AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0261310

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261310 MtrunA17_Chr2g0323331 66.190 420 40 9 31 403 5 369 9.75e-176 494
Msa0261310 MtrunA17_Chr2g0323351 52.792 197 72 6 1 183 58 247 7.02e-52 174
Msa0261310 MtrunA17_Chr2g0323351 57.609 92 30 4 158 245 137 223 9.99e-14 70.5
Msa0261310 MtrunA17_Chr2g0323351 42.138 159 31 7 247 400 146 248 5.22e-13 68.6
Msa0261310 MtrunA17_Chr4g0022901 39.791 191 79 4 1 156 59 248 3.31e-35 130
Msa0261310 MtrunA17_Chr4g0022931 38.249 217 98 6 1 203 59 253 7.64e-29 113
Msa0261310 MtrunA17_Chr4g0022911 46.957 115 46 1 1 115 59 158 1.02e-27 111
Msa0261310 MtrunA17_Chr1g0167691 52.632 95 37 1 1 87 58 152 3.68e-25 103
Msa0261310 MtrunA17_Chr1g0167661 56.977 86 29 1 1 78 58 143 7.14e-25 102
Msa0261310 MtrunA17_Chr4g0022881 38.125 160 84 4 1 153 58 209 2.77e-24 100
Msa0261310 MtrunA17_Chr1g0187761 37.195 164 98 3 1 160 58 220 5.73e-24 100
Msa0261310 MtrunA17_Chr4g0022891 37.427 171 78 8 1 153 58 217 2.28e-23 97.8
Msa0261310 MtrunA17_Chr7g0261281 57.143 77 28 1 2 73 59 135 4.63e-23 97.8
Msa0261310 MtrunA17_Chr7g0274581 66.129 62 21 0 1 62 58 119 5.54e-23 95.9
Msa0261310 MtrunA17_Chr1g0211161 65.574 61 21 0 1 61 59 119 9.21e-23 95.9
Msa0261310 MtrunA17_Chr4g0058631 65.574 61 21 0 1 61 58 118 2.20e-22 97.4
Msa0261310 MtrunA17_Chr4g0044421 65.574 61 21 0 1 61 58 118 4.13e-22 93.2
Msa0261310 MtrunA17_Chr5g0435101 63.934 61 22 0 1 61 57 117 6.32e-22 93.2
Msa0261310 MtrunA17_Chr8g0346561 60.000 65 26 0 1 65 58 122 8.19e-22 94.7
Msa0261310 MtrunA17_Chr3g0117091 63.934 61 22 0 1 61 58 118 8.41e-22 95.5
Msa0261310 MtrunA17_Chr1g0203441 63.934 61 22 0 1 61 59 119 1.05e-21 94.0
Msa0261310 MtrunA17_Chr4g0070611 44.643 112 50 1 1 100 58 169 2.37e-21 93.6
Msa0261310 MtrunA17_Chr1g0203411 60.606 66 26 0 1 66 58 123 2.49e-21 93.6
Msa0261310 MtrunA17_Chr4g0057031 63.333 60 22 0 2 61 59 118 3.04e-21 92.8
Msa0261310 MtrunA17_Chr7g0247131 67.241 58 19 0 2 59 25 82 3.54e-21 92.4
Msa0261310 MtrunA17_Chr1g0193371 45.045 111 43 3 1 111 58 150 3.76e-21 94.0
Msa0261310 MtrunA17_Chr4g0037141 58.333 60 25 0 1 60 58 117 4.29e-21 92.4
Msa0261310 MtrunA17_Chr2g0328771 63.077 65 23 1 1 65 66 129 7.16e-21 92.4
Msa0261310 MtrunA17_Chr8g0349261 67.797 59 19 0 2 60 61 119 7.60e-21 92.0
Msa0261310 MtrunA17_Chr3g0115821 63.333 60 22 0 2 61 59 118 8.03e-21 92.8
Msa0261310 MtrunA17_Chr4g0055981 63.793 58 21 0 1 58 101 158 8.71e-21 90.5
Msa0261310 MtrunA17_Chr4g0070641 62.712 59 22 0 1 59 58 116 8.71e-21 89.0
Msa0261310 MtrunA17_Chr7g0228891 62.712 59 22 0 1 59 58 116 1.64e-20 90.5
Msa0261310 MtrunA17_Chr7g0240821 62.712 59 22 0 1 59 47 105 1.64e-20 89.7
Msa0261310 MtrunA17_Chr2g0281071 63.333 60 22 0 2 61 60 119 2.00e-20 91.7
Msa0261310 MtrunA17_Chr4g0048511 63.333 60 22 0 2 61 60 119 2.10e-20 91.7
Msa0261310 MtrunA17_Chr4g0068061 60.000 65 26 0 1 65 58 122 2.15e-20 91.7
Msa0261310 MtrunA17_Chr7g0217741 66.667 60 20 0 2 61 59 118 2.71e-20 90.9
Msa0261310 MtrunA17_Chr4g0032401 65.079 63 21 1 1 63 63 124 3.06e-20 90.9
Msa0261310 MtrunA17_Chr3g0131121 59.322 59 24 0 1 59 58 116 3.36e-20 90.1
Msa0261310 MtrunA17_Chr2g0323411 61.667 60 23 0 2 61 59 118 3.75e-20 90.5
Msa0261310 MtrunA17_Chr4g0042671 65.000 60 21 0 2 61 59 118 3.80e-20 91.7
Msa0261310 MtrunA17_Chr5g0400821 52.113 71 33 1 1 70 59 129 3.84e-20 90.1
Msa0261310 MtrunA17_Chr3g0088461 66.102 59 20 0 1 59 68 126 4.04e-20 90.9
Msa0261310 MtrunA17_Chr1g0193801 62.712 59 22 0 1 59 58 116 4.35e-20 91.3
Msa0261310 MtrunA17_Chr7g0270891 62.712 59 22 0 1 59 58 116 5.33e-20 90.9
Msa0261310 MtrunA17_Chr7g0217221 63.934 61 22 0 2 62 59 119 6.14e-20 89.0
Msa0261310 MtrunA17_Chr5g0410961 60.000 60 24 0 2 61 59 118 6.48e-20 90.1
Msa0261310 MtrunA17_Chr6g0453471 65.000 60 21 0 2 61 59 118 7.11e-20 90.1
Msa0261310 MtrunA17_Chr3g0103281 62.069 58 22 0 2 59 59 116 1.08e-19 89.4
Msa0261310 MtrunA17_Chr1g0151941 55.556 63 28 0 1 63 59 121 1.15e-19 87.8
Msa0261310 MtrunA17_Chr7g0275911 59.322 59 24 0 1 59 58 116 1.15e-19 87.8
Msa0261310 MtrunA17_Chr3g0110351 61.667 60 23 0 2 61 59 118 1.21e-19 89.0
Msa0261310 MtrunA17_Chr1g0152011 37.615 109 65 2 1 109 59 164 1.24e-19 89.4
Msa0261310 MtrunA17_Chr5g0434571 61.667 60 23 0 2 61 95 154 1.70e-19 89.0
Msa0261310 MtrunA17_Chr2g0309911 62.712 59 22 0 2 60 58 116 1.79e-19 88.6
Msa0261310 MtrunA17_Chr1g0186061 60.345 58 23 0 1 58 66 123 1.81e-19 87.4
Msa0261310 MtrunA17_Chr4g0039971 61.667 60 23 0 2 61 60 119 1.98e-19 89.0
Msa0261310 MtrunA17_Chr6g0470971 57.377 61 26 0 1 61 60 120 2.04e-19 87.8
Msa0261310 MtrunA17_Chr3g0121241 58.333 60 25 0 1 60 88 147 2.10e-19 88.2
Msa0261310 MtrunA17_Chr8g0343831 58.065 62 26 0 1 62 54 115 2.56e-19 87.0
Msa0261310 MtrunA17_Chr5g0395281 60.000 60 24 0 2 61 59 118 3.95e-19 87.4
Msa0261310 MtrunA17_Chr8g0385321 57.627 59 25 0 1 59 58 116 5.04e-19 87.0
Msa0261310 MtrunA17_Chr8g0342541 60.000 60 24 0 1 60 58 117 5.60e-19 87.4
Msa0261310 MtrunA17_Chr8g0342481 60.000 60 24 0 1 60 59 118 5.66e-19 88.2
Msa0261310 MtrunA17_Chr8g0342521 58.333 60 25 0 1 60 58 117 7.23e-19 87.0
Msa0261310 MtrunA17_Chr3g0135311 50.617 81 39 1 1 80 59 139 9.25e-19 87.0
Msa0261310 MtrunA17_Chr3g0092401 63.333 60 22 0 2 61 60 119 1.11e-18 86.3
Msa0261310 MtrunA17_Chr7g0228231 57.895 57 24 0 1 57 60 116 1.21e-18 84.0
Msa0261310 MtrunA17_Chr1g0209661 54.286 70 31 1 1 69 73 142 1.23e-18 85.9
Msa0261310 MtrunA17_Chr1g0180391 58.621 58 24 0 1 58 65 122 1.25e-18 84.3
Msa0261310 MtrunA17_Chr1g0168661 60.345 58 23 0 1 58 67 124 1.25e-18 85.1
Msa0261310 MtrunA17_Chr5g0434901 58.929 56 23 0 1 56 19 74 1.35e-18 81.3
Msa0261310 MtrunA17_Chr1g0194951 59.322 59 24 0 1 59 58 116 1.40e-18 86.7
Msa0261310 MtrunA17_Chr1g0194301 38.938 113 51 2 1 113 79 173 1.47e-18 85.1
Msa0261310 MtrunA17_Chr8g0387421 58.065 62 26 0 1 62 58 119 1.51e-18 85.9
Msa0261310 MtrunA17_Chr2g0330041 60.000 60 24 0 1 60 58 117 1.77e-18 86.7
Msa0261310 MtrunA17_Chr8g0354661 57.895 57 24 0 2 58 84 140 2.11e-18 87.0
Msa0261310 MtrunA17_Chr8g0360111 61.818 55 21 0 1 55 71 125 3.22e-18 84.0
Msa0261310 MtrunA17_Chr4g0028311 55.000 60 27 0 1 60 59 118 5.09e-18 84.3
Msa0261310 MtrunA17_Chr4g0030881 51.562 64 31 0 1 64 60 123 6.32e-18 83.2
Msa0261310 MtrunA17_Chr6g0452271 56.667 60 26 0 2 61 59 118 8.79e-18 84.0
Msa0261310 MtrunA17_Chr5g0417821 57.377 61 26 0 1 61 53 113 9.92e-18 82.8
Msa0261310 MtrunA17_Chr5g0434931 55.000 60 27 0 1 60 81 140 1.10e-17 82.8
Msa0261310 MtrunA17_Chr2g0311221 67.925 53 17 0 1 53 60 112 1.27e-17 83.2
Msa0261310 MtrunA17_Chr4g0060721 57.812 64 27 0 2 65 60 123 1.50e-17 83.2
Msa0261310 MtrunA17_Chr6g0450101 56.140 57 25 0 1 57 60 116 1.93e-17 80.5
Msa0261310 MtrunA17_Chr7g0264641 56.667 60 26 0 1 60 59 118 2.30e-17 81.6
Msa0261310 MtrunA17_Chr1g0194291 40.708 113 49 3 1 113 67 161 2.37e-17 81.3
Msa0261310 MtrunA17_Chr7g0228991 56.667 60 26 0 1 60 75 134 3.40e-17 81.3
Msa0261310 MtrunA17_Chr3g0099131 54.386 57 26 0 2 58 88 144 3.49e-17 83.6
Msa0261310 MtrunA17_Chr7g0254411 61.667 60 23 0 2 61 59 118 5.43e-17 81.6
