AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0261760

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261760 MtrunA17_Chr2g0296781 73.109 714 179 5 493 1194 3 715 0.0 1083
Msa0261760 MtrunA17_Chr6g0477261 71.252 647 163 5 602 1226 1 646 0.0 950
Msa0261760 MtrunA17_Chr1g0196541 60.441 771 257 8 493 1257 3 731 0.0 924
Msa0261760 MtrunA17_Chr5g0441581 44.978 687 354 9 473 1148 15 688 0.0 587
Msa0261760 MtrunA17_Chr2g0291581 37.986 566 332 9 487 1047 71 622 1.75e-120 389
Msa0261760 MtrunA17_Chr2g0329031 35.654 589 346 10 493 1072 20 584 1.94e-118 385
Msa0261760 MtrunA17_Chr1g0207551 37.326 576 335 7 484 1048 31 591 3.82e-118 387
Msa0261760 MtrunA17_Chr5g0448761 36.915 577 342 12 484 1046 57 625 4.25e-116 381
Msa0261760 MtrunA17_Chr3g0080351 34.691 614 350 10 486 1081 75 655 2.08e-114 378
Msa0261760 MtrunA17_Chr1g0202341 36.348 575 339 12 486 1047 50 610 5.02e-112 367
Msa0261760 MtrunA17_Chr2g0291591 35.060 502 319 4 463 960 39 537 2.07e-98 325
Msa0261760 MtrunA17_Chr5g0440451 32.800 625 364 17 486 1081 42 639 5.80e-93 321
Msa0261760 MtrunA17_Chr7g0217951 68.750 208 65 0 136 343 228 435 5.45e-91 301
Msa0261760 MtrunA17_Chr7g0217951 59.494 158 45 2 1 139 1 158 1.30e-49 183
Msa0261760 MtrunA17_Chr5g0410781 66.667 210 70 0 134 343 39 248 2.56e-90 291
Msa0261760 MtrunA17_Chr8g0363841 30.598 585 368 8 483 1046 10 577 1.68e-83 287
Msa0261760 MtrunA17_Chr5g0448511 36.500 400 244 6 644 1041 1 392 2.15e-83 283
Msa0261760 MtrunA17_Chr3g0118611 37.232 419 247 7 651 1067 113 517 9.65e-83 288
Msa0261760 MtrunA17_Chr5g0412301 43.425 327 172 3 135 450 243 567 1.97e-79 273
Msa0261760 MtrunA17_Chr5g0412301 60.000 95 38 0 39 133 69 163 4.51e-33 136
Msa0261760 MtrunA17_Chr1g0210871 45.631 309 156 2 137 435 253 559 2.87e-79 272
Msa0261760 MtrunA17_Chr1g0210871 60.000 105 42 0 31 135 61 165 2.75e-36 146
Msa0261760 MtrunA17_Chr2g0287061 32.831 597 321 17 468 1044 163 699 6.04e-78 275
Msa0261760 MtrunA17_Chr2g0287651 29.350 569 370 10 493 1046 81 632 7.71e-77 273
Msa0261760 MtrunA17_Chr6g0476441 50.519 289 100 5 986 1232 1 288 7.30e-76 253
Msa0261760 MtrunA17_Chr1g0198761 29.741 696 425 23 490 1152 50 714 8.88e-75 265
Msa0261760 MtrunA17_Chr2g0324011 29.116 577 380 11 484 1046 7 568 1.65e-74 259
Msa0261760 MtrunA17_Chr2g0323961 51.984 252 46 2 60 311 1 177 1.90e-72 239
Msa0261760 MtrunA17_Chr1g0203051 29.068 547 361 12 493 1027 85 616 2.95e-70 248
Msa0261760 MtrunA17_Chr2g0276841 27.365 592 360 15 487 1043 70 626 1.17e-67 242
Msa0261760 MtrunA17_Chr6g0458391 27.598 587 386 14 471 1046 207 765 3.26e-64 234
Msa0261760 MtrunA17_Chr3g0082121 29.917 605 372 18 463 1046 17 590 1.28e-63 230
Msa0261760 MtrunA17_Chr1g0203721 28.328 586 365 14 489 1046 65 623 3.09e-63 233
Msa0261760 MtrunA17_Chr2g0294841 25.315 715 462 17 487 1159 45 729 7.41e-57 211
Msa0261760 MtrunA17_Chr5g0431001 31.221 426 269 10 487 892 61 482 2.73e-55 201
Msa0261760 MtrunA17_Chr2g0290391 26.370 584 381 19 487 1044 51 611 1.48e-49 188
Msa0261760 MtrunA17_Chr1g0164591 33.739 329 176 9 565 874 3 308 1.27e-46 170
Msa0261760 MtrunA17_Chr7g0258861 31.818 286 182 5 484 759 7 289 2.65e-40 151
Msa0261760 MtrunA17_Chr4g0059061 30.241 291 163 10 157 441 46 302 8.48e-34 133
Msa0261760 MtrunA17_Chr3g0117631 29.316 307 169 10 134 431 35 302 7.72e-33 130
Msa0261760 MtrunA17_Chr6g0476431 60.465 86 34 0 493 578 3 88 1.66e-30 115
Msa0261760 MtrunA17_Chr8g0380321 27.113 284 170 7 160 435 25 279 7.10e-26 109
Msa0261760 MtrunA17_Chr7g0238751 59.091 88 36 0 131 218 36 123 6.30e-24 98.6
Msa0261760 MtrunA17_Chr6g0451441 32.500 200 125 5 455 648 52 247 1.45e-20 96.7
Msa0261760 MtrunA17_Chr2g0308841 27.854 219 141 5 831 1043 17 224 2.44e-16 80.9
Msa0261760 MtrunA17_Chr1g0172041 31.818 110 74 1 960 1069 3 111 1.14e-14 71.6
Msa0261760 MtrunA17_Chr3g0077731 45.370 108 46 4 1099 1194 1 107 3.37e-12 64.7
Msa0261760 MtrunA17_Chr1g0149131 29.915 117 67 3 761 869 1 110 8.78e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261760 AT4G15090.1 30.643 855 517 18 444 1261 11 826 4.83e-124 404
Msa0261760 AT4G15090.5 30.643 855 517 18 444 1261 11 826 4.83e-124 404
Msa0261760 AT4G15090.3 30.643 855 517 18 444 1261 11 826 4.83e-124 404
Msa0261760 AT4G15090.2 30.643 855 517 18 444 1261 11 826 4.83e-124 404
Msa0261760 AT4G15090.4 30.643 855 517 18 444 1261 11 826 4.83e-124 404
Msa0261760 AT1G76320.3 36.760 574 325 12 493 1053 3 551 3.87e-114 372
Msa0261760 AT1G76320.1 36.760 574 325 12 493 1053 3 551 6.76e-114 374
Msa0261760 AT1G76320.4 36.760 574 325 12 493 1053 3 551 6.76e-114 374
Msa0261760 AT1G76320.2 36.760 574 325 12 493 1053 3 551 8.90e-114 373
Msa0261760 AT4G38180.1 34.576 590 362 8 470 1046 56 634 1.39e-111 369
Msa0261760 AT1G52520.1 33.929 672 392 17 454 1088 37 693 9.73e-109 358
Msa0261760 AT3G22170.2 33.505 582 340 6 486 1049 69 621 1.07e-107 360
Msa0261760 AT3G22170.1 33.505 582 340 6 486 1049 69 621 1.07e-107 360
Msa0261760 AT1G80010.1 32.409 577 365 13 487 1047 95 662 3.17e-94 319
Msa0261760 AT2G32250.2 33.810 559 316 9 490 1043 41 550 2.17e-93 319
Msa0261760 AT2G32250.4 33.810 559 316 9 490 1043 41 550 2.17e-93 319
Msa0261760 AT2G32250.6 33.810 559 316 9 490 1043 41 550 2.58e-93 319
Msa0261760 AT2G32250.1 33.810 559 316 9 490 1043 41 550 2.58e-93 319
Msa0261760 AT2G32250.3 33.810 559 316 9 490 1043 41 550 2.58e-93 319
Msa0261760 AT2G32250.7 33.813 556 314 9 493 1043 3 509 2.98e-93 318
Msa0261760 AT4G19990.5 34.983 606 325 16 490 1072 24 583 3.07e-93 317
Msa0261760 AT2G32250.8 33.813 556 314 9 493 1043 3 509 3.21e-93 318
Msa0261760 AT4G19990.3 34.983 606 325 16 490 1072 24 583 4.02e-93 317
Msa0261760 AT4G19990.4 34.983 606 325 16 490 1072 24 583 4.02e-93 317
Msa0261760 AT4G19990.7 34.983 606 325 16 490 1072 38 597 5.96e-93 317
Msa0261760 AT4G19990.6 34.983 606 325 16 490 1072 24 583 6.57e-93 317
Msa0261760 AT4G19990.2 34.983 606 325 16 490 1072 24 583 6.57e-93 317
Msa0261760 AT4G19990.1 35.361 526 288 11 553 1072 47 526 6.55e-87 298
Msa0261760 AT2G27110.2 33.049 587 348 14 468 1046 30 579 6.53e-86 299
Msa0261760 AT2G27110.1 33.049 587 348 14 468 1046 30 579 6.53e-86 299
Msa0261760 AT2G32250.5 37.760 384 227 4 663 1043 176 550 1.48e-83 290
Msa0261760 AT2G27110.3 35.535 439 262 9 611 1046 14 434 5.42e-82 284
Msa0261760 AT5G18960.2 31.041 567 333 15 486 1044 210 726 7.51e-76 269
Msa0261760 AT5G18960.1 31.041 567 333 15 486 1044 210 726 7.51e-76 269
Msa0261760 AT3G06250.2 30.427 562 340 12 486 1044 189 702 1.36e-75 267
Msa0261760 AT3G06250.1 30.427 562 340 12 486 1044 189 702 1.36e-75 267
Msa0261760 AT3G06250.3 30.427 562 340 12 486 1044 189 702 1.36e-75 267
Msa0261760 AT4G38170.1 34.684 395 246 6 658 1050 19 403 6.65e-75 259
Msa0261760 AT1G10240.2 28.525 610 357 20 473 1043 35 604 2.94e-67 241
Msa0261760 AT1G10240.1 28.525 610 357 20 473 1043 35 604 2.94e-67 241
Msa0261760 AT1G32230.3 41.639 305 142 4 156 437 273 564 1.16e-66 236
Msa0261760 AT1G32230.3 40.206 97 58 0 40 136 73 169 2.56e-21 100
Msa0261760 AT1G32230.6 41.639 305 142 4 156 437 273 564 1.47e-66 237
Msa0261760 AT1G32230.6 40.206 97 58 0 40 136 73 169 2.75e-21 100
Msa0261760 AT1G32230.4 41.639 305 142 4 156 437 273 564 1.47e-66 237
Msa0261760 AT1G32230.4 40.206 97 58 0 40 136 73 169 2.75e-21 100
Msa0261760 AT1G32230.2 41.639 305 142 4 156 437 273 564 1.47e-66 237
