AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0280680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0280680 MtrunA17_Chr2g0294711 93.880 915 29 1 1 888 1 915 0.0 1789
Msa0280680 MtrunA17_Chr4g0068161 70.895 883 244 3 1 871 1 882 0.0 1278
Msa0280680 MtrunA17_Chr8g0382191 32.285 604 364 14 299 871 433 1022 1.24e-83 290
Msa0280680 MtrunA17_Chr8g0382191 48.555 173 76 2 25 186 9 179 5.05e-42 166
Msa0280680 MtrunA17_Chr8g0377501 36.106 565 301 17 339 882 395 920 1.02e-82 286
Msa0280680 MtrunA17_Chr8g0377501 48.344 151 76 1 24 172 13 163 4.24e-39 157
Msa0280680 MtrunA17_Chr2g0279141 32.161 597 358 13 301 867 395 974 5.64e-79 277
Msa0280680 MtrunA17_Chr2g0279141 54.861 144 63 2 25 168 13 154 5.90e-39 156
Msa0280680 MtrunA17_Chr4g0050401 31.448 601 363 14 302 871 384 966 6.21e-76 268
Msa0280680 MtrunA17_Chr4g0050401 46.857 175 81 3 25 198 13 176 3.30e-38 154
Msa0280680 MtrunA17_Chr3g0122351 33.829 538 304 14 340 858 375 879 2.98e-68 245
Msa0280680 MtrunA17_Chr3g0122351 54.135 133 59 1 26 156 8 140 4.01e-39 157
Msa0280680 MtrunA17_Chr8g0382181 45.556 90 49 0 67 156 8 97 1.74e-20 95.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0280680 AT3G16940.1 56.069 865 320 11 9 871 7 813 0.0 934
Msa0280680 AT3G16940.3 55.635 843 314 11 31 871 2 786 0.0 899
Msa0280680 AT3G16940.2 55.414 785 295 10 9 791 7 738 0.0 829
Msa0280680 AT5G09410.1 31.283 943 509 25 25 867 16 919 1.68e-124 400
Msa0280680 AT5G09410.3 30.063 958 519 24 25 867 75 996 1.88e-115 378
Msa0280680 AT2G22300.3 33.558 593 348 14 299 867 331 901 2.05e-83 288
Msa0280680 AT2G22300.3 66.265 83 28 0 71 153 1 83 1.76e-28 123
Msa0280680 AT2G22300.2 33.558 593 348 14 299 867 389 959 9.11e-83 288
Msa0280680 AT2G22300.2 58.571 140 58 0 14 153 2 141 2.80e-45 177
Msa0280680 AT2G22300.1 33.558 593 348 14 299 867 389 959 9.11e-83 288
Msa0280680 AT2G22300.1 58.571 140 58 0 14 153 2 141 2.80e-45 177
Msa0280680 AT5G64220.1 31.343 603 339 13 302 871 423 983 6.68e-79 277
Msa0280680 AT5G64220.1 51.648 182 74 3 25 193 13 193 8.46e-45 175
Msa0280680 AT5G64220.2 31.343 603 339 13 302 871 423 983 6.68e-79 277
Msa0280680 AT5G64220.2 51.648 182 74 3 25 193 13 193 8.46e-45 175
Msa0280680 AT5G09410.4 31.481 540 332 10 356 867 287 816 2.39e-74 262
Msa0280680 AT5G09410.2 31.481 540 332 10 356 867 408 937 1.96e-73 261
Msa0280680 AT5G09410.2 46.667 180 79 2 25 190 16 192 4.61e-41 164
Msa0280680 AT1G67310.1 35.361 526 294 13 357 858 444 947 1.34e-64 235
Msa0280680 AT1G67310.1 46.324 136 73 0 21 156 32 167 1.11e-34 143

Find 201 sgRNAs with CRISPR-Local

Find 412 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGATAAATTTACATGAATT+TGG 0.133181 2_3:+15530613 None:intergenic
CTGGATTTCCGCGACAAATT+TGG 0.162843 2_3:-15526017 Msa0280680:CDS
AGATGTTTGGTGGATGTTTC+TGG 0.192027 2_3:-15523884 Msa0280680:three_prime_UTR
GGACTCACATTTGAATTTAA+TGG 0.192577 2_3:+15527958 None:intergenic
CATGAAGTGTATAAAACTTT+TGG 0.232830 2_3:+15526256 None:intergenic
AAATTAACAACTTGGCTAAT+AGG 0.235743 2_3:+15526476 None:intergenic
CTATCAGAAGACTTGGATTC+TGG 0.246247 2_3:-15527907 Msa0280680:CDS
CAAACTCAGGGAATGGCTTT+TGG 0.255377 2_3:-15526162 Msa0280680:CDS
TAATGCACTCTGTTCTTCTT+TGG 0.262769 2_3:+15530691 None:intergenic
TTCTTGCAGGTCCTGGTAAC+TGG 0.267829 2_3:-15526665 Msa0280680:intron
AGTTGGATCTGTCACCAAAT+TGG 0.280566 2_3:+15525315 None:intergenic
GCCACAGACACACATTATAT+TGG 0.281294 2_3:+15526607 None:intergenic
TCTAATAATCACATCAAATA+AGG 0.281850 2_3:+15523828 None:intergenic
GTAAGGTTCTCAGCATTTAC+TGG 0.282291 2_3:+15525133 None:intergenic
CTGGATCAGTTGTAGTGGTT+TGG 0.306285 2_3:+15525152 None:intergenic
AATTTGTCTTAGGGAGAATA+TGG 0.308955 2_3:-15525368 Msa0280680:intron
GGCAATATCGTAAGATTCTA+TGG 0.311297 2_3:-15524694 Msa0280680:CDS
CAACTTGGCTAATAGGCTTA+TGG 0.317255 2_3:+15526483 None:intergenic
ATGAGCTTAATACACTTGAT+TGG 0.321779 2_3:-15527509 Msa0280680:CDS
ATTCTAACTCCGCCAGAGTC+TGG 0.324528 2_3:-15527124 Msa0280680:CDS
CTTCATTGGGCAGCATATAA+TGG 0.325901 2_3:-15525984 Msa0280680:CDS
TTTGGAAAGAAATAATGTTT+TGG 0.330089 2_3:+15526274 None:intergenic
AGGTTGGAGTTTACCGATGC+TGG 0.332809 2_3:-15526556 Msa0280680:CDS
ATTGCTTTAGTATCTTGAAA+TGG 0.335546 2_3:-15523935 Msa0280680:three_prime_UTR
GGTGCAGTTGTATCAGAAAT+AGG 0.337957 2_3:+15527937 None:intergenic
TCGATGCAGGCTGCATTTAG+AGG 0.340503 2_3:-15524731 Msa0280680:intron
AATACCCCTACTATACAAAA+TGG 0.347537 2_3:-15527462 Msa0280680:CDS
TCCACCACCAGTGATGAAAA+TGG 0.348372 2_3:+15526884 None:intergenic
ATCTGGCGTGCTTCCTCCTC+TGG 0.351586 2_3:+15524980 None:intergenic
CACGCATACAAGCAGCGTTT+AGG 0.356504 2_3:-15525048 Msa0280680:CDS
TCATGCTTAATTAAGATGTT+TGG 0.358384 2_3:-15523897 Msa0280680:three_prime_UTR
TTGGATGGACAGCTCTTCAT+TGG 0.360303 2_3:-15525998 Msa0280680:CDS
TTGCAAAGTCAGAATAGCTT+TGG 0.360951 2_3:-15526995 Msa0280680:CDS
TTACTGAGGTGGCCCCTTCA+TGG 0.361280 2_3:-15526823 Msa0280680:CDS
TCCGAAAAGATGGGCACAAC+TGG 0.365542 2_3:-15529001 Msa0280680:CDS
TTACATATGTCTAAAGGAAT+TGG 0.368058 2_3:+15524056 None:intergenic
GTTGGATCTGTCACCAAATT+GGG 0.373235 2_3:+15525316 None:intergenic
TTTGATCGTTAACACTTTCT+GGG 0.382927 2_3:+15527077 None:intergenic
TGTTCCTGTAGAAATTGTTC+AGG 0.386765 2_3:-15526576 Msa0280680:CDS
ACGCATACAAGCAGCGTTTA+GGG 0.390302 2_3:-15525047 Msa0280680:CDS
GCTTTGTTCGAAGATGTTAT+TGG 0.400349 2_3:-15528667 Msa0280680:CDS
TTTGAATTTAATGGTGTAAC+GGG 0.401316 2_3:+15527967 None:intergenic
GTAATATGAAATACTTGTTC+CGG 0.401537 2_3:+15526842 None:intergenic
TTGCTTTAGTATCTTGAAAT+GGG 0.403911 2_3:-15523934 Msa0280680:three_prime_UTR
TCCAGTACAGATTCCGTTCA+TGG 0.405822 2_3:-15524883 Msa0280680:CDS
TTAGCTCAATTTGCACACTA+TGG 0.408461 2_3:+15523970 None:intergenic
AGAGGACCAAGTGTACTTAA+AGG 0.409759 2_3:-15525110 Msa0280680:CDS
TAATCAACAATCTTCTCTTC+CGG 0.411008 2_3:-15526861 Msa0280680:CDS
TTCAATGACATGAGCTTAGC+TGG 0.412581 2_3:-15525193 Msa0280680:CDS
GAACAAAGCCTGGGTTATCT+TGG 0.413976 2_3:+15528681 None:intergenic
AAGAATCATTCTATAAATCT+TGG 0.420509 2_3:-15527055 Msa0280680:CDS
TGAGCTTAATACACTTGATT+GGG 0.422562 2_3:-15527508 Msa0280680:CDS
AGTACACTTGGTCCTCTGTA+AGG 0.423640 2_3:+15525116 None:intergenic
TTGTGGAGCAAAGCCCAATT+TGG 0.424453 2_3:-15525329 Msa0280680:CDS
TACTGAGGTGGCCCCTTCAT+GGG 0.431821 2_3:-15526822 Msa0280680:CDS
CTGCTGCCTCGGCTGTTGTC+CGG 0.435310 2_3:+15525071 None:intergenic
TAACATCTTCGAACAAAGCC+TGG 0.436408 2_3:+15528671 None:intergenic
CTTAGGAACTTCCGAAAAGA+TGG 0.440286 2_3:-15529011 Msa0280680:CDS
GCACGATCCGGCTGCTTCAA+TGG 0.440850 2_3:-15526432 Msa0280680:CDS
AGGATACATTGGCAGCTTAC+CGG 0.443232 2_3:-15525090 Msa0280680:CDS
TGGGTATTGCCGCATTCTCC+TGG 0.445050 2_3:-15526536 Msa0280680:CDS
GCAGCCGGATCGTGCAAAAT+CGG 0.445245 2_3:+15526440 None:intergenic
AGTACAGCCACCAGGGTATT+CGG 0.445573 2_3:+15525291 None:intergenic
TTGAATTTCGTCTTCAAATG+AGG 0.446176 2_3:-15526391 Msa0280680:CDS
CCGTGGGCTTGAGGTGAATC+CGG 0.447115 2_3:-15524615 Msa0280680:CDS
CACACAAATGAATTACACTT+TGG 0.449905 2_3:+15526093 None:intergenic
TTCTAACTCCGCCAGAGTCT+GGG 0.453587 2_3:-15527123 Msa0280680:CDS
AATTCATTTGTGTGCAATGT+TGG 0.456072 2_3:-15526084 Msa0280680:CDS
TTCGTGGTCAGGCTTGTCGC+TGG 0.456278 2_3:-15526036 Msa0280680:CDS
ATATTTGTAATTGCTGAGAA+TGG 0.457119 2_3:+15529530 None:intergenic
TTAGTCTCTTTCAGTGCAGT+AGG 0.457802 2_3:+15526308 None:intergenic
GTTACATTACATATGTCTAA+AGG 0.458134 2_3:+15524050 None:intergenic
CTTGTTGGTTCAGAGATACA+TGG 0.458740 2_3:-15530348 Msa0280680:CDS
AACTTCACAGGACAGCTTGT+TGG 0.464852 2_3:-15530363 Msa0280680:CDS
GTTTCTCCACATGCGACGTC+AGG 0.466290 2_3:-15524846 Msa0280680:CDS
AGAACATGGTGTGTAAGATA+TGG 0.466489 2_3:+15526955 None:intergenic
CGTAAGATTCTATGGTCTGT+TGG 0.472631 2_3:-15524686 Msa0280680:CDS
TTATCTTTCAGAAAAGTGTC+TGG 0.473332 2_3:-15525224 Msa0280680:CDS
GTGCAATGTTGGGATATACT+TGG 0.476598 2_3:-15526073 Msa0280680:CDS
TTGTATGCGTGCTGCTGCCT+CGG 0.476655 2_3:+15525060 None:intergenic
TATTTGACCGCAAGATGCTT+AGG 0.477000 2_3:-15529028 Msa0280680:CDS
TCCATGAACGGAATCTGTAC+TGG 0.477269 2_3:+15524882 None:intergenic
CAATGGAAGAGACATACAAC+TGG 0.483109 2_3:-15526415 Msa0280680:CDS
CCACCAGGGTATTCGGTAGT+TGG 0.483552 2_3:+15525298 None:intergenic
TCGTCTTTCATGTCTTCGTC+CGG 0.485670 2_3:+15524596 None:intergenic
AAGCGATGGCAGCCGCTGCT+CGG 0.490356 2_3:-15524907 Msa0280680:CDS
AAATAGAGATTCACGAATCC+AGG 0.491400 2_3:+15526518 None:intergenic
TGCTTAATTAAGATGTTTGG+TGG 0.491743 2_3:-15523894 Msa0280680:three_prime_UTR
CCTGTAGAAATTGTTCAGGT+TGG 0.492274 2_3:-15526572 Msa0280680:CDS
AATATGTAACTGAAATGATA+AGG 0.494690 2_3:-15523851 Msa0280680:three_prime_UTR
GAGAAAACATCAAGGGTCTT+CGG 0.497702 2_3:+15526344 None:intergenic
TCCTCAGAAATTCCTACGTA+TGG 0.499293 2_3:-15527148 Msa0280680:CDS
CCTGGATGTTGGCGAAACCT+TGG 0.500012 2_3:-15529595 Msa0280680:CDS
GAAGAGGACTTCTTTAAGAC+TGG 0.502934 2_3:-15524554 Msa0280680:CDS
AGACATGAAAGACGAGAAGC+AGG 0.503752 2_3:-15524588 Msa0280680:CDS
TTACATGAATTTGGAGAAGA+GGG 0.504725 2_3:+15530622 None:intergenic
GATACTAAAGCAATTTGAAA+GGG 0.507532 2_3:+15523944 None:intergenic
GGTTGGAGTTTACCGATGCT+GGG 0.508816 2_3:-15526555 Msa0280680:CDS
TGGATGGACAGCTCTTCATT+GGG 0.509818 2_3:-15525997 Msa0280680:CDS
ATTCATTTGTGTGCAATGTT+GGG 0.510037 2_3:-15526083 Msa0280680:CDS
AAAAGGTTTCCGTGGGCTTG+AGG 0.516403 2_3:-15524624 Msa0280680:CDS
ACATTACTGCTCCCAGACTC+TGG 0.516774 2_3:+15527112 None:intergenic
ACCATTCGTATAAGCACTGC+TGG 0.516953 2_3:+15527882 None:intergenic
ACATTATATTGGACTTTGCA+AGG 0.517791 2_3:+15526618 None:intergenic
ATGGATTCTATCAGAAGACT+TGG 0.519452 2_3:-15527914 Msa0280680:CDS
GTCTCTTCCATTGAAGCAGC+CGG 0.520513 2_3:+15526425 None:intergenic
CCAAGGTTTCGCCAACATCC+AGG 0.521156 2_3:+15529595 None:intergenic
AATCTCTATTTGAGCTTCGA+TGG 0.522019 2_3:-15526506 Msa0280680:CDS
ATTTGAATTTAATGGTGTAA+CGG 0.525829 2_3:+15527966 None:intergenic
GTTGCTACGTTGTTGTCTTG+TGG 0.526879 2_3:-15525346 Msa0280680:CDS
CCAACCTGAACAATTTCTAC+AGG 0.529057 2_3:+15526572 None:intergenic
GATATTCAAAATTAACAACT+TGG 0.530058 2_3:+15526468 None:intergenic
TCAGCAGCAGTACAGCCACC+AGG 0.531177 2_3:+15525283 None:intergenic
GGATGTTGGCGAAACCTTGG+AGG 0.534036 2_3:-15529592 Msa0280680:CDS
GTGTCTGGAGCACATAGTCC+TGG 0.535522 2_3:-15528446 Msa0280680:CDS
AGATACTAAAGCAATTTGAA+AGG 0.535779 2_3:+15523943 None:intergenic
CATGGATTTCATACCTTGAG+AGG 0.537027 2_3:-15530330 Msa0280680:intron
AGGACTTCTTTAAGACTGGT+AGG 0.538366 2_3:-15524550 Msa0280680:CDS
AGAATGGCGTGAATCTCATT+CGG 0.538668 2_3:+15529546 None:intergenic
TTTACATGAATTTGGAGAAG+AGG 0.539840 2_3:+15530621 None:intergenic
TATGAAGTTTGTTGTGCTTG+TGG 0.542301 2_3:-15530435 Msa0280680:five_prime_UTR
ACATTGTCAAAGCTGCCATT+CGG 0.542413 2_3:+15527315 None:intergenic
GCTGATCTTGCTTATATGAA+AGG 0.543937 2_3:-15525265 Msa0280680:CDS
TTTCAACGCAATTTCGAACA+AGG 0.546511 2_3:+15526187 None:intergenic
ATGCATTGTACTACCTCTCA+AGG 0.551345 2_3:+15530317 None:intergenic
AAGTCTTCTGATAGAATCCA+TGG 0.551451 2_3:+15527916 None:intergenic
TTGAGAAAGTAATCCTGCGT+TGG 0.551923 2_3:-15524658 Msa0280680:CDS
TCTTGTCTCAAAGTTGCGAA+AGG 0.552815 2_3:+15524931 None:intergenic
AATCATTCTATAAATCTTGG+TGG 0.555184 2_3:-15527052 Msa0280680:CDS
TACGTAGGAATTTCTGAGGA+AGG 0.556506 2_3:+15527151 None:intergenic
GCAGGAAAGCGATGTAGAAG+AGG 0.559635 2_3:-15524570 Msa0280680:CDS
ATGGCACAAAACAACTTCAC+AGG 0.561027 2_3:-15530375 Msa0280680:CDS
CAGTGGAAGAAACCCATGAA+GGG 0.564862 2_3:+15526810 None:intergenic
AACATCTTCGAACAAAGCCT+GGG 0.568972 2_3:+15528672 None:intergenic
ACATCATAAGTTCCTATGAA+AGG 0.572930 2_3:-15524099 Msa0280680:exon
GTGTTTCACGATAATGAACC+AGG 0.574522 2_3:+15528428 None:intergenic
ACTAAAATTGCGATATCAGT+CGG 0.575281 2_3:-15525017 Msa0280680:CDS
GTCAGAATAGCTTTGGAACG+TGG 0.576268 2_3:-15526988 Msa0280680:CDS
TTCATTGACTAAAATGTCAA+CGG 0.578344 2_3:+15527021 None:intergenic
ATTTACTGGATCAGTTGTAG+TGG 0.578741 2_3:+15525147 None:intergenic
GCAAATTCAATGGCTTGACA+TGG 0.579151 2_3:+15529499 None:intergenic
ACCAGCAGTGCTTATACGAA+TGG 0.580709 2_3:-15527883 Msa0280680:intron
TTAAAGAGAAAAGGTTTCCG+TGG 0.583364 2_3:-15524632 Msa0280680:CDS
TAAAGAGAAAAGGTTTCCGT+GGG 0.583584 2_3:-15524631 Msa0280680:CDS
ATGTATCCTTTAAGTACACT+TGG 0.583656 2_3:+15525104 None:intergenic
AGTGTACTTAAAGGATACAT+TGG 0.584610 2_3:-15525101 Msa0280680:CDS
GCTTATATGAAAGGATATGA+CGG 0.585929 2_3:-15525256 Msa0280680:CDS
AGTATTTCATATTACTGAGG+TGG 0.586077 2_3:-15526834 Msa0280680:CDS
ATTTCCGCGACAAATTTGGA+TGG 0.586245 2_3:-15526013 Msa0280680:CDS
CTTCACTAGAGAAAACATCA+AGG 0.586742 2_3:+15526336 None:intergenic
ACTTGATTGGGATGAACTAG+TGG 0.587256 2_3:-15527496 Msa0280680:CDS
TAATAGCCTGACGTCGCATG+TGG 0.587369 2_3:+15524840 None:intergenic
TATGACTCAGACCTGGATGT+TGG 0.588242 2_3:-15529606 Msa0280680:intron
AGAAGAGGGTCTGTTCTGAA+TGG 0.588902 2_3:+15530636 None:intergenic
TCAGTGGAAGAAACCCATGA+AGG 0.594547 2_3:+15526809 None:intergenic
AGAGAAAATATCCAGTTACC+AGG 0.595253 2_3:+15526654 None:intergenic
CTCTACGCAACTTCCATGAA+CGG 0.595420 2_3:+15524870 None:intergenic
ACTTGTCATAGGTGTGATGA+TGG 0.601222 2_3:-15530394 Msa0280680:exon
CAGCAGCAGTACAGCCACCA+GGG 0.604424 2_3:+15525284 None:intergenic
GGAAGTTCCTAAGCATCTTG+CGG 0.606340 2_3:+15529021 None:intergenic
TTAGAGGCTTTCAAGTGCGT+AGG 0.607046 2_3:-15524715 Msa0280680:CDS
GGTTCAATTTATTAGTCCAG+AGG 0.607949 2_3:-15524996 Msa0280680:CDS
TTCTCTTTAAAAGCCAACGC+AGG 0.610360 2_3:+15524645 None:intergenic
TCAATTTATTAGTCCAGAGG+AGG 0.612402 2_3:-15524993 Msa0280680:CDS
TGCAATGTTGGGATATACTT+GGG 0.615912 2_3:-15526072 Msa0280680:CDS
TTAGGAACTTCCGAAAAGAT+GGG 0.618001 2_3:-15529010 Msa0280680:CDS
AGCTTACCGGACAACAGCCG+AGG 0.619242 2_3:-15525077 Msa0280680:CDS
CTTTGAGACAAGAAAAGCGA+TGG 0.619428 2_3:-15524921 Msa0280680:CDS
CTAAATCAAAGCTTACCGAA+TGG 0.621517 2_3:-15527330 Msa0280680:CDS
TTCACGAATCCAGGAGAATG+CGG 0.627682 2_3:+15526527 None:intergenic
TTCTTCCACTGAGAAAACAA+AGG 0.631295 2_3:-15526798 Msa0280680:intron
AGAACTCATCAATTCTGATG+TGG 0.633421 2_3:-15524139 Msa0280680:CDS
TTCACTAGAGAAAACATCAA+GGG 0.636868 2_3:+15526337 None:intergenic
CCGGATTCACCTCAAGCCCA+CGG 0.642313 2_3:+15524615 None:intergenic
TTTCTGATACAACTGCACCA+TGG 0.644660 2_3:-15527933 Msa0280680:CDS
AATGCGGCAATACCCAGCAT+CGG 0.652701 2_3:+15526543 None:intergenic
AGTGGAAGAAACCCATGAAG+GGG 0.653131 2_3:+15526811 None:intergenic
TTACACACCATGTTCTGTAG+AGG 0.653988 2_3:-15526948 Msa0280680:CDS
ACCCCTACTATACAAAATGG+AGG 0.655140 2_3:-15527459 Msa0280680:intron
AGCTTAGCTGGAAATATCAG+CGG 0.656009 2_3:-15525181 Msa0280680:CDS
AATGGATCATGAACAGACGA+AGG 0.658327 2_3:+15526902 None:intergenic
TAAGACTGGTAGGAAACAAG+CGG 0.659485 2_3:-15524540 Msa0280680:CDS
ACCATACGTAGGAATTTCTG+AGG 0.659507 2_3:+15527147 None:intergenic
CTGTCCATCCAAATTTGTCG+CGG 0.660885 2_3:+15526009 None:intergenic
ACAAGTATTTCATATTACTG+AGG 0.664709 2_3:-15526837 Msa0280680:CDS
GGCCGTGTGCATAATATACG+TGG 0.667740 2_3:+15528702 None:intergenic
TCATTATCGTGAAACACAAG+AGG 0.669255 2_3:-15528422 Msa0280680:intron
TCCAATATAATGTGTGTCTG+TGG 0.683099 2_3:-15526608 Msa0280680:CDS
GTTGACGCCTCTACAGAACA+TGG 0.690824 2_3:+15526941 None:intergenic
GATCCAACTACCGAATACCC+TGG 0.692497 2_3:-15525301 Msa0280680:CDS
TTACTGCTCCCAGACTCTGG+CGG 0.695060 2_3:+15527115 None:intergenic
ATCCACGTATATTATGCACA+CGG 0.702464 2_3:-15528704 Msa0280680:CDS
TCTGTACTGGATCCGAGCAG+CGG 0.708022 2_3:+15524895 None:intergenic
AATGGAAGAGACATACAACT+GGG 0.712092 2_3:-15526414 Msa0280680:CDS
GCACACGGCCAAGATAACCC+AGG 0.722098 2_3:-15528689 Msa0280680:CDS
AGAACGCGTTGAGAGATCTG+TGG 0.723214 2_3:-15524516 Msa0280680:intron
ACTACTGAGTATGATGCACA+AGG 0.723260 2_3:-15526116 Msa0280680:CDS
GGAGTTAGAATACCATACGT+AGG 0.723293 2_3:+15527136 None:intergenic
TGATTTAGTTGATAGTAACG+CGG 0.738031 2_3:+15527345 None:intergenic
AAATGCTGAGAACCTTACAG+AGG 0.749608 2_3:-15525128 Msa0280680:CDS
CCAACTACCGAATACCCTGG+TGG 0.762091 2_3:-15525298 Msa0280680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAATGAAAAATCAAAA+GGG + chr2_3:15523897-15523916 None:intergenic 10.0%
!! AATAAAAATGAAAAATCAAA+AGG + chr2_3:15523898-15523917 None:intergenic 10.0%
!! ATCATATTATATAGTATATA+TGG + chr2_3:15525046-15525065 None:intergenic 10.0%
!! ATTTATTTATTGAAGAAAAT+TGG - chr2_3:15526425-15526444 Msa0280680:CDS 10.0%
!! TTTATTTATTGAAGAAAATT+GGG - chr2_3:15526426-15526445 Msa0280680:CDS 10.0%
!! TATATCATTATAATCAATTA+AGG + chr2_3:15526759-15526778 None:intergenic 10.0%
!! AACAAAAAATAATTACAATT+TGG - chr2_3:15530090-15530109 Msa0280680:intron 10.0%
!! ATGATAAATTTACATGAATT+TGG + chr2_3:15523853-15523872 None:intergenic 15.0%
!! TAAAAATGAAAAATCAAAAG+GGG + chr2_3:15523896-15523915 None:intergenic 15.0%
!!! AATAACTGTTGTTTTTTTTT+TGG - chr2_3:15523956-15523975 Msa0280680:three_prime_UTR 15.0%
!!! TATTTTTATTTTTTTTGTGG+AGG - chr2_3:15524264-15524283 Msa0280680:intron 15.0%
!!! ATTTTTATTTTTTTTGTGGA+GGG - chr2_3:15524265-15524284 Msa0280680:intron 15.0%
!!! TATTTTGATGTTTAATTGTT+TGG - chr2_3:15524291-15524310 Msa0280680:intron 15.0%
!! ATTTCAAATATATCGTAAAA+AGG + chr2_3:15524652-15524671 None:intergenic 15.0%
!! AGAAAAACAATAAAAACAAT+CGG + chr2_3:15525992-15526011 None:intergenic 15.0%
!!! TATACGTTAAATTTAACTTT+TGG - chr2_3:15527084-15527103 Msa0280680:CDS 15.0%
!! AAAAATAATTACAATTTGGA+TGG - chr2_3:15530094-15530113 Msa0280680:intron 15.0%
!!! TTTTTTTCTTTTCTTTGTAT+AGG - chr2_3:15530445-15530464 Msa0280680:intron 15.0%
!! AATAAAATTAAACCAAACCA+AGG + chr2_3:15524244-15524263 None:intergenic 20.0%
!!! TTTTTATTTTTTTTGTGGAG+GGG - chr2_3:15524266-15524285 Msa0280680:intron 20.0%
!!! TATAATTTTCAATGCAACTT+AGG - chr2_3:15524359-15524378 Msa0280680:intron 20.0%
!! AAGATTTCTGATTAAACAAA+AGG + chr2_3:15524521-15524540 None:intergenic 20.0%
!! TTGTTTAATCAGAAATCTTT+CGG - chr2_3:15524522-15524541 Msa0280680:CDS 20.0%
!!! TTACGATATATTTGAAATAC+TGG - chr2_3:15524654-15524673 Msa0280680:CDS 20.0%
!!! TTTTGTTTATTTGATGTTGA+GGG - chr2_3:15525561-15525580 Msa0280680:intron 20.0%
!! AATCAAATACAACATAACTA+TGG + chr2_3:15525636-15525655 None:intergenic 20.0%
!!! ATTTATGATCTATGTTTTTG+TGG - chr2_3:15525898-15525917 Msa0280680:intron 20.0%
!!! GTTTTTATTGTTTTTCTTTC+AGG - chr2_3:15525995-15526014 Msa0280680:CDS 20.0%
!! AAAACCAAAAAAAATACTTG+TGG + chr2_3:15526163-15526182 None:intergenic 20.0%
!! CAATAAATAAATAGATCACA+TGG + chr2_3:15526417-15526436 None:intergenic 20.0%
!! ATTTGAATTTAATGGTGTAA+CGG + chr2_3:15526500-15526519 None:intergenic 20.0%
!! TCATTATAATCAATTAAGGT+TGG + chr2_3:15526755-15526774 None:intergenic 20.0%
!! AACAATATATCATAACCAAT+AGG + chr2_3:15526813-15526832 None:intergenic 20.0%
!! ATTTAACGTATAAAATTGCA+AGG + chr2_3:15527076-15527095 None:intergenic 20.0%
!!! TCTATAGAGTTTTTATAAAC+AGG - chr2_3:15527278-15527297 Msa0280680:intron 20.0%
!! AAGAATCATTCTATAAATCT+TGG - chr2_3:15527408-15527427 Msa0280680:intron 20.0%
!! GAAATATGAGAAAAAGAAAA+AGG + chr2_3:15527694-15527713 None:intergenic 20.0%
!! GATATTCAAAATTAACAACT+TGG + chr2_3:15527998-15528017 None:intergenic 20.0%
!!! TTTGGAAAGAAATAATGTTT+TGG + chr2_3:15528192-15528211 None:intergenic 20.0%
!! GACAAATTTCATATAGTTTA+AGG + chr2_3:15528660-15528679 None:intergenic 20.0%
!!! TTTGTTTGAAATTTGTCTTA+GGG - chr2_3:15529086-15529105 Msa0280680:intron 20.0%
!! AAATTAATCACGTATTTGAA+CGG + chr2_3:15530126-15530145 None:intergenic 20.0%
!! GTTAATACAATTCAAATACA+TGG + chr2_3:15530219-15530238 None:intergenic 20.0%
!!! TATTATGATTTGATTTGACA+TGG - chr2_3:15530254-15530273 Msa0280680:intron 20.0%
!!! TATGAAAGGTATATGTTTTT+GGG - chr2_3:15530378-15530397 Msa0280680:CDS 20.0%
!! AATATGTAACTGAAATGATA+AGG - chr2_3:15530612-15530631 Msa0280680:intron 20.0%
!! TCTAATAATCACATCAAATA+AGG + chr2_3:15530638-15530657 None:intergenic 20.0%
! GTTTCTATTAATGTTGTTGT+AGG - chr2_3:15524004-15524023 Msa0280680:three_prime_UTR 25.0%
!! TATTCTTATTTATGCTACCT+TGG - chr2_3:15524224-15524243 Msa0280680:intron 25.0%
! TGATGTTTAATTGTTTGGTA+TGG - chr2_3:15524296-15524315 Msa0280680:intron 25.0%
!!! AGTGAAAAAAGAAGTTTTGT+CGG - chr2_3:15524382-15524401 Msa0280680:intron 25.0%
!!! ATGCTTTTTTTCTTTGTAAC+CGG + chr2_3:15524579-15524598 None:intergenic 25.0%
!! AAGGAAATTGTTACTGTTTT+AGG + chr2_3:15524633-15524652 None:intergenic 25.0%
! TAGCAAACACTACATTTAAT+TGG + chr2_3:15524724-15524743 None:intergenic 25.0%
! ATATTTGTAATTGCTGAGAA+TGG + chr2_3:15524936-15524955 None:intergenic 25.0%
!! TCTGATAGCAATATACTTTT+GGG + chr2_3:15524989-15525008 None:intergenic 25.0%
!! TTCTGATAGCAATATACTTT+TGG + chr2_3:15524990-15525009 None:intergenic 25.0%
! ATGCATTGTTCAACTATATA+TGG - chr2_3:15525215-15525234 Msa0280680:CDS 25.0%
! TCCTACATAGATCTATTTAA+TGG - chr2_3:15525273-15525292 Msa0280680:CDS 25.0%
! TCCATTAAATAGATCTATGT+AGG + chr2_3:15525277-15525296 None:intergenic 25.0%
! ACATCATATAACTCACAATA+AGG + chr2_3:15525352-15525371 None:intergenic 25.0%
! TATAATGTTGTGTGTAAAAC+AGG - chr2_3:15525398-15525417 Msa0280680:intron 25.0%
! AACTGGAAAAAGAAAAATGA+CGG - chr2_3:15525479-15525498 Msa0280680:intron 25.0%
!!! GTTTTGTTTATTTGATGTTG+AGG - chr2_3:15525560-15525579 Msa0280680:intron 25.0%
! AACATGCATACACAATATAT+AGG + chr2_3:15525875-15525894 None:intergenic 25.0%
!! CATATATGTCTTTATTTGTC+TGG + chr2_3:15526117-15526136 None:intergenic 25.0%
!!! GTATTTTTTTTGGTTTTCTG+AGG - chr2_3:15526166-15526185 Msa0280680:CDS 25.0%
!!! GCTTGTTTTAGAAACAAATT+TGG + chr2_3:15526263-15526282 None:intergenic 25.0%
! AAATCACACATATCAATCAT+GGG + chr2_3:15526386-15526405 None:intergenic 25.0%
! TAAATCACACATATCAATCA+TGG + chr2_3:15526387-15526406 None:intergenic 25.0%
! AATAAATAGATCACATGGTA+AGG + chr2_3:15526412-15526431 None:intergenic 25.0%
! TTTGAATTTAATGGTGTAAC+GGG + chr2_3:15526499-15526518 None:intergenic 25.0%
!! ATATAGTGTTGTTACACATT+AGG - chr2_3:15526774-15526793 Msa0280680:intron 25.0%
!! GTAATTGTTTCTTCTTTATC+TGG - chr2_3:15527026-15527045 Msa0280680:CDS 25.0%
! TAAAGAACACAAATGAAAGA+AGG + chr2_3:15527183-15527202 None:intergenic 25.0%
! AATCATTCTATAAATCTTGG+TGG - chr2_3:15527411-15527430 Msa0280680:intron 25.0%
!! TTCATTGACTAAAATGTCAA+CGG + chr2_3:15527445-15527464 None:intergenic 25.0%
! GTAATATGAAATACTTGTTC+CGG + chr2_3:15527624-15527643 None:intergenic 25.0%
! ACAAGTATTTCATATTACTG+AGG - chr2_3:15527626-15527645 Msa0280680:intron 25.0%
! AAATTAACAACTTGGCTAAT+AGG + chr2_3:15527990-15528009 None:intergenic 25.0%
!! CATGAAGTGTATAAAACTTT+TGG + chr2_3:15528210-15528229 None:intergenic 25.0%
! ACCAAAATGGAATAATTTGA+CGG + chr2_3:15528709-15528728 None:intergenic 25.0%
!! GTTTGTTTGAAATTTGTCTT+AGG - chr2_3:15529085-15529104 Msa0280680:intron 25.0%
! CAACTTAAAGAGAAAAATTC+AGG + chr2_3:15529689-15529708 None:intergenic 25.0%
!! CTGAATTTTTCTCTTTAAGT+TGG - chr2_3:15529687-15529706 Msa0280680:intron 25.0%
! GGTTAATTGCATTTAATAGA+CGG + chr2_3:15530198-15530217 None:intergenic 25.0%
! ATTTGACATGGTTATTAACT+TGG - chr2_3:15530266-15530285 Msa0280680:intron 25.0%
! CAAAAACATATACCTTTCAT+AGG + chr2_3:15530379-15530398 None:intergenic 25.0%
!!! CTATGAAAGGTATATGTTTT+TGG - chr2_3:15530377-15530396 Msa0280680:CDS 25.0%
! TTACATATGTCTAAAGGAAT+TGG + chr2_3:15530410-15530429 None:intergenic 25.0%
! GTTACATTACATATGTCTAA+AGG + chr2_3:15530416-15530435 None:intergenic 25.0%
! GATACTAAAGCAATTTGAAA+GGG + chr2_3:15530522-15530541 None:intergenic 25.0%
! AGATACTAAAGCAATTTGAA+AGG + chr2_3:15530523-15530542 None:intergenic 25.0%
! ATTGCTTTAGTATCTTGAAA+TGG - chr2_3:15530528-15530547 Msa0280680:intron 25.0%
! TTGCTTTAGTATCTTGAAAT+GGG - chr2_3:15530529-15530548 Msa0280680:intron 25.0%
! TCATGCTTAATTAAGATGTT+TGG - chr2_3:15530566-15530585 Msa0280680:intron 25.0%
TTACATGAATTTGGAGAAGA+GGG + chr2_3:15523844-15523863 None:intergenic 30.0%
TTTACATGAATTTGGAGAAG+AGG + chr2_3:15523845-15523864 None:intergenic 30.0%
!!! TTTTTTTTTGGTCGTGTAGT+TGG - chr2_3:15523968-15523987 Msa0280680:three_prime_UTR 30.0%
AGAAGAGAAAAACTTGTCAT+AGG - chr2_3:15524058-15524077 Msa0280680:three_prime_UTR 30.0%
TTATTTATGCTACCTTGGTT+TGG - chr2_3:15524229-15524248 Msa0280680:intron 30.0%
TAAAAGTTGTCGAAGATTTG+AGG + chr2_3:15524432-15524451 None:intergenic 30.0%
GATAGATGTTAGTAAGTTAG+TGG - chr2_3:15524462-15524481 Msa0280680:intron 30.0%
TATTATATATGACTCAGACC+TGG - chr2_3:15524850-15524869 Msa0280680:CDS 30.0%
! ATACTTTTGGGCAAATTCAA+TGG + chr2_3:15524977-15524996 None:intergenic 30.0%
AAGCTTCAACAAGAACTAAA+GGG + chr2_3:15525139-15525158 None:intergenic 30.0%
AAAGCTTCAACAAGAACTAA+AGG + chr2_3:15525140-15525159 None:intergenic 30.0%
TGAGTTATATGATGTCAAAC+AGG - chr2_3:15525357-15525376 Msa0280680:CDS 30.0%
ACTGGAAAAAGAAAAATGAC+GGG - chr2_3:15525480-15525499 Msa0280680:intron 30.0%
!!! CTTTTTTCCACTTATCAATC+AGG - chr2_3:15525719-15525738 Msa0280680:intron 30.0%
! TATGTTTAGCTTAACCCTTA+AGG - chr2_3:15525841-15525860 Msa0280680:intron 30.0%
TATAGGAATCGAAACCTTAA+GGG + chr2_3:15525858-15525877 None:intergenic 30.0%
ATATAGGAATCGAAACCTTA+AGG + chr2_3:15525859-15525878 None:intergenic 30.0%
!! GTTCAATTTTTAAGAGGCAA+AGG + chr2_3:15526090-15526109 None:intergenic 30.0%
!! GGTGAAGTTCAATTTTTAAG+AGG + chr2_3:15526096-15526115 None:intergenic 30.0%
!!! GACTCCACAAGTATTTTTTT+TGG - chr2_3:15526156-15526175 Msa0280680:CDS 30.0%
TTTACCGATGAATGTGTTTA+AGG - chr2_3:15526206-15526225 Msa0280680:CDS 30.0%
TTACCGATGAATGTGTTTAA+GGG - chr2_3:15526207-15526226 Msa0280680:CDS 30.0%
ATACCCTTAAACACATTCAT+CGG + chr2_3:15526213-15526232 None:intergenic 30.0%
! AACGAAGTTTTTCTAGACTT+GGG + chr2_3:15526236-15526255 None:intergenic 30.0%
!! TATCCACTTTTAGATTGTCA+TGG - chr2_3:15526288-15526307 Msa0280680:CDS 30.0%
!! ATCCACTTTTAGATTGTCAT+GGG - chr2_3:15526289-15526308 Msa0280680:CDS 30.0%
GGACTCACATTTGAATTTAA+TGG + chr2_3:15526508-15526527 None:intergenic 30.0%
GGATAATACTATCAACCTAT+TGG - chr2_3:15526795-15526814 Msa0280680:intron 30.0%
GTTGTTGTCATAGATATTGT+TGG - chr2_3:15526830-15526849 Msa0280680:CDS 30.0%
GGAATGAAAATAGGTATCTA+CGG + chr2_3:15526869-15526888 None:intergenic 30.0%
ACAGTAAAGGGAATGAAAAT+AGG + chr2_3:15526878-15526897 None:intergenic 30.0%
ATGAGCTTAATACACTTGAT+TGG - chr2_3:15526954-15526973 Msa0280680:CDS 30.0%
TGAGCTTAATACACTTGATT+GGG - chr2_3:15526955-15526974 Msa0280680:CDS 30.0%
AATACCCCTACTATACAAAA+TGG - chr2_3:15527001-15527020 Msa0280680:CDS 30.0%
! TACCTCCATTTTGTATAGTA+GGG + chr2_3:15527009-15527028 None:intergenic 30.0%
! TTACCTCCATTTTGTATAGT+AGG + chr2_3:15527010-15527029 None:intergenic 30.0%
!! CGTTAAATTTAACTTTTGGC+AGG - chr2_3:15527088-15527107 Msa0280680:CDS 30.0%
!! TGATTTAGTTGATAGTAACG+CGG + chr2_3:15527121-15527140 None:intergenic 30.0%
TATCACTAGAAGACAGAAAA+AGG + chr2_3:15527226-15527245 None:intergenic 30.0%
! AGTTTTTATAAACAGGTTGC+TGG - chr2_3:15527285-15527304 Msa0280680:intron 30.0%
TTTGATCGTTAACACTTTCT+GGG + chr2_3:15527389-15527408 None:intergenic 30.0%
! TTTTGATCGTTAACACTTTC+TGG + chr2_3:15527390-15527409 None:intergenic 30.0%
!! GTTGACATTTTAGTCAATGA+AGG - chr2_3:15527444-15527463 Msa0280680:intron 30.0%
TAATCAACAATCTTCTCTTC+CGG - chr2_3:15527602-15527621 Msa0280680:intron 30.0%
AGTATTTCATATTACTGAGG+TGG - chr2_3:15527629-15527648 Msa0280680:intron 30.0%
ACATTATATTGGACTTTGCA+AGG + chr2_3:15527848-15527867 None:intergenic 30.0%
TTGAATTTCGTCTTCAAATG+AGG - chr2_3:15528072-15528091 Msa0280680:intron 30.0%
TTCACTAGAGAAAACATCAA+GGG + chr2_3:15528129-15528148 None:intergenic 30.0%
!! GGAAAGAAATAATGTTTTGG+AGG + chr2_3:15528189-15528208 None:intergenic 30.0%
!!! CTTTTGGAACGTATTGTTTT+AGG - chr2_3:15528317-15528336 Msa0280680:intron 30.0%
CACACAAATGAATTACACTT+TGG + chr2_3:15528373-15528392 None:intergenic 30.0%
AATTCATTTGTGTGCAATGT+TGG - chr2_3:15528379-15528398 Msa0280680:intron 30.0%
ATTCATTTGTGTGCAATGTT+GGG - chr2_3:15528380-15528399 Msa0280680:intron 30.0%
AATCTGTTTGTTCAAACAAG+TGG + chr2_3:15528526-15528545 None:intergenic 30.0%
ACTTAGGAGACAAAATTGAT+GGG + chr2_3:15528586-15528605 None:intergenic 30.0%
TACTTAGGAGACAAAATTGA+TGG + chr2_3:15528587-15528606 None:intergenic 30.0%
! GACGGATTTCATTTAGTTTA+TGG + chr2_3:15528691-15528710 None:intergenic 30.0%
! TCCGTCAAATTATTCCATTT+TGG - chr2_3:15528705-15528724 Msa0280680:CDS 30.0%
CTTGTTAGTATACACCAAAA+TGG + chr2_3:15528722-15528741 None:intergenic 30.0%
GTATACTAACAAGAGATACT+AGG - chr2_3:15528729-15528748 Msa0280680:intron 30.0%
ATATAGTTTAGAGACCAAAC+AGG - chr2_3:15528831-15528850 Msa0280680:intron 30.0%
AATTGGGTAAACCATCAATT+TGG + chr2_3:15528877-15528896 None:intergenic 30.0%
GAAGCAATGTCAGAAAAATT+GGG + chr2_3:15528893-15528912 None:intergenic 30.0%
TGAAGCAATGTCAGAAAAAT+TGG + chr2_3:15528894-15528913 None:intergenic 30.0%
! TCATTAAGTTAAGCACTGTA+AGG - chr2_3:15528982-15529001 Msa0280680:CDS 30.0%
!! TTAAGCACTGTAAGGTTTTT+AGG - chr2_3:15528990-15529009 Msa0280680:CDS 30.0%
AAACAATGATATTTCCGTTC+AGG + chr2_3:15529065-15529084 None:intergenic 30.0%
AATTTGTCTTAGGGAGAATA+TGG - chr2_3:15529095-15529114 Msa0280680:intron 30.0%
GCTTATATGAAAGGATATGA+CGG - chr2_3:15529207-15529226 Msa0280680:intron 30.0%
!! TTATCTTTCAGAAAAGTGTC+TGG - chr2_3:15529239-15529258 Msa0280680:intron 30.0%
ATGTATCCTTTAAGTACACT+TGG + chr2_3:15529362-15529381 None:intergenic 30.0%
AGTGTACTTAAAGGATACAT+TGG - chr2_3:15529362-15529381 Msa0280680:intron 30.0%
ACTAAAATTGCGATATCAGT+CGG - chr2_3:15529446-15529465 Msa0280680:intron 30.0%
!! TTAAGTTGGTAATGCTTGAT+TGG - chr2_3:15529701-15529720 Msa0280680:intron 30.0%
! ATTGGTTATATTTTCGATGC+AGG - chr2_3:15529719-15529738 Msa0280680:intron 30.0%
ACATCATAAGTTCCTATGAA+AGG - chr2_3:15530364-15530383 Msa0280680:CDS 30.0%
TGCTTAATTAAGATGTTTGG+TGG - chr2_3:15530569-15530588 Msa0280680:intron 30.0%
TAATGCACTCTGTTCTTCTT+TGG + chr2_3:15523775-15523794 None:intergenic 35.0%
GTACTAACTGTGAACAGAAA+AGG + chr2_3:15523924-15523943 None:intergenic 35.0%
!! TATGAAGTTTGTTGTGCTTG+TGG - chr2_3:15524028-15524047 Msa0280680:three_prime_UTR 35.0%
TTAACTCACCAACCGATTAA+GGG - chr2_3:15524551-15524570 Msa0280680:CDS 35.0%
!! GGTTCTAAACTATATGTCGA+TGG + chr2_3:15524703-15524722 None:intergenic 35.0%
TGAGTAGAAGTAGAAACATG+TGG - chr2_3:15524753-15524772 Msa0280680:intron 35.0%
TATTGCTATCAGAACTAACC+TGG - chr2_3:15524996-15525015 Msa0280680:CDS 35.0%
AATGTTGTGTGTAAAACAGG+TGG - chr2_3:15525401-15525420 Msa0280680:intron 35.0%
TTAGGAACTTCCGAAAAGAT+GGG - chr2_3:15525453-15525472 Msa0280680:intron 35.0%
TTTCCACTTATCAATCAGGT+TGG - chr2_3:15525723-15525742 Msa0280680:intron 35.0%
TTACCAACCTGATTGATAAG+TGG + chr2_3:15525729-15525748 None:intergenic 35.0%
ATCCACGTATATTATGCACA+CGG - chr2_3:15525759-15525778 Msa0280680:intron 35.0%
! GCTTTGTTCGAAGATGTTAT+TGG - chr2_3:15525796-15525815 Msa0280680:intron 35.0%
!! TTGTTTTTCTTTCAGGTGTC+TGG - chr2_3:15526002-15526021 Msa0280680:CDS 35.0%
TCATTATCGTGAAACACAAG+AGG - chr2_3:15526041-15526060 Msa0280680:CDS 35.0%
AACACATTCATCGGTAAACA+AGG + chr2_3:15526204-15526223 None:intergenic 35.0%
! CAACGAAGTTTTTCTAGACT+TGG + chr2_3:15526237-15526256 None:intergenic 35.0%
AACCCATGACAATCTAAAAG+TGG + chr2_3:15526294-15526313 None:intergenic 35.0%
ACATATCAATCATGGGACTT+CGG + chr2_3:15526379-15526398 None:intergenic 35.0%
AAGTCTTCTGATAGAATCCA+TGG + chr2_3:15526550-15526569 None:intergenic 35.0%
ATGGATTCTATCAGAAGACT+TGG - chr2_3:15526549-15526568 Msa0280680:CDS 35.0%
AAAATAGGTATCTACGGTCA+AGG + chr2_3:15526863-15526882 None:intergenic 35.0%
! ACCTCCATTTTGTATAGTAG+GGG + chr2_3:15527008-15527027 None:intergenic 35.0%
CTAAATCAAAGCTTACCGAA+TGG - chr2_3:15527133-15527152 Msa0280680:CDS 35.0%
TTGCAAAGTCAGAATAGCTT+TGG - chr2_3:15527468-15527487 Msa0280680:CDS 35.0%
AGAACATGGTGTGTAAGATA+TGG + chr2_3:15527511-15527530 None:intergenic 35.0%
! TCATGATCCATTTTCATCAC+TGG - chr2_3:15527572-15527591 Msa0280680:intron 35.0%
TTCTTCCACTGAGAAAACAA+AGG - chr2_3:15527665-15527684 Msa0280680:intron 35.0%
AGAGAAAATATCCAGTTACC+AGG + chr2_3:15527812-15527831 None:intergenic 35.0%
TCCAATATAATGTGTGTCTG+TGG - chr2_3:15527855-15527874 Msa0280680:intron 35.0%
TGTTCCTGTAGAAATTGTTC+AGG - chr2_3:15527887-15527906 Msa0280680:CDS 35.0%
AAATAGAGATTCACGAATCC+AGG + chr2_3:15527948-15527967 None:intergenic 35.0%
AATCTCTATTTGAGCTTCGA+TGG - chr2_3:15527957-15527976 Msa0280680:CDS 35.0%
AATGGAAGAGACATACAACT+GGG - chr2_3:15528049-15528068 Msa0280680:intron 35.0%
CTTCACTAGAGAAAACATCA+AGG + chr2_3:15528130-15528149 None:intergenic 35.0%
! GTATTTTTCGCTTGCAGAAA+GGG + chr2_3:15528257-15528276 None:intergenic 35.0%
TTTCAACGCAATTTCGAACA+AGG + chr2_3:15528279-15528298 None:intergenic 35.0%
TTGCGTTGAAAAACAAACTC+AGG - chr2_3:15528288-15528307 Msa0280680:intron 35.0%
TGCGTTGAAAAACAAACTCA+GGG - chr2_3:15528289-15528308 Msa0280680:intron 35.0%
TGAAAAACAAACTCAGGGAA+TGG - chr2_3:15528294-15528313 Msa0280680:intron 35.0%
TGCAATGTTGGGATATACTT+GGG - chr2_3:15528391-15528410 Msa0280680:intron 35.0%
!!! ATTACTTTGTTTTCGTGGTC+AGG - chr2_3:15528416-15528435 Msa0280680:intron 35.0%
GATACTAGGAACTAAAGAAG+CGG - chr2_3:15528743-15528762 Msa0280680:intron 35.0%
TAGTTTAGAGACCAACTTGA+TGG - chr2_3:15528774-15528793 Msa0280680:intron 35.0%
TACTTGAGAGACCAAATTGA+TGG - chr2_3:15528863-15528882 Msa0280680:intron 35.0%
AGGCTCATAACTAGATTAGA+AGG + chr2_3:15529045-15529064 None:intergenic 35.0%
AATCTAGTTATGAGCCTGAA+CGG - chr2_3:15529048-15529067 Msa0280680:intron 35.0%
GCTGATCTTGCTTATATGAA+AGG - chr2_3:15529198-15529217 Msa0280680:intron 35.0%
ATTTACTGGATCAGTTGTAG+TGG + chr2_3:15529319-15529338 None:intergenic 35.0%
GGTTCAATTTATTAGTCCAG+AGG - chr2_3:15529467-15529486 Msa0280680:intron 35.0%
TCAATTTATTAGTCCAGAGG+AGG - chr2_3:15529470-15529489 Msa0280680:intron 35.0%
! TTTTCATTGCTGCTACTATC+TGG + chr2_3:15529503-15529522 None:intergenic 35.0%
GGCAATATCGTAAGATTCTA+TGG - chr2_3:15529769-15529788 Msa0280680:intron 35.0%
!!! CGTTGGCTTTTAAAGAGAAA+AGG - chr2_3:15529822-15529841 Msa0280680:intron 35.0%
TTAAAGAGAAAAGGTTTCCG+TGG - chr2_3:15529831-15529850 Msa0280680:intron 35.0%
TAAAGAGAAAAGGTTTCCGT+GGG - chr2_3:15529832-15529851 Msa0280680:intron 35.0%
ACGTGATTAATTTCGTTACG+TGG - chr2_3:15530133-15530152 Msa0280680:intron 35.0%
GATTAATTTCGTTACGTGGA+TGG - chr2_3:15530137-15530156 Msa0280680:intron 35.0%
AGAACTCATCAATTCTGATG+TGG - chr2_3:15530324-15530343 Msa0280680:intron 35.0%
TTAGCTCAATTTGCACACTA+TGG + chr2_3:15530496-15530515 None:intergenic 35.0%
ACTTGTCATAGGTGTGATGA+TGG - chr2_3:15524069-15524088 Msa0280680:three_prime_UTR 40.0%
ATGGCACAAAACAACTTCAC+AGG - chr2_3:15524088-15524107 Msa0280680:three_prime_UTR 40.0%
!! CTTGTTGGTTCAGAGATACA+TGG - chr2_3:15524115-15524134 Msa0280680:CDS 40.0%
CATGGATTTCATACCTTGAG+AGG - chr2_3:15524133-15524152 Msa0280680:CDS 40.0%
ATGCATTGTACTACCTCTCA+AGG + chr2_3:15524149-15524168 None:intergenic 40.0%
AGTTGTCGAAGATTTGAGGA+AGG + chr2_3:15524428-15524447 None:intergenic 40.0%
!!! TGGTTGCGTTAGTTTTGTCA+GGG - chr2_3:15524482-15524501 Msa0280680:intron 40.0%
! TTTTGTCAGGGTTTGAACTC+AGG - chr2_3:15524494-15524513 Msa0280680:intron 40.0%
!! CTTAATCGGTTGGTGAGTTA+AGG + chr2_3:15524552-15524571 None:intergenic 40.0%
CTTAACTCACCAACCGATTA+AGG - chr2_3:15524550-15524569 Msa0280680:CDS 40.0%
TTGTAACCGGTACCCTTAAT+CGG + chr2_3:15524566-15524585 None:intergenic 40.0%
AGAATGGCGTGAATCTCATT+CGG + chr2_3:15524920-15524939 None:intergenic 40.0%
GCAAATTCAATGGCTTGACA+TGG + chr2_3:15524967-15524986 None:intergenic 40.0%
CTAACCTGGTGTTTCTTTAG+TGG - chr2_3:15525010-15525029 Msa0280680:CDS 40.0%
GAATCCACTAAAGAAACACC+AGG + chr2_3:15525017-15525036 None:intergenic 40.0%
TATTTGACCGCAAGATGCTT+AGG - chr2_3:15525435-15525454 Msa0280680:intron 40.0%
CTTAGGAACTTCCGAAAAGA+TGG - chr2_3:15525452-15525471 Msa0280680:intron 40.0%
CTCATGAGCACTTAAAAGTG+AGG - chr2_3:15525519-15525538 Msa0280680:intron 40.0%
AACATCTTCGAACAAAGCCT+GGG + chr2_3:15525794-15525813 None:intergenic 40.0%
TAACATCTTCGAACAAAGCC+TGG + chr2_3:15525795-15525814 None:intergenic 40.0%
GTGTTTCACGATAATGAACC+AGG + chr2_3:15526038-15526057 None:intergenic 40.0%
ACCTTTCTTGCTCACTTTAG+AGG - chr2_3:15526343-15526362 Msa0280680:CDS 40.0%
!! TCCTCTAAAGTGAGCAAGAA+AGG + chr2_3:15526347-15526366 None:intergenic 40.0%
! TGCTAACATTCGTTAGGTTG+TGG - chr2_3:15526451-15526470 Msa0280680:CDS 40.0%
GGTGCAGTTGTATCAGAAAT+AGG + chr2_3:15526529-15526548 None:intergenic 40.0%
TTTCTGATACAACTGCACCA+TGG - chr2_3:15526530-15526549 Msa0280680:CDS 40.0%
CTATCAGAAGACTTGGATTC+TGG - chr2_3:15526556-15526575 Msa0280680:CDS 40.0%
! CATTCCCTTTACTGTTTTCG+AGG - chr2_3:15526883-15526902 Msa0280680:CDS 40.0%
CCTACCTCGAAAACAGTAAA+GGG + chr2_3:15526890-15526909 None:intergenic 40.0%
ACCTACCTCGAAAACAGTAA+AGG + chr2_3:15526891-15526910 None:intergenic 40.0%
!! GTTTTCGAGGTAGGTCTTAA+TGG - chr2_3:15526896-15526915 Msa0280680:CDS 40.0%
ACTTGATTGGGATGAACTAG+TGG - chr2_3:15526967-15526986 Msa0280680:CDS 40.0%
ACCCCTACTATACAAAATGG+AGG - chr2_3:15527004-15527023 Msa0280680:CDS 40.0%
! TCTTCTTTATCTGGAGCCAA+TGG - chr2_3:15527035-15527054 Msa0280680:CDS 40.0%
ACATTGTCAAAGCTGCCATT+CGG + chr2_3:15527151-15527170 None:intergenic 40.0%
CAGTTGTACGAGTACAAAGT+CGG + chr2_3:15527249-15527268 None:intergenic 40.0%
! TACGTAGGAATTTCTGAGGA+AGG + chr2_3:15527315-15527334 None:intergenic 40.0%
TCCTCAGAAATTCCTACGTA+TGG - chr2_3:15527315-15527334 Msa0280680:intron 40.0%
ACCATACGTAGGAATTTCTG+AGG + chr2_3:15527319-15527338 None:intergenic 40.0%
GGAGTTAGAATACCATACGT+AGG + chr2_3:15527330-15527349 None:intergenic 40.0%
TTACACACCATGTTCTGTAG+AGG - chr2_3:15527515-15527534 Msa0280680:CDS 40.0%
AATGGATCATGAACAGACGA+AGG + chr2_3:15527564-15527583 None:intergenic 40.0%
! TGATCCATTTTCATCACTGG+TGG - chr2_3:15527575-15527594 Msa0280680:intron 40.0%
!!! GGAAACCTTTGTTTTCTCAG+TGG + chr2_3:15527673-15527692 None:intergenic 40.0%
GCCACAGACACACATTATAT+TGG + chr2_3:15527859-15527878 None:intergenic 40.0%
CCAACCTGAACAATTTCTAC+AGG + chr2_3:15527894-15527913 None:intergenic 40.0%
CCTGTAGAAATTGTTCAGGT+TGG - chr2_3:15527891-15527910 Msa0280680:CDS 40.0%
CAACTTGGCTAATAGGCTTA+TGG + chr2_3:15527983-15528002 None:intergenic 40.0%
CAATGGAAGAGACATACAAC+TGG - chr2_3:15528048-15528067 Msa0280680:intron 40.0%
GAGAAAACATCAAGGGTCTT+CGG + chr2_3:15528122-15528141 None:intergenic 40.0%
TTAGTCTCTTTCAGTGCAGT+AGG + chr2_3:15528158-15528177 None:intergenic 40.0%
! GGTATTTTTCGCTTGCAGAA+AGG + chr2_3:15528258-15528277 None:intergenic 40.0%
ACTACTGAGTATGATGCACA+AGG - chr2_3:15528347-15528366 Msa0280680:intron 40.0%
GTGCAATGTTGGGATATACT+TGG - chr2_3:15528390-15528409 Msa0280680:intron 40.0%
!!! GGGCTATTACTTTGTTTTCG+TGG - chr2_3:15528411-15528430 Msa0280680:intron 40.0%
ATTTCCGCGACAAATTTGGA+TGG - chr2_3:15528450-15528469 Msa0280680:intron 40.0%
CTTCATTGGGCAGCATATAA+TGG - chr2_3:15528479-15528498 Msa0280680:intron 40.0%
GTTTGTTCAAACAAGTGGAG+TGG + chr2_3:15528521-15528540 None:intergenic 40.0%
TAGCAGTGAGAGTGATACTT+AGG + chr2_3:15528602-15528621 None:intergenic 40.0%
CCATACGAAATCCATCAAGT+TGG + chr2_3:15528788-15528807 None:intergenic 40.0%
!! CCAACTTGATGGATTTCGTA+TGG - chr2_3:15528785-15528804 Msa0280680:intron 40.0%
! GATGGATTTCGTATGGTTCA+AGG - chr2_3:15528792-15528811 Msa0280680:intron 40.0%
AAGTATCACACTCTCCTGTT+TGG + chr2_3:15528848-15528867 None:intergenic 40.0%
GTTGGATCTGTCACCAAATT+GGG + chr2_3:15529150-15529169 None:intergenic 40.0%
AGTTGGATCTGTCACCAAAT+TGG + chr2_3:15529151-15529170 None:intergenic 40.0%
TTCAATGACATGAGCTTAGC+TGG - chr2_3:15529270-15529289 Msa0280680:intron 40.0%
AGCTTAGCTGGAAATATCAG+CGG - chr2_3:15529282-15529301 Msa0280680:intron 40.0%
GTAAGGTTCTCAGCATTTAC+TGG + chr2_3:15529333-15529352 None:intergenic 40.0%
AAATGCTGAGAACCTTACAG+AGG - chr2_3:15529335-15529354 Msa0280680:intron 40.0%
AGAGGACCAAGTGTACTTAA+AGG - chr2_3:15529353-15529372 Msa0280680:intron 40.0%
TCTTGTCTCAAAGTTGCGAA+AGG + chr2_3:15529535-15529554 None:intergenic 40.0%
!! CTTTGAGACAAGAAAAGCGA+TGG - chr2_3:15529542-15529561 Msa0280680:CDS 40.0%
CGTAAGATTCTATGGTCTGT+TGG - chr2_3:15529777-15529796 Msa0280680:intron 40.0%
TTGAGAAAGTAATCCTGCGT+TGG - chr2_3:15529805-15529824 Msa0280680:intron 40.0%
! TTCTCTTTAAAAGCCAACGC+AGG + chr2_3:15529821-15529840 None:intergenic 40.0%
!! GAAGAGGACTTCTTTAAGAC+TGG - chr2_3:15529909-15529928 Msa0280680:intron 40.0%
!! AGGACTTCTTTAAGACTGGT+AGG - chr2_3:15529913-15529932 Msa0280680:intron 40.0%
TAAGACTGGTAGGAAACAAG+CGG - chr2_3:15529923-15529942 Msa0280680:intron 40.0%
CTTGTTGCGCTTTCTTAGAA+CGG + chr2_3:15529992-15530011 None:intergenic 40.0%
AGAGTATAGCAGGATGAAGA+TGG - chr2_3:15530010-15530029 Msa0280680:intron 40.0%
GTAGAATTGCTTTGTGCAGT+TGG - chr2_3:15530288-15530307 Msa0280680:intron 40.0%
! AGATGTTTGGTGGATGTTTC+TGG - chr2_3:15530579-15530598 Msa0280680:intron 40.0%
! AGAAGAGGGTCTGTTCTGAA+TGG + chr2_3:15523830-15523849 None:intergenic 45.0%
AACTTCACAGGACAGCTTGT+TGG - chr2_3:15524100-15524119 Msa0280680:exon 45.0%
!!! GTGGTTGCGTTAGTTTTGTC+AGG - chr2_3:15524481-15524500 Msa0280680:intron 45.0%
TATGACTCAGACCTGGATGT+TGG - chr2_3:15524857-15524876 Msa0280680:CDS 45.0%
!!! TCTGCTTTTTGCTTCCTCCA+AGG + chr2_3:15524888-15524907 None:intergenic 45.0%
TGGAGGAAGCAAAAAