Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272970 | XP_039686069.1 | 83.838 | 495 | 78 | 1 | 1 | 493 | 1 | 495 | 0.0 | 886 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272970 | sp|Q9SWG3|FAR1_ARATH | 47.799 | 477 | 240 | 3 | 20 | 491 | 42 | 514 | 2.60e-167 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272970 | A0A2K3NGL2 | 76.048 | 501 | 112 | 1 | 1 | 493 | 1 | 501 | 0.0 | 818 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0272970 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272970 | MtrunA17_Chr1g0207551 | 50.866 | 462 | 225 | 1 | 32 | 491 | 33 | 494 | 4.41e-169 | 497 |
| Msa0272970 | MtrunA17_Chr2g0329031 | 48.060 | 464 | 232 | 3 | 31 | 492 | 12 | 468 | 3.78e-164 | 482 |
| Msa0272970 | MtrunA17_Chr3g0080351 | 47.170 | 477 | 212 | 3 | 32 | 491 | 75 | 528 | 5.24e-157 | 467 |
| Msa0272970 | MtrunA17_Chr2g0296781 | 46.827 | 457 | 238 | 3 | 37 | 491 | 1 | 454 | 9.21e-140 | 419 |
| Msa0272970 | MtrunA17_Chr5g0448761 | 42.887 | 471 | 256 | 6 | 32 | 490 | 59 | 528 | 1.04e-134 | 408 |
| Msa0272970 | MtrunA17_Chr1g0202341 | 39.511 | 491 | 278 | 6 | 16 | 490 | 25 | 512 | 3.58e-125 | 380 |
| Msa0272970 | MtrunA17_Chr6g0477261 | 52.478 | 343 | 162 | 1 | 149 | 491 | 2 | 343 | 1.56e-120 | 367 |
| Msa0272970 | MtrunA17_Chr1g0196541 | 40.919 | 457 | 263 | 3 | 37 | 490 | 1 | 453 | 1.51e-117 | 362 |
| Msa0272970 | MtrunA17_Chr5g0441581 | 39.916 | 476 | 266 | 6 | 25 | 491 | 18 | 482 | 2.39e-116 | 358 |
| Msa0272970 | MtrunA17_Chr2g0291581 | 38.065 | 465 | 277 | 4 | 28 | 492 | 66 | 519 | 4.98e-104 | 325 |
| Msa0272970 | MtrunA17_Chr2g0291591 | 34.341 | 463 | 303 | 1 | 29 | 491 | 60 | 521 | 7.76e-101 | 314 |
| Msa0272970 | MtrunA17_Chr5g0440451 | 35.759 | 481 | 274 | 7 | 32 | 491 | 42 | 508 | 1.02e-94 | 307 |
| Msa0272970 | MtrunA17_Chr5g0448511 | 43.189 | 301 | 170 | 1 | 190 | 490 | 1 | 300 | 7.64e-90 | 285 |
| Msa0272970 | MtrunA17_Chr2g0287651 | 33.775 | 453 | 282 | 7 | 35 | 477 | 77 | 521 | 3.64e-88 | 288 |
| Msa0272970 | MtrunA17_Chr8g0363841 | 32.981 | 473 | 310 | 5 | 25 | 491 | 9 | 480 | 3.38e-87 | 281 |
| Msa0272970 | MtrunA17_Chr3g0118611 | 46.713 | 289 | 152 | 1 | 202 | 490 | 118 | 404 | 3.66e-85 | 278 |
| Msa0272970 | MtrunA17_Chr2g0324011 | 33.405 | 467 | 302 | 5 | 32 | 491 | 9 | 473 | 1.89e-84 | 272 |
| Msa0272970 | MtrunA17_Chr2g0287061 | 34.690 | 467 | 268 | 7 | 24 | 490 | 174 | 603 | 8.47e-83 | 273 |
| Msa0272970 | MtrunA17_Chr1g0203051 | 32.692 | 468 | 295 | 8 | 22 | 477 | 64 | 523 | 2.41e-81 | 265 |
| Msa0272970 | MtrunA17_Chr3g0082121 | 32.427 | 478 | 299 | 8 | 27 | 490 | 31 | 498 | 1.62e-79 | 261 |
| Msa0272970 | MtrunA17_Chr1g0198761 | 33.141 | 519 | 310 | 11 | 2 | 490 | 8 | 519 | 2.30e-79 | 263 |
| Msa0272970 | MtrunA17_Chr2g0276841 | 30.672 | 476 | 312 | 10 | 29 | 490 | 66 | 537 | 9.31e-73 | 244 |
| Msa0272970 | MtrunA17_Chr1g0203721 | 30.454 | 463 | 315 | 3 | 35 | 490 | 65 | 527 | 1.37e-70 | 241 |
| Msa0272970 | MtrunA17_Chr5g0431001 | 33.638 | 437 | 259 | 10 | 26 | 438 | 52 | 481 | 3.65e-69 | 229 |
| Msa0272970 | MtrunA17_Chr6g0458391 | 28.667 | 450 | 294 | 4 | 33 | 475 | 225 | 654 | 4.75e-68 | 232 |
| Msa0272970 | MtrunA17_Chr6g0458391 | 30.719 | 153 | 98 | 3 | 4 | 148 | 58 | 210 | 1.69e-12 | 70.1 |
| Msa0272970 | MtrunA17_Chr2g0294841 | 28.211 | 475 | 320 | 10 | 33 | 490 | 45 | 515 | 1.22e-59 | 209 |
| Msa0272970 | MtrunA17_Chr2g0290391 | 27.290 | 513 | 326 | 14 | 5 | 490 | 28 | 520 | 7.79e-58 | 203 |
| Msa0272970 | MtrunA17_Chr1g0164591 | 32.808 | 317 | 202 | 4 | 106 | 421 | 2 | 308 | 7.25e-57 | 192 |
| Msa0272970 | MtrunA17_Chr7g0258861 | 33.217 | 286 | 184 | 3 | 32 | 310 | 9 | 294 | 1.08e-45 | 162 |
| Msa0272970 | MtrunA17_Chr7g0233911 | 39.823 | 113 | 62 | 2 | 31 | 138 | 32 | 143 | 1.34e-18 | 84.7 |
| Msa0272970 | MtrunA17_Chr2g0308841 | 30.172 | 116 | 81 | 0 | 362 | 477 | 1 | 116 | 6.13e-17 | 80.9 |
| Msa0272970 | MtrunA17_Chr1g0149131 | 30.000 | 110 | 77 | 0 | 307 | 416 | 1 | 110 | 7.78e-16 | 73.9 |
| Msa0272970 | MtrunA17_Chr6g0451441 | 28.249 | 177 | 126 | 1 | 32 | 208 | 86 | 261 | 1.05e-14 | 76.3 |
| Msa0272970 | MtrunA17_Chr3g0078041 | 33.600 | 125 | 73 | 3 | 17 | 131 | 29 | 153 | 1.50e-14 | 73.2 |
| Msa0272970 | MtrunA17_Chr2g0329361 | 31.538 | 130 | 80 | 3 | 8 | 131 | 39 | 165 | 8.21e-14 | 71.2 |
| Msa0272970 | MtrunA17_Chr4g0033611 | 34.483 | 116 | 71 | 2 | 22 | 133 | 65 | 179 | 7.57e-13 | 68.6 |
| Msa0272970 | MtrunA17_Chr2g0329421 | 31.298 | 131 | 78 | 3 | 31 | 150 | 25 | 154 | 1.50e-12 | 67.0 |
| Msa0272970 | MtrunA17_Chr8g0340801 | 30.556 | 108 | 73 | 1 | 138 | 245 | 2 | 107 | 2.70e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0272970 | AT4G15090.1 | 47.799 | 477 | 240 | 3 | 20 | 491 | 42 | 514 | 2.64e-168 | 496 |
| Msa0272970 | AT4G15090.5 | 47.799 | 477 | 240 | 3 | 20 | 491 | 42 | 514 | 2.64e-168 | 496 |
| Msa0272970 | AT4G15090.3 | 47.799 | 477 | 240 | 3 | 20 | 491 | 42 | 514 | 2.64e-168 | 496 |
| Msa0272970 | AT4G15090.2 | 47.799 | 477 | 240 | 3 | 20 | 491 | 42 | 514 | 2.64e-168 | 496 |
| Msa0272970 | AT4G15090.4 | 47.799 | 477 | 240 | 3 | 20 | 491 | 42 | 514 | 2.64e-168 | 496 |
| Msa0272970 | AT3G22170.2 | 46.429 | 476 | 216 | 3 | 32 | 490 | 69 | 522 | 2.61e-157 | 468 |
| Msa0272970 | AT3G22170.1 | 46.429 | 476 | 216 | 3 | 32 | 490 | 69 | 522 | 2.61e-157 | 468 |
| Msa0272970 | AT1G76320.3 | 48.140 | 457 | 231 | 2 | 37 | 492 | 1 | 452 | 5.00e-154 | 454 |
| Msa0272970 | AT1G76320.1 | 48.140 | 457 | 231 | 2 | 37 | 492 | 1 | 452 | 2.01e-153 | 455 |
| Msa0272970 | AT1G76320.4 | 48.140 | 457 | 231 | 2 | 37 | 492 | 1 | 452 | 2.01e-153 | 455 |
| Msa0272970 | AT1G76320.2 | 48.140 | 457 | 231 | 2 | 37 | 492 | 1 | 452 | 2.49e-153 | 454 |
| Msa0272970 | AT4G38180.1 | 43.683 | 467 | 254 | 3 | 32 | 490 | 72 | 537 | 3.33e-140 | 422 |
| Msa0272970 | AT4G19990.3 | 41.408 | 483 | 230 | 5 | 28 | 492 | 16 | 463 | 1.39e-115 | 358 |
| Msa0272970 | AT4G19990.4 | 41.408 | 483 | 230 | 5 | 28 | 492 | 16 | 463 | 1.39e-115 | 358 |
| Msa0272970 | AT4G19990.5 | 41.408 | 483 | 230 | 5 | 28 | 492 | 16 | 463 | 2.39e-115 | 357 |
| Msa0272970 | AT4G19990.7 | 41.408 | 483 | 230 | 5 | 28 | 492 | 30 | 477 | 2.77e-115 | 357 |
| Msa0272970 | AT4G19990.6 | 41.408 | 483 | 230 | 5 | 28 | 492 | 16 | 463 | 4.45e-115 | 357 |
| Msa0272970 | AT4G19990.2 | 41.408 | 483 | 230 | 5 | 28 | 492 | 16 | 463 | 4.45e-115 | 357 |
| Msa0272970 | AT4G19990.1 | 40.363 | 441 | 210 | 5 | 70 | 492 | 1 | 406 | 1.76e-100 | 317 |
| Msa0272970 | AT1G52520.1 | 36.461 | 469 | 286 | 7 | 26 | 492 | 78 | 536 | 5.37e-97 | 308 |
| Msa0272970 | AT1G80010.1 | 36.403 | 467 | 286 | 5 | 33 | 490 | 95 | 559 | 2.87e-95 | 304 |
| Msa0272970 | AT2G27110.2 | 36.009 | 461 | 267 | 6 | 32 | 490 | 48 | 482 | 1.03e-94 | 305 |
| Msa0272970 | AT2G27110.1 | 36.009 | 461 | 267 | 6 | 32 | 490 | 48 | 482 | 1.03e-94 | 305 |
| Msa0272970 | AT3G06250.2 | 34.565 | 460 | 259 | 6 | 32 | 490 | 189 | 607 | 9.47e-89 | 288 |
| Msa0272970 | AT3G06250.1 | 34.565 | 460 | 259 | 6 | 32 | 490 | 189 | 607 | 9.47e-89 | 288 |
| Msa0272970 | AT3G06250.3 | 34.565 | 460 | 259 | 6 | 32 | 490 | 189 | 607 | 9.47e-89 | 288 |
| Msa0272970 | AT2G32250.5 | 44.366 | 284 | 158 | 0 | 210 | 493 | 177 | 460 | 5.78e-87 | 283 |
| Msa0272970 | AT2G32250.5 | 58.163 | 98 | 40 | 1 | 36 | 132 | 41 | 138 | 5.24e-29 | 121 |
| Msa0272970 | AT2G32250.8 | 44.366 | 284 | 158 | 0 | 210 | 493 | 136 | 419 | 7.57e-87 | 283 |
| Msa0272970 | AT2G32250.8 | 57.732 | 97 | 40 | 1 | 37 | 132 | 1 | 97 | 3.80e-28 | 119 |
| Msa0272970 | AT2G32250.7 | 44.366 | 284 | 158 | 0 | 210 | 493 | 136 | 419 | 7.80e-87 | 283 |
| Msa0272970 | AT2G32250.7 | 57.732 | 97 | 40 | 1 | 37 | 132 | 1 | 97 | 3.92e-28 | 119 |
| Msa0272970 | AT2G32250.2 | 44.366 | 284 | 158 | 0 | 210 | 493 | 177 | 460 | 1.47e-86 | 283 |
| Msa0272970 | AT2G32250.2 | 58.163 | 98 | 40 | 1 | 36 | 132 | 41 | 138 | 5.91e-29 | 121 |
| Msa0272970 | AT2G32250.4 | 44.366 | 284 | 158 | 0 | 210 | 493 | 177 | 460 | 1.47e-86 | 283 |
| Msa0272970 | AT2G32250.4 | 58.163 | 98 | 40 | 1 | 36 | 132 | 41 | 138 | 5.91e-29 | 121 |
| Msa0272970 | AT2G32250.6 | 44.366 | 284 | 158 | 0 | 210 | 493 | 177 | 460 | 1.47e-86 | 283 |
| Msa0272970 | AT2G32250.6 | 58.163 | 98 | 40 | 1 | 36 | 132 | 41 | 138 | 5.98e-29 | 121 |
| Msa0272970 | AT2G32250.1 | 44.366 | 284 | 158 | 0 | 210 | 493 | 177 | 460 | 1.47e-86 | 283 |
| Msa0272970 | AT2G32250.1 | 58.163 | 98 | 40 | 1 | 36 | 132 | 41 | 138 | 5.98e-29 | 121 |
| Msa0272970 | AT2G32250.3 | 44.366 | 284 | 158 | 0 | 210 | 493 | 177 | 460 | 1.47e-86 | 283 |
| Msa0272970 | AT2G32250.3 | 58.163 | 98 | 40 | 1 | 36 | 132 | 41 | 138 | 5.98e-29 | 121 |
| Msa0272970 | AT5G18960.2 | 35.065 | 462 | 257 | 7 | 32 | 490 | 210 | 631 | 1.53e-85 | 280 |
| Msa0272970 | AT5G18960.1 | 35.065 | 462 | 257 | 7 | 32 | 490 | 210 | 631 | 1.53e-85 | 280 |
| Msa0272970 | AT2G27110.3 | 44.637 | 289 | 158 | 1 | 202 | 490 | 51 | 337 | 1.08e-83 | 273 |
| Msa0272970 | AT4G38170.1 | 39.858 | 281 | 164 | 3 | 214 | 493 | 29 | 305 | 8.32e-72 | 238 |
| Msa0272970 | AT1G10240.2 | 28.542 | 480 | 325 | 9 | 25 | 490 | 40 | 515 | 3.66e-67 | 229 |
| Msa0272970 | AT1G10240.1 | 28.542 | 480 | 325 | 9 | 25 | 490 | 40 | 515 | 3.66e-67 | 229 |
| Msa0272970 | AT5G28530.1 | 26.987 | 478 | 325 | 10 | 33 | 490 | 55 | 528 | 4.02e-58 | 204 |
| Msa0272970 | AT5G28530.3 | 26.569 | 478 | 323 | 10 | 33 | 490 | 55 | 524 | 7.20e-58 | 203 |
| Msa0272970 | AT5G28530.2 | 26.569 | 478 | 323 | 10 | 33 | 490 | 55 | 524 | 7.20e-58 | 203 |
| Msa0272970 | AT5G28530.4 | 29.032 | 217 | 150 | 3 | 275 | 490 | 252 | 465 | 3.66e-25 | 109 |
| Msa0272970 | AT5G28530.5 | 28.111 | 217 | 148 | 3 | 275 | 490 | 252 | 461 | 6.13e-25 | 108 |
| Msa0272970 | AT3G59470.2 | 32.624 | 141 | 83 | 3 | 22 | 151 | 71 | 210 | 2.86e-15 | 76.3 |
| Msa0272970 | AT3G59470.3 | 32.624 | 141 | 83 | 3 | 22 | 151 | 59 | 198 | 3.07e-15 | 75.9 |
| Msa0272970 | AT3G59470.1 | 32.624 | 141 | 83 | 3 | 22 | 151 | 59 | 198 | 3.07e-15 | 75.9 |
| Msa0272970 | AT3G07500.1 | 38.095 | 105 | 61 | 1 | 32 | 132 | 32 | 136 | 4.28e-15 | 74.7 |
| Msa0272970 | AT4G12850.4 | 34.653 | 101 | 65 | 1 | 31 | 130 | 9 | 109 | 3.02e-13 | 67.4 |
| Msa0272970 | AT4G12850.2 | 34.653 | 101 | 65 | 1 | 31 | 130 | 9 | 109 | 4.11e-13 | 67.0 |
| Msa0272970 | AT2G43280.1 | 32.692 | 104 | 65 | 1 | 32 | 130 | 21 | 124 | 5.02e-13 | 68.6 |
| Msa0272970 | AT4G12850.1 | 33.945 | 109 | 70 | 2 | 31 | 137 | 9 | 117 | 1.46e-12 | 66.6 |
Find 69 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACAACAGTTTCATGATAAA+TGG | 0.147141 | 2_3:+4572741 | Msa0272970:CDS |
| GTTTACATATTTGTCGAAAA+AGG | 0.236148 | 2_3:-4572909 | None:intergenic |
| GAGCTTGATTGATTCTTCTA+TGG | 0.262788 | 2_3:-4572037 | None:intergenic |
| ATAGATGATTACAAAGAGTT+TGG | 0.303856 | 2_3:+4572344 | Msa0272970:CDS |
| TGGTCAGTTATTATTGCATT+TGG | 0.318296 | 2_3:-4572551 | None:intergenic |
| ATCATATGTTGCTGATTTAG+AGG | 0.333126 | 2_3:+4571674 | Msa0272970:CDS |
| TTCCAATGTAAGGTTCTTCA+TGG | 0.353929 | 2_3:-4571704 | None:intergenic |
| ATGCCATTTGCTCCCTTCAT+TGG | 0.359199 | 2_3:+4572413 | Msa0272970:CDS |
| AAGTGAAAATGATGATTTCA+TGG | 0.362255 | 2_3:+4572682 | Msa0272970:CDS |
| AATGTATCTTTCATGTAAAC+AGG | 0.380087 | 2_3:-4572842 | None:intergenic |
| CTACTTTCATTGCTCTGTCT+TGG | 0.380099 | 2_3:-4572571 | None:intergenic |
| GGTTGATGAAAACTTGGCTT+AGG | 0.391486 | 2_3:+4572510 | Msa0272970:CDS |
| GGAAAATAATGCGCATATGC+TGG | 0.400484 | 2_3:-4572011 | None:intergenic |
| TCAAATTCCATTCCAATGTA+AGG | 0.402468 | 2_3:-4571714 | None:intergenic |
| CACTTTCAATCAAGATTGCT+TGG | 0.404028 | 2_3:+4572446 | Msa0272970:CDS |
| TTCACTATTGACAGGCTCAT+TGG | 0.409194 | 2_3:-4571652 | None:intergenic |
| CGTCGTCTGACTTTGGAATC+AGG | 0.416108 | 2_3:+4572197 | Msa0272970:CDS |
| TCACATGGTTGATGAAAACT+TGG | 0.417352 | 2_3:+4572504 | Msa0272970:CDS |
| TCATGATAAATGGGAAGAAA+TGG | 0.421780 | 2_3:+4572751 | Msa0272970:CDS |
| ATGAAACTGTTGTATTGAAC+GGG | 0.423384 | 2_3:-4572732 | None:intergenic |
| TCAGTTATTATTGCATTTGG+AGG | 0.442714 | 2_3:-4572548 | None:intergenic |
| AAACAAGAAAACTACTTTGA+AGG | 0.443130 | 2_3:+4572928 | Msa0272970:CDS |
| TATGCTAAATGTGTCGGATT+TGG | 0.446775 | 2_3:+4571771 | Msa0272970:CDS |
| ACAACAGTTTCATGATAAAT+GGG | 0.448502 | 2_3:+4572742 | Msa0272970:CDS |
| CATGAAACTGTTGTATTGAA+CGG | 0.453502 | 2_3:-4572733 | None:intergenic |
| GGTGATGGAGTCTTAAGAAC+AGG | 0.463539 | 2_3:-4573034 | None:intergenic |
| TAAGGATCGTCGTCTGACTT+TGG | 0.465904 | 2_3:+4572190 | Msa0272970:CDS |
| AGAGCAATGAAAGTAGCTAT+TGG | 0.471938 | 2_3:+4572578 | Msa0272970:CDS |
| CCTTGTTTGAAGGTGGAATG+TGG | 0.477763 | 2_3:+4571906 | Msa0272970:CDS |
| ACACCAATGAAGGGAGCAAA+TGG | 0.478130 | 2_3:-4572416 | None:intergenic |
| GTGATTATTCACACCAATGA+AGG | 0.478774 | 2_3:-4572426 | None:intergenic |
| AAAACTTGGCTTAGGGCAAT+GGG | 0.494779 | 2_3:+4572518 | Msa0272970:CDS |
| GTTGATGAAAACTTGGCTTA+GGG | 0.499855 | 2_3:+4572511 | Msa0272970:CDS |
| AGGAGATGCAAATGCAATGT+TGG | 0.518710 | 2_3:+4572217 | Msa0272970:CDS |
| GAAAACTTGGCTTAGGGCAA+TGG | 0.523349 | 2_3:+4572517 | Msa0272970:CDS |
| AAATCCACGTCCTTGTTTGA+AGG | 0.523815 | 2_3:+4571896 | Msa0272970:CDS |
| AAAGAAATTGTGGTGACAGA+TGG | 0.532599 | 2_3:+4571946 | Msa0272970:CDS |
| TGATTGATTCTTCTATGGCA+AGG | 0.542980 | 2_3:-4572032 | None:intergenic |
| TCCGTGTTGTTTCGCAAGTG+TGG | 0.543472 | 2_3:-4572117 | None:intergenic |
| AGTGAAAATGATGATTTCAT+GGG | 0.548055 | 2_3:+4572683 | Msa0272970:CDS |
| CTTGTTTGAAGGTGGAATGT+GGG | 0.548706 | 2_3:+4571907 | Msa0272970:CDS |
| AAAATATAAAGTTGCTCTGG+AGG | 0.549502 | 2_3:+4572961 | Msa0272970:CDS |
| TGAAGAACCTTACATTGGAA+TGG | 0.550850 | 2_3:+4571707 | Msa0272970:CDS |
| GTATGAGAAAGTTGGTTGCT+CGG | 0.554268 | 2_3:+4572142 | Msa0272970:CDS |
| TCCACGTCCTTGTTTGAAGG+TGG | 0.557108 | 2_3:+4571899 | Msa0272970:CDS |
| GCTCGATATGCTAAATGTGT+CGG | 0.559196 | 2_3:+4571765 | Msa0272970:CDS |
| CCACATTCCACCTTCAAACA+AGG | 0.563253 | 2_3:-4571906 | None:intergenic |
| TTACATATCAAAAGAAATTG+TGG | 0.567315 | 2_3:+4571936 | Msa0272970:CDS |
| GCGATGGATTTGGATGATGA+TGG | 0.568217 | 2_3:+4572284 | Msa0272970:CDS |
| AATGAAAGTAGCTATTGGAC+AGG | 0.569312 | 2_3:+4572583 | Msa0272970:CDS |
| TGTATGAAGAACGTGAACAT+TGG | 0.569682 | 2_3:+4572816 | Msa0272970:CDS |
| AAGAAATTGTGGTGACAGAT+GGG | 0.571431 | 2_3:+4571947 | Msa0272970:CDS |
| AACCATGAAGAACCTTACAT+TGG | 0.573124 | 2_3:+4571702 | Msa0272970:CDS |
| ACATATGATTCACTATTGAC+AGG | 0.579587 | 2_3:-4571660 | None:intergenic |
| TCCACCTTCAAACAAGGACG+TGG | 0.585275 | 2_3:-4571900 | None:intergenic |
| TGTGATCTTTGATGAAGTCA+TGG | 0.586685 | 2_3:-4571974 | None:intergenic |
| CACGGAGGGTATGAGAAAGT+TGG | 0.587975 | 2_3:+4572134 | Msa0272970:CDS |
| TTGTTTGAAGGTGGAATGTG+GGG | 0.588472 | 2_3:+4571908 | Msa0272970:CDS |
| GCCACACTTGCGAAACAACA+CGG | 0.593571 | 2_3:+4572116 | Msa0272970:CDS |
| TTCAGCTGTCTGATGATGAG+TGG | 0.615117 | 2_3:+4572783 | Msa0272970:CDS |
| TGATTATTCACACCAATGAA+GGG | 0.622008 | 2_3:-4572425 | None:intergenic |
| ATTGAAACTTTGCAACATGT+TGG | 0.622361 | 2_3:+4572071 | Msa0272970:CDS |
| AAATATGCTTGCACGAGACA+TGG | 0.643012 | 2_3:+4571849 | Msa0272970:CDS |
| CACTTGCGAAACAACACGGA+GGG | 0.644648 | 2_3:+4572120 | Msa0272970:CDS |
| ATTACTAGCAAATGAGACCT+CGG | 0.672344 | 2_3:+4572475 | Msa0272970:CDS |
| ACTTGGCTTAGGGCAATGGG+TGG | 0.687217 | 2_3:+4572521 | Msa0272970:CDS |
| AGACCTCGGAGACTTTCACA+TGG | 0.731266 | 2_3:+4572489 | Msa0272970:CDS |
| CAACCATGTGAAAGTCTCCG+AGG | 0.735828 | 2_3:-4572492 | None:intergenic |
| ACACTTGCGAAACAACACGG+AGG | 0.797516 | 2_3:+4572119 | Msa0272970:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAGAAATCTTTTAGATA+AGG | + | chr2_3:4572172-4572191 | Msa0272970:CDS | 15.0% |
| !!! | TATTAGAAATCTTTTAGATA+AGG | + | chr2_3:4572172-4572191 | Msa0272970:CDS | 15.0% |
| !!! | ACAATTTCTTTTGATATGTA+AGG | - | chr2_3:4571937-4571956 | None:intergenic | 20.0% |
| !! | TTACATATCAAAAGAAATTG+TGG | + | chr2_3:4571936-4571955 | Msa0272970:CDS | 20.0% |
| !!! | TACATGAAAGATACATTTTT+TGG | + | chr2_3:4572848-4572867 | Msa0272970:CDS | 20.0% |
| !!! | ACAATTTCTTTTGATATGTA+AGG | - | chr2_3:4571937-4571956 | None:intergenic | 20.0% |
| !! | TTACATATCAAAAGAAATTG+TGG | + | chr2_3:4571936-4571955 | Msa0272970:CDS | 20.0% |
| !!! | TACATGAAAGATACATTTTT+TGG | + | chr2_3:4572848-4572867 | Msa0272970:CDS | 20.0% |
| !! | TCGTCTGAAAAATGTATTTT+GGG | + | chr2_3:4572307-4572326 | Msa0272970:CDS | 25.0% |
| ! | ATAGATGATTACAAAGAGTT+TGG | + | chr2_3:4572344-4572363 | Msa0272970:CDS | 25.0% |
| ! | AAGTGAAAATGATGATTTCA+TGG | + | chr2_3:4572682-4572701 | Msa0272970:CDS | 25.0% |
| ! | AGTGAAAATGATGATTTCAT+GGG | + | chr2_3:4572683-4572702 | Msa0272970:CDS | 25.0% |
| ! | TACAACAGTTTCATGATAAA+TGG | + | chr2_3:4572741-4572760 | Msa0272970:CDS | 25.0% |
| ! | ACAACAGTTTCATGATAAAT+GGG | + | chr2_3:4572742-4572761 | Msa0272970:CDS | 25.0% |
| ! | AATGTATCTTTCATGTAAAC+AGG | - | chr2_3:4572845-4572864 | None:intergenic | 25.0% |
| !!! | ATGAAAGATACATTTTTTGG+TGG | + | chr2_3:4572851-4572870 | Msa0272970:CDS | 25.0% |
| ! | GTTTACATATTTGTCGAAAA+AGG | - | chr2_3:4572912-4572931 | None:intergenic | 25.0% |
| ! | AAACAAGAAAACTACTTTGA+AGG | + | chr2_3:4572928-4572947 | Msa0272970:CDS | 25.0% |
| ! | TGAAAAATATAAAGTTGCTC+TGG | + | chr2_3:4572958-4572977 | Msa0272970:CDS | 25.0% |
| !!! | ATTGACATTTGCTTTTCAAA+AGG | - | chr2_3:4573058-4573077 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAGCAAATGTCAA+TGG | + | chr2_3:4573057-4573076 | Msa0272970:CDS | 25.0% |
| !! | TCGTCTGAAAAATGTATTTT+GGG | + | chr2_3:4572307-4572326 | Msa0272970:CDS | 25.0% |
| ! | ATAGATGATTACAAAGAGTT+TGG | + | chr2_3:4572344-4572363 | Msa0272970:CDS | 25.0% |
| ! | AAGTGAAAATGATGATTTCA+TGG | + | chr2_3:4572682-4572701 | Msa0272970:CDS | 25.0% |
| ! | AGTGAAAATGATGATTTCAT+GGG | + | chr2_3:4572683-4572702 | Msa0272970:CDS | 25.0% |
| ! | TACAACAGTTTCATGATAAA+TGG | + | chr2_3:4572741-4572760 | Msa0272970:CDS | 25.0% |
| ! | ACAACAGTTTCATGATAAAT+GGG | + | chr2_3:4572742-4572761 | Msa0272970:CDS | 25.0% |
| ! | AATGTATCTTTCATGTAAAC+AGG | - | chr2_3:4572845-4572864 | None:intergenic | 25.0% |
| !!! | ATGAAAGATACATTTTTTGG+TGG | + | chr2_3:4572851-4572870 | Msa0272970:CDS | 25.0% |
| ! | GTTTACATATTTGTCGAAAA+AGG | - | chr2_3:4572912-4572931 | None:intergenic | 25.0% |
| ! | AAACAAGAAAACTACTTTGA+AGG | + | chr2_3:4572928-4572947 | Msa0272970:CDS | 25.0% |
| ! | TGAAAAATATAAAGTTGCTC+TGG | + | chr2_3:4572958-4572977 | Msa0272970:CDS | 25.0% |
| !!! | ATTGACATTTGCTTTTCAAA+AGG | - | chr2_3:4573058-4573077 | None:intergenic | 25.0% |
| !!! | TTTTGAAAAGCAAATGTCAA+TGG | + | chr2_3:4573057-4573076 | Msa0272970:CDS | 25.0% |
| ACATATGATTCACTATTGAC+AGG | - | chr2_3:4571663-4571682 | None:intergenic | 30.0% | |
| !! | ATCATATGTTGCTGATTTAG+AGG | + | chr2_3:4571674-4571693 | Msa0272970:CDS | 30.0% |
| TCAAATTCCATTCCAATGTA+AGG | - | chr2_3:4571717-4571736 | None:intergenic | 30.0% | |
| ! | GTTTAGAAATTTTCGAACGA+CGG | - | chr2_3:4571815-4571834 | None:intergenic | 30.0% |
| ATTGAAACTTTGCAACATGT+TGG | + | chr2_3:4572071-4572090 | Msa0272970:CDS | 30.0% | |
| ! | TTCAAGATTCTTTTATGCGA+TGG | + | chr2_3:4572268-4572287 | Msa0272970:CDS | 30.0% |
| !! | ATTCTTTTATGCGATGGATT+TGG | + | chr2_3:4572274-4572293 | Msa0272970:CDS | 30.0% |
| ! | GTCGTCTGAAAAATGTATTT+TGG | + | chr2_3:4572306-4572325 | Msa0272970:CDS | 30.0% |
| !! | TCTGAAAAATGTATTTTGGG+TGG | + | chr2_3:4572310-4572329 | Msa0272970:CDS | 30.0% |
| TGATTATTCACACCAATGAA+GGG | - | chr2_3:4572428-4572447 | None:intergenic | 30.0% | |
| TCAGTTATTATTGCATTTGG+AGG | - | chr2_3:4572551-4572570 | None:intergenic | 30.0% | |
| TGGTCAGTTATTATTGCATT+TGG | - | chr2_3:4572554-4572573 | None:intergenic | 30.0% | |
| ATGAAACTGTTGTATTGAAC+GGG | - | chr2_3:4572735-4572754 | None:intergenic | 30.0% | |
| CATGAAACTGTTGTATTGAA+CGG | - | chr2_3:4572736-4572755 | None:intergenic | 30.0% | |
| TCATGATAAATGGGAAGAAA+TGG | + | chr2_3:4572751-4572770 | Msa0272970:CDS | 30.0% | |
| AAAATATAAAGTTGCTCTGG+AGG | + | chr2_3:4572961-4572980 | Msa0272970:CDS | 30.0% | |
| !! | AGCAAGCTGATTTTAATACA+TGG | + | chr2_3:4573002-4573021 | Msa0272970:CDS | 30.0% |
| !! | ATTTGCTTTTCAAAAGGTGA+TGG | - | chr2_3:4573052-4573071 | None:intergenic | 30.0% |
| ACATATGATTCACTATTGAC+AGG | - | chr2_3:4571663-4571682 | None:intergenic | 30.0% | |
| !! | ATCATATGTTGCTGATTTAG+AGG | + | chr2_3:4571674-4571693 | Msa0272970:CDS | 30.0% |
| TCAAATTCCATTCCAATGTA+AGG | - | chr2_3:4571717-4571736 | None:intergenic | 30.0% | |
| ! | GTTTAGAAATTTTCGAACGA+CGG | - | chr2_3:4571815-4571834 | None:intergenic | 30.0% |
| ATTGAAACTTTGCAACATGT+TGG | + | chr2_3:4572071-4572090 | Msa0272970:CDS | 30.0% | |
| ! | TTCAAGATTCTTTTATGCGA+TGG | + | chr2_3:4572268-4572287 | Msa0272970:CDS | 30.0% |
| !! | ATTCTTTTATGCGATGGATT+TGG | + | chr2_3:4572274-4572293 | Msa0272970:CDS | 30.0% |
| ! | GTCGTCTGAAAAATGTATTT+TGG | + | chr2_3:4572306-4572325 | Msa0272970:CDS | 30.0% |
| !! | TCTGAAAAATGTATTTTGGG+TGG | + | chr2_3:4572310-4572329 | Msa0272970:CDS | 30.0% |
| TGATTATTCACACCAATGAA+GGG | - | chr2_3:4572428-4572447 | None:intergenic | 30.0% | |
| TCAGTTATTATTGCATTTGG+AGG | - | chr2_3:4572551-4572570 | None:intergenic | 30.0% | |
| TGGTCAGTTATTATTGCATT+TGG | - | chr2_3:4572554-4572573 | None:intergenic | 30.0% | |
| ATGAAACTGTTGTATTGAAC+GGG | - | chr2_3:4572735-4572754 | None:intergenic | 30.0% | |
| CATGAAACTGTTGTATTGAA+CGG | - | chr2_3:4572736-4572755 | None:intergenic | 30.0% | |
| TCATGATAAATGGGAAGAAA+TGG | + | chr2_3:4572751-4572770 | Msa0272970:CDS | 30.0% | |
| AAAATATAAAGTTGCTCTGG+AGG | + | chr2_3:4572961-4572980 | Msa0272970:CDS | 30.0% | |
| !! | AGCAAGCTGATTTTAATACA+TGG | + | chr2_3:4573002-4573021 | Msa0272970:CDS | 30.0% |
| !! | ATTTGCTTTTCAAAAGGTGA+TGG | - | chr2_3:4573052-4573071 | None:intergenic | 30.0% |
| ! | CACTCTTCATTTTCATCGAT+AGG | - | chr2_3:4571627-4571646 | None:intergenic | 35.0% |
| AACCATGAAGAACCTTACAT+TGG | + | chr2_3:4571702-4571721 | Msa0272970:CDS | 35.0% | |
| TTCCAATGTAAGGTTCTTCA+TGG | - | chr2_3:4571707-4571726 | None:intergenic | 35.0% | |
| TGAAGAACCTTACATTGGAA+TGG | + | chr2_3:4571707-4571726 | Msa0272970:CDS | 35.0% | |
| TATGCTAAATGTGTCGGATT+TGG | + | chr2_3:4571771-4571790 | Msa0272970:CDS | 35.0% | |
| TGGTAAAAAACGAGAATCGA+CGG | + | chr2_3:4571869-4571888 | Msa0272970:CDS | 35.0% | |
| AAAGAAATTGTGGTGACAGA+TGG | + | chr2_3:4571946-4571965 | Msa0272970:CDS | 35.0% | |
| AAGAAATTGTGGTGACAGAT+GGG | + | chr2_3:4571947-4571966 | Msa0272970:CDS | 35.0% | |
| TGTGATCTTTGATGAAGTCA+TGG | - | chr2_3:4571977-4571996 | None:intergenic | 35.0% | |
| ! | TGATTGATTCTTCTATGGCA+AGG | - | chr2_3:4572035-4572054 | None:intergenic | 35.0% |
| ! | GAGCTTGATTGATTCTTCTA+TGG | - | chr2_3:4572040-4572059 | None:intergenic | 35.0% |
| ! | AGTGTGGCAAAAATTTTGCT+TGG | - | chr2_3:4572104-4572123 | None:intergenic | 35.0% |
| GTGATTATTCACACCAATGA+AGG | - | chr2_3:4572429-4572448 | None:intergenic | 35.0% | |
| CACTTTCAATCAAGATTGCT+TGG | + | chr2_3:4572446-4572465 | Msa0272970:CDS | 35.0% | |
| ATTACTAGCAAATGAGACCT+CGG | + | chr2_3:4572475-4572494 | Msa0272970:CDS | 35.0% | |
| !! | TCACATGGTTGATGAAAACT+TGG | + | chr2_3:4572504-4572523 | Msa0272970:CDS | 35.0% |
| ! | GTTGATGAAAACTTGGCTTA+GGG | + | chr2_3:4572511-4572530 | Msa0272970:CDS | 35.0% |
| AGAGCAATGAAAGTAGCTAT+TGG | + | chr2_3:4572578-4572597 | Msa0272970:CDS | 35.0% | |
| AATGAAAGTAGCTATTGGAC+AGG | + | chr2_3:4572583-4572602 | Msa0272970:CDS | 35.0% | |
| !! | AGAAAAGTGCCTGAAAAACT+CGG | + | chr2_3:4572650-4572669 | Msa0272970:CDS | 35.0% |
| ! | ATAACATGACCGAGTTTTTC+AGG | - | chr2_3:4572662-4572681 | None:intergenic | 35.0% |
| TGTATGAAGAACGTGAACAT+TGG | + | chr2_3:4572816-4572835 | Msa0272970:CDS | 35.0% | |
| ! | CACTCTTCATTTTCATCGAT+AGG | - | chr2_3:4571627-4571646 | None:intergenic | 35.0% |
| AACCATGAAGAACCTTACAT+TGG | + | chr2_3:4571702-4571721 | Msa0272970:CDS | 35.0% | |
| TTCCAATGTAAGGTTCTTCA+TGG | - | chr2_3:4571707-4571726 | None:intergenic | 35.0% | |
| TGAAGAACCTTACATTGGAA+TGG | + | chr2_3:4571707-4571726 | Msa0272970:CDS | 35.0% | |
| TATGCTAAATGTGTCGGATT+TGG | + | chr2_3:4571771-4571790 | Msa0272970:CDS | 35.0% | |
| TGGTAAAAAACGAGAATCGA+CGG | + | chr2_3:4571869-4571888 | Msa0272970:CDS | 35.0% | |
| AAAGAAATTGTGGTGACAGA+TGG | + | chr2_3:4571946-4571965 | Msa0272970:CDS | 35.0% | |
| AAGAAATTGTGGTGACAGAT+GGG | + | chr2_3:4571947-4571966 | Msa0272970:CDS | 35.0% | |
| TGTGATCTTTGATGAAGTCA+TGG | - | chr2_3:4571977-4571996 | None:intergenic | 35.0% | |
| ! | TGATTGATTCTTCTATGGCA+AGG | - | chr2_3:4572035-4572054 | None:intergenic | 35.0% |
| ! | GAGCTTGATTGATTCTTCTA+TGG | - | chr2_3:4572040-4572059 | None:intergenic | 35.0% |
| ! | AGTGTGGCAAAAATTTTGCT+TGG | - | chr2_3:4572104-4572123 | None:intergenic | 35.0% |
| GTGATTATTCACACCAATGA+AGG | - | chr2_3:4572429-4572448 | None:intergenic | 35.0% | |
| CACTTTCAATCAAGATTGCT+TGG | + | chr2_3:4572446-4572465 | Msa0272970:CDS | 35.0% | |
| ATTACTAGCAAATGAGACCT+CGG | + | chr2_3:4572475-4572494 | Msa0272970:CDS | 35.0% | |
| !! | TCACATGGTTGATGAAAACT+TGG | + | chr2_3:4572504-4572523 | Msa0272970:CDS | 35.0% |
| ! | GTTGATGAAAACTTGGCTTA+GGG | + | chr2_3:4572511-4572530 | Msa0272970:CDS | 35.0% |
| AGAGCAATGAAAGTAGCTAT+TGG | + | chr2_3:4572578-4572597 | Msa0272970:CDS | 35.0% | |
| AATGAAAGTAGCTATTGGAC+AGG | + | chr2_3:4572583-4572602 | Msa0272970:CDS | 35.0% | |
| !! | AGAAAAGTGCCTGAAAAACT+CGG | + | chr2_3:4572650-4572669 | Msa0272970:CDS | 35.0% |
| ! | ATAACATGACCGAGTTTTTC+AGG | - | chr2_3:4572662-4572681 | None:intergenic | 35.0% |
| TGTATGAAGAACGTGAACAT+TGG | + | chr2_3:4572816-4572835 | Msa0272970:CDS | 35.0% | |
| TTCACTATTGACAGGCTCAT+TGG | - | chr2_3:4571655-4571674 | None:intergenic | 40.0% | |
| GCTCGATATGCTAAATGTGT+CGG | + | chr2_3:4571765-4571784 | Msa0272970:CDS | 40.0% | |
| AAATATGCTTGCACGAGACA+TGG | + | chr2_3:4571849-4571868 | Msa0272970:CDS | 40.0% | |
| ! | AAATCCACGTCCTTGTTTGA+AGG | + | chr2_3:4571896-4571915 | Msa0272970:CDS | 40.0% |
| CTTGTTTGAAGGTGGAATGT+GGG | + | chr2_3:4571907-4571926 | Msa0272970:CDS | 40.0% | |
| TTGTTTGAAGGTGGAATGTG+GGG | + | chr2_3:4571908-4571927 | Msa0272970:CDS | 40.0% | |
| GGAAAATAATGCGCATATGC+TGG | - | chr2_3:4572014-4572033 | None:intergenic | 40.0% | |
| ! | GTATGAGAAAGTTGGTTGCT+CGG | + | chr2_3:4572142-4572161 | Msa0272970:CDS | 40.0% |
| AGGAGATGCAAATGCAATGT+TGG | + | chr2_3:4572217-4572236 | Msa0272970:CDS | 40.0% | |
| !! | GTATTTTGGGTGGATGCAAA+TGG | + | chr2_3:4572320-4572339 | Msa0272970:CDS | 40.0% |
| !! | GGTTGATGAAAACTTGGCTT+AGG | + | chr2_3:4572510-4572529 | Msa0272970:CDS | 40.0% |
| AAAACTTGGCTTAGGGCAAT+GGG | + | chr2_3:4572518-4572537 | Msa0272970:CDS | 40.0% | |
| CTACTTTCATTGCTCTGTCT+TGG | - | chr2_3:4572574-4572593 | None:intergenic | 40.0% | |
| CAAAAACGATGTCGAGCATT+TGG | - | chr2_3:4572614-4572633 | None:intergenic | 40.0% | |
| !! | CTCGACATCGTTTTTGTCTT+TGG | + | chr2_3:4572618-4572637 | Msa0272970:CDS | 40.0% |
| TTCACTATTGACAGGCTCAT+TGG | - | chr2_3:4571655-4571674 | None:intergenic | 40.0% | |
| GCTCGATATGCTAAATGTGT+CGG | + | chr2_3:4571765-4571784 | Msa0272970:CDS | 40.0% | |
| AAATATGCTTGCACGAGACA+TGG | + | chr2_3:4571849-4571868 | Msa0272970:CDS | 40.0% | |
| ! | AAATCCACGTCCTTGTTTGA+AGG | + | chr2_3:4571896-4571915 | Msa0272970:CDS | 40.0% |
| CTTGTTTGAAGGTGGAATGT+GGG | + | chr2_3:4571907-4571926 | Msa0272970:CDS | 40.0% | |
| TTGTTTGAAGGTGGAATGTG+GGG | + | chr2_3:4571908-4571927 | Msa0272970:CDS | 40.0% | |
| GGAAAATAATGCGCATATGC+TGG | - | chr2_3:4572014-4572033 | None:intergenic | 40.0% | |
| ! | GTATGAGAAAGTTGGTTGCT+CGG | + | chr2_3:4572142-4572161 | Msa0272970:CDS | 40.0% |
| AGGAGATGCAAATGCAATGT+TGG | + | chr2_3:4572217-4572236 | Msa0272970:CDS | 40.0% | |
| !! | GTATTTTGGGTGGATGCAAA+TGG | + | chr2_3:4572320-4572339 | Msa0272970:CDS | 40.0% |
| !! | GGTTGATGAAAACTTGGCTT+AGG | + | chr2_3:4572510-4572529 | Msa0272970:CDS | 40.0% |
| AAAACTTGGCTTAGGGCAAT+GGG | + | chr2_3:4572518-4572537 | Msa0272970:CDS | 40.0% | |
| CTACTTTCATTGCTCTGTCT+TGG | - | chr2_3:4572574-4572593 | None:intergenic | 40.0% | |
| CAAAAACGATGTCGAGCATT+TGG | - | chr2_3:4572614-4572633 | None:intergenic | 40.0% | |
| !! | CTCGACATCGTTTTTGTCTT+TGG | + | chr2_3:4572618-4572637 | Msa0272970:CDS | 40.0% |
| CCACATTCCACCTTCAAACA+AGG | - | chr2_3:4571909-4571928 | None:intergenic | 45.0% | |
| ! | CCTTGTTTGAAGGTGGAATG+TGG | + | chr2_3:4571906-4571925 | Msa0272970:CDS | 45.0% |
| TAAGGATCGTCGTCTGACTT+TGG | + | chr2_3:4572190-4572209 | Msa0272970:CDS | 45.0% | |
| ! | GCGATGGATTTGGATGATGA+TGG | + | chr2_3:4572284-4572303 | Msa0272970:CDS | 45.0% |
| ! | ATGCCATTTGCTCCCTTCAT+TGG | + | chr2_3:4572413-4572432 | Msa0272970:CDS | 45.0% |
| ACACCAATGAAGGGAGCAAA+TGG | - | chr2_3:4572419-4572438 | None:intergenic | 45.0% | |
| GAAAACTTGGCTTAGGGCAA+TGG | + | chr2_3:4572517-4572536 | Msa0272970:CDS | 45.0% | |
| ! | TTCAGCTGTCTGATGATGAG+TGG | + | chr2_3:4572783-4572802 | Msa0272970:CDS | 45.0% |
| !! | GGTGATGGAGTCTTAAGAAC+AGG | - | chr2_3:4573037-4573056 | None:intergenic | 45.0% |
| CCACATTCCACCTTCAAACA+AGG | - | chr2_3:4571909-4571928 | None:intergenic | 45.0% | |
| ! | CCTTGTTTGAAGGTGGAATG+TGG | + | chr2_3:4571906-4571925 | Msa0272970:CDS | 45.0% |
| TAAGGATCGTCGTCTGACTT+TGG | + | chr2_3:4572190-4572209 | Msa0272970:CDS | 45.0% | |
| ! | GCGATGGATTTGGATGATGA+TGG | + | chr2_3:4572284-4572303 | Msa0272970:CDS | 45.0% |
| ! | ATGCCATTTGCTCCCTTCAT+TGG | + | chr2_3:4572413-4572432 | Msa0272970:CDS | 45.0% |
| ACACCAATGAAGGGAGCAAA+TGG | - | chr2_3:4572419-4572438 | None:intergenic | 45.0% | |
| GAAAACTTGGCTTAGGGCAA+TGG | + | chr2_3:4572517-4572536 | Msa0272970:CDS | 45.0% | |
| ! | TTCAGCTGTCTGATGATGAG+TGG | + | chr2_3:4572783-4572802 | Msa0272970:CDS | 45.0% |
| !! | GGTGATGGAGTCTTAAGAAC+AGG | - | chr2_3:4573037-4573056 | None:intergenic | 45.0% |
| ! | TCCACGTCCTTGTTTGAAGG+TGG | + | chr2_3:4571899-4571918 | Msa0272970:CDS | 50.0% |
| TCCACCTTCAAACAAGGACG+TGG | - | chr2_3:4571903-4571922 | None:intergenic | 50.0% | |
| GCCACACTTGCGAAACAACA+CGG | + | chr2_3:4572116-4572135 | Msa0272970:CDS | 50.0% | |
| !! | TCCGTGTTGTTTCGCAAGTG+TGG | - | chr2_3:4572120-4572139 | None:intergenic | 50.0% |
| ACACTTGCGAAACAACACGG+AGG | + | chr2_3:4572119-4572138 | Msa0272970:CDS | 50.0% | |
| CACTTGCGAAACAACACGGA+GGG | + | chr2_3:4572120-4572139 | Msa0272970:CDS | 50.0% | |
| ! | CACGGAGGGTATGAGAAAGT+TGG | + | chr2_3:4572134-4572153 | Msa0272970:CDS | 50.0% |
| !! | CGTCGTCTGACTTTGGAATC+AGG | + | chr2_3:4572197-4572216 | Msa0272970:CDS | 50.0% |
| AGACCTCGGAGACTTTCACA+TGG | + | chr2_3:4572489-4572508 | Msa0272970:CDS | 50.0% | |
| CAACCATGTGAAAGTCTCCG+AGG | - | chr2_3:4572495-4572514 | None:intergenic | 50.0% | |
| ! | TCCACGTCCTTGTTTGAAGG+TGG | + | chr2_3:4571899-4571918 | Msa0272970:CDS | 50.0% |
| TCCACCTTCAAACAAGGACG+TGG | - | chr2_3:4571903-4571922 | None:intergenic | 50.0% | |
| GCCACACTTGCGAAACAACA+CGG | + | chr2_3:4572116-4572135 | Msa0272970:CDS | 50.0% | |
| !! | TCCGTGTTGTTTCGCAAGTG+TGG | - | chr2_3:4572120-4572139 | None:intergenic | 50.0% |
| ACACTTGCGAAACAACACGG+AGG | + | chr2_3:4572119-4572138 | Msa0272970:CDS | 50.0% | |
| CACTTGCGAAACAACACGGA+GGG | + | chr2_3:4572120-4572139 | Msa0272970:CDS | 50.0% | |
| ! | CACGGAGGGTATGAGAAAGT+TGG | + | chr2_3:4572134-4572153 | Msa0272970:CDS | 50.0% |
| !! | CGTCGTCTGACTTTGGAATC+AGG | + | chr2_3:4572197-4572216 | Msa0272970:CDS | 50.0% |
| AGACCTCGGAGACTTTCACA+TGG | + | chr2_3:4572489-4572508 | Msa0272970:CDS | 50.0% | |
| CAACCATGTGAAAGTCTCCG+AGG | - | chr2_3:4572495-4572514 | None:intergenic | 50.0% | |
| ACTTGGCTTAGGGCAATGGG+TGG | + | chr2_3:4572521-4572540 | Msa0272970:CDS | 55.0% | |
| ACTTGGCTTAGGGCAATGGG+TGG | + | chr2_3:4572521-4572540 | Msa0272970:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 4571618 | 4573108 | 4571618 | ID=Msa0272970;Name=Msa0272970 |
| chr2_3 | mRNA | 4571618 | 4573108 | 4571618 | ID=Msa0272970-mRNA-1;Parent=Msa0272970;Name=Msa0272970-mRNA-1;_AED=0.36;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|496 |
| chr2_3 | exon | 4571618 | 4573108 | 4571618 | ID=Msa0272970-mRNA-1:exon:2243;Parent=Msa0272970-mRNA-1 |
| chr2_3 | CDS | 4571618 | 4573108 | 4571618 | ID=Msa0272970-mRNA-1:cds;Parent=Msa0272970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