Msa0261760 AT1G32230.2 40.206 97 58 0 40 136 73 169 2.75e-21 100
Msa0261760 AT1G32230.5 41.639 305 142 4 156 437 273 564 1.47e-66 237
Msa0261760 AT1G32230.5 40.206 97 58 0 40 136 73 169 2.75e-21 100
Msa0261760 AT1G32230.1 40.984 305 145 4 156 437 273 565 2.76e-66 236
Msa0261760 AT1G32230.1 40.206 97 58 0 40 136 73 169 2.94e-21 100
Msa0261760 AT2G35510.1 42.808 292 148 4 155 431 268 555 4.19e-59 214
Msa0261760 AT2G35510.1 42.105 95 55 0 39 133 71 165 3.07e-21 100
Msa0261760 AT2G35510.3 42.808 292 148 4 155 431 268 555 4.19e-59 214
Msa0261760 AT2G35510.3 42.105 95 55 0 39 133 71 165 3.07e-21 100
Msa0261760 AT2G35510.2 51.053 190 89 2 155 344 268 453 3.77e-52 191
Msa0261760 AT2G35510.2 42.105 95 55 0 39 133 71 165 1.82e-21 99.8
Msa0261760 AT5G28530.3 24.791 597 374 14 487 1044 55 615 6.58e-51 192
Msa0261760 AT5G28530.2 24.791 597 374 14 487 1044 55 615 6.58e-51 192
Msa0261760 AT5G28530.1 25.763 590 381 14 487 1044 55 619 1.05e-49 189
Msa0261760 AT1G23550.1 30.693 303 162 11 154 442 51 319 4.29e-38 146
Msa0261760 AT5G62520.1 29.249 253 142 6 183 431 77 296 3.68e-33 131
Msa0261760 AT1G70440.2 29.682 283 155 6 159 431 48 296 4.09e-33 131
Msa0261760 AT1G70440.1 29.682 283 155 6 159 431 48 296 4.09e-33 131
Msa0261760 AT5G28530.5 24.924 329 206 7 729 1044 252 552 1.23e-26 117
Msa0261760 AT5G28530.4 27.019 322 212 7 729 1044 252 556 1.67e-25 114
Msa0261760 AT5G62520.2 34.783 161 97 4 183 339 77 233 2.00e-25 107
Msa0261760 AT3G47720.1 26.766 269 139 6 178 431 76 301 7.19e-21 95.5

Find 219 sgRNAs with CRISPR-Local

Find 364 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCATTGGTGAATGCTTTC+TGG 0.174694 2_2:-60400171 None:intergenic
CAAGAGTTATGCACAATCTA+TGG 0.188703 2_2:+60398866 Msa0261760:CDS
TCACTCATAAGTATTGAATT+TGG 0.202186 2_2:-60401175 None:intergenic
GAGAATACATTGCAGATTTC+AGG 0.203708 2_2:-60397663 None:intergenic
CACCATCGATGACGAGCTTT+TGG 0.216625 2_2:-60399713 None:intergenic
AAGGAAAACAAGGCTGATTT+TGG 0.221363 2_2:+60400094 Msa0261760:CDS
TATTGTGACAATGATGAAAA+TGG 0.227582 2_2:+60396514 Msa0261760:CDS
ATAGCTTGTATAAGTCATTT+TGG 0.245260 2_2:+60400133 Msa0261760:CDS
AATGCATGTATTTCTTTAGA+TGG 0.249459 2_2:+60399041 Msa0261760:CDS
GAGAGTAAGAAAACTGGATA+TGG 0.262330 2_2:+60397051 Msa0261760:CDS
CTAAAATAGCGTGCTTTGTC+AGG 0.272247 2_2:-60399113 None:intergenic
GTAAAGGATATGTTTCTTAC+AGG 0.273075 2_2:+60396071 Msa0261760:CDS
TATGCACAATCTATGGGTTT+TGG 0.276171 2_2:+60398873 Msa0261760:CDS
TTTGAGTAAGAGTGATTTCA+TGG 0.279123 2_2:+60399832 Msa0261760:CDS
CCTTTACTTCGAGTCGGTAT+AGG 0.287148 2_2:-60400739 None:intergenic
GCTTACACTGAATTTATATA+TGG 0.297059 2_2:+60396029 Msa0261760:CDS
CTTTGTGTTCTAAAGTTAAC+AGG 0.303944 2_2:+60400415 Msa0261760:CDS
AGTGGTTGCGAATATAATAA+TGG 0.311416 2_2:+60396616 Msa0261760:CDS
CTGTCAAAGATGGCGGAATA+TGG 0.312160 2_2:+60396263 Msa0261760:CDS
CATATGTGAGAGACACGTTT+TGG 0.314193 2_2:+60399945 Msa0261760:CDS
CTTATAAAACATCAAACGTT+TGG 0.316741 2_2:-60395757 None:intergenic
TTGAAGCTGACAACACATTC+TGG 0.327118 2_2:-60396706 None:intergenic
AGGGCTGCATATGAATATTT+TGG 0.330794 2_2:+60399446 Msa0261760:CDS
TGATATCACAAAAGGAGTTC+AGG 0.333042 2_2:+60396193 Msa0261760:CDS
CTCAAAGTCTTTCTCATTGA+AGG 0.335766 2_2:-60400338 None:intergenic
TGATCGGTAATTATGGCATT+TGG 0.337887 2_2:-60399653 None:intergenic
TGAATTTATATATGGAAAAC+TGG 0.338096 2_2:+60396037 Msa0261760:CDS
ATTTGTTTAAAATGAGGAAT+TGG 0.340063 2_2:+60400620 Msa0261760:CDS
TTTGTGGCATATAATGAAAA+AGG 0.344495 2_2:+60399736 Msa0261760:CDS
AGTCCTATGTCGTGTCATAA+TGG 0.344705 2_2:+60396549 Msa0261760:CDS
TCTCCAACTAAAGGCATATA+TGG 0.345968 2_2:+60396305 Msa0261760:CDS
GCCAGGGGATGCTTCTTTAG+AGG 0.348401 2_2:-60400668 None:intergenic
TCATACTTGCTTTGAGAGAT+TGG 0.350261 2_2:+60400237 Msa0261760:CDS
GTCCTATGTCGTGTCATAAT+GGG 0.351255 2_2:+60396550 Msa0261760:CDS
GTGGTTGCGAATATAATAAT+GGG 0.355327 2_2:+60396617 Msa0261760:CDS
GAAGCAAGAAGCGTGATAAA+TGG 0.359168 2_2:-60397436 None:intergenic
CTTTACTTCGAGTCGGTATA+GGG 0.362130 2_2:-60400738 None:intergenic
CTTATAATTCAAATAACTCT+TGG 0.367756 2_2:-60395721 None:intergenic
AAATGTGGAGGTAGAATTAG+AGG 0.372516 2_2:+60395851 Msa0261760:CDS
TTATAAAACATCAAACGTTT+GGG 0.375726 2_2:-60395756 None:intergenic
TACCTGTAACAATTCAAAAT+AGG 0.379552 2_2:-60401327 None:intergenic
CGATGAATGGTTTGACTATC+CGG 0.379631 2_2:+60395782 Msa0261760:CDS
TTCATGAATTGAGAATAAAA+TGG 0.380300 2_2:-60401293 None:intergenic
TGCAATGTATTCTCATTTCA+AGG 0.382217 2_2:+60397672 Msa0261760:CDS
ATGATTTCATGCAGAAGTTA+AGG 0.385128 2_2:+60397620 Msa0261760:CDS
CTTACAGGAATGACTACTTT+CGG 0.387320 2_2:+60396086 Msa0261760:CDS
TGTCAGCTTCAAGGCCCCTT+TGG 0.392853 2_2:+60396717 Msa0261760:CDS
ATACCTTCAACAATTCATAA+TGG 0.393716 2_2:-60397504 None:intergenic
GCATGCACTCTAACCATGTT+TGG 0.393751 2_2:-60399619 None:intergenic
TACCTTCAACAATTCATAAT+GGG 0.409813 2_2:-60397503 None:intergenic
AAGTGAGGAGACTACGACTT+GGG 0.414907 2_2:+60399294 Msa0261760:CDS
AAGGGCGTCCTCCTTCAAAA+AGG 0.415773 2_2:+60400758 Msa0261760:CDS
TATTCTCAATTCATGAATCA+TGG 0.418189 2_2:+60401299 Msa0261760:CDS
TCATGGCCAATCTGTGTTGT+TGG 0.420636 2_2:+60399547 Msa0261760:CDS
ACTTATGAGTGAAGTAAATC+AGG 0.421958 2_2:+60401186 Msa0261760:CDS
AAGCCATATATGCCTTTAGT+TGG 0.422066 2_2:-60396308 None:intergenic
AAGGCCCCTTTGGATGTTGA+AGG 0.422908 2_2:+60396727 Msa0261760:CDS
AATTAAAGATATAGTGTTTG+AGG 0.424835 2_2:+60400312 Msa0261760:CDS
TGATGGTTTACTCCAACAAA+TGG 0.425908 2_2:-60399527 None:intergenic
GCCCAGAGTACTATGTGGTT+TGG 0.434095 2_2:+60396656 Msa0261760:CDS
TCACATGAGAGTAAGAAAAC+TGG 0.442455 2_2:+60397045 Msa0261760:CDS
CAGAAGTTAAGGTTGATTGT+TGG 0.450718 2_2:+60397631 Msa0261760:CDS
ACTAAAGGCATATATGGCTT+TGG 0.451900 2_2:+60396311 Msa0261760:CDS
TCTGTCTTGATCGGTAATTA+TGG 0.452701 2_2:-60399660 None:intergenic
AGAGTAAGAAAACTGGATAT+GGG 0.452789 2_2:+60397052 Msa0261760:CDS
AAGTATTGAATTTGGATTGA+AGG 0.452798 2_2:-60401167 None:intergenic
ATTTGATGAAAGAAATCGTT+GGG 0.454237 2_2:+60399916 Msa0261760:CDS
GATGGTTTACTCCAACAAAT+GGG 0.455733 2_2:-60399526 None:intergenic
GAATATGACATTTGGTGAAA+AGG 0.456326 2_2:+60399250 Msa0261760:CDS
CATGGCCAATCTGTGTTGTT+GGG 0.456597 2_2:+60399548 Msa0261760:CDS
GTTCAAGTAGTTGATGTAGT+TGG 0.457215 2_2:+60400969 Msa0261760:CDS
TTCCTCATCAATCCAAGCTA+TGG 0.458221 2_2:-60395940 None:intergenic
ATGATGATTTGTTTAAAATG+AGG 0.460118 2_2:+60400614 Msa0261760:CDS
TAAAATGAGGAATTGGATCA+AGG 0.463705 2_2:+60400627 Msa0261760:CDS
CGATGTGTTGCACATTTGAC+TGG 0.464669 2_2:+60395633 Msa0261760:CDS
GTTTCATCCAATGTCTTTGA+GGG 0.467109 2_2:-60395603 None:intergenic
ATTGAGAGATAAAGTTGAAA+AGG 0.468812 2_2:+60400075 Msa0261760:CDS
AGAGTGATTTCATGGAAAAG+TGG 0.471372 2_2:+60399840 Msa0261760:CDS
AAAAGCGGCTGGAGTTATTC+TGG 0.473677 2_2:+60396162 Msa0261760:CDS
TCCTCTAAAGAAGCATCCCC+TGG 0.474862 2_2:+60400667 Msa0261760:CDS
TCCTGGTATTTCTAGATCCA+TGG 0.475174 2_2:+60395698 Msa0261760:CDS
TGTTGTTTGTTTCAATTCAA+AGG 0.475247 2_2:+60400373 Msa0261760:CDS
CCACTGAGAGAAAATATAAG+AGG 0.477796 2_2:-60400458 None:intergenic
TCCGGAGGATATTGTTGACT+TGG 0.477890 2_2:+60395800 Msa0261760:CDS
ATGAAAACTAACCATGCATA+AGG 0.478534 2_2:-60396359 None:intergenic
ACTCCAACAAATGGGGCAAA+AGG 0.479062 2_2:-60399518 None:intergenic
AAGCGTGATAAATGGAATCC+AGG 0.480660 2_2:-60397428 None:intergenic
GTTTGCAACAACCCATAGCT+TGG 0.480813 2_2:+60395928 Msa0261760:CDS