Msa0261310 MtrunA17_Chr3g0080861 56.140 57 25 0 2 58 84 140 5.53e-17 82.8
Msa0261310 MtrunA17_Chr5g0434911 53.333 60 28 0 1 60 67 126 5.67e-17 80.5
Msa0261310 MtrunA17_Chr6g0487491 51.471 68 25 1 1 60 59 126 6.31e-17 80.1
Msa0261310 MtrunA17_Chr5g0397231 64.706 51 18 0 1 51 58 108 9.90e-17 80.9
Msa0261310 MtrunA17_Chr6g0453211 65.385 52 18 0 2 53 59 110 1.01e-16 80.5
Msa0261310 MtrunA17_Chr5g0434831 55.000 60 27 0 1 60 53 112 1.98e-16 77.0
Msa0261310 MtrunA17_Chr7g0271241 66.667 51 17 0 1 51 58 108 2.16e-16 80.1
Msa0261310 MtrunA17_Chr2g0327821 50.000 68 31 1 1 68 52 116 2.27e-16 78.2
Msa0261310 MtrunA17_Chr7g0220341 53.333 60 28 0 1 60 73 132 5.79e-16 77.8
Msa0261310 MtrunA17_Chr5g0434841 53.333 60 28 0 1 60 66 125 9.41e-16 77.8
Msa0261310 MtrunA17_Chr2g0327351 56.604 53 23 0 1 53 59 111 1.04e-15 77.4
Msa0261310 MtrunA17_Chr1g0154031 51.613 62 30 0 2 63 123 184 1.17e-15 78.2
Msa0261310 MtrunA17_Chr4g0072751 56.604 53 23 0 1 53 59 111 2.19e-15 77.0
Msa0261310 MtrunA17_Chr7g0229101 55.357 56 25 0 1 56 18 73 3.63e-15 73.9
Msa0261310 MtrunA17_Chr2g0323321 82.857 35 6 0 1 35 57 91 5.11e-15 70.9
Msa0261310 MtrunA17_Chr7g0229131 32.624 141 75 4 1 122 18 157 6.14e-15 72.4
Msa0261310 MtrunA17_Chr3g0117511 32.704 159 77 6 2 140 227 375 8.79e-15 75.9
Msa0261310 MtrunA17_Chr4g0054391 54.902 51 23 0 1 51 59 109 1.07e-14 74.3
Msa0261310 MtrunA17_Chr2g0322521 61.404 57 22 0 2 58 76 132 1.51e-14 74.7
Msa0261310 MtrunA17_Chr4g0008551 47.619 63 33 0 2 64 82 144 1.82e-14 74.3
Msa0261310 MtrunA17_Chr6g0454921 52.632 57 27 0 2 58 59 115 2.11e-14 71.6
Msa0261310 MtrunA17_Chr3g0133601 56.140 57 25 0 2 58 81 137 3.62e-14 71.6
Msa0261310 MtrunA17_Chr5g0429661 36.134 119 50 4 2 112 166 266 4.38e-14 73.2
Msa0261310 MtrunA17_Chr3g0093811 59.574 47 19 0 13 59 40 86 4.59e-14 72.0
Msa0261310 MtrunA17_Chr2g0293911 46.667 75 39 1 1 75 70 143 6.07e-14 72.4
Msa0261310 MtrunA17_Chr4g0068921 46.667 75 39 1 1 75 70 143 7.65e-14 69.7
Msa0261310 MtrunA17_Chr7g0233061 41.667 72 41 1 2 73 222 292 1.24e-13 71.6
Msa0261310 MtrunA17_Chr5g0417621 41.096 73 43 0 2 74 178 250 1.46e-13 72.0
Msa0261310 MtrunA17_Chr4g0042501 43.478 69 39 0 2 70 149 217 1.52e-13 72.0
Msa0261310 MtrunA17_Chr4g0058991 43.478 69 38 1 2 69 253 321 2.52e-13 71.2
Msa0261310 MtrunA17_Chr8g0334881 55.172 58 25 1 1 57 56 113 2.59e-13 70.5
Msa0261310 MtrunA17_Chr7g0269831 57.627 59 25 0 1 59 58 116 2.71e-13 70.5
Msa0261310 MtrunA17_Chr5g0434871 56.818 44 19 0 17 60 2 45 2.79e-13 64.7
Msa0261310 MtrunA17_Chr1g0192411 44.828 58 32 0 1 58 58 115 2.79e-13 70.9
Msa0261310 MtrunA17_Chr6g0480581 52.632 57 27 0 1 57 47 103 1.11e-12 67.4
Msa0261310 MtrunA17_Chr5g0421201 48.000 50 26 0 13 62 15 64 1.47e-12 65.9
Msa0261310 MtrunA17_Chr4g0053431 47.368 57 30 0 2 58 49 105 2.64e-12 66.6
Msa0261310 MtrunA17_Chr5g0401731 45.614 57 31 0 2 58 59 115 5.73e-12 66.2
Msa0261310 MtrunA17_Chr7g0228531 38.525 122 56 5 2 114 264 375 1.83e-11 65.5
Msa0261310 MtrunA17_Chr4g0013361 47.619 63 31 2 1 62 56 117 2.69e-11 63.9
Msa0261310 MtrunA17_Chr7g0228401 42.254 71 38 2 2 72 323 390 3.15e-11 65.1
Msa0261310 MtrunA17_Chr3g0139671 44.828 58 32 0 2 59 129 186 3.78e-11 65.1
Msa0261310 MtrunA17_Chr5g0441131 45.614 57 30 1 2 57 56 112 4.20e-11 61.6
Msa0261310 MtrunA17_Chr7g0238631 46.552 58 31 0 2 59 157 214 5.41e-11 64.3
Msa0261310 MtrunA17_Chr1g0157731 43.103 58 33 0 2 59 135 192 8.01e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261310 AT3G23250.2 37.195 164 82 4 1 144 1 163 5.55e-27 107
Msa0261310 AT3G23250.1 37.195 164 82 4 1 144 58 220 6.56e-26 106
Msa0261310 AT5G14750.4 41.259 143 79 4 1 140 1 141 3.44e-25 100
Msa0261310 AT5G14750.2 41.259 143 79 4 1 140 1 141 3.44e-25 100
Msa0261310 AT2G31180.1 71.429 63 18 0 1 63 58 120 1.10e-24 102
Msa0261310 AT5G14750.3 40.000 145 78 4 1 140 28 168 1.94e-24 99.4
Msa0261310 AT5G14750.1 40.000 145 78 4 1 140 62 202 8.10e-24 98.6
Msa0261310 AT5G35550.2 54.217 83 38 0 2 84 64 146 3.00e-23 98.6
Msa0261310 AT5G35550.1 54.217 83 38 0 2 84 61 143 9.82e-23 97.1
Msa0261310 AT1G22640.3 61.667 60 23 0 1 60 1 60 1.32e-22 95.1
Msa0261310 AT1G16490.1 67.797 59 19 0 1 59 60 118 2.22e-22 96.3
Msa0261310 AT1G06180.1 69.492 59 18 0 1 59 58 116 3.73e-22 95.1
Msa0261310 AT1G22640.1 61.667 60 23 0 1 60 58 117 6.21e-22 94.7
Msa0261310 AT5G15310.4 68.333 60 19 0 2 61 59 118 6.96e-22 94.4
Msa0261310 AT5G15310.1 68.333 60 19 0 2 61 59 118 7.33e-22 95.9
Msa0261310 AT1G79180.1 67.213 61 20 0 1 61 60 120 7.36e-22 95.1
Msa0261310 AT5G15310.2 68.333 60 19 0 2 61 59 118 8.06e-22 95.5
Msa0261310 AT1G79180.2 66.129 62 21 0 1 62 93 154 1.19e-21 95.1
Msa0261310 AT3G12820.2 62.903 62 23 0 1 62 12 73 1.25e-21 92.0
Msa0261310 AT4G28110.1 61.667 60 23 0 2 61 59 118 1.62e-21 94.0
Msa0261310 AT4G38620.1 60.000 60 24 0 1 60 58 117 2.16e-21 93.6
Msa0261310 AT5G07700.1 47.368 114 56 2 2 115 59 168 2.66e-21 94.4
Msa0261310 AT5G07700.2 47.368 114 56 2 2 115 59 168 2.66e-21 94.4
Msa0261310 AT3G01140.2 68.333 60 19 0 2 61 59 118 3.66e-21 94.4
Msa0261310 AT3G27920.1 56.923 65 28 0 1 65 60 124 4.25e-21 91.7
Msa0261310 AT3G12820.1 62.903 62 23 0 1 62 60 121 4.48e-21 92.0
Msa0261310 AT4G09460.1 60.000 60 24 0 1 60 58 117 5.09e-21 91.7
Msa0261310 AT3G01140.1 68.333 60 19 0 2 61 102 161 5.50e-21 94.4
Msa0261310 AT5G16770.4 63.333 60 22 0 2 61 59 118 7.01e-21 93.2
Msa0261310 AT5G16770.3 63.333 60 22 0 2 61 59 118 7.01e-21 93.2
Msa0261310 AT5G40330.1 62.712 59 22 0 1 59 58 116 8.59e-21 90.5
Msa0261310 AT5G16770.1 63.333 60 22 0 2 61 59 118 8.74e-21 92.8
Msa0261310 AT5G16770.2 63.333 60 22 0 2 61 59 118 8.74e-21 92.8
Msa0261310 AT1G35515.1 58.333 60 25 0 1 60 58 117 1.09e-20 90.1
Msa0261310 AT2G16720.1 60.000 60 24 0 1 60 58 117 1.17e-20 91.3
Msa0261310 AT5G65230.1 65.000 60 21 0 2 61 59 118 1.23e-20 92.0
Msa0261310 AT5G12870.1 62.295 61 23 0 1 61 64 124 1.24e-20 91.7
Msa0261310 AT3G13540.1 54.839 62 28 0 1 62 69 130 1.66e-20 90.5
Msa0261310 AT1G74430.1 62.903 62 23 0 1 62 58 119 1.76e-20 90.9
Msa0261310 AT3G61250.1 64.407 59 21 0 2 60 59 117 1.83e-20 91.3
Msa0261310 AT5G54230.1 63.333 60 22 0 2 61 59 118 2.10e-20 91.7
Msa0261310 AT4G34990.1 56.452 62 27 0 1 62 58 119 2.50e-20 90.5
Msa0261310 AT5G26660.2 55.405 74 24 1 1 74 27 91 3.06e-20 91.3
Msa0261310 AT4G05100.1 61.667 60 23 0 2 61 60 119 3.21e-20 91.3
Msa0261310 AT5G52600.1 64.912 57 20 0 2 58 59 115 3.58e-20 88.2
Msa0261310 AT3G02940.2 61.667 60 23 0 2 61 59 118 7.40e-20 89.7
Msa0261310 AT5G06100.1 59.649 57 23 0 2 58 79 135 8.48e-20 91.3
Msa0261310 AT3G08500.1 64.407 59 21 0 1 59 76 134 8.82e-20 90.1
Msa0261310 AT5G26660.1 55.405 74 24 1 1 74 58 122 9.04e-20 90.1
Msa0261310 AT3G02940.1 61.667 60 23 0 2 61 59 118 9.26e-20 89.7
Msa0261310 AT3G02940.3 61.667 60 23 0 2 61 59 118 9.26e-20 89.7
Msa0261310 AT4G22680.1 60.000 60 24 0 2 61 59 118 1.06e-19 88.6
Msa0261310 AT5G06100.5 59.649 57 23 0 2 58 79 135 1.09e-19 91.3
Msa0261310 AT5G06100.2 59.649 57 23 0 2 58 79 135 1.09e-19 91.3
Msa0261310 AT5G06100.3 59.649 57 23 0 2 58 79 135 1.09e-19 91.3
Msa0261310 AT5G06100.4 59.649 57 23 0 2 58 79 135 1.09e-19 91.3
Msa0261310 AT4G12350.1 60.000 60 24 0 2 61 59 118 1.20e-19 89.0
Msa0261310 AT3G12720.1 58.333 60 25 0 1 60 68 127 1.60e-19 89.0
Msa0261310 AT1G56160.1 64.407 59 21 0 1 59 60 118 2.03e-19 88.2
Msa0261310 AT1G71030.2 56.667 60 26 0 2 61 13 72 2.06e-19 85.9
Msa0261310 AT4G01680.3 62.712 59 22 0 1 59 58 116 2.14e-19 87.0
Msa0261310 AT1G71030.1 56.667 60 26 0 2 61 27 86 2.61e-19 85.9
Msa0261310 AT1G66230.1 61.667 60 23 0 2 61 59 118 2.86e-19 87.8
Msa0261310 AT5G10280.1 61.667 60 23 0 2 61 59 118 3.12e-19 88.6
Msa0261310 AT5G16600.1 60.656 61 24 0 1 61 58 118 3.19e-19 88.2
Msa0261310 AT4G17785.1 55.738 61 27 0 1 61 59 119 3.65e-19 88.6
Msa0261310 AT4G17785.2 55.738 61 27 0 1 61 59 119 3.65e-19 88.6
Msa0261310 AT4G21440.1 60.000 60 24 0 2 61 59 118 3.80e-19 88.6
Msa0261310 AT1G57560.2 55.738 61 27 0 1 61 58 118 4.08e-19 87.0
Msa0261310 AT5G62320.1 40.000 105 54 1 2 106 67 162 4.11e-19 86.7
Msa0261310 AT5G61420.2 61.667 60 23 0 2 61 59 118 4.37e-19 88.6
Msa0261310 AT5G52260.1 61.290 62 24 0 1 62 58 119 4.65e-19 86.7
Msa0261310 AT1G57560.1 55.738 61 27 0 1 61 58 118 4.77e-19 87.4
Msa0261310 AT1G18570.1 63.333 60 22 0 2 61 60 119 5.30e-19 88.2
Msa0261310 AT4G01680.1 62.712 59 22 0 1 59 58 116 6.11e-19 87.8
Msa0261310 AT1G74650.1 64.407 59 21 0 2 60 59 117 6.15e-19 87.4
Msa0261310 AT3G49690.1 58.333 60 25 0 1 60 59 118 6.58e-19 87.0
Msa0261310 AT4G01680.2 62.712 59 22 0 1 59 70 128 6.76e-19 87.8
Msa0261310 AT3G01530.1 57.895 57 24 0 1 57 71 127 6.86e-19 84.7
Msa0261310 AT3G13890.2 60.000 60 24 0 1 60 58 117 8.08e-19 87.4
Msa0261310 AT5G56110.1 62.069 58 22 0 2 59 59 116 8.38e-19 87.0
Msa0261310 AT3G11440.2 56.140 57 25 0 2 58 88 144 8.40e-19 88.6
Msa0261310 AT2G32460.1 63.158 57 21 0 2 58 65 121 9.23e-19 88.6
Msa0261310 AT3G13890.1 60.000 60 24 0 1 60 67 126 9.40e-19 87.4
Msa0261310 AT3G27810.2 57.377 61 25 1 1 61 17 76 1.00e-18 83.6
Msa0261310 AT2G32460.2 63.158 57 21 0 2 58 53 109 1.00e-18 88.2
Msa0261310 AT3G11440.3 56.140 57 25 0 2 58 88 144 1.07e-18 88.6
Msa0261310 AT3G11440.4 56.140 57 25 0 2 58 88 144 1.07e-18 88.6
Msa0261310 AT3G11440.1 56.140 57 25 0 2 58 88 144 1.07e-18 88.6
Msa0261310 AT5G60890.1 62.069 58 22 0 2 59 59 116 1.10e-18 86.3
Msa0261310 AT5G49330.1 59.322 59 24 0 1 59 58 116 1.23e-18 86.7
Msa0261310 AT3G62610.1 59.322 59 24 0 1 59 58 116 1.33e-18 86.7
Msa0261310 AT5G40350.2 55.738 61 27 0 1 61 18 78 1.35e-18 83.2
Msa0261310 AT1G09540.1 44.944 89 38 1 1 89 58 135 1.44e-18 87.0
Msa0261310 AT5G07690.1 56.579 76 32 1 2 76 59 134 1.49e-18 86.7
Msa0261310 AT5G57620.1 53.125 64 30 0 1 64 59 122 1.54e-18 86.3
Msa0261310 AT5G14340.1 59.322 59 24 0 1 59 70 128 1.92e-18 85.1
Msa0261310 AT5G62470.1 42.478 113 64 1 2 113 58 170 2.22e-18 86.3
Msa0261310 AT1G34670.1 60.000 60 24 0 2 61 59 118 2.41e-18 86.3
Msa0261310 AT1G63910.1 59.016 61 25 0 1 61 58 118 2.59e-18 86.3
Msa0261310 AT5G62470.2 42.478 113 64 1 2 113 59 171 2.60e-18 85.9
Msa0261310 AT3G47600.2 61.667 60 23 0 2 61 53 112 2.76e-18 85.5
Msa0261310 AT3G27810.1 57.377 61 25 1 1 61 66 125 2.78e-18 83.6
Msa0261310 AT5G40350.1 55.738 61 27 0 1 61 63 123 3.19e-18 83.2
Msa0261310 AT2G47460.1 55.932 59 26 0 1 59 58 116 3.40e-18 85.9
Msa0261310 AT5G65790.1 55.000 60 27 0 1 60 59 118 4.42e-18 85.5
Msa0261310 AT4G37780.1 52.174 69 29 1 1 69 59 123 4.65e-18 84.7
Msa0261310 AT3G47600.1 61.667 60 23 0 2 61 59 118 5.31e-18 84.7
Msa0261310 AT3G24310.1 60.345 58 23 0 1 58 64 121 6.20e-18 83.6
Msa0261310 AT1G68320.1 56.897 58 25 0 1 58 65 122 6.65e-18 84.0
Msa0261310 AT3G28910.1 61.667 60 23 0 2 61 59 118 6.68e-18 84.3
Msa0261310 AT5G23000.1 53.333 60 28 0 1 60 59 118 7.02e-18 84.3
Msa0261310 AT4G26930.1 57.143 56 24 0 2 57 66 121 7.28e-18 85.1
Msa0261310 AT4G13480.1 60.345 58 23 0 1 58 52 109 7.52e-18 83.2
Msa0261310 AT3G46130.3 55.172 58 26 0 1 58 23 80 8.23e-18 82.4
Msa0261310 AT4G25560.1 54.839 62 28 0 1 62 56 117 8.66e-18 83.6
Msa0261310 AT5G59780.2 55.172 58 26 0 1 58 33 90 8.84e-18 82.0
Msa0261310 AT1G18710.1 57.627 59 25 0 1 59 58 116 1.07e-17 82.8
Msa0261310 AT1G48000.1 57.895 57 24 0 1 57 78 134 1.10e-17 82.4
Msa0261310 AT3G46130.4 55.172 58 26 0 1 58 33 90 1.13e-17 82.0
Msa0261310 AT1G74080.1 60.000 60 24 0 2 61 59 118 1.15e-17 84.0
Msa0261310 AT3G30210.1 38.129 139 57 3 1 126 73 195 1.28e-17 82.8
Msa0261310 AT5G59780.3 55.172 58 26 0 1 58 54 111 1.42e-17 82.0
Msa0261310 AT5G55020.1 53.226 62 29 0 2 63 73 134 1.53e-17 84.7
Msa0261310 AT2G47190.1 37.795 127 59 4 1 127 66 172 1.66e-17 82.4
Msa0261310 AT3G46130.1 55.172 58 26 0 1 58 55 112 1.86e-17 82.0
Msa0261310 AT1G25340.2 44.944 89 38 2 1 89 59 136 1.99e-17 82.4
Msa0261310 AT1G08810.1 57.353 68 29 0 2 69 59 126 2.08e-17 82.4
Msa0261310 AT1G25340.1 44.944 89 38 2 1 89 64 141 2.49e-17 82.0
Msa0261310 AT1G25340.3 44.944 89 38 2 1 89 59 136 3.78e-17 82.0
Msa0261310 AT3G48920.1 57.895 57 24 0 1 57 64 120 4.56e-17 80.9
Msa0261310 AT2G36890.1 55.000 60 27 0 1 60 59 118 1.12e-16 80.5
Msa0261310 AT3G53200.2 56.897 58 25 0 1 58 22 79 1.14e-16 78.6
Msa0261310 AT2G36890.2 55.000 60 27 0 1 60 100 159 1.93e-16 80.5
Msa0261310 AT3G53200.1 56.897 58 25 0 1 58 55 112 2.36e-16 78.6
Msa0261310 AT3G28470.1 61.538 52 20 0 2 53 59 110 6.54e-16 78.6
Msa0261310 AT1G66370.1 53.448 58 27 0 1 58 54 111 6.70e-16 77.4
Msa0261310 AT2G26960.1 54.386 57 26 0 1 57 66 122 2.39e-15 77.8
Msa0261310 AT5G40360.1 48.485 66 32 1 2 67 202 265 2.97e-15 77.0
Msa0261310 AT3G27785.1 46.154 65 35 0 2 66 233 297 1.49e-14 75.5
Msa0261310 AT1G66380.3 50.725 69 34 0 1 69 21 89 1.54e-14 69.7
Msa0261310 AT3G09230.1 50.769 65 32 0 2 66 99 163 2.53e-14 74.3
Msa0261310 AT2G25230.1 49.254 67 29 2 2 68 70 131 4.10e-14 72.0
Msa0261310 AT4G18770.1 43.478 69 38 1 2 69 261 329 4.22e-14 73.9
Msa0261310 AT3G06490.1 46.667 75 39 1 1 75 65 138 1.22e-13 71.6
Msa0261310 AT5G11050.1 32.624 141 87 3 2 137 149 286 1.30e-13 72.4
Msa0261310 AT1G69560.2 28.188 149 82 1 2 125 167 315 1.84e-13 71.6
Msa0261310 AT1G69560.1 28.188 149 82 1 2 125 151 299 1.87e-13 71.2
Msa0261310 AT5G49620.1 46.667 75 39 1 1 75 72 145 2.01e-13 70.9
Msa0261310 AT4G25560.2 58.696 46 19 0 16 61 5 50 3.50e-13 68.9
Msa0261310 AT1G26780.2 42.029 69 40 0 2 70 142 210 6.40e-13 70.1
Msa0261310 AT5G58850.1 37.179 78 42 1 2 79 149 219 7.80e-13 70.1
Msa0261310 AT1G66380.1 51.515 66 32 0 1 66 54 119 8.40e-13 65.9
Msa0261310 AT5G59780.1 58.140 43 18 0 16 58 4 46 9.10e-13 66.6
Msa0261310 AT1G17950.1 46.575 73 30 1 1 73 48 111 9.43e-13 68.2
Msa0261310 AT1G26780.1 42.029 69 40 0 2 70 142 210 9.54e-13 68.6
Msa0261310 AT2G26950.1 50.980 51 25 0 1 51 62 112 1.04e-12 69.3
Msa0261310 AT3G46130.2 58.140 43 18 0 16 58 4 46 1.47e-12 66.6
Msa0261310 AT3G55730.1 48.276 58 30 0 2 59 100 157 4.60e-12 67.8
Msa0261310 AT5G40430.1 44.118 68 33 2 2 69 97 159 5.64e-12 65.9
Msa0261310 AT5G11510.3 44.828 58 32 0 2 59 125 182 6.45e-12 68.2
Msa0261310 AT5G11510.1 44.828 58 32 0 2 59 125 182 6.45e-12 68.2
