAAGATTCCACCA+TGG | + | chr2_2:55422802-55422821 | Msa0258800:CDS | 40.0% | |
| TACATCATCAGAACAAGCCA+TGG | - | chr2_2:55422822-55422841 | None:intergenic | 40.0% | |
| ! | ATTCCTTCAAAGGGCTCTAA+GGG | - | chr2_2:55422902-55422921 | None:intergenic | 40.0% |
| GTGAACTCCATTCCTTCAAA+GGG | - | chr2_2:55422911-55422930 | None:intergenic | 40.0% | |
| TGTGAACTCCATTCCTTCAA+AGG | - | chr2_2:55422912-55422931 | None:intergenic | 40.0% | |
| AGGCAAGGAATCACTACAAA+AGG | + | chr2_2:55422942-55422961 | Msa0258800:CDS | 40.0% | |
| GTCTCAGACATGATGAAACT+AGG | + | chr2_2:55423107-55423126 | Msa0258800:CDS | 40.0% | |
| AGACATGATGAAACTAGGGT+AGG | + | chr2_2:55423112-55423131 | Msa0258800:intron | 40.0% | |
| ! | CGAAGGAACTGACAACTTTT+AGG | - | chr2_2:55423226-55423245 | None:intergenic | 40.0% |
| !! | GTGATGCATGATTCTGGTTT+AGG | + | chr2_2:55423289-55423308 | Msa0258800:intron | 40.0% |
| GTCTTATGTACGAAAAGTGG+TGG | + | chr2_2:55423331-55423350 | Msa0258800:intron | 40.0% | |
| GCATTTCAAATGGATGCTGA+AGG | + | chr2_2:55423460-55423479 | Msa0258800:intron | 40.0% | |
| ACTTGGTTAGAAGCAATGGA+TGG | + | chr2_2:55423697-55423716 | Msa0258800:intron | 40.0% | |
| ! | AGATGGTTCTATCACGTATG+CGG | + | chr2_2:55423750-55423769 | Msa0258800:intron | 40.0% |
| ! | AGGAATCCATTTTGCTCGAA+TGG | - | chr2_2:55424001-55424020 | None:intergenic | 40.0% |
| ! | GTACGTCATGATTTTTGTGC+TGG | + | chr2_2:55424027-55424046 | Msa0258800:CDS | 40.0% |
| CATACTTTCACTTCTTTGGG+TGG | - | chr2_2:55424061-55424080 | None:intergenic | 40.0% | |
| ! | TGTGTCACAAACTTGCTCAA+TGG | - | chr2_2:55424120-55424139 | None:intergenic | 40.0% |
| ! | CTCTCTTTCCTTGTTGTAAC+GGG | - | chr2_2:55424163-55424182 | None:intergenic | 40.0% |
| ATCATCAGAACAAGCCATGG+TGG | - | chr2_2:55422819-55422838 | None:intergenic | 45.0% | |
| ATGTCAAGAGCAGCAGTTTC+AGG | - | chr2_2:55422845-55422864 | None:intergenic | 45.0% | |
| TGAAACTGCTGCTCTTGACA+TGG | + | chr2_2:55422844-55422863 | Msa0258800:CDS | 45.0% | |
| !! | TTCCTTCAAAGGGCTCTAAG+GGG | - | chr2_2:55422901-55422920 | None:intergenic | 45.0% |
| CATTCCTTCAAAGGGCTCTA+AGG | - | chr2_2:55422903-55422922 | None:intergenic | 45.0% | |
| ! | CTTAGAGCCCTTTGAAGGAA+TGG | + | chr2_2:55422901-55422920 | Msa0258800:CDS | 45.0% |
| TGAAACTAGGGTAGGATGCA+AGG | + | chr2_2:55423120-55423139 | Msa0258800:intron | 45.0% | |
| ACTCCAGTGAAGGGAACAAA+CGG | - | chr2_2:55423595-55423614 | None:intergenic | 45.0% | |
| TTGTTTGGTTGCTGCGTACT+TGG | + | chr2_2:55423680-55423699 | Msa0258800:intron | 45.0% | |
| GCGTACTTGGTTAGAAGCAA+TGG | + | chr2_2:55423693-55423712 | Msa0258800:intron | 45.0% | |
| !! | CTTGTTGTAACGGGCATCAA+GGG | - | chr2_2:55424154-55424173 | None:intergenic | 45.0% |
| ATCATCAGAACAAGCCATGG+TGG | - | chr2_2:55422819-55422838 | None:intergenic | 45.0% | |
| ATGTCAAGAGCAGCAGTTTC+AGG | - | chr2_2:55422845-55422864 | None:intergenic | 45.0% | |
| TGAAACTGCTGCTCTTGACA+TGG | + | chr2_2:55422844-55422863 | Msa0258800:CDS | 45.0% | |
| !! | TTCCTTCAAAGGGCTCTAAG+GGG | - | chr2_2:55422901-55422920 | None:intergenic | 45.0% |
| CATTCCTTCAAAGGGCTCTA+AGG | - | chr2_2:55422903-55422922 | None:intergenic | 45.0% | |
| ! | CTTAGAGCCCTTTGAAGGAA+TGG | + | chr2_2:55422901-55422920 | Msa0258800:CDS | 45.0% |
| TGAAACTAGGGTAGGATGCA+AGG | + | chr2_2:55423120-55423139 | Msa0258800:intron | 45.0% | |
| ACTCCAGTGAAGGGAACAAA+CGG | - | chr2_2:55423595-55423614 | None:intergenic | 45.0% | |
| TTGTTTGGTTGCTGCGTACT+TGG | + | chr2_2:55423680-55423699 | Msa0258800:intron | 45.0% | |
| GCGTACTTGGTTAGAAGCAA+TGG | + | chr2_2:55423693-55423712 | Msa0258800:intron | 45.0% | |
| !! | CTTGTTGTAACGGGCATCAA+GGG | - | chr2_2:55424154-55424173 | None:intergenic | 45.0% |
| !! | TCCTTCAAAGGGCTCTAAGG+GGG | - | chr2_2:55422900-55422919 | None:intergenic | 50.0% |
| GGAGTTCACATCCATCGAAG+AGG | + | chr2_2:55422922-55422941 | Msa0258800:CDS | 50.0% | |
| TCACATCCATCGAAGAGGCA+AGG | + | chr2_2:55422927-55422946 | Msa0258800:CDS | 50.0% | |
| GTGATTCCTTGCCTCTTCGA+TGG | - | chr2_2:55422936-55422955 | None:intergenic | 50.0% | |
| ! | TTTAACTTTCGCATGGGCCG+TGG | + | chr2_2:55422983-55423002 | Msa0258800:CDS | 50.0% |
| ! | ATGCCGTTTGTTCCCTTCAC+TGG | + | chr2_2:55423589-55423608 | Msa0258800:intron | 50.0% |
| !! | CCTTGTTGTAACGGGCATCA+AGG | - | chr2_2:55424155-55424174 | None:intergenic | 50.0% |
| CCTTGATGCCCGTTACAACA+AGG | + | chr2_2:55424152-55424171 | Msa0258800:CDS | 50.0% | |
| !! | TCCTTCAAAGGGCTCTAAGG+GGG | - | chr2_2:55422900-55422919 | None:intergenic | 50.0% |
| GGAGTTCACATCCATCGAAG+AGG | + | chr2_2:55422922-55422941 | Msa0258800:CDS | 50.0% | |
| TCACATCCATCGAAGAGGCA+AGG | + | chr2_2:55422927-55422946 | Msa0258800:CDS | 50.0% | |
| GTGATTCCTTGCCTCTTCGA+TGG | - | chr2_2:55422936-55422955 | None:intergenic | 50.0% | |
| ! | TTTAACTTTCGCATGGGCCG+TGG | + | chr2_2:55422983-55423002 | Msa0258800:CDS | 50.0% |
| ! | ATGCCGTTTGTTCCCTTCAC+TGG | + | chr2_2:55423589-55423608 | Msa0258800:intron | 50.0% |
| !! | CCTTGTTGTAACGGGCATCA+AGG | - | chr2_2:55424155-55424174 | None:intergenic | 50.0% |
| CCTTGATGCCCGTTACAACA+AGG | + | chr2_2:55424152-55424171 | Msa0258800:CDS | 50.0% | |
| !! | GGCTCTAAGGGGGACTCTAA+TGG | - | chr2_2:55422890-55422909 | None:intergenic | 55.0% |
| TCCCCCTTAGAGCCCTTTGA+AGG | + | chr2_2:55422896-55422915 | Msa0258800:CDS | 55.0% | |
| TATCACGTATGCGGTCGCGA+GGG | + | chr2_2:55423759-55423778 | Msa0258800:intron | 55.0% | |
| !! | GGCTCTAAGGGGGACTCTAA+TGG | - | chr2_2:55422890-55422909 | None:intergenic | 55.0% |
| TCCCCCTTAGAGCCCTTTGA+AGG | + | chr2_2:55422896-55422915 | Msa0258800:CDS | 55.0% | |
| TATCACGTATGCGGTCGCGA+GGG | + | chr2_2:55423759-55423778 | Msa0258800:intron | 55.0% | |
| CTATCACGTATGCGGTCGCG+AGG | + | chr2_2:55423758-55423777 | Msa0258800:intron | 60.0% | |
| CTATCACGTATGCGGTCGCG+AGG | + | chr2_2:55423758-55423777 | Msa0258800:intron | 60.0% | |
| !! | GGTCGCGAGGGCGTTTCCAA+AGG | + | chr2_2:55423771-55423790 | Msa0258800:intron | 65.0% |
| !! | GGTCGCGAGGGCGTTTCCAA+AGG | + | chr2_2:55423771-55423790 | Msa0258800:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 55422788 | 55424287 | 55422788 | ID=Msa0258800;Name=Msa0258800 |
| chr2_2 | mRNA | 55422788 | 55424287 | 55422788 | ID=Msa0258800-mRNA-1;Parent=Msa0258800;Name=Msa0258800-mRNA-1;_AED=0.39;_eAED=0.50;_QI=0|0|0|1|0|0|2|0|278 |
| chr2_2 | exon | 55422788 | 55423129 | 55422788 | ID=Msa0258800-mRNA-1:exon:16762;Parent=Msa0258800-mRNA-1 |
| chr2_2 | exon | 55423793 | 55424287 | 55423793 | ID=Msa0258800-mRNA-1:exon:16763;Parent=Msa0258800-mRNA-1 |
| chr2_2 | CDS | 55422788 | 55423129 | 55422788 | ID=Msa0258800-mRNA-1:cds;Parent=Msa0258800-mRNA-1 |
| chr2_2 | CDS | 55423793 | 55424287 | 55423793 | ID=Msa0258800-mRNA-1:cds;Parent=Msa0258800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