TTGGCTTCCTTGTTCTAAAG+AGG 0.482229 2_2:+60396238 Msa0261760:CDS
GGTTATGAGAATATGACATT+TGG 0.482364 2_2:+60399242 Msa0261760:CDS
AGTATTGAATTTGGATTGAA+GGG 0.484124 2_2:-60401166 None:intergenic
TTTGGGCAGATGCGAGATGT+AGG 0.485083 2_2:+60399426 Msa0261760:CDS
GAACCATCTTCCACAATGCC+AGG 0.487132 2_2:-60400685 None:intergenic
ATACCAGGACCAAAGTCAAT+TGG 0.487294 2_2:-60395684 None:intergenic
ATTTGAATTATAAGAAAAGC+GGG 0.488915 2_2:+60395730 Msa0261760:CDS
AGGATACTAAGTCCTTTACT+TGG 0.489445 2_2:+60399591 Msa0261760:CDS
CATGTTAATGCAAAAGCGGC+TGG 0.489503 2_2:+60396151 Msa0261760:CDS
TTCCAAACCACATAGTACTC+TGG 0.490726 2_2:-60396658 None:intergenic
ATTGTGACAATGATGAAAAT+GGG 0.493723 2_2:+60396515 Msa0261760:CDS
TCAATGGTTGTTGAAGCAAA+TGG 0.495114 2_2:+60399221 Msa0261760:CDS
TGGATCAAAGTATGTGAGTA+AGG 0.495275 2_2:+60398962 Msa0261760:CDS
CTATACCGACTCGAAGTAAA+GGG 0.496353 2_2:+60400740 Msa0261760:CDS
TCATGATAATGAATGGTTGA+AGG 0.498087 2_2:+60399889 Msa0261760:CDS
CATGATAATGAATGGTTGAA+GGG 0.498314 2_2:+60399890 Msa0261760:CDS
TCCCCTGGCATTGTGGAAGA+TGG 0.500694 2_2:+60400682 Msa0261760:CDS
AGACCAATTGACTTTGGTCC+TGG 0.501001 2_2:+60395681 Msa0261760:CDS
TTGAACTTCATGATAATGAA+TGG 0.502013 2_2:+60399882 Msa0261760:CDS
CCTATACCGACTCGAAGTAA+AGG 0.502755 2_2:+60400739 Msa0261760:CDS
CTCGTCATCGATGGTGTTTG+TGG 0.503130 2_2:+60399720 Msa0261760:CDS
ACAACACAGATTGGCCATGA+TGG 0.504337 2_2:-60399544 None:intergenic
AGAATGTGTTGTCAGCTTCA+AGG 0.505580 2_2:+60396708 Msa0261760:CDS
TTATTATATTCGCAACCACT+TGG 0.506304 2_2:-60396613 None:intergenic
GAGTGATTTCATGGAAAAGT+GGG 0.506412 2_2:+60399841 Msa0261760:CDS
TTTCATGGATCTGTCTTGAT+CGG 0.508760 2_2:-60399669 None:intergenic
AACATGGAGCTTCTTCGTCC+AGG 0.509022 2_2:+60396574 Msa0261760:CDS
AGTTTCATCCAATGTCTTTG+AGG 0.511005 2_2:-60395604 None:intergenic
TTGGGCAGATGCGAGATGTA+GGG 0.512318 2_2:+60399427 Msa0261760:CDS
ATGCAAATATTCGCTATGCT+TGG 0.513428 2_2:+60396219 Msa0261760:CDS
AGGAGACTACGACTTGGGGC+TGG 0.514634 2_2:+60399299 Msa0261760:CDS
AAGAGTTATGCACAATCTAT+GGG 0.515967 2_2:+60398867 Msa0261760:CDS
GATATCACAAAAGGAGTTCA+GGG 0.518750 2_2:+60396194 Msa0261760:CDS
ACTTGCTTTGAGAGATTGGA+AGG 0.519549 2_2:+60400241 Msa0261760:CDS
ATTTGTATCTTCTGATGAAG+AGG 0.520293 2_2:+60398725 Msa0261760:CDS
CTCGGACATCTTCCACGGTT+AGG 0.520300 2_2:-60397400 None:intergenic
AAACAAGCTGATATCACAAA+AGG 0.520582 2_2:+60396185 Msa0261760:CDS
ACTGGATGTGAATTATGTAA+AGG 0.525211 2_2:+60396055 Msa0261760:CDS
AGCGTGATAAATGGAATCCA+GGG 0.526439 2_2:-60397427 None:intergenic
TGCCCATTATGAATTGTTGA+AGG 0.527570 2_2:+60397501 Msa0261760:CDS
TGGATCCTCGTTTGAAAAGG+AGG 0.528466 2_2:+60399150 Msa0261760:CDS
AACGTGTCTCTCACATATGC+AGG 0.530851 2_2:-60399941 None:intergenic
GTTGAGATTTACCGCAACTC+AGG 0.532106 2_2:+60396128 Msa0261760:CDS
CGTGTTATTGATGACGGCAA+CGG 0.532537 2_2:-60401457 None:intergenic
AATGGATTATCTCCAACTAA+AGG 0.533016 2_2:+60396296 Msa0261760:CDS
TCTTGCTTCCATCAGAAACA+TGG 0.536016 2_2:+60397450 Msa0261760:CDS
CACAGCCCAACAACACAGAT+TGG 0.536074 2_2:-60399553 None:intergenic
GGACATCTTCCACGGTTAGG+AGG 0.538132 2_2:-60397397 None:intergenic
ATTCAAAGAATTTCAAGTGG+AGG 0.539575 2_2:+60400195 Msa0261760:CDS
AGCAAAACCCTCAAAGACAT+TGG 0.540098 2_2:+60395596 Msa0261760:CDS
TCCTCATCAATCCAAGCTAT+GGG 0.543016 2_2:-60395939 None:intergenic
TCCCAAAAGCTCGTCATCGA+TGG 0.545629 2_2:+60399711 Msa0261760:CDS
AACTAACCATGCATAAGGAC+GGG 0.545894 2_2:-60396354 None:intergenic
GGAAGGAACCATGTTTCTGA+TGG 0.548366 2_2:-60397458 None:intergenic
CATCACCTTCAACATCCAAA+GGG 0.549299 2_2:-60396732 None:intergenic
GGGCTGTGCTTTATTGTCGA+AGG 0.551617 2_2:+60399568 Msa0261760:CDS
TCCAAACCACATAGTACTCT+GGG 0.555013 2_2:-60396657 None:intergenic
ATTCAAATAACTCTTGGCCA+TGG 0.556072 2_2:-60395715 None:intergenic
GATTCACGTGTTATTGATGA+CGG 0.557111 2_2:-60401463 None:intergenic
TTTGTTGGAGTAAACCATCA+TGG 0.557125 2_2:+60399530 Msa0261760:CDS
TAAAGAGGAACTGTCAAAGA+TGG 0.557475 2_2:+60396253 Msa0261760:CDS
ACCAAGTCAACAATATCCTC+CGG 0.560510 2_2:-60395801 None:intergenic
TAAAATAGCGTGCTTTGTCA+GGG 0.562727 2_2:-60399112 None:intergenic
TTGTTACCCGTCCTTATGCA+TGG 0.563613 2_2:+60396348 Msa0261760:CDS
GGTAGAATTAGAGGGTCAAG+AGG 0.566608 2_2:+60395860 Msa0261760:CDS
TTAGAACTCAATGATCAAGC+TGG 0.567016 2_2:+60399173 Msa0261760:CDS
GACATCTTCCACGGTTAGGA+GGG 0.572422 2_2:-60397396 None:intergenic
GAAATTATATAGATAAAGTG+AGG 0.574294 2_2:+60399279 Msa0261760:CDS
ACATTTGACTGGAGTTTCGT+TGG 0.574997 2_2:+60395644 Msa0261760:CDS
GCATTAACATGCCTGAGTTG+CGG 0.577708 2_2:-60396139 None:intergenic
AACCATCTTCCACAATGCCA+GGG 0.580735 2_2:-60400684 None:intergenic
TGAGAGAAAATATAAGAGGA+TGG 0.581159 2_2:-60400454 None:intergenic
AGACATACCCTTGTTAAATG+TGG 0.581997 2_2:+60400499 Msa0261760:CDS
ACATGGTTAGAGTGCATGCA+TGG 0.583025 2_2:+60399623 Msa0261760:CDS
TATTTGAATTATAAGAAAAG+CGG 0.583866 2_2:+60395729 Msa0261760:CDS
GACAGTTCCTCTTTAGAACA+AGG 0.584377 2_2:-60396245 None:intergenic
TTACTTGGTTATTCCAAACA+TGG 0.586529 2_2:+60399606 Msa0261760:CDS
GATGAAGAGGAAATTAGAGA+GGG 0.589473 2_2:+60398738 Msa0261760:CDS
AGAAGCATCCCCTGGCATTG+TGG 0.590947 2_2:+60400675 Msa0261760:CDS
TCGTGTCATAATGGGGAACA+TGG 0.593202 2_2:+60396558 Msa0261760:CDS
CTGTGCTTTATTGTCGAAGG+AGG 0.593919 2_2:+60399571 Msa0261760:CDS
ACATCACCTTCAACATCCAA+AGG 0.594096 2_2:-60396733 None:intergenic
TGTTTGGAATAACCAAGTAA+AGG 0.602120 2_2:-60399603 None:intergenic
GAGTAAGAAAACTGGATATG+GGG 0.604031 2_2:+60397053 Msa0261760:CDS
TATTTGATGAAAGAAATCGT+TGG 0.605577 2_2:+60399915 Msa0261760:CDS
AAACTAACCATGCATAAGGA+CGG 0.607038 2_2:-60396355 None:intergenic
AGAGACCCACATCGATTGAA+CGG 0.610832 2_2:+60398389 Msa0261760:CDS
GATCAAAACCACATTTAACA+AGG 0.611615 2_2:-60400507 None:intergenic
ATGATAATGAATGGTTGAAG+GGG 0.618077 2_2:+60399891 Msa0261760:CDS
CAGGCATGTTAATGCAAAAG+CGG 0.618204 2_2:+60396147 Msa0261760:CDS
TAACCGCCGTTCAATCGATG+TGG 0.619808 2_2:-60398395 None:intergenic
TGATGAAGAGGAAATTAGAG+AGG 0.620703 2_2:+60398737 Msa0261760:CDS
AGTGATCAACTTTGTCCAAG+TGG 0.624055 2_2:+60396598 Msa0261760:CDS
TAAAGTTGAAAAGGAAAACA+AGG 0.627416 2_2:+60400084 Msa0261760:CDS
TCCTATGTCGTGTCATAATG+GGG 0.627583 2_2:+60396551 Msa0261760:CDS
AACCGCCGTTCAATCGATGT+GGG 0.629169 2_2:-60398394 None:intergenic
ACCCATAGCTTGGATTGATG+AGG 0.633874 2_2:+60395938 Msa0261760:CDS
GGACAAAGTTGATCACTACC+TGG 0.641628 2_2:-60396592 None:intergenic
AGTGAGGAGACTACGACTTG+GGG 0.641932 2_2:+60399295 Msa0261760:CDS
AAAATTCAAAGAATTTCAAG+TGG 0.644675 2_2:+60400192 Msa0261760:CDS
GAATATGGAGTTCGTCACAA+TGG 0.644863 2_2:+60396278 Msa0261760:CDS
ATCAAAACCACATTTAACAA+GGG 0.648419 2_2:-60400506 None:intergenic
CTAAATATAGTTCCAACCTG+AGG 0.648571 2_2:-60398816 None:intergenic
CTGTTAACTTTAGAACACAA+AGG 0.648788 2_2:-60400414 None:intergenic
AAAGTGAGGAGACTACGACT+TGG 0.649574 2_2:+60399293 Msa0261760:CDS
ACTTGGGGCTGGAGATGCTG+AGG 0.650883 2_2:+60399310 Msa0261760:CDS
TTTGGGAGGAATGGACATGG+TGG 0.651520 2_2:+60401127 Msa0261760:CDS
ATGGTTTACTCCAACAAATG+GGG 0.652441 2_2:-60399525 None:intergenic
GGGACCTCGGACATCTTCCA+CGG 0.652749 2_2:-60397405 None:intergenic
TTTACTCTAGCATGTAGTCG+TGG 0.653028 2_2:+60398942 Msa0261760:CDS
ACCATCTTCCACAATGCCAG+GGG 0.654020 2_2:-60400683 None:intergenic
TCAATGCCCAGAGTACTATG+TGG 0.656248 2_2:+60396651 Msa0261760:CDS
AATGTGGAGGTAGAATTAGA+GGG 0.659920 2_2:+60395852 Msa0261760:CDS
ATAGCTTGGATTGATGAGGA+AGG 0.663046 2_2:+60395942 Msa0261760:CDS
GGACGCCCTTTACTTCGAGT+CGG 0.664200 2_2:-60400745 None:intergenic
TTGCGAATATAATAATGGGG+TGG 0.664400 2_2:+60396621 Msa0261760:CDS
ACAGAGTGGAAATCAACAAG+AGG 0.665527 2_2:+60400846 Msa0261760:CDS
ACTAGTGTCCCTCCTAACCG+TGG 0.667230 2_2:+60397388 Msa0261760:CDS
AGAGGAACTGTCAAAGATGG+CGG 0.668340 2_2:+60396256 Msa0261760:CDS
TCCCCATTATGACACGACAT+AGG 0.673955 2_2:-60396552 None:intergenic
CTTGTACTTTAGATGCACAC+AGG 0.674948 2_2:-60400941 None:intergenic
GCGTGATAAATGGAATCCAG+GGG 0.691814 2_2:-60397426 None:intergenic
ATATCACAAAAGGAGTTCAG+GGG 0.691881 2_2:+60396195 Msa0261760:CDS
TATCACAAAAGGAGTTCAGG+GGG 0.696143 2_2:+60396196 Msa0261760:CDS
GCCATGGATCTAGAAATACC+AGG 0.701272 2_2:-60395699 None:intergenic
ATCACCTTCAACATCCAAAG+GGG 0.709542 2_2:-60396731 None:intergenic
TGGTTGCGAATATAATAATG+GGG 0.713463 2_2:+60396618 Msa0261760:CDS
TGAATGGTTTGACTATCCGG+AGG 0.722596 2_2:+60395785 Msa0261760:CDS
CTAACCGTGGAAGATGTCCG+AGG 0.748906 2_2:+60397401 Msa0261760:CDS
CGTGATAAATGGAATCCAGG+GGG 0.750570 2_2:-60397425 None:intergenic
GACCCACATCGATTGAACGG+CGG 0.759966 2_2:+60398392 Msa0261760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTTTATTATTTAAGACAT+AGG - chr2_2:60397551-60397570 None:intergenic 10.0%
!!! AAAATTGATTTATCATATAA+AGG - chr2_2:60398554-60398573 None:intergenic 10.0%
!! ATCTAATATTCAATATTTAA+TGG + chr2_2:60400913-60400932 Msa0261760:intron 10.0%
!!! TTTAATACATATATGTTTTT+AGG + chr2_2:60401090-60401109 Msa0261760:intron 10.0%
!!! TTAATACATATATGTTTTTA+GGG + chr2_2:60401091-60401110 Msa0261760:intron 10.0%
!! TATTTGAATTATAAGAAAAG+CGG + chr2_2:60395729-60395748 Msa0261760:CDS 15.0%
!! AAAAAAATTAAATATTAGGG+TGG - chr2_2:60397221-60397240 None:intergenic 15.0%
!!! ATTTCTCGAAAAAATTATTT+TGG - chr2_2:60397700-60397719 None:intergenic 15.0%
!! AATTATATAAAAATTCTCCT+AGG - chr2_2:60397994-60398013 None:intergenic 15.0%
!! TTTATACTACTTAGTAATTA+GGG - chr2_2:60398172-60398191 None:intergenic 15.0%
!!! TTTTATACTACTTAGTAATT+AGG - chr2_2:60398173-60398192 None:intergenic 15.0%
!!! TTTTTAATTTATTGCATTAG+TGG + chr2_2:60398695-60398714 Msa0261760:intron 15.0%
!!! TAATACATATATGTTTTTAG+GGG + chr2_2:60401092-60401111 Msa0261760:intron 15.0%
!! CTTATAATTCAAATAACTCT+TGG - chr2_2:60395724-60395743 None:intergenic 20.0%
!! ATTTGAATTATAAGAAAAGC+GGG + chr2_2:60395730-60395749 Msa0261760:CDS 20.0%
!! TTATAAAACATCAAACGTTT+GGG - chr2_2:60395759-60395778 None:intergenic 20.0%
!! GAAAGATTTCAAAAACAAAA+AGG + chr2_2:60395827-60395846 Msa0261760:CDS 20.0%
!! TGAATTTATATATGGAAAAC+TGG + chr2_2:60396037-60396056 Msa0261760:CDS 20.0%
!! GTAATAAAGCAAAAAGTTAT+AGG - chr2_2:60397322-60397341 None:intergenic 20.0%
!!! TACCTTTATCCAAATAATTT+TGG + chr2_2:60397339-60397358 Msa0261760:intron 20.0%
!! AACCAAAATTATTTGGATAA+AGG - chr2_2:60397344-60397363 None:intergenic 20.0%
!!! ATTTTTTCGAGAAATTAGTT+TGG + chr2_2:60397705-60397724 Msa0261760:intron 20.0%
!!! ATGTTTTATTTTGAAATGTC+TGG + chr2_2:60398082-60398101 Msa0261760:intron 20.0%
!! TAAGTTAACTACCTTAAATT+GGG + chr2_2:60398495-60398514 Msa0261760:intron 20.0%
!!! TTTTGATATTGAAACTGATT+TGG + chr2_2:60398583-60398602 Msa0261760:intron 20.0%
!!! TGATTTTTGTTAAAGGATTT+GGG - chr2_2:60399004-60399023 None:intergenic 20.0%
!!! TTGATTTTTGTTAAAGGATT+TGG - chr2_2:60399005-60399024 None:intergenic 20.0%
!!! TTTTAGAAGTAGTAAGTTTT+TGG + chr2_2:60399130-60399149 Msa0261760:CDS 20.0%
!! GAAATTATATAGATAAAGTG+AGG + chr2_2:60399279-60399298 Msa0261760:CDS 20.0%
!!! AAATTCTTTGAATTTTGCAT+TGG - chr2_2:60400188-60400207 None:intergenic 20.0%
!! AAAATTCAAAGAATTTCAAG+TGG + chr2_2:60400192-60400211 Msa0261760:CDS 20.0%
!! AATTAAAGATATAGTGTTTG+AGG + chr2_2:60400312-60400331 Msa0261760:CDS 20.0%
!!! AATTCAAAGGTATTTTATGT+AGG + chr2_2:60400386-60400405 Msa0261760:CDS 20.0%
!!! CATTTTAAACAAATCATCAT+CGG - chr2_2:60400614-60400633 None:intergenic 20.0%
!!! ATGATGATTTGTTTAAAATG+AGG + chr2_2:60400614-60400633 Msa0261760:CDS 20.0%
!!! ATTTGTTTAAAATGAGGAAT+TGG + chr2_2:60400620-60400639 Msa0261760:CDS 20.0%
!! AATATTCAATATTTAATGGC+AGG + chr2_2:60400917-60400936 Msa0261760:intron 20.0%
!! ATATTCAATATTTAATGGCA+GGG + chr2_2:60400918-60400937 Msa0261760:intron 20.0%
!!! AATACATATATGTTTTTAGG+GGG + chr2_2:60401093-60401112 Msa0261760:intron 20.0%
!! TTTCTCTAACATTAATATTG+TGG + chr2_2:60401238-60401257 Msa0261760:intron 20.0%
!!! AAGTATTTTCCATGTTATTT+AGG + chr2_2:60401268-60401287 Msa0261760:intron 20.0%
!! TTCATGAATTGAGAATAAAA+TGG - chr2_2:60401296-60401315 None:intergenic 20.0%
!!! TGTTAGTTTTTTCTTTTTGT+AGG + chr2_2:60401414-60401433 Msa0261760:intron 20.0%
! CTTATAAAACATCAAACGTT+TGG - chr2_2:60395760-60395779 None:intergenic 25.0%
!! TGTTTTATAAGAACGATGAA+TGG + chr2_2:60395769-60395788 Msa0261760:CDS 25.0%
! CAAAAACAAAAAGGAAAATG+TGG + chr2_2:60395836-60395855 Msa0261760:CDS 25.0%
! GCTTACACTGAATTTATATA+TGG + chr2_2:60396029-60396048 Msa0261760:CDS 25.0%
! AATAAAGTGAACTGTAAACA+TGG - chr2_2:60396498-60396517 None:intergenic 25.0%
! TATTGTGACAATGATGAAAA+TGG + chr2_2:60396514-60396533 Msa0261760:CDS 25.0%
! ATTGTGACAATGATGAAAAT+GGG + chr2_2:60396515-60396534 Msa0261760:CDS 25.0%
! TAATTATCATCGAAGTGTAA+AGG + chr2_2:60396842-60396861 Msa0261760:intron 25.0%
!!! ATCTTCTGAGATTTGTTTTT+TGG + chr2_2:60397288-60397307 Msa0261760:intron 25.0%
!!! ATCCAAATAATTTTGGTTTC+TGG + chr2_2:60397346-60397365 Msa0261760:intron 25.0%
!!! TCCAAATAATTTTGGTTTCT+GGG + chr2_2:60397347-60397366 Msa0261760:intron 25.0%
! ATCAACAAAAAACATAATGC+GGG - chr2_2:60397482-60397501 None:intergenic 25.0%
! CATCAACAAAAAACATAATG+CGG - chr2_2:60397483-60397502 None:intergenic 25.0%
! TACCTTCAACAATTCATAAT+GGG - chr2_2:60397506-60397525 None:intergenic 25.0%
! ATACCTTCAACAATTCATAA+TGG - chr2_2:60397507-60397526 None:intergenic 25.0%
!! TTTAAGACATAGGAATCAAT+TGG - chr2_2:60397541-60397560 None:intergenic 25.0%
! TATGTCTCCTAATGTTTAAT+TGG + chr2_2:60397834-60397853 Msa0261760:intron 25.0%
! TAAGAAGCCAATTAAACATT+AGG - chr2_2:60397844-60397863 None:intergenic 25.0%
!! AAGAGTGAGACTTTTAAATA+AGG + chr2_2:60397907-60397926 Msa0261760:intron 25.0%
! ACAATATTACAACTTCATGT+TGG - chr2_2:60397966-60397985 None:intergenic 25.0%
!!! GCTAATTTCTAGTTAATTAG+CGG - chr2_2:60398334-60398353 None:intergenic 25.0%
! GTAAGTTAACTACCTTAAAT+TGG + chr2_2:60398494-60398513 Msa0261760:intron 25.0%
! TAAGCATTCAATACAAATCT+AGG - chr2_2:60398614-60398633 None:intergenic 25.0%
! AGTAACAAAAATACTGATGA+TGG + chr2_2:60398909-60398928 Msa0261760:CDS 25.0%
! GTAACAAAAATACTGATGAT+GGG + chr2_2:60398910-60398929 Msa0261760:CDS 25.0%
!! TTGCACTTGATTTTTGTTAA+AGG - chr2_2:60399011-60399030 None:intergenic 25.0%
! TTTAACAAAAATCAAGTGCA+AGG + chr2_2:60399010-60399029 Msa0261760:CDS 25.0%
! AATGCATGTATTTCTTTAGA+TGG + chr2_2:60399041-60399060 Msa0261760:CDS 25.0%
! TTTGTGGCATATAATGAAAA+AGG + chr2_2:60399736-60399755 Msa0261760:CDS 25.0%
!! TTGAACTTCATGATAATGAA+TGG + chr2_2:60399882-60399901 Msa0261760:CDS 25.0%
! TATTTGATGAAAGAAATCGT+TGG + chr2_2:60399915-60399934 Msa0261760:CDS 25.0%
! ATTTGATGAAAGAAATCGTT+GGG + chr2_2:60399916-60399935 Msa0261760:CDS 25.0%
! ATTGAGAGATAAAGTTGAAA+AGG + chr2_2:60400075-60400094 Msa0261760:CDS 25.0%
! TAAAGTTGAAAAGGAAAACA+AGG + chr2_2:60400084-60400103 Msa0261760:CDS 25.0%
!!! ATAGCTTGTATAAGTCATTT+TGG + chr2_2:60400133-60400152 Msa0261760:CDS 25.0%
!! TGTTGTTTGTTTCAATTCAA+AGG + chr2_2:60400373-60400392 Msa0261760:CDS 25.0%
! ATCAAAACCACATTTAACAA+GGG - chr2_2:60400509-60400528 None:intergenic 25.0%
!! AGTATTGAATTTGGATTGAA+GGG - chr2_2:60401169-60401188 None:intergenic 25.0%
!!! AAGTATTGAATTTGGATTGA+AGG - chr2_2:60401170-60401189 None:intergenic 25.0%
!!! TCACTCATAAGTATTGAATT+TGG - chr2_2:60401178-60401197 None:intergenic 25.0%
! AAAATGGAACCTAAATAACA+TGG - chr2_2:60401280-60401299 None:intergenic 25.0%
! TATTCTCAATTCATGAATCA+TGG + chr2_2:60401299-60401318 Msa0261760:CDS 25.0%
!!! TTCCTATTTTGAATTGTTAC+AGG + chr2_2:60401325-60401344 Msa0261760:CDS 25.0%
! TACCTGTAACAATTCAAAAT+AGG - chr2_2:60401330-60401349 None:intergenic 25.0%
AAACAAAAAGGAAAATGTGG+AGG + chr2_2:60395839-60395858 Msa0261760:CDS 30.0%
! TTTTCTACACATGTATCACA+TGG + chr2_2:60395893-60395912 Msa0261760:CDS 30.0%
! TTTTTCCCTGAAGTTTTTGT+TGG + chr2_2:60395972-60395991 Msa0261760:CDS 30.0%
TATCTCCAACAAAAACTTCA+GGG - chr2_2:60395980-60395999 None:intergenic 30.0%
ATATCTCCAACAAAAACTTC+AGG - chr2_2:60395981-60396000 None:intergenic 30.0%
ACTGGATGTGAATTATGTAA+AGG + chr2_2:60396055-60396074 Msa0261760:CDS 30.0%
GTAAAGGATATGTTTCTTAC+AGG + chr2_2:60396071-60396090 Msa0261760:CDS 30.0%
AAACAAGCTGATATCACAAA+AGG + chr2_2:60396185-60396204 Msa0261760:CDS 30.0%
!! AATGGATTATCTCCAACTAA+AGG + chr2_2:60396296-60396315 Msa0261760:CDS 30.0%
ATGAAAACTAACCATGCATA+AGG - chr2_2:60396362-60396381 None:intergenic 30.0%
TTATTATATTCGCAACCACT+TGG - chr2_2:60396616-60396635 None:intergenic 30.0%
AGTGGTTGCGAATATAATAA+TGG + chr2_2:60396616-60396635 Msa0261760:CDS 30.0%
GTGGTTGCGAATATAATAAT+GGG + chr2_2:60396617-60396636 Msa0261760:CDS 30.0%
TGGTTGCGAATATAATAATG+GGG + chr2_2:60396618-60396637 Msa0261760:CDS 30.0%
ATATATAACACTAACACACG+AGG - chr2_2:60396782-60396801 None:intergenic 30.0%
AGAGTAAGAAAACTGGATAT+GGG + chr2_2:60397052-60397071 Msa0261760:CDS 30.0%
! TTTTACATCTCATGTTTTCC+TGG + chr2_2:60397113-60397132 Msa0261760:intron 30.0%
!! TTGCTTTTACATAGAAAACC+AGG - chr2_2:60397134-60397153 None:intergenic 30.0%
TCCCAGAAACCAAAATTATT+TGG - chr2_2:60397351-60397370 None:intergenic 30.0%
ATGATTTCATGCAGAAGTTA+AGG + chr2_2:60397620-60397639 Msa0261760:CDS 30.0%
TGCAATGTATTCTCATTTCA+AGG + chr2_2:60397672-60397691 Msa0261760:CDS 30.0%
! GAGACTTTTAAATAAGGAGA+AGG + chr2_2:60397913-60397932 Msa0261760:intron 30.0%
! CATTTTATCATCCTCATTTC+CGG + chr2_2:60398015-60398034 Msa0261760:intron 30.0%
TTACAGTTCTTAATCGAAAC+CGG - chr2_2:60398037-60398056 None:intergenic 30.0%
! ACTCGTTTCAGAAATTTTGA+TGG + chr2_2:60398122-60398141 Msa0261760:intron 30.0%
!! AATTTCTAGTTAATTAGCGG+TGG - chr2_2:60398331-60398350 None:intergenic 30.0%
!!! GTTATCGACTCTTTTTTCAA+CGG + chr2_2:60398414-60398433 Msa0261760:intron 30.0%
ATTTGTATCTTCTGATGAAG+AGG + chr2_2:60398725-60398744 Msa0261760:CDS 30.0%
AAGAGTTATGCACAATCTAT+GGG + chr2_2:60398867-60398886 Msa0261760:CDS 30.0%
! AAGCAGAAATTTTCGATCAA+TGG + chr2_2:60399205-60399224 Msa0261760:CDS 30.0%
GGTTATGAGAATATGACATT+TGG + chr2_2:60399242-60399261 Msa0261760:CDS 30.0%
! GAATATGACATTTGGTGAAA+AGG + chr2_2:60399250-60399269 Msa0261760:CDS 30.0%
!!! TCGCTTACGAAATGTTTTTT+GGG + chr2_2:60399409-60399428 Msa0261760:CDS 30.0%
! TGTTTGGAATAACCAAGTAA+AGG - chr2_2:60399606-60399625 None:intergenic 30.0%
TTACTTGGTTATTCCAAACA+TGG + chr2_2:60399606-60399625 Msa0261760:CDS 30.0%
ATCCATGAAAAATGCAATTG+CGG + chr2_2:60399682-60399701 Msa0261760:CDS 30.0%
! TGTTTTCATAGACTCGTAAT+CGG - chr2_2:60399786-60399805 None:intergenic 30.0%
TTTGAGTAAGAGTGATTTCA+TGG + chr2_2:60399832-60399851 Msa0261760:CDS 30.0%
! TCATGATAATGAATGGTTGA+AGG + chr2_2:60399889-60399908 Msa0261760:CDS 30.0%
! CATGATAATGAATGGTTGAA+GGG + chr2_2:60399890-60399909 Msa0261760:CDS 30.0%
! ATGATAATGAATGGTTGAAG+GGG + chr2_2:60399891-60399910 Msa0261760:CDS 30.0%
!!! AGTATGAACTCGTTTTTTGA+TGG + chr2_2:60399998-60400017 Msa0261760:CDS 30.0%
! ATTCAAAGAATTTCAAGTGG+AGG + chr2_2:60400195-60400214 Msa0261760:CDS 30.0%
!! CTGTTAACTTTAGAACACAA+AGG - chr2_2:60400417-60400436 None:intergenic 30.0%
!! CTTTGTGTTCTAAAGTTAAC+AGG + chr2_2:60400415-60400434 Msa0261760:CDS 30.0%
TGAGAGAAAATATAAGAGGA+TGG - chr2_2:60400457-60400476 None:intergenic 30.0%
GATCAAAACCACATTTAACA+AGG - chr2_2:60400510-60400529 None:intergenic 30.0%
!!! TGTGGTTTTGATCATTTAGT+TGG + chr2_2:60400517-60400536 Msa0261760:CDS 30.0%
TAAAATGAGGAATTGGATCA+AGG + chr2_2:60400627-60400646 Msa0261760:CDS 30.0%
! TTAGAAGACTTCCTTTTTGA+AGG - chr2_2:60400772-60400791 None:intergenic 30.0%
!!! ACTCTGTTGACTTCTTTTTT+GGG - chr2_2:60400833-60400852 None:intergenic 30.0%
ACTTATGAGTGAAGTAAATC+AGG + chr2_2:60401186-60401205 Msa0261760:CDS 30.0%
GTTTCATCCAATGTCTTTGA+GGG - chr2_2:60395606-60395625 None:intergenic 35.0%
AGTTTCATCCAATGTCTTTG+AGG - chr2_2:60395607-60395626 None:intergenic 35.0%
!! TTTTGCAGACCAATTGACTT+TGG + chr2_2:60395675-60395694 Msa0261760:CDS 35.0%
ATTCAAATAACTCTTGGCCA+TGG - chr2_2:60395718-60395737 None:intergenic 35.0%
AAATGTGGAGGTAGAATTAG+AGG + chr2_2:60395851-60395870 Msa0261760:CDS 35.0%
AATGTGGAGGTAGAATTAGA+GGG + chr2_2:60395852-60395871 Msa0261760:CDS 35.0%
CTTACAGGAATGACTACTTT+CGG + chr2_2:60396086-60396105 Msa0261760:CDS 35.0%
TGATATCACAAAAGGAGTTC+AGG + chr2_2:60396193-60396212 Msa0261760:CDS 35.0%
GATATCACAAAAGGAGTTCA+GGG + chr2_2:60396194-60396213 Msa0261760:CDS 35.0%
ATATCACAAAAGGAGTTCAG+GGG + chr2_2:60396195-60396214 Msa0261760:CDS 35.0%
ATGCAAATATTCGCTATGCT+TGG + chr2_2:60396219-60396238 Msa0261760:CDS 35.0%
TAAAGAGGAACTGTCAAAGA+TGG + chr2_2:60396253-60396272 Msa0261760:CDS 35.0%
! TCTCCAACTAAAGGCATATA+TGG + chr2_2:60396305-60396324 Msa0261760:CDS 35.0%
AAGCCATATATGCCTTTAGT+TGG - chr2_2:60396311-60396330 None:intergenic 35.0%
! ACTAAAGGCATATATGGCTT+TGG + chr2_2:60396311-60396330 Msa0261760:CDS 35.0%
AAACTAACCATGCATAAGGA+CGG - chr2_2:60396358-60396377 None:intergenic 35.0%
! TTGCGAATATAATAATGGGG+TGG + chr2_2:60396621-60396640 Msa0261760:CDS 35.0%
TCACATGAGAGTAAGAAAAC+TGG + chr2_2:60397045-60397064 Msa0261760:CDS 35.0%
GAGAGTAAGAAAACTGGATA+TGG + chr2_2:60397051-60397070 Msa0261760:CDS 35.0%
GAGTAAGAAAACTGGATATG+GGG + chr2_2:60397053-60397072 Msa0261760:CDS 35.0%
ACAAAAAACATAATGCGGGA+AGG - chr2_2:60397478-60397497 None:intergenic 35.0%
TGCCCATTATGAATTGTTGA+AGG + chr2_2:60397501-60397520 Msa0261760:CDS 35.0%
! CAGAAGTTAAGGTTGATTGT+TGG + chr2_2:60397631-60397650 Msa0261760:CDS 35.0%
GAGAATACATTGCAGATTTC+AGG - chr2_2:60397666-60397685 None:intergenic 35.0%
TTGTAATATTGTTTGCGCCT+AGG + chr2_2:60397974-60397993 Msa0261760:intron 35.0%
TTGCAGAATTTGCCTAGATT+TGG - chr2_2:60398370-60398389 None:intergenic 35.0%
! TTCCAGAAGTCAAGTTGTAA+TGG + chr2_2:60398453-60398472 Msa0261760:intron 35.0%
TTCCATTACAACTTGACTTC+TGG - chr2_2:60398458-60398477 None:intergenic 35.0%
ATGGGTGATAACCCAATTTA+AGG - chr2_2:60398509-60398528 None:intergenic 35.0%
!! GTAGTTTGATCAGTTGATGA+GGG - chr2_2:60398532-60398551 None:intergenic 35.0%
TGATGAAGAGGAAATTAGAG+AGG + chr2_2:60398737-60398756 Msa0261760:CDS 35.0%
GATGAAGAGGAAATTAGAGA+GGG + chr2_2:60398738-60398757 Msa0261760:CDS 35.0%
TCATGAAGATGAAAAACCTC+AGG + chr2_2:60398800-60398819 Msa0261760:CDS 35.0%
CTAAATATAGTTCCAACCTG+AGG - chr2_2:60398819-60398838 None:intergenic 35.0%
CAAGAGTTATGCACAATCTA+TGG + chr2_2:60398866-60398885 Msa0261760:CDS 35.0%
! TATGCACAATCTATGGGTTT+TGG + chr2_2:60398873-60398892 Msa0261760:CDS 35.0%
TGGATCAAAGTATGTGAGTA+AGG + chr2_2:60398962-60398981 Msa0261760:CDS 35.0%
TAAAATAGCGTGCTTTGTCA+GGG - chr2_2:60399115-60399134 None:intergenic 35.0%
! TTTTGGATCCTCGTTTGAAA+AGG + chr2_2:60399147-60399166 Msa0261760:CDS 35.0%
TTAGAACTCAATGATCAAGC+TGG + chr2_2:60399173-60399192 Msa0261760:CDS 35.0%
TCAATGGTTGTTGAAGCAAA+TGG + chr2_2:60399221-60399240 Msa0261760:CDS 35.0%
!!! GTCGCTTACGAAATGTTTTT+TGG + chr2_2:60399408-60399427 Msa0261760:CDS 35.0%
! AGGGCTGCATATGAATATTT+TGG + chr2_2:60399446-60399465 Msa0261760:CDS 35.0%
ATGGTTTACTCCAACAAATG+GGG - chr2_2:60399528-60399547 None:intergenic 35.0%
GATGGTTTACTCCAACAAAT+GGG - chr2_2:60399529-60399548 None:intergenic 35.0%
TGATGGTTTACTCCAACAAA+TGG - chr2_2:60399530-60399549 None:intergenic 35.0%
TTTGTTGGAGTAAACCATCA+TGG + chr2_2:60399530-60399549 Msa0261760:CDS 35.0%
AGGATACTAAGTCCTTTACT+TGG + chr2_2:60399591-60399610 Msa0261760:CDS 35.0%
TGATCGGTAATTATGGCATT+TGG - chr2_2:60399656-60399675 None:intergenic 35.0%
TCTGTCTTGATCGGTAATTA+TGG - chr2_2:60399663-60399682 None:intergenic 35.0%
TTTCATGGATCTGTCTTGAT+CGG - chr2_2:60399672-60399691 None:intergenic 35.0%
!! GAGTATCTACTTAGCTTTTC+TGG - chr2_2:60399764-60399783 None:intergenic 35.0%
AGAGTGATTTCATGGAAAAG+TGG + chr2_2:60399840-60399859 Msa0261760:CDS 35.0%
GAGTGATTTCATGGAAAAGT+GGG + chr2_2:60399841-60399860 Msa0261760:CDS 35.0%
! ATATGTGAGAGACACGTTTT+GGG + chr2_2:60399946-60399965 Msa0261760:CDS 35.0%
!! AAGGAAAACAAGGCTGATTT+TGG + chr2_2:60400094-60400113 Msa0261760:CDS 35.0%
!! TCATACTTGCTTTGAGAGAT+TGG + chr2_2:60400237-60400256 Msa0261760:CDS 35.0%
CTCAAAGTCTTTCTCATTGA+AGG - chr2_2:60400341-60400360 None:intergenic 35.0%
CCACTGAGAGAAAATATAAG+AGG - chr2_2:60400461-60400480 None:intergenic 35.0%
! CCTCTTATATTTTCTCTCAG+TGG + chr2_2:60400458-60400477 Msa0261760:CDS 35.0%
! CTTATATTTTCTCTCAGTGG+AGG + chr2_2:60400461-60400480 Msa0261760:CDS 35.0%
AGACATACCCTTGTTAAATG+TGG + chr2_2:60400499-60400518 Msa0261760:CDS 35.0%
!!! CACTCTGTTGACTTCTTTTT+TGG - chr2_2:60400834-60400853 None:intergenic 35.0%
CAAAAAAGAAGTCAACAGAG+TGG + chr2_2:60400832-60400851 Msa0261760:CDS 35.0%
! GTTCAAGTAGTTGATGTAGT+TGG + chr2_2:60400969-60400988 Msa0261760:CDS 35.0%
!! TAGGGGGAACAAATTAGTTT+TGG + chr2_2:60401109-60401128 Msa0261760:intron 35.0%
!!! AGGGGGAACAAATTAGTTTT+GGG + chr2_2:60401110-60401129 Msa0261760:intron 35.0%
!!! CAAATTAGTTTTGGGAGGAA+TGG + chr2_2:60401118-60401137 Msa0261760:CDS 35.0%
! GATTCACGTGTTATTGATGA+CGG - chr2_2:60401466-60401485 None:intergenic 35.0%
AGCAAAACCCTCAAAGACAT+TGG + chr2_2:60395596-60395615 Msa0261760:CDS 40.0%
ACATTTGACTGGAGTTTCGT+TGG + chr2_2:60395644-60395663 Msa0261760:CDS 40.0%
ATACCAGGACCAAAGTCAAT+TGG - chr2_2:60395687-60395706 None:intergenic 40.0%
!! TCCTGGTATTTCTAGATCCA+TGG + chr2_2:60395698-60395717 Msa0261760:CDS 40.0%
CGATGAATGGTTTGACTATC+CGG + chr2_2:60395782-60395801 Msa0261760:CDS 40.0%
ACCAAGTCAACAATATCCTC+CGG - chr2_2:60395804-60395823 None:intergenic 40.0%
TCCTCATCAATCCAAGCTAT+GGG - chr2_2:60395942-60395961 None:intergenic 40.0%
TTCCTCATCAATCCAAGCTA+TGG - chr2_2:60395943-60395962 None:intergenic 40.0%
ATAGCTTGGATTGATGAGGA+AGG + chr2_2:60395942-60395961 Msa0261760:CDS 40.0%
CAGGCATGTTAATGCAAAAG+CGG + chr2_2:60396147-60396166 Msa0261760:CDS 40.0%
TATCACAAAAGGAGTTCAGG+GGG + chr2_2:60396196-60396215 Msa0261760:CDS 40.0%
!! TTGGCTTCCTTGTTCTAAAG+AGG + chr2_2:60396238-60396257 Msa0261760:CDS 40.0%
!! GACAGTTCCTCTTTAGAACA+AGG - chr2_2:60396248-60396267 None:intergenic 40.0%
GAATATGGAGTTCGTCACAA+TGG + chr2_2:60396278-60396297 Msa0261760:CDS 40.0%
AACTAACCATGCATAAGGAC+GGG - chr2_2:60396357-60396376 None:intergenic 40.0%
AGTCCTATGTCGTGTCATAA+TGG + chr2_2:60396549-60396568 Msa0261760:CDS 40.0%
GTCCTATGTCGTGTCATAAT+GGG + chr2_2:60396550-60396569 Msa0261760:CDS 40.0%
TCCTATGTCGTGTCATAATG+GGG + chr2_2:60396551-60396570 Msa0261760:CDS 40.0%
AGTGATCAACTTTGTCCAAG+TGG + chr2_2:60396598-60396617 Msa0261760:CDS 40.0%
TCCAAACCACATAGTACTCT+GGG - chr2_2:60396660-60396679 None:intergenic 40.0%
TTCCAAACCACATAGTACTC+TGG - chr2_2:60396661-60396680 None:intergenic 40.0%
TTGAAGCTGACAACACATTC+TGG - chr2_2:60396709-60396728 None:intergenic 40.0%
AGAATGTGTTGTCAGCTTCA+AGG + chr2_2:60396708-60396727 Msa0261760:CDS 40.0%
ATCACCTTCAACATCCAAAG+GGG - chr2_2:60396734-60396753 None:intergenic 40.0%
CATCACCTTCAACATCCAAA+GGG - chr2_2:60396735-60396754 None:intergenic 40.0%
ACATCACCTTCAACATCCAA+AGG - chr2_2:60396736-60396755 None:intergenic 40.0%
TTTGTCAAACACGAGTGAAG+CGG - chr2_2:60396918-60396937 None:intergenic 40.0%
AAATACCATGTGTCGTGATC+AGG - chr2_2:60397005-60397024 None:intergenic 40.0%
! TGGATATGGGGATTTTACAG+TGG + chr2_2:60397065-60397084 Msa0261760:CDS 40.0%
! ATATGGGGATTTTACAGTGG+AGG + chr2_2:60397068-60397087 Msa0261760:CDS 40.0%
AGCGTGATAAATGGAATCCA+GGG - chr2_2:60397430-60397449 None:intergenic 40.0%
AAGCGTGATAAATGGAATCC+AGG - chr2_2:60397431-60397450 None:intergenic 40.0%
! GAAGCAAGAAGCGTGATAAA+TGG - chr2_2:60397439-60397458 None:intergenic 40.0%
TCTTGCTTCCATCAGAAACA+TGG + chr2_2:60397450-60397469 Msa0261760:CDS 40.0%
GGAGAAGGAGATATCACATT+TGG + chr2_2:60397928-60397947 Msa0261760:intron 40.0%
CTTAATCGAAACCGGAAATG+AGG - chr2_2:60398029-60398048 None:intergenic 40.0%
TCTATAGCGAACCTACAACT+TGG + chr2_2:60398145-60398164 Msa0261760:intron 40.0%
CTATAGCGAACCTACAACTT+GGG + chr2_2:60398146-60398165 Msa0261760:intron 40.0%
TAGTTAATTAGCGGTGGATG+GGG - chr2_2:60398325-60398344 None:intergenic 40.0%
CTAGTTAATTAGCGGTGGAT+GGG - chr2_2:60398326-60398345 None:intergenic 40.0%
TCTAGTTAATTAGCGGTGGA+TGG - chr2_2:60398327-60398346 None:intergenic 40.0%
ACCTGCACTAAACCAAATCT+AGG + chr2_2:60398355-60398374 Msa0261760:intron 40.0%
!! TTGATCAGTTGATGAGGGAT+GGG - chr2_2:60398527-60398546 None:intergenic 40.0%
!! TTTGATCAGTTGATGAGGGA+TGG - chr2_2:60398528-60398547 None:intergenic 40.0%
! GGTAGTTTGATCAGTTGATG+AGG - chr2_2:60398533-60398552 None:intergenic 40.0%
GAAGATGAAAAACCTCAGGT+TGG + chr2_2:60398804-60398823 Msa0261760:CDS 40.0%
TTTACTCTAGCATGTAGTCG+TGG + chr2_2:60398942-60398961 Msa0261760:CDS 40.0%
CTAAAATAGCGTGCTTTGTC+AGG - chr2_2:60399116-60399135 None:intergenic 40.0%
! TCTAACCTCCTTTTCAAACG+AGG - chr2_2:60399158-60399177 None:intergenic 40.0%
! AGCCGCAATTGCATTTTTCA+TGG - chr2_2:60399687-60399706 None:intergenic 40.0%
! CATATGTGAGAGACACGTTT+TGG + chr2_2:60399945-60399964 Msa0261760:CDS 40.0%
! TTGCATTGGTGAATGCTTTC+TGG - chr2_2:60400174-60400193 None:intergenic 40.0%
!! ACTTGCTTTGAGAGATTGGA+AGG + chr2_2:60400241-60400260 Msa0261760:CDS 40.0%
! TATTTTCTCTCAGTGGAGGA+AGG + chr2_2:60400465-60400484 Msa0261760:CDS 40.0%
CTTTACTTCGAGTCGGTATA+GGG - chr2_2:60400741-60400760 None:intergenic 40.0%
!! CTATACCGACTCGAAGTAAA+GGG + chr2_2:60400740-60400759 Msa0261760:CDS 40.0%
!! GAAGACTTCCTTTTTGAAGG+AGG - chr2_2:60400769-60400788 None:intergenic 40.0%
ACAGAGTGGAAATCAACAAG+AGG + chr2_2:60400846-60400865 Msa0261760:CDS 40.0%
CTTGTACTTTAGATGCACAC+AGG - chr2_2:60400944-60400963 None:intergenic 40.0%
!!! GGGAACAAATTAGTTTTGGG+AGG + chr2_2:60401113-60401132 Msa0261760:CDS 40.0%
CGATGTGTTGCACATTTGAC+TGG + chr2_2:60395633-60395652 Msa0261760:CDS 45.0%
! AGACCAATTGACTTTGGTCC+TGG + chr2_2:60395681-60395700 Msa0261760:CDS 45.0%
GCCATGGATCTAGAAATACC+AGG - chr2_2:60395702-60395721 None:intergenic 45.0%
TGAATGGTTTGACTATCCGG+AGG + chr2_2:60395785-60395804 Msa0261760:CDS 45.0%
! TCCGGAGGATATTGTTGACT+TGG + chr2_2:60395800-60395819 Msa0261760:CDS 45.0%
GGTAGAATTAGAGGGTCAAG+AGG + chr2_2:60395860-60395879 Msa0261760:CDS 45.0%
GTTTGCAACAACCCATAGCT+TGG + chr2_2:60395928-60395947 Msa0261760:CDS 45.0%
ACCCATAGCTTGGATTGATG+AGG + chr2_2:60395938-60395957 Msa0261760:CDS 45.0%
GTTGAGATTTACCGCAACTC+AGG + chr2_2:60396128-60396147 Msa0261760:CDS 45.0%
GCATTAACATGCCTGAGTTG+CGG - chr2_2:60396142-60396161 None:intergenic 45.0%
CATGTTAATGCAAAAGCGGC+TGG + chr2_2:60396151-60396170 Msa0261760:CDS 45.0%
AAAAGCGGCTGGAGTTATTC+TGG + chr2_2:60396162-60396181 Msa0261760:CDS 45.0%
AGAGGAACTGTCAAAGATGG+CGG + chr2_2:60396256-60396275 Msa0261760:CDS 45.0%
!! CTGTCAAAGATGGCGGAATA+TGG + chr2_2:60396263-60396282 Msa0261760:CDS 45.0%
TTGTTACCCGTCCTTATGCA+TGG + chr2_2:60396348-60396367 Msa0261760:CDS 45.0%
TCCCCATTATGACACGACAT+AGG - chr2_2:60396555-60396574 None:intergenic 45.0%
! TCGTGTCATAATGGGGAACA+TGG + chr2_2:60396558-60396577 Msa0261760:CDS 45.0%
! GGACAAAGTTGATCACTACC+TGG - chr2_2:60396595-60396614 None:intergenic 45.0%
! TCAATGCCCAGAGTACTATG+TGG + chr2_2:60396651-60396670 Msa0261760:CDS 45.0%
!! TTTGGTTTCTGGGATACCTC+AGG + chr2_2:60397357-60397376 Msa0261760:intron 45.0%
ACACTAGTAGCATTTGCCTG+AGG - chr2_2:60397376-60397395 None:intergenic 45.0%
CGTGATAAATGGAATCCAGG+GGG - chr2_2:60397428-60397447 None:intergenic 45.0%
GCGTGATAAATGGAATCCAG+GGG - chr2_2:60397429-60397448 None:intergenic 45.0%
! GGAAGGAACCATGTTTCTGA+TGG - chr2_2:60397461-60397480 None:intergenic 45.0%
TTCTTACAGACACCACTAGG+TGG + chr2_2:60397858-60397877 Msa0261760:intron 45.0%
GTAATTAGGGCCCAAGTTGT+AGG - chr2_2:60398159-60398178 None:intergenic 45.0%
!! TGTGTCGGGTTGAAAAGTGT+CGG - chr2_2:60398221-60398240 None:intergenic 45.0%
TGTCACTCTCGTGAATGTGT+CGG - chr2_2:60398236-60398255 None:intergenic 45.0%
ACACATTCACGAGAGTGACA+TGG + chr2_2:60398236-60398255 Msa0261760:intron 45.0%
! GCCTAGATTTGGTTTAGTGC+AGG - chr2_2:60398359-60398378 None:intergenic 45.0%
! AGAGACCCACATCGATTGAA+CGG + chr2_2:60398389-60398408 Msa0261760:CDS 45.0%
!!! CGACTCTTTTTTCAACGGCA+AGG + chr2_2:60398419-60398438 Msa0261760:intron 45.0%
TGGATCCTCGTTTGAAAAGG+AGG + chr2_2:60399150-60399169 Msa0261760:CDS 45.0%
AAAGTGAGGAGACTACGACT+TGG + chr2_2:60399293-60399312 Msa0261760:CDS 45.0%
AAGTGAGGAGACTACGACTT+GGG + chr2_2:60399294-60399313 Msa0261760:CDS 45.0%
! ATGCCTTTTGCCCCATTTGT+TGG + chr2_2:60399515-60399534 Msa0261760:CDS 45.0%
ACTCCAACAAATGGGGCAAA+AGG - chr2_2:60399521-60399540 None:intergenic 45.0%
! ACAACACAGATTGGCCATGA+TGG - chr2_2:60399547-60399566 None:intergenic 45.0%
TCATGGCCAATCTGTGTTGT+TGG + chr2_2:60399547-60399566 Msa0261760:CDS 45.0%
! CATGGCCAATCTGTGTTGTT+GGG + chr2_2:60399548-60399567 Msa0261760:CDS 45.0%
! CTGTGCTTTATTGTCGAAGG+AGG + chr2_2:60399571-60399590 Msa0261760:CDS 45.0%
GCATGCACTCTAACCATGTT+TGG - chr2_2:60399622-60399641 None:intergenic 45.0%
ACATGGTTAGAGTGCATGCA+TGG + chr2_2:60399623-60399642 Msa0261760:CDS 45.0%
! ACCATCGATGACGAGCTTTT+GGG - chr2_2:60399715-60399734 None:intergenic 45.0%
AACGTGTCTCTCACATATGC+AGG - chr2_2:60399944-60399963 None:intergenic 45.0%
AACCATCTTCCACAATGCCA+GGG - chr2_2:60400687-60400706 None:intergenic 45.0%
CCTTTACTTCGAGTCGGTAT+AGG - chr2_2:60400742-60400761 None:intergenic 45.0%
!! CCTATACCGACTCGAAGTAA+AGG + chr2_2:60400739-60400758 Msa0261760:CDS 45.0%
!!! AGTTTTGGGAGGAATGGACA+TGG + chr2_2:60401124-60401143 Msa0261760:CDS 45.0%
!! CGTGTTATTGATGACGGCAA+CGG - chr2_2:60401460-60401479 None:intergenic 45.0%
!! ATAAAAAATTATTTACAATT+TGG + chr2_2:60396812-60396831 Msa0261760:intron 5.0%
!! AGAAAAAAAATTAAATATTA+GGG - chr2_2:60397224-60397243 None:intergenic 5.0%
!! AAGAAAAAAAATTAAATATT+AGG - chr2_2:60397225-60397244 None:intergenic 5.0%
AACATGGAGCTTCTTCGTCC+AGG + chr2_2:60396574-60396593 Msa0261760:CDS 50.0%
! GCCCAGAGTACTATGTGGTT+TGG + chr2_2:60396656-60396675 Msa0261760:CDS 50.0%
AAGGCCCCTTTGGATGTTGA+AGG + chr2_2:60396727-60396746 Msa0261760:CDS 50.0%
GTCTTCCTGATCACGACACA+TGG + chr2_2:60396997-60397016 Msa0261760:intron 50.0%
GACATCTTCCACGGTTAGGA+GGG - chr2_2:60397399-60397418 None:intergenic 50.0%
GGCTTCTTACAGACACCACT+AGG + chr2_2:60397855-60397874 Msa0261760:intron 50.0%
TTACAGACACCACTAGGTGG+AGG + chr2_2:60397861-60397880 Msa0261760:intron 50.0%
CCACTAGGTGGAGGATCAAA+CGG + chr2_2:60397870-60397889 Msa0261760:intron 50.0%
!! GTGTCGGGTTGAAAAGTGTC+GGG - chr2_2:60398220-60398239 None:intergenic 50.0%
GTCACTCTCGTGAATGTGTC+GGG - chr2_2:60398235-60398254 None:intergenic 50.0%
AACCGCCGTTCAATCGATGT+GGG - chr2_2:60398397-60398416 None:intergenic 50.0%
TAACCGCCGTTCAATCGATG+TGG - chr2_2:60398398-60398417 None:intergenic 50.0%
AGTGAGGAGACTACGACTTG+GGG + chr2_2:60399295-60399314 Msa0261760:CDS 50.0%
TTTGGGCAGATGCGAGATGT+AGG + chr2_2:60399426-60399445 Msa0261760:CDS 50.0%
TTGGGCAGATGCGAGATGTA+GGG + chr2_2:60399427-60399446 Msa0261760:CDS 50.0%
CACAGCCCAACAACACAGAT+TGG - chr2_2:60399556-60399575 None:intergenic 50.0%
! GGGCTGTGCTTTATTGTCGA+AGG + chr2_2:60399568-60399587 Msa0261760:CDS 50.0%
TCCCAAAAGCTCGTCATCGA+TGG + chr2_2:60399711-60399730 Msa0261760:CDS 50.0%
! CACCATCGATGACGAGCTTT+TGG - chr2_2:60399716-60399735 None:intergenic 50.0%
CTCGTCATCGATGGTGTTTG+TGG + chr2_2:60399720-60399739 Msa0261760:CDS 50.0%
!! TGTGAGAGACACGTTTTGGG+CGG + chr2_2:60399949-60399968 Msa0261760:CDS 50.0%
!! TCCTCTAAAGAAGCATCCCC+TGG + chr2_2:60400667-60400686 Msa0261760:CDS 50.0%
ACCATCTTCCACAATGCCAG+GGG - chr2_2:60400686-60400705 None:intergenic 50.0%
GAACCATCTTCCACAATGCC+AGG - chr2_2:60400688-60400707 None:intergenic 50.0%
!! AAGGGCGTCCTCCTTCAAAA+AGG + chr2_2:60400758-60400777 Msa0261760:CDS 50.0%
TTTGGGAGGAATGGACATGG+TGG + chr2_2:60401127-60401146 Msa0261760:CDS 50.0%
TGTCAGCTTCAAGGCCCCTT+TGG + chr2_2:60396717-60396736 Msa0261760:CDS 55.0%
ACTAGTGTCCCTCCTAACCG+TGG + chr2_2:60397388-60397407 Msa0261760:CDS 55.0%
GGACATCTTCCACGGTTAGG+AGG - chr2_2:60397400-60397419 None:intergenic 55.0%
CTCGGACATCTTCCACGGTT+AGG - chr2_2:60397403-60397422 None:intergenic 55.0%
CTAACCGTGGAAGATGTCCG+AGG + chr2_2:60397401-60397420 Msa0261760:CDS 55.0%
AATGGAATCCAGGGGGACCT+CGG - chr2_2:60397421-60397440 None:intergenic 55.0%
CCGTTTGATCCTCCACCTAG+TGG - chr2_2:60397873-60397892 None:intergenic 55.0%
! GACCCACATCGATTGAACGG+CGG + chr2_2:60398392-60398411 Msa0261760:CDS 55.0%
!! GTGAGAGACACGTTTTGGGC+GGG + chr2_2:60399950-60399969 Msa0261760:CDS 55.0%
GCCAGGGGATGCTTCTTTAG+AGG - chr2_2:60400671-60400690 None:intergenic 55.0%
!! AGAAGCATCCCCTGGCATTG+TGG + chr2_2:60400675-60400694 Msa0261760:CDS 55.0%
TCCCCTGGCATTGTGGAAGA+TGG + chr2_2:60400682-60400701 Msa0261760:CDS 55.0%
GGACGCCCTTTACTTCGAGT+CGG - chr2_2:60400748-60400767 None:intergenic 55.0%
GGGACCTCGGACATCTTCCA+CGG - chr2_2:60397408-60397427 None:intergenic 60.0%
! AGGAGACTACGACTTGGGGC+TGG + chr2_2:60399299-60399318 Msa0261760:CDS 60.0%
ACTTGGGGCTGGAGATGCTG+AGG + chr2_2:60399310-60399329 Msa0261760:CDS 60.0%
GAAGATGTCCGAGGTCCCCC+TGG + chr2_2:60397410-60397429 Msa0261760:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 60395591 60401489 60395591 ID=Msa0261760;Name=Msa0261760
chr2_2 mRNA 60395591 60401489 60395591 ID=Msa0261760-mRNA-1;Parent=Msa0261760;Name=Msa0261760-mRNA-1;_AED=0.37;_eAED=0.22;_QI=0|0.2|0.09|0.45|1|1|11|0|1262
chr2_2 exon 60395591 60396369 60395591 ID=Msa0261760-mRNA-1:exon:18571;Parent=Msa0261760-mRNA-1
chr2_2 exon 60396507 60396748 60396507 ID=Msa0261760-mRNA-1:exon:18572;Parent=Msa0261760-mRNA-1
chr2_2 exon 60397034 60397095 60397034 ID=Msa0261760-mRNA-1:exon:18573;Parent=Msa0261760-mRNA-1
chr2_2 exon 60397379 60397522 60397379 ID=Msa0261760-mRNA-1:exon:18574;Parent=Msa0261760-mRNA-1
chr2_2 exon 60397601 60397693 60397601 ID=Msa0261760-mRNA-1:exon:18575;Parent=Msa0261760-mRNA-1
chr2_2 exon 60398377 60398413 60398377 ID=Msa0261760-mRNA-1:exon:18576;Parent=Msa0261760-mRNA-1
chr2_2 exon 60398715 60400867 60398715 ID=Msa0261760-mRNA-1:exon:18577;Parent=Msa0261760-mRNA-1
chr2_2 exon 60400939 60401010 60400939 ID=Msa0261760-mRNA-1:exon:18578;Parent=Msa0261760-mRNA-1
chr2_2 exon 60401112 60401207 60401112 ID=Msa0261760-mRNA-1:exon:18579;Parent=Msa0261760-mRNA-1
chr2_2 exon 60401290 60401346 60401290 ID=Msa0261760-mRNA-1:exon:18580;Parent=Msa0261760-mRNA-1
chr2_2 exon 60401436 60401489 60401436 ID=Msa0261760-mRNA-1:exon:18581;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60395591 60396369 60395591 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60396507 60396748 60396507 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60397034 60397095 60397034 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60397379 60397522 60397379 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60397601 60397693 60397601 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60398377 60398413 60398377 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60398715 60400867 60398715 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60400939 60401010 60400939 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60401112 60401207 60401112 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60401290 60401346 60401290 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
chr2_2 CDS 60401436 60401489 60401436 ID=Msa0261760-mRNA-1:cds;Parent=Msa0261760-mRNA-1
Gene Sequence

>Msa0261760

ATGGAAGCAAAACCCTCAAAGACATTGGATGAAACTGCTACTCGATGTGTTGCACATTTGACTGGAGTTTCGTTGGTTGAAGATTTTTGCAGACCAATTGACTTTGGTCCTGGTATTTCTAGATCCATGGCCAAGAGTTATTTGAATTATAAGAAAAGCGGGATGCCCAAACGTTTGATGTTTTATAAGAACGATGAATGGTTTGACTATCCGGAGGATATTGTTGACTTGGTTAAGAAAGATTTCAAAAACAAAAAGGAAAATGTGGAGGTAGAATTAGAGGGTCAAGAGGTTGTGCTAGATTTTCTACACATGTATCACATGGATATGAAAACAAGTTTGCAACAACCCATAGCTTGGATTGATGAGGAAGGCAACTGCTTTTTCCCTGAAGTTTTTGTTGGAGATATTAAGCAAGAGCTAGATGAAGATTTAGATGCTTACACTGAATTTATATATGGAAAACTGGATGTGAATTATGTAAAGGATATGTTTCTTACAGGAATGACTACTTTCGGCATTACAAAGTCTGACATTGTTGAGATTTACCGCAACTCAGGCATGTTAATGCAAAAGCGGCTGGAGTTATTCTGGAAACAAGCTGATATCACAAAAGGAGTTCAGGGGGATGCAAATATTCGCTATGCTTGGCTTCCTTGTTCTAAAGAGGAACTGTCAAAGATGGCGGAATATGGAGTTCGTCACAATGGATTATCTCCAACTAAAGGCATATATGGCTTTGGTGTTCATCTTACAGTTGTTACCCGTCCTTATGCATGTTCACTTTATTGTGACAATGATGAAAATGGGTTTAAACATTTAGTCCTATGTCGTGTCATAATGGGGAACATGGAGCTTCTTCGTCCAGGTAGTGATCAACTTTGTCCAAGTGGTTGCGAATATAATAATGGGGTGGATGACATTCAATGCCCAGAGTACTATGTGGTTTGGAACATGAACATGAACACACATATCTATCCAGAATGTGTTGTCAGCTTCAAGGCCCCTTTGGATGTTGAAGAAAATGTTTATTCACATGAGAGTAAGAAAACTGGATATGGGGATTTTACAGTGGAGGACATTGCAAATGCTACTAGTGTCCCTCCTAACCGTGGAAGATGTCCGAGGTCCCCCTGGATTCCATTTATCACGCTTCTTGCTTCCATCAGAAACATGGTTCCTTCCCGCATTATGTTTTTTGTTGATGCCCATTATGAATTGTTGAAGTCAAAGAAGATTTCTCGTGATGATTTCATGCAGAAGTTAAGGTTGATTGTTGGATCTAATTTCCTGAAATCTGCAATGTATTCTCATTTCAAGGCAAATTCTGCAAGAGACCCACATCGATTGAACGGCGTGGAAGAAGTATTTGTATCTTCTGATGAAGAGGAAATTAGAGAGGGAAATAATAATTTTGATGATAGTTTAGAAGAAGATATTGTTCATGAAGATGAAAAACCTCAGGTTGGAACTATATTTAGCTCTAAAGATGAACTTTTTGAGTATTACAAGAGTTATGCACAATCTATGGGTTTTGGAGTTACTAAACTTAGTAACAAAAATACTGATGATGGGAAAAAATACTTTACTCTAGCATGTAGTCGTGGATCAAAGTATGTGAGTAAGGCGAAGAAGCTTTTGAACCCAAATCCTTTAACAAAAATCAAGTGCAAGGCTAGATTGAATGCATGTATTTCTTTAGATGGAACTGTTACTATTACAAAACTTTTTCTTGAGCATAATCATGATCTAATCCCTGACAAAGCACGCTATTTTAGAAGTAGTAAGTTTTTGGATCCTCGTTTGAAAAGGAGGTTAGAACTCAATGATCAAGCTGGAATAAATGTAAGCAGAAATTTTCGATCAATGGTTGTTGAAGCAAATGGTTATGAGAATATGACATTTGGTGAAAAGGACTGTAGAAATTATATAGATAAAGTGAGGAGACTACGACTTGGGGCTGGAGATGCTGAGGCTATTCAAAATTATTTCGTTAAAATGCAAAAGCAAAATAGTCAGTTCTATTATGTAATAGACATTGATGATAAAAGTCGCTTACGAAATGTTTTTTGGGCAGATGCGAGATGTAGGGCTGCATATGAATATTTTGGTGAAGTCGTAACATTTGACACTACTTACTTAACAAATAAGTATGACATGCCTTTTGCCCCATTTGTTGGAGTAAACCATCATGGCCAATCTGTGTTGTTGGGCTGTGCTTTATTGTCGAAGGAGGATACTAAGTCCTTTACTTGGTTATTCCAAACATGGTTAGAGTGCATGCATGGACGTGCTCCAAATGCCATAATTACCGATCAAGACAGATCCATGAAAAATGCAATTGCGGCTGTTTTCCCAAAAGCTCGTCATCGATGGTGTTTGTGGCATATAATGAAAAAGGTTCCAGAAAAGCTAAGTAGATACTCCGATTACGAGTCTATGAAAACACTTTTGCATGATGCTGTATATGATTCTTTGAGTAAGAGTGATTTCATGGAAAAGTGGGAAAGAATGATTGAAGATTTTGAACTTCATGATAATGAATGGTTGAAGGGGTTATTTGATGAAAGAAATCGTTGGGTTCCTGCATATGTGAGAGACACGTTTTGGGCGGGAATGTCAACGACTCAAAGAAGTGAAAGTATGAACTCGTTTTTTGATGGATATGTAAATTCAAAGACAGCATTGAAGCAATTTGTTGAACAATATGACAATGCATTGAGAGATAAAGTTGAAAAGGAAAACAAGGCTGATTTTGGTTCATTTAATACAGTGATAGCTTGTATAAGTCATTTTGGCTTTGAGTTGCAATTCCAGAAAGCATTCACCAATGCAAAATTCAAAGAATTTCAAGTGGAGGTTGCTTCTATGATTTACTGTCATACTTGCTTTGAGAGATTGGAAGGATCAAATTCTATATATTCTGTTATAGAGAGCAAGAAAAACTTCGACATAATTAAAGATATAGTGTTTGAGGTATCCTTCAATGAGAAAGACTTTGAGTTACGTTGTATGTGTTGTTTGTTTCAATTCAAAGGTATTTTATGTAGGCACATCCTTTGTGTTCTAAAGTTAACAGGAAAAACAGAGTCATTGCCATCCTCTTATATTTTCTCTCAGTGGAGGAAGGATATAAGACGAAGACATACCCTTGTTAAATGTGGTTTTGATCATTTAGTTGGAAATGCTAAATTGCAAAGAGTTGATAAAGCATGTGCTGACTTTTATGAAGTTGCTTCTGAGGTGATTAATACCGATGATGATTTGTTTAAAATGAGGAATTGGATCAAGGAAGTAAAAAATGAGTTTTCCTCTAAAGAAGCATCCCCTGGCATTGTGGAAGATGGTTCAGTTCAAAATCAAGTGATTAAAATTCTTGACCCTATACCGACTCGAAGTAAAGGGCGTCCTCCTTCAAAAAGGAAGTCTTCTAAAGTTGATCAAATTGTGAAGAAAATTTCAAAAAAGAAGACCCAAAAAAGAAGTCAACAGAGTGGAAATCAACAAGAGGGCCTGTGTGCATCTAAAGTACAAGAGAGTGTTCAAGTAGTTGATGTAGTTGGCACACAAGACAGTGTTCAAGGGGAACAAATTAGTTTTGGGAGGAATGGACATGGTGGTGTAAATAATTTAGCTCCCTTCAATCCAAATTCAATACTTATGAGTGAAGTAAATCAGGTTCCATTTTATTCTCAATTCATGAATCATGGTGTTTCCTATTTTGAATTGTTACAGGCACAACACAATGTGAATGATCCGTTGCCGTCATCAATAACACGTGAATCATAA
Protein sequence

>Msa0261760

MEAKPSKTLDETATRCVAHLTGVSLVEDFCRPIDFGPGISRSMAKSYLNYKKSGMPKRLMFYKNDEWFDYPEDIVDLVKKDFKNKKENVEVELEGQEVVLDFLHMYHMDMKTSLQQPIAWIDEEGNCFFPEVFVGDIKQELDEDLDAYTEFIYGKLDVNYVKDMFLTGMTTFGITKSDIVEIYRNSGMLMQKRLELFWKQADITKGVQGDANIRYAWLPCSKEELSKMAEYGVRHNGLSPTKGIYGFGVHLTVVTRPYACSLYCDNDENGFKHLVLCRVIMGNMELLRPGSDQLCPSGCEYNNGVDDIQCPEYYVVWNMNMNTHIYPECVVSFKAPLDVEENVYSHESKKTGYGDFTVEDIANATSVPPNRGRCPRSPWIPFITLLASIRNMVPSRIMFFVDAHYELLKSKKISRDDFMQKLRLIVGSNFLKSAMYSHFKANSARDPHRLNGVEEVFVSSDEEEIREGNNNFDDSLEEDIVHEDEKPQVGTIFSSKDELFEYYKSYAQSMGFGVTKLSNKNTDDGKKYFTLACSRGSKYVSKAKKLLNPNPLTKIKCKARLNACISLDGTVTITKLFLEHNHDLIPDKARYFRSSKFLDPRLKRRLELNDQAGINVSRNFRSMVVEANGYENMTFGEKDCRNYIDKVRRLRLGAGDAEAIQNYFVKMQKQNSQFYYVIDIDDKSRLRNVFWADARCRAAYEYFGEVVTFDTTYLTNKYDMPFAPFVGVNHHGQSVLLGCALLSKEDTKSFTWLFQTWLECMHGRAPNAIITDQDRSMKNAIAAVFPKARHRWCLWHIMKKVPEKLSRYSDYESMKTLLHDAVYDSLSKSDFMEKWERMIEDFELHDNEWLKGLFDERNRWVPAYVRDTFWAGMSTTQRSESMNSFFDGYVNSKTALKQFVEQYDNALRDKVEKENKADFGSFNTVIACISHFGFELQFQKAFTNAKFKEFQVEVASMIYCHTCFERLEGSNSIYSVIESKKNFDIIKDIVFEVSFNEKDFELRCMCCLFQFKGILCRHILCVLKLTGKTESLPSSYIFSQWRKDIRRRHTLVKCGFDHLVGNAKLQRVDKACADFYEVASEVINTDDDLFKMRNWIKEVKNEFSSKEASPGIVEDGSVQNQVIKILDPIPTRSKGRPPSKRKSSKVDQIVKKISKKKTQKRSQQSGNQQEGLCASKVQESVQVVDVVGTQDSVQGEQISFGRNGHGGVNNLAPFNPNSILMSEVNQVPFYSQFMNHGVSYFELLQAQHNVNDPLPSSITRES*