Msa0261310 AT5G11510.4 44.828 58 32 0 2 59 125 182 6.45e-12 68.2
Msa0261310 AT4G37260.1 47.368 57 30 0 2 58 57 113 6.55e-12 66.6
Msa0261310 AT5G11510.2 44.828 58 32 0 2 59 125 182 6.94e-12 67.8
Msa0261310 AT4G33450.1 48.438 64 33 0 2 65 63 126 6.94e-12 65.5
Msa0261310 AT5G11510.5 44.828 58 32 0 2 59 125 182 7.02e-12 67.8
Msa0261310 AT2G39880.1 49.123 57 29 0 2 58 94 150 7.10e-12 67.0
Msa0261310 AT1G56650.1 48.571 70 36 0 1 70 54 123 8.33e-12 65.5
Msa0261310 AT1G66390.1 53.448 58 27 0 1 58 54 111 1.58e-11 64.7
Msa0261310 AT3G60460.1 50.000 58 28 1 1 57 57 114 1.87e-11 65.1
Msa0261310 AT2G37630.1 35.106 94 49 2 2 95 51 132 2.39e-11 65.1
Msa0261310 AT5G67300.1 47.368 57 30 0 2 58 50 106 4.97e-11 63.9
Msa0261310 AT5G02320.1 44.828 58 32 0 2 59 171 228 8.05e-11 64.3
Msa0261310 AT5G02320.2 44.828 58 32 0 2 59 171 228 8.05e-11 64.3
Msa0261310 AT2G23290.1 45.614 57 31 0 2 58 57 113 9.03e-11 63.2

Find 96 sgRNAs with CRISPR-Local

Find 318 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGAATAATTATCTTTA+TGG 0.087497 2_2:-59607024 None:intergenic
TAAAACTCCTTCAAATTTAT+TGG 0.117024 2_2:-59611115 None:intergenic
TAAAACTCCTTCAAGTTTAT+TGG 0.126920 2_2:-59611592 None:intergenic
AGGATTTGAGTGAGAATTTC+TGG 0.155231 2_2:+59611769 Msa0261310:CDS
TGAAAATGACATTCCTTTAA+TGG 0.172870 2_2:+59611890 Msa0261310:CDS
AACTCCTCCTTCAAGTTTCT+TGG 0.185570 2_2:-59611352 None:intergenic
CTGTGTACGATGTAGAATTT+TGG 0.200461 2_2:+59612030 Msa0261310:CDS
GATATTTGATTTGCAATATT+AGG 0.201381 2_2:-59611153 None:intergenic
ATGAATAATGCATCCATTAA+AGG 0.202446 2_2:-59611903 None:intergenic
TTTCCATTGTAAGGTGATTA+TGG 0.216947 2_2:-59611827 None:intergenic
ATTATTTGAATTTGAATCTT+TGG 0.220751 2_2:-59611073 None:intergenic
TATGAATTGTTTACCATATA+TGG 0.227238 2_2:-59611297 None:intergenic
TATACGATACCTGCAAATTT+AGG 0.256637 2_2:-59606786 None:intergenic
TTATTGGCTTCTTCCAATAT+AGG 0.256671 2_2:-59611099 None:intergenic
ATGAATAATGCATCCATAAA+AGG 0.286876 2_2:-59611513 None:intergenic
TTCAAATAATCACCCTATAT+TGG 0.288064 2_2:+59611086 Msa0261310:CDS
GACAATCGACTTGCAATATT+AGG 0.293210 2_2:-59611627 None:intergenic
CGTGATTGCTTCAAATTTAC+CGG 0.299900 2_2:+59610957 Msa0261310:CDS
TACTACTACCACCAAATTCT+TGG 0.300654 2_2:-59606611 None:intergenic
TATTGGCTTCTTCCAATATA+GGG 0.314144 2_2:-59611098 None:intergenic
ACAGGCACACACCAAGAATT+TGG 0.315908 2_2:+59606600 None:intergenic
GTGATTCTTTACCTCATTAT+CGG 0.317179 2_2:-59610986 None:intergenic
TTTAATGGATGCATTATTCA+TGG 0.332906 2_2:+59611905 Msa0261310:CDS
TAACAATTTATTCTGCAATA+TGG 0.335714 2_2:-59612055 None:intergenic
TGTGAACTGTCTATCATATA+AGG 0.339402 2_2:-59611798 None:intergenic
AGTTTCTTGGTTTCTTCCAT+TGG 0.347866 2_2:-59611339 None:intergenic
TAGAAAGTGTCTATCATATA+TGG 0.352614 2_2:-59611567 None:intergenic
ATTGCTTATGTTACTAGGTA+TGG 0.365953 2_2:+59606741 Msa0261310:five_prime_UTR
CTAGGTATGGCTGTTGGAAT+TGG 0.368638 2_2:+59606754 Msa0261310:five_prime_UTR
CGACAACTACCTAAATTTGC+AGG 0.368724 2_2:+59606777 Msa0261310:five_prime_UTR
TCCATTGGAGGGTGATTATG+AGG 0.370095 2_2:-59611324 None:intergenic
TAATAAATAATTACATCAAA+AGG 0.371613 2_2:-59612148 None:intergenic
AGATAGTGAACTCGTAATAT+TGG 0.395570 2_2:-59611394 None:intergenic
TTCTATGCCAATAAACTTGA+AGG 0.399423 2_2:+59611585 Msa0261310:CDS
AGTTGATTGCTTATGTTACT+AGG 0.399699 2_2:+59606736 Msa0261310:five_prime_UTR
GCAGTATCCTGGAGTTCTGT+TGG 0.399944 2_2:-59606991 None:intergenic
AGAACCCCTTGTGACAATAA+TGG 0.416910 2_2:+59606675 Msa0261310:five_prime_UTR
GAGAATTCTTTGCAGTATCC+TGG 0.427022 2_2:-59607002 None:intergenic
TTCTTGGTTTCTTCCATTGG+AGG 0.432245 2_2:-59611336 None:intergenic
AGGTCATTGTCATCAAGAAT+TGG 0.433113 2_2:-59611723 None:intergenic
GAAGAAGCCAATAAATTTGA+AGG 0.437102 2_2:+59611108 Msa0261310:CDS
CTTTATAAAACGCTTCTTCA+AGG 0.438316 2_2:-59611019 None:intergenic
GACAATAATGGATTGAGAAA+AGG 0.457500 2_2:+59606687 Msa0261310:five_prime_UTR
GAAGAAACCAAGAAACTTGA+AGG 0.464715 2_2:+59611345 Msa0261310:CDS
CTCAATCCATTATTGTCACA+AGG 0.493237 2_2:-59606681 None:intergenic
AATAAATAATTACATCAAAA+GGG 0.498178 2_2:-59612147 None:intergenic
TCTTGGTTTCTTCCATTGGA+GGG 0.502044 2_2:-59611335 None:intergenic
CTGAGGCCAAATATCAAAAG+AGG 0.509978 2_2:+59607184 Msa0261310:CDS
CTTTGTTCCAACAGAACTCC+AGG 0.512379 2_2:+59606984 Msa0261310:five_prime_UTR
CAAGAGAATCCGCTTGAAGA+TGG 0.512963 2_2:-59611423 None:intergenic
AGACTGCGAATGAGAATGAT+TGG 0.514154 2_2:+59611928 Msa0261310:CDS
AATAGTGTAGCTTCTTCAGT+TGG 0.519397 2_2:-59611972 None:intergenic
AGTGTAGCTTCTTCAGTTGG+AGG 0.523199 2_2:-59611969 None:intergenic
CAAGACAAATCGCTTGAAGC+TGG 0.530400 2_2:-59611183 None:intergenic
CGATTTGTCTTGCATAACAA+TGG 0.536383 2_2:+59611194 Msa0261310:CDS
TCATGTTCACATGACTCTGC+AGG 0.537140 2_2:-59611996 None:intergenic
GTTCTCACCATGGTCTCTAA+AGG 0.539675 2_2:-59606657 None:intergenic
TGTATGTTTCCATAAAAGAA+AGG 0.541995 2_2:-59611242 None:intergenic
ATGTTACTAGGTATGGCTGT+TGG 0.545648 2_2:+59606748 Msa0261310:five_prime_UTR
TGAATGCATCCATAAAATGA+AGG 0.545826 2_2:-59611743 None:intergenic
ACCTCATTATCGGTTCTCCC+CGG 0.550386 2_2:-59610976 None:intergenic
TGGATTCTCATATGATATTG+TGG 0.550630 2_2:-59611703 None:intergenic
GTGGGAAGAGCTGTAGACTA+AGG 0.551758 2_2:+59607149 Msa0261310:five_prime_UTR
TCACCATGGTCTCTAAAGGC+TGG 0.553133 2_2:-59606653 None:intergenic
TTTCAGGGCTTGAAAGGTGT+GGG 0.557460 2_2:+59607131 Msa0261310:intron
CAATCCATTATTGTCACAAG+GGG 0.566200 2_2:-59606679 None:intergenic
GTGATTGCTTCAAATTTACC+GGG 0.570836 2_2:+59610958 Msa0261310:CDS
CAAGAGAATGCACTTGAAGA+TGG 0.571011 2_2:-59611657 None:intergenic
AAGAATATTAAGTCTAAGCG+TGG 0.575339 2_2:+59611039 Msa0261310:CDS
ATGGATTGAGAAAAGGCACT+TGG 0.575990 2_2:+59606694 Msa0261310:five_prime_UTR
ATAATGAGGTAAAGAATCAC+TGG 0.577807 2_2:+59610989 Msa0261310:CDS
AATAAATTGTTACAGTAATG+TGG 0.582157 2_2:+59612066 Msa0261310:exon
GTGTAGCTTCTTCAGTTGGA+GGG 0.583237 2_2:-59611968 None:intergenic
ACCGGGGAGAACCGATAATG+AGG 0.590459 2_2:+59610975 Msa0261310:CDS
CGGTAAATTTGAAGCAATCA+CGG 0.592595 2_2:-59610956 None:intergenic
CCCTCATAATCACCCTCCAA+TGG 0.596454 2_2:+59611323 Msa0261310:CDS
TCAATCCATTATTGTCACAA+GGG 0.597815 2_2:-59606680 None:intergenic
GGCACACACCAAGAATTTGG+TGG 0.600882 2_2:+59606603 None:intergenic
GTCACAAGGGGTTCTCACCA+TGG 0.605010 2_2:-59606667 None:intergenic
TCTTCGCAACCATCTTCAAG+CGG 0.608733 2_2:+59611414 Msa0261310:CDS
TGCATTCTCTTGCATAACAG+TGG 0.611474 2_2:+59611668 Msa0261310:CDS
ATTAGAGTGTATTCTCTACA+TGG 0.614083 2_2:-59612110 None:intergenic
CTACCAGCCTTTAGAGACCA+TGG 0.614533 2_2:+59606650 Msa0261310:five_prime_UTR
AAATTGTTACAGTAATGTGG+TGG 0.619035 2_2:+59612069 Msa0261310:exon
TGAGGCCAAATATCAAAAGA+GGG 0.619320 2_2:+59607185 Msa0261310:CDS
TAAGGTGGATGAACTATCTG+AGG 0.621739 2_2:+59607167 Msa0261310:exon
CCATTGGAGGGTGATTATGA+GGG 0.621896 2_2:-59611323 None:intergenic
CCATTGTAAGGTGATTATGG+AGG 0.622467 2_2:-59611824 None:intergenic
CCTCCATAATCACCTTACAA+TGG 0.623207 2_2:+59611824 Msa0261310:CDS
AAAAGGCACTTGGACTCATG+AGG 0.629560 2_2:+59606704 Msa0261310:five_prime_UTR
AGGGAACTTTAATCAACAAG+AGG 0.630408 2_2:+59607204 Msa0261310:CDS
ATAATGCATCCATAAAAGGA+AGG 0.636763 2_2:-59611509 None:intergenic
ATATTAAGTCTAAGCGTGGA+AGG 0.639098 2_2:+59611043 Msa0261310:CDS
GGAAGAGCTGTAGACTAAGG+TGG 0.649277 2_2:+59607152 Msa0261310:five_prime_UTR
GAAACCAAGAAACTTGAAGG+AGG 0.677353 2_2:+59611348 Msa0261310:CDS
TGATTGCTTCAAATTTACCG+GGG 0.729789 2_2:+59610959 Msa0261310:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTTAAATTAATTTAA+GGG - chr2_2:59610199-59610218 None:intergenic 0.0%
!!! TATTAATATTTTAAATTATT+AGG + chr2_2:59610877-59610896 Msa0261310:intron 0.0%
!! ATTAAGAATAATTATCTTTA+TGG - chr2_2:59607027-59607046 None:intergenic 10.0%
!! TTAATAATTAATGTGTAAAT+TGG + chr2_2:59607042-59607061 Msa0261310:intron 10.0%
!! AAAAAAAAATAATTCATTGT+TGG - chr2_2:59607473-59607492 None:intergenic 10.0%
!! ACTAATATAATATTGTAAAT+AGG - chr2_2:59608163-59608182 None:intergenic 10.0%
!!! TTTAATATAACTTTACTTTT+AGG + chr2_2:59608208-59608227 Msa0261310:intron 10.0%
!!! TATGTTTTTTTATTTTTTGT+TGG + chr2_2:59609148-59609167 Msa0261310:intron 10.0%
!! TTAAAAGTCAAAAAAAATTT+CGG + chr2_2:59609415-59609434 Msa0261310:intron 10.0%
!!! AATTAAAACTGAAAAATTTT+CGG + chr2_2:59609451-59609470 Msa0261310:intron 10.0%
!! AAAAAATCGTAAAAAAAATT+CGG + chr2_2:59609475-59609494 Msa0261310:intron 10.0%
!! AAATTTGAAAAAAAAATCAT+AGG + chr2_2:59610621-59610640 Msa0261310:intron 10.0%
!! AATTTGAAAAAAAAATCATA+GGG + chr2_2:59610622-59610641 Msa0261310:intron 10.0%
!! AATAAATAATTACATCAAAA+GGG - chr2_2:59612150-59612169 None:intergenic 10.0%
!! TAATAAATAATTACATCAAA+AGG - chr2_2:59612151-59612170 None:intergenic 10.0%
!!! TTATTTATTATTTTTGTATG+AGG + chr2_2:59612161-59612180 Msa0261310:three_prime_UTR 10.0%
!!! ATAATATCATAATTTTTCGT+TGG + chr2_2:59606825-59606844 Msa0261310:intron 15.0%
!!! TTTTAAATTAATTTTCTCAC+AGG + chr2_2:59606958-59606977 Msa0261310:intron 15.0%
!!! AATAAATTAACATACTTTTG+TGG + chr2_2:59607342-59607361 Msa0261310:intron 15.0%
!!! ATTTTGTGTATTTTTATTCA+AGG + chr2_2:59608055-59608074 Msa0261310:intron 15.0%
!! TTGCATATATTTAATTAGTT+TGG + chr2_2:59608907-59608926 Msa0261310:intron 15.0%
!!! AGTTTGTTTAGTTAATTTTT+AGG + chr2_2:59609058-59609077 Msa0261310:intron 15.0%
!!! GTTTGTTTAGTTAATTTTTA+GGG + chr2_2:59609059-59609078 Msa0261310:intron 15.0%
!!! ATTAAAACTGAAAAATTTTC+GGG + chr2_2:59609452-59609471 Msa0261310:intron 15.0%
!! AAAAATCGTAAAAAAAATTC+GGG + chr2_2:59609476-59609495 Msa0261310:intron 15.0%
!!! AAAAACTGAATTTTTTTTGA+AGG + chr2_2:59609500-59609519 Msa0261310:intron 15.0%
!! AAAAACAAAAAAAATAAGCA+AGG + chr2_2:59609528-59609547 Msa0261310:intron 15.0%
!! AAAACAAAAAAAATAAGCAA+GGG + chr2_2:59609529-59609548 Msa0261310:intron 15.0%
!! AGAATATATATAAAAGTGAA+TGG - chr2_2:59609851-59609870 None:intergenic 15.0%
!!! CAAATTTGAAATTGTTTATT+TGG - chr2_2:59610608-59610627 None:intergenic 15.0%
!! ATTTGAAAAAAAAATCATAG+GGG + chr2_2:59610623-59610642 Msa0261310:intron 15.0%
!! TGGATAAAGTTAAAATTATA+AGG + chr2_2:59610818-59610837 Msa0261310:intron 15.0%
!! ATTATTTGAATTTGAATCTT+TGG - chr2_2:59611076-59611095 None:intergenic 15.0%
!! ATGTTAATTTATTCTCTTTG+AGG - chr2_2:59607335-59607354 None:intergenic 20.0%
!!! TGAAATGTTTCTATATATGA+AGG - chr2_2:59607382-59607401 None:intergenic 20.0%
!!! ACTCATGAAACTTATATTTT+TGG + chr2_2:59607996-59608015 Msa0261310:intron 20.0%
!!! TATATTTTTGGATTGTTTGT+TGG + chr2_2:59608008-59608027 Msa0261310:intron 20.0%
!!! TTGAATATTACGCTTTATTT+TGG + chr2_2:59608078-59608097 Msa0261310:intron 20.0%
!! TTATTATCAAACAATTGGTT+CGG - chr2_2:59608459-59608478 None:intergenic 20.0%
!! CAATCTTATTATCAAACAAT+TGG - chr2_2:59608464-59608483 None:intergenic 20.0%
!! ACTAACTTACAAACATAAAA+GGG - chr2_2:59608502-59608521 None:intergenic 20.0%
!! TACTAACTTACAAACATAAA+AGG - chr2_2:59608503-59608522 None:intergenic 20.0%
!!! ATTGATTCTTTTGGATAATT+TGG + chr2_2:59608540-59608559 Msa0261310:intron 20.0%
!!! ATTTTTCACAAACACATTAT+GGG - chr2_2:59608581-59608600 None:intergenic 20.0%
!! AATCAATTGATTATTCTCTT+TGG + chr2_2:59608673-59608692 Msa0261310:intron 20.0%
!!! CTATATTTGTTCTTCTATTT+TGG + chr2_2:59608884-59608903 Msa0261310:intron 20.0%
!!! TTTATTTTTTGTTGGCTTAA+TGG + chr2_2:59609156-59609175 Msa0261310:intron 20.0%
!! TAAATGATTAAACTTTGCAA+GGG - chr2_2:59609629-59609648 None:intergenic 20.0%
!! TTAAATGATTAAACTTTGCA+AGG - chr2_2:59609628-59609647 None:intergenic 20.0%
!! AAACAAAAAAAATAAGCAAG+GGG + chr2_2:59609530-59609549 Msa0261310:intron 20.0%
!! TTAAATGATTAAACTTTGCA+AGG + chr2_2:59609628-59609647 Msa0261310:intron 20.0%
!! TAAATGATTAAACTTTGCAA+GGG + chr2_2:59609629-59609648 Msa0261310:intron 20.0%
!! AAATGGCATAATATATCAAA+AGG - chr2_2:59609881-59609900 None:intergenic 20.0%
!!! ATTATGCCATTTGATATTAT+TGG + chr2_2:59609889-59609908 Msa0261310:intron 20.0%
!! GTTAGATAACAAATAAATCT+TGG - chr2_2:59610053-59610072 None:intergenic 20.0%
!!! TTGTTTGTTATATTCAACAT+CGG - chr2_2:59610087-59610106 None:intergenic 20.0%
!! AGATAAGCAAAATAAAGTTA+TGG + chr2_2:59610672-59610691 Msa0261310:intron 20.0%
!! TAAATAGAATTCTCTTACAA+AGG - chr2_2:59610728-59610747 None:intergenic 20.0%
!! TAAAACTCCTTCAAATTTAT+TGG - chr2_2:59611118-59611137 None:intergenic 20.0%
!!! GATATTTGATTTGCAATATT+AGG - chr2_2:59611156-59611175 None:intergenic 20.0%
!!! ACAATTTTTGTGAGAATTTT+TGG + chr2_2:59611268-59611287 Msa0261310:CDS 20.0%
!! TATGAATTGTTTACCATATA+TGG - chr2_2:59611300-59611319 None:intergenic 20.0%
!! TAACAATTTATTCTGCAATA+TGG - chr2_2:59612058-59612077 None:intergenic 20.0%
!! AATAAATTGTTACAGTAATG+TGG + chr2_2:59612066-59612085 Msa0261310:exon 20.0%
!! ATCATAATTTTTCGTTGGAT+AGG + chr2_2:59606830-59606849 Msa0261310:intron 25.0%
! ATCAAACTTCATGAAAAACT+GGG + chr2_2:59607238-59607257 Msa0261310:CDS 25.0%
! TGTGTTCATAAAAAATCCAT+GGG - chr2_2:59607303-59607322 None:intergenic 25.0%
! TTGTGTTCATAAAAAATCCA+TGG - chr2_2:59607304-59607323 None:intergenic 25.0%
!!! AAACATTTGCTATTTAAGAG+AGG - chr2_2:59607541-59607560 None:intergenic 25.0%
! AGACATACACTATACATATT+TGG - chr2_2:59607572-59607591 None:intergenic 25.0%
!! TAAGTTTGTTTGTTCAAAGT+GGG - chr2_2:59607615-59607634 None:intergenic 25.0%
!!! TTATAAAAGAGCCTTTTTTG+TGG + chr2_2:59607797-59607816 Msa0261310:intron 25.0%
!! TGGATGATTTTATGATTATG+TGG + chr2_2:59608028-59608047 Msa0261310:intron 25.0%
!! GGATGATTTTATGATTATGT+GGG + chr2_2:59608029-59608048 Msa0261310:intron 25.0%
! TTTATGAGTAGATTTCTTCT+AGG + chr2_2:59608259-59608278 Msa0261310:intron 25.0%
!!! AAGTACTCTATTGATTCTTT+TGG + chr2_2:59608531-59608550 Msa0261310:intron 25.0%
!! GATTTTTCACAAACACATTA+TGG - chr2_2:59608582-59608601 None:intergenic 25.0%
! ATTCAAATATGTCTTCAACA+AGG - chr2_2:59608604-59608623 None:intergenic 25.0%
! TGAAAAAAAAAATTAGCCCA+GGG - chr2_2:59609351-59609370 None:intergenic 25.0%
! TTGAAAAAAAAAATTAGCCC+AGG - chr2_2:59609352-59609371 None:intergenic 25.0%
! ACGTCATCAAATTAACAAAA+TGG - chr2_2:59609576-59609595 None:intergenic 25.0%
!!! ATTTTGTTAATTTGATGACG+TGG + chr2_2:59609575-59609594 Msa0261310:intron 25.0%
! AGAGTTCCAATAATATCAAA+TGG - chr2_2:59609898-59609917 None:intergenic 25.0%
!! AAATAGAGAAATTTTGCAAG+AGG - chr2_2:59609964-59609983 None:intergenic 25.0%
!! AATTTCTCTATTTGTTAGAG+AGG + chr2_2:59609971-59609990 Msa0261310:intron 25.0%
! ACAAACAAAACATTCACATT+TGG + chr2_2:59610099-59610118 Msa0261310:intron 25.0%
!!! GTGAAAACACTTTTTTTTGA+AGG - chr2_2:59610856-59610875 None:intergenic 25.0%
! AATGATTTATAAAGTGCAGA+TGG + chr2_2:59610932-59610951 Msa0261310:intron 25.0%
! TTCAAATAATCACCCTATAT+TGG + chr2_2:59611086-59611105 Msa0261310:CDS 25.0%
! TGTATGTTTCCATAAAAGAA+AGG - chr2_2:59611245-59611264 None:intergenic 25.0%
!! TTCTTTTATGGAAACATACA+TGG + chr2_2:59611245-59611264 Msa0261310:CDS 25.0%
!! TGAATTTTCATGTGATATAG+TGG - chr2_2:59611472-59611491 None:intergenic 25.0%
!! CATGAAAATTCAGTTTTTGA+TGG + chr2_2:59611480-59611499 Msa0261310:CDS 25.0%
! ATGAATAATGCATCCATAAA+AGG - chr2_2:59611516-59611535 None:intergenic 25.0%
!! TTTTATGGATGCATTATTCA+TGG + chr2_2:59611515-59611534 Msa0261310:CDS 25.0%
!!! TAGAAAGTGTCTATCATATA+TGG - chr2_2:59611570-59611589 None:intergenic 25.0%
!! AAGTAACATTTTCCATTGTA+AGG - chr2_2:59611839-59611858 None:intergenic 25.0%
!! AAAATTTTCATGTGATGTTG+TGG - chr2_2:59611862-59611881 None:intergenic 25.0%
! TGAAAATGACATTCCTTTAA+TGG + chr2_2:59611890-59611909 Msa0261310:CDS 25.0%
! ATGAATAATGCATCCATTAA+AGG - chr2_2:59611906-59611925 None:intergenic 25.0%
!! TTTAATGGATGCATTATTCA+TGG + chr2_2:59611905-59611924 Msa0261310:CDS 25.0%
!!! ATTATTTTTGTATGAGGTGT+CGG + chr2_2:59612167-59612186 Msa0261310:three_prime_UTR 25.0%
TCAATCCATTATTGTCACAA+GGG - chr2_2:59606683-59606702 None:intergenic 30.0%
!! GACAATAATGGATTGAGAAA+AGG + chr2_2:59606687-59606706 Msa0261310:five_prime_UTR 30.0%
AGTTGATTGCTTATGTTACT+AGG + chr2_2:59606736-59606755 Msa0261310:five_prime_UTR 30.0%
ATTGCTTATGTTACTAGGTA+TGG + chr2_2:59606741-59606760 Msa0261310:five_prime_UTR 30.0%
TATACGATACCTGCAAATTT+AGG - chr2_2:59606789-59606808 None:intergenic 30.0%
AACATACGACATTGAATGAT+TGG - chr2_2:59606881-59606900 None:intergenic 30.0%
AACAATTCTCTCGAGTTTAA+AGG - chr2_2:59607112-59607131 None:intergenic 30.0%
! AAGTTCCCTCTTTTGATATT+TGG - chr2_2:59607193-59607212 None:intergenic 30.0%
CATCAAACTTCATGAAAAAC+TGG + chr2_2:59607237-59607256 Msa0261310:CDS 30.0%
TTCATGAAAAACTGGGTAAT+AGG + chr2_2:59607245-59607264 Msa0261310:CDS 30.0%
AACATATCAACACTCTATCA+TGG + chr2_2:59607272-59607291 Msa0261310:intron 30.0%
TCATAAAAAATCCATGGGTT+AGG - chr2_2:59607298-59607317 None:intergenic 30.0%
TTTCTATATATGAAGGCAAG+AGG - chr2_2:59607375-59607394 None:intergenic 30.0%
! TTGTTGGCTGATAACAATTT+CGG - chr2_2:59607457-59607476 None:intergenic 30.0%
! AAGTTTGTTTGTTCAAAGTG+GGG - chr2_2:59607614-59607633 None:intergenic 30.0%
! CTAAGTTTGTTTGTTCAAAG+TGG - chr2_2:59607616-59607635 None:intergenic 30.0%
GAAAAATTGGACCACAAAAA+AGG - chr2_2:59607811-59607830 None:intergenic 30.0%
TCGGAAAGAAGAAGAAAAAT+TGG - chr2_2:59607824-59607843 None:intergenic 30.0%
TCACAATAATGTGTTTGGTT+CGG - chr2_2:59607928-59607947 None:intergenic 30.0%
CCAATTCACAATAATGTGTT+TGG - chr2_2:59607933-59607952 None:intergenic 30.0%
CCAAACACATTATTGTGAAT+TGG + chr2_2:59607930-59607949 Msa0261310:intron 30.0%
GCTAACAATGATACAAATCA+AGG - chr2_2:59608320-59608339 None:intergenic 30.0%
TAAGATTGAGCTTATGCTAT+TGG + chr2_2:59608476-59608495 Msa0261310:intron 30.0%
ATTAACAAAGAGAGAAACCA+AGG - chr2_2:59608656-59608675 None:intergenic 30.0%
CTAATCTTTCTTCTCAATGT+TGG + chr2_2:59608712-59608731 Msa0261310:intron 30.0%
GATTAGATTTCTCACTTTAG+TGG + chr2_2:59608767-59608786 Msa0261310:intron 30.0%
!!! TCACTTTAGTGGCTTTTTTT+TGG + chr2_2:59608778-59608797 Msa0261310:intron 30.0%
TTGTAATAAGCTCAAAGCTT+TGG + chr2_2:59609088-59609107 Msa0261310:intron 30.0%
GAAAAAAAAAATTAGCCCAG+GGG - chr2_2:59609350-59609369 None:intergenic 30.0%
GTCAAACAAAAAAGGCTTAA+TGG - chr2_2:59609724-59609743 None:intergenic 30.0%
GAAAGTTTCACATATTAGAG+TGG - chr2_2:59610023-59610042 None:intergenic 30.0%
ACAAATAAATCTTGGCACTT+AGG - chr2_2:59610045-59610064 None:intergenic 30.0%
AACAAAACATTCACATTTGG+TGG + chr2_2:59610102-59610121 Msa0261310:intron 30.0%
AATTACTGTAAACCAGTTGA+TGG - chr2_2:59610162-59610181 None:intergenic 30.0%
CTTATATTCAAGACCAAAGA+AGG + chr2_2:59610363-59610382 Msa0261310:intron 30.0%
GAATAAGACAAGAAACTCAA+TGG + chr2_2:59610428-59610447 Msa0261310:intron 30.0%
! TTCGAAAGTTCTAATACAGA+TGG + chr2_2:59610798-59610817 Msa0261310:intron 30.0%
GTGATTCTTTACCTCATTAT+CGG - chr2_2:59610989-59611008 None:intergenic 30.0%
ATAATGAGGTAAAGAATCAC+TGG + chr2_2:59610989-59611008 Msa0261310:CDS 30.0%
CTTTATAAAACGCTTCTTCA+AGG - chr2_2:59611022-59611041 None:intergenic 30.0%
AAGAATATTAAGTCTAAGCG+TGG + chr2_2:59611039-59611058 Msa0261310:CDS 30.0%
!! TATTGGCTTCTTCCAATATA+GGG - chr2_2:59611101-59611120 None:intergenic 30.0%
!! TTATTGGCTTCTTCCAATAT+AGG - chr2_2:59611102-59611121 None:intergenic 30.0%
GAAGAAGCCAATAAATTTGA+AGG + chr2_2:59611108-59611127 Msa0261310:CDS 30.0%
!! TGATAGTGACCTTTCTTTTA+TGG + chr2_2:59611233-59611252 Msa0261310:CDS 30.0%
AGATAGTGAACTCGTAATAT+TGG - chr2_2:59611397-59611416 None:intergenic 30.0%
ATAATGCATCCATAAAAGGA+AGG - chr2_2:59611512-59611531 None:intergenic 30.0%
TTCTATGCCAATAAACTTGA+AGG + chr2_2:59611585-59611604 Msa0261310:CDS 30.0%
TGGATTCTCATATGATATTG+TGG - chr2_2:59611706-59611725 None:intergenic 30.0%
! TGACAATGACCTTCATTTTA+TGG + chr2_2:59611734-59611753 Msa0261310:CDS 30.0%
TGAATGCATCCATAAAATGA+AGG - chr2_2:59611746-59611765 None:intergenic 30.0%
! TTTTATGGATGCATTCATAG+AGG + chr2_2:59611749-59611768 Msa0261310:CDS 30.0%
TGTGAACTGTCTATCATATA+AGG - chr2_2:59611801-59611820 None:intergenic 30.0%
TTTCCATTGTAAGGTGATTA+TGG - chr2_2:59611830-59611849 None:intergenic 30.0%
AAATTGTTACAGTAATGTGG+TGG + chr2_2:59612069-59612088 Msa0261310:exon 30.0%
ATTAGAGTGTATTCTCTACA+TGG - chr2_2:59612113-59612132 None:intergenic 30.0%
CAATCCATTATTGTCACAAG+GGG - chr2_2:59606682-59606701 None:intergenic 35.0%
CTCAATCCATTATTGTCACA+AGG - chr2_2:59606684-59606703 None:intergenic 35.0%
! TGCAGGTATCGTATAAGAAA+AGG + chr2_2:59606794-59606813 Msa0261310:intron 35.0%
! GACATTGAATGATTGGTCAT+TGG - chr2_2:59606874-59606893 None:intergenic 35.0%
! AACTCGAGAGAATTGTTTTC+AGG + chr2_2:59607115-59607134 Msa0261310:intron 35.0%
! ACTCGAGAGAATTGTTTTCA+GGG + chr2_2:59607116-59607135 Msa0261310:intron 35.0%
!! AATTGTTTTCAGGGCTTGAA+AGG + chr2_2:59607125-59607144 Msa0261310:intron 35.0%
TGAGGCCAAATATCAAAAGA+GGG + chr2_2:59607185-59607204 Msa0261310:CDS 35.0%
AGGGAACTTTAATCAACAAG+AGG + chr2_2:59607204-59607223 Msa0261310:CDS 35.0%
! TGTTGGCTGATAACAATTTC+GGG - chr2_2:59607456-59607475 None:intergenic 35.0%
! TTTCTTCCATTTTGCTACCA+TGG + chr2_2:59607495-59607514 Msa0261310:intron 35.0%
TTTCCCTCATAGCTATTGAA+TGG + chr2_2:59607641-59607660 Msa0261310:intron 35.0%
TCACCATTCAATAGCTATGA+GGG - chr2_2:59607647-59607666 None:intergenic 35.0%
!!! CCGATTTCACTGATTTTGTT+GGG - chr2_2:59607739-59607758 None:intergenic 35.0%
CCCAACAAAATCAGTGAAAT+CGG + chr2_2:59607736-59607755 Msa0261310:intron 35.0%
!!! TCCGATTTCACTGATTTTGT+TGG - chr2_2:59607740-59607759 None:intergenic 35.0%
CACACGTTTAATGAGCTTAT+GGG - chr2_2:59607847-59607866 None:intergenic 35.0%
TCTATGGAAGATGAGTTGTT+TGG - chr2_2:59607891-59607910 None:intergenic 35.0%
GGTCGTTTAAGTGTAATCTA+TGG - chr2_2:59607907-59607926 None:intergenic 35.0%
CATTGTTAGCATCAACCAAT+AGG + chr2_2:59608330-59608349 Msa0261310:intron 35.0%
!! AGAAAGCATTCCTAACGATA+TGG - chr2_2:59608372-59608391 None:intergenic 35.0%
TTGATGTTGGATCTATGTAG+CGG - chr2_2:59608404-59608423 None:intergenic 35.0%
!! TATATCAATGGGGTTGATGT+TGG - chr2_2:59608417-59608436 None:intergenic 35.0%
AACATCAACCCCATTGATAT+AGG + chr2_2:59608416-59608435 Msa0261310:intron 35.0%
TCGACTCAACCTATATCAAT+GGG - chr2_2:59608428-59608447 None:intergenic 35.0%
!! CTTTGTTGATTCTTCCCATT+TGG + chr2_2:59608978-59608997 Msa0261310:intron 35.0%
AATAGGCGGCGTTTAAAAAT+TGG + chr2_2:59609196-59609215 Msa0261310:intron 35.0%
AATAGGCGGCGTTTAAAAAT+TGG - chr2_2:59609196-59609215 None:intergenic 35.0%
CGAGAGTTGTCAAACAAAAA+AGG - chr2_2:59609732-59609751 None:intergenic 35.0%
CTTAGGTGATCACATAAAGA+AGG - chr2_2:59609926-59609945 None:intergenic 35.0%
CTTCTTTATGTGATCACCTA+AGG + chr2_2:59609924-59609943 Msa0261310:intron 35.0%
GGTGAAATATGTCTAACCTT+AGG - chr2_2:59609943-59609962 None:intergenic 35.0%
AGTTTCACATATTAGAGTGG+TGG - chr2_2:59610020-59610039 None:intergenic 35.0%
!! ACCAAAGAAGGTATCTCTTT+AGG + chr2_2:59610375-59610394 Msa0261310:intron 35.0%
!! CCAAAGAAGGTATCTCTTTA+GGG + chr2_2:59610376-59610395 Msa0261310:intron 35.0%
AAGAAACTCAATGGATGAGA+TGG + chr2_2:59610437-59610456 Msa0261310:intron 35.0%
AGAAACTCAATGGATGAGAT+GGG + chr2_2:59610438-59610457 Msa0261310:intron 35.0%
! CGGTAAATTTGAAGCAATCA+CGG - chr2_2:59610959-59610978 None:intergenic 35.0%
CGTGATTGCTTCAAATTTAC+CGG + chr2_2:59610957-59610976 Msa0261310:CDS 35.0%
GTGATTGCTTCAAATTTACC+GGG + chr2_2:59610958-59610977 Msa0261310:CDS 35.0%
TGATTGCTTCAAATTTACCG+GGG + chr2_2:59610959-59610978 Msa0261310:CDS 35.0%
ATATTAAGTCTAAGCGTGGA+AGG + chr2_2:59611043-59611062 Msa0261310:CDS 35.0%
CGATTTGTCTTGCATAACAA+TGG + chr2_2:59611194-59611213 Msa0261310:CDS 35.0%
AGTTTCTTGGTTTCTTCCAT+TGG - chr2_2:59611342-59611361 None:intergenic 35.0%
GAAGAAACCAAGAAACTTGA+AGG + chr2_2:59611345-59611364 Msa0261310:CDS 35.0%
!! GACAATCGACTTGCAATATT+AGG - chr2_2:59611630-59611649 None:intergenic 35.0%
AGGTCATTGTCATCAAGAAT+TGG - chr2_2:59611726-59611745 None:intergenic 35.0%
AGGATTTGAGTGAGAATTTC+TGG + chr2_2:59611769-59611788 Msa0261310:CDS 35.0%
AATAGTGTAGCTTCTTCAGT+TGG - chr2_2:59611975-59611994 None:intergenic 35.0%
! CTGTGTACGATGTAGAATTT+TGG + chr2_2:59612030-59612049 Msa0261310:CDS 35.0%
AGAACCCCTTGTGACAATAA+TGG + chr2_2:59606675-59606694 Msa0261310:five_prime_UTR 40.0%
!! ATGGATTGAGAAAAGGCACT+TGG + chr2_2:59606694-59606713 Msa0261310:five_prime_UTR 40.0%
ATGTTACTAGGTATGGCTGT+TGG + chr2_2:59606748-59606767 Msa0261310:five_prime_UTR 40.0%
CGACAACTACCTAAATTTGC+AGG + chr2_2:59606777-59606796 Msa0261310:five_prime_UTR 40.0%
GAGAATTCTTTGCAGTATCC+TGG - chr2_2:59607005-59607024 None:intergenic 40.0%
TATGCGCTATCTCAGTATCT+TGG + chr2_2:59607078-59607097 Msa0261310:intron 40.0%
TAAGGTGGATGAACTATCTG+AGG + chr2_2:59607167-59607186 Msa0261310:exon 40.0%
CTGAGGCCAAATATCAAAAG+AGG + chr2_2:59607184-59607203 Msa0261310:CDS 40.0%
!! GCTGATAACAATTTCGGGTT+GGG - chr2_2:59607451-59607470 None:intergenic 40.0%
AGAGAGGCAATCTATGAGAA+TGG - chr2_2:59607525-59607544 None:intergenic 40.0%
GTCACCATTCAATAGCTATG+AGG - chr2_2:59607648-59607667 None:intergenic 40.0%
CGTTTAATGAGCTTATGGGT+CGG - chr2_2:59607843-59607862 None:intergenic 40.0%
CCACACGTTTAATGAGCTTA+TGG - chr2_2:59607848-59607867 None:intergenic 40.0%
CCATAAGCTCATTAAACGTG+TGG + chr2_2:59607845-59607864 Msa0261310:intron 40.0%
AAGCATTCCTAACGATATGG+AGG - chr2_2:59608369-59608388 None:intergenic 40.0%
CGACTCAACCTATATCAATG+GGG - chr2_2:59608427-59608446 None:intergenic 40.0%
! GTCGACTCAACCTATATCAA+TGG - chr2_2:59608429-59608448 None:intergenic 40.0%
ACAAAGAGAGAAACCAAGGA+GGG - chr2_2:59608652-59608671 None:intergenic 40.0%
AACAAAGAGAGAAACCAAGG+AGG - chr2_2:59608653-59608672 None:intergenic 40.0%
GGTATAAGTGCTTCTCTAGT+TGG + chr2_2:59609025-59609044 Msa0261310:intron 40.0%
GTCATTGCAATCGTTAATCC+TGG + chr2_2:59609218-59609237 Msa0261310:intron 40.0%
!! GCAGTGATTAAGTTGGTCAA+AGG - chr2_2:59609597-59609616 None:intergenic 40.0%
!! ATTTTGCTAATCTGGTGACG+TGG - chr2_2:59609305-59609324 None:intergenic 40.0%
ACGTCACCAGATTAGCAAAA+TGG + chr2_2:59609304-59609323 Msa0261310:intron 40.0%
ACCAGATTAGCAAAATGGCA+TGG + chr2_2:59609309-59609328 Msa0261310:intron 40.0%
CCAGATTAGCAAAATGGCAT+GGG + chr2_2:59609310-59609329 Msa0261310:intron 40.0%
GAATTGACCAAAATACCCCT+GGG + chr2_2:59609332-59609351 Msa0261310:intron 40.0%
!!! AAATTAGCCCAGGGGTATTT+TGG - chr2_2:59609342-59609361 None:intergenic 40.0%
!! GCAGTGATTAAGTTGGTCAA+AGG + chr2_2:59609597-59609616 Msa0261310:intron 40.0%
TTGTTGCATCGTGAGTTTGA+AGG + chr2_2:59609762-59609781 Msa0261310:intron 40.0%
TGTTGCATCGTGAGTTTGAA+GGG + chr2_2:59609763-59609782 Msa0261310:intron 40.0%
ACTAACTTCTCACCATCAAC+TGG + chr2_2:59610147-59610166 Msa0261310:intron 40.0%
CCCTAAAGAGATACCTTCTT+TGG - chr2_2:59610379-59610398 None:intergenic 40.0%
!! GTATCTCTTTAGGGTTCGTT+TGG + chr2_2:59610385-59610404 Msa0261310:intron 40.0%
! TTTTTGGACAGCGCCATATA+TGG + chr2_2:59611284-59611303 Msa0261310:CDS 40.0%
TCTTGGTTTCTTCCATTGGA+GGG - chr2_2:59611338-59611357 None:intergenic 40.0%
TTCTTGGTTTCTTCCATTGG+AGG - chr2_2:59611339-59611358 None:intergenic 40.0%
GAAACCAAGAAACTTGAAGG+AGG + chr2_2:59611348-59611367 Msa0261310:CDS 40.0%
! AACTCCTCCTTCAAGTTTCT+TGG - chr2_2:59611355-59611374 None:intergenic 40.0%
! TGGCAATGACCTTCCTTTTA+TGG + chr2_2:59611500-59611519 Msa0261310:CDS 40.0%
CAAGAGAATGCACTTGAAGA+TGG - chr2_2:59611660-59611679 None:intergenic 40.0%
TGCATTCTCTTGCATAACAG+TGG + chr2_2:59611668-59611687 Msa0261310:CDS 40.0%
CCATTGTAAGGTGATTATGG+AGG - chr2_2:59611827-59611846 None:intergenic 40.0%
CCTCCATAATCACCTTACAA+TGG + chr2_2:59611824-59611843 Msa0261310:CDS 40.0%
AGACTGCGAATGAGAATGAT+TGG + chr2_2:59611928-59611947 Msa0261310:CDS 40.0%
!!! ATGAGGTGTCGGATTTTGAT+TGG + chr2_2:59612178-59612197 Msa0261310:three_prime_UTR 40.0%
GTTCTCACCATGGTCTCTAA+AGG - chr2_2:59606660-59606679 None:intergenic 45.0%
!! AAAAGGCACTTGGACTCATG+AGG + chr2_2:59606704-59606723 Msa0261310:five_prime_UTR 45.0%
CTAGGTATGGCTGTTGGAAT+TGG + chr2_2:59606754-59606773 Msa0261310:five_prime_UTR 45.0%
CTTTGTTCCAACAGAACTCC+AGG + chr2_2:59606984-59607003 Msa0261310:five_prime_UTR 45.0%
!! TTTTCAGGGCTTGAAAGGTG+TGG + chr2_2:59607130-59607149 Msa0261310:intron 45.0%
! TTTCAGGGCTTGAAAGGTGT+GGG + chr2_2:59607131-59607150 Msa0261310:intron 45.0%
! GGCTGATAACAATTTCGGGT+TGG - chr2_2:59607452-59607471 None:intergenic 45.0%
TCTATGAGAATGGCAAGCCA+TGG - chr2_2:59607515-59607534 None:intergenic 45.0%
ATCAGAGCTTGCAGATTGAG+CGG + chr2_2:59607706-59607725 Msa0261310:intron 45.0%
! GGTCATGTGACTTGTCCTAT+TGG - chr2_2:59608348-59608367 None:intergenic 45.0%
CACATGACCTCCATATCGTT+AGG + chr2_2:59608359-59608378 Msa0261310:intron 45.0%
! TATAGGTTGAGTCGACGACT+TGG + chr2_2:59608433-59608452 Msa0261310:intron 45.0%
!! GAGAGAAGCATCAGCCAAAT+GGG - chr2_2:59608995-59609014 None:intergenic 45.0%
!! AGAGAGAAGCATCAGCCAAA+TGG - chr2_2:59608996-59609015 None:intergenic 45.0%
TTGGCTGATGCTTCTCTCTA+TGG + chr2_2:59608997-59609016 Msa0261310:intron 45.0%
ATGCTTCTCTCTATGGCTGA+TGG + chr2_2:59609004-59609023 Msa0261310:intron 45.0%
TGTGTTTCACCCCTGCAAAT+AGG + chr2_2:59609179-59609198 Msa0261310:intron 45.0%
TTAAACGCCGCCTATTTGCA+GGG - chr2_2:59609688-59609707 None:intergenic 45.0%
TTTAAACGCCGCCTATTTGC+AGG - chr2_2:59609687-59609706 None:intergenic 45.0%
TGACGTGGCAGTGATTAAGT+TGG - chr2_2:59609590-59609609 None:intergenic 45.0%
!!! CCCATGCCATTTTGCTAATC+TGG - chr2_2:59609313-59609332 None:intergenic 45.0%
GGAATTGACCAAAATACCCC+TGG + chr2_2:59609331-59609350 Msa0261310:intron 45.0%
TGACGTGGCAGTGATTAAGT+TGG + chr2_2:59609590-59609609 Msa0261310:intron 45.0%
TTTAAACGCCGCCTATTTGC+AGG + chr2_2:59609687-59609706 Msa0261310:intron 45.0%
TTAAACGCCGCCTATTTGCA+GGG + chr2_2:59609688-59609707 Msa0261310:intron 45.0%
TGTGTTTCACCCCTGCAAAT+AGG - chr2_2:59609179-59609198 None:intergenic 45.0%
!! TCTCTTTAGGGTTCGTTTGG+TGG + chr2_2:59610388-59610407 Msa0261310:intron 45.0%
CAAGACAAATCGCTTGAAGC+TGG - chr2_2:59611186-59611205 None:intergenic 45.0%
CCATTGGAGGGTGATTATGA+GGG - chr2_2:59611326-59611345 None:intergenic 45.0%
TCCATTGGAGGGTGATTATG+AGG - chr2_2:59611327-59611346 None:intergenic 45.0%
TCTTCGCAACCATCTTCAAG+CGG + chr2_2:59611414-59611433 Msa0261310:CDS 45.0%
CAAGAGAATCCGCTTGAAGA+TGG - chr2_2:59611426-59611445 None:intergenic 45.0%
GTGTAGCTTCTTCAGTTGGA+GGG - chr2_2:59611971-59611990 None:intergenic 45.0%
AGTGTAGCTTCTTCAGTTGG+AGG - chr2_2:59611972-59611991 None:intergenic 45.0%
TCATGTTCACATGACTCTGC+AGG - chr2_2:59611999-59612018 None:intergenic 45.0%
!! CAAAAATTTAAATTAATTTA+AGG - chr2_2:59610200-59610219 None:intergenic 5.0%
!!! AAAAATATCAAAAATTATTT+TGG - chr2_2:59610532-59610551 None:intergenic 5.0%
!!! AAATTATTTCATTAAATTTT+AGG - chr2_2:59610555-59610574 None:intergenic 5.0%
! CTACCAGCCTTTAGAGACCA+TGG + chr2_2:59606650-59606669 Msa0261310:five_prime_UTR 50.0%
! TCACCATGGTCTCTAAAGGC+TGG - chr2_2:59606656-59606675 None:intergenic 50.0%
GCAGTATCCTGGAGTTCTGT+TGG - chr2_2:59606994-59607013 None:intergenic 50.0%
GTGGGAAGAGCTGTAGACTA+AGG + chr2_2:59607149-59607168 Msa0261310:five_prime_UTR 50.0%
GGAAGAGCTGTAGACTAAGG+TGG + chr2_2:59607152-59607171 Msa0261310:five_prime_UTR 50.0%
CTCTATCATGGCCTAACCCA+TGG + chr2_2:59607284-59607303 Msa0261310:intron 50.0%
GGCAAGCCATGGTAGCAAAA+TGG - chr2_2:59607504-59607523 None:intergenic 50.0%
GGGGCTGTCAAGTGTACAAA+CGG - chr2_2:59607595-59607614 None:intergenic 50.0%
AGAGAGAAACCAAGGAGGGA+GGG - chr2_2:59608648-59608667 None:intergenic 50.0%
AAGAGAGAAACCAAGGAGGG+AGG - chr2_2:59608649-59608668 None:intergenic 50.0%
!! GCTCAAAGCTTTGGCTTGAG+TGG + chr2_2:59609097-59609116 Msa0261310:intron 50.0%
GTTTCACCCCTGCAAATAGG+CGG + chr2_2:59609182-59609201 Msa0261310:intron 50.0%
TAAACGCCGCCTATTTGCAG+GGG - chr2_2:59609689-59609708 None:intergenic 50.0%
CTTTGCAAGGGCAATTTGCC+AGG - chr2_2:59609641-59609660 None:intergenic 50.0%
CTTTGCAAGGGCAATTTGCC+AGG + chr2_2:59609641-59609660 Msa0261310:intron 50.0%
! TGCCAGGATTAGCGATTGCA+AGG + chr2_2:59609657-59609676 Msa0261310:intron 50.0%
GTCCTTGCAATCGCTAATCC+TGG - chr2_2:59609662-59609681 None:intergenic 50.0%
TAAACGCCGCCTATTTGCAG+GGG + chr2_2:59609689-59609708 Msa0261310:intron 50.0%
GTTTCACCCCTGCAAATAGG+CGG - chr2_2:59609182-59609201 None:intergenic 50.0%
!! ACCTCATTATCGGTTCTCCC+CGG - chr2_2:59610979-59610998 None:intergenic 50.0%
CCCTCATAATCACCCTCCAA+TGG + chr2_2:59611323-59611342 Msa0261310:CDS 50.0%
GTCACAAGGGGTTCTCACCA+TGG - chr2_2:59606670-59606689 None:intergenic 55.0%
AGAAACCAAGGAGGGAGGGA+GGG - chr2_2:59608644-59608663 None:intergenic 55.0%
ACCGGGGAGAACCGATAATG+AGG + chr2_2:59610975-59610994 Msa0261310:CDS 55.0%
GAGAAACCAAGGAGGGAGGG+AGG - chr2_2:59608645-59608664 None:intergenic 60.0%
TCTCTCCCTCCCTCCCTCCT+TGG + chr2_2:59608636-59608655 Msa0261310:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 59606612 59612217 59606612 ID=Msa0261310;Name=Msa0261310
chr2_2 mRNA 59606612 59612217 59606612 ID=Msa0261310-mRNA-1;Parent=Msa0261310;Name=Msa0261310-mRNA-1;_AED=0.19;_eAED=0.19;_QI=299|1|1|1|0.33|0.75|4|147|403
chr2_2 exon 59606612 59606798 59606612 ID=Msa0261310-mRNA-1:exon:18366;Parent=Msa0261310-mRNA-1
chr2_2 exon 59606980 59607053 59606980 ID=Msa0261310-mRNA-1:exon:18367;Parent=Msa0261310-mRNA-1
chr2_2 exon 59607137 59607266 59607137 ID=Msa0261310-mRNA-1:exon:18368;Parent=Msa0261310-mRNA-1
chr2_2 exon 59610951 59612217 59610951 ID=Msa0261310-mRNA-1:exon:18369;Parent=Msa0261310-mRNA-1
chr2_2 five_prime_UTR 59606612 59606798 59606612 ID=Msa0261310-mRNA-1:five_prime_utr;Parent=Msa0261310-mRNA-1
chr2_2 five_prime_UTR 59606980 59607053 59606980 ID=Msa0261310-mRNA-1:five_prime_utr;Parent=Msa0261310-mRNA-1
chr2_2 five_prime_UTR 59607137 59607174 59607137 ID=Msa0261310-mRNA-1:five_prime_utr;Parent=Msa0261310-mRNA-1
chr2_2 CDS 59607175 59607266 59607175 ID=Msa0261310-mRNA-1:cds;Parent=Msa0261310-mRNA-1
chr2_2 CDS 59610951 59612070 59610951 ID=Msa0261310-mRNA-1:cds;Parent=Msa0261310-mRNA-1
chr2_2 three_prime_UTR 59612071 59612217 59612071 ID=Msa0261310-mRNA-1:three_prime_utr;Parent=Msa0261310-mRNA-1
Gene Sequence

>Msa0261310

ATGAACTATCTGAGGCCAAATATCAAAAGAGGGAACTTTAATCAACAAGAGGAAGAGATTATCATCAAACTTCATGAAAAACTGGGTAATAGATGGACCGTGATTGCTTCAAATTTACCGGGGAGAACCGATAATGAGGTAAAGAATCACTGGCACACTACCTTGAAGAAGCGTTTTATAAAGAATATTAAGTCTAAGCGTGGAAGGAGAAAAGCCAAAGATTCAAATTCAAATAATCACCCTATATTGGAAGAAGCCAATAAATTTGAAGGAGTTTTAGAGAACAACAATGATCCTAATATTGCAAATCAAATATCTTCACAACCAGCTTCAAGCGATTTGTCTTGCATAACAATGGAAACTGCAATTTTTGATGATAGTGACCTTTCTTTTATGGAAACATACATGGACAATTTTTGTGAGAATTTTTGGACAGCGCCATATATGGTAAACAATTCATATGTCCCTCATAATCACCCTCCAATGGAAGAAACCAAGAAACTTGAAGGAGGAGTTTTTGAGAACAACATCGATGCCAATATTACGAGTTCACTATCTTCGCAACCATCTTCAAGCGGATTCTCTTGCATAACAACAGAAAATTTAGCTTCCACTATATCACATGAAAATTCAGTTTTTGATGGCAATGACCTTCCTTTTATGGATGCATTATTCATGGAGACTGTGAGTGAGAATTTTTTGACTGAGCCATATATGATAGACACTTTCTATGCCAATAAACTTGAAGGAGTTTTAGAGAACAATGATCCTAATATTGCAAGTCGATTGTCTTCACAACCATCTTCAAGTGCATTCTCTTGCATAACAGTGGATACTGCATCTACCACAATATCATATGAGAATCCAATTCTTGATGACAATGACCTTCATTTTATGGATGCATTCATAGAGGATTTGAGTGAGAATTTCTGGTCAGAGCCTTATATGATAGACAGTTCACATGTCCTCCATAATCACCTTACAATGGAAAATGTTACTTCCACAACATCACATGAAAATTTTGTTCTTGATGAAAATGACATTCCTTTAATGGATGCATTATTCATGGAGACTGCGAATGAGAATGATTGGATAAACAGTTTTTATGTCCCTCCAACTGAAGAAGCTACACTATTTCCTGCAGAGTCATGTGAACATGAATACTTTAGTTCTGTGTACGATGTAGAATTTTGGAGCCATATTGCAGAATAA
Protein sequence

>Msa0261310

MNYLRPNIKRGNFNQQEEEIIIKLHEKLGNRWTVIASNLPGRTDNEVKNHWHTTLKKRFIKNIKSKRGRRKAKDSNSNNHPILEEANKFEGVLENNNDPNIANQISSQPASSDLSCITMETAIFDDSDLSFMETYMDNFCENFWTAPYMVNNSYVPHNHPPMEETKKLEGGVFENNIDANITSSLSSQPSSSGFSCITTENLASTISHENSVFDGNDLPFMDALFMETVSENFLTEPYMIDTFYANKLEGVLENNDPNIASRLSSQPSSSAFSCITVDTASTTISYENPILDDNDLHFMDAFIEDLSENFWSEPYMIDSSHVLHNHLTMENVTSTTSHENFVLDENDIPLMDALFMETANENDWINSFYVPPTEEATLFPAESCEHEYFSSVYDVEFWSHIAE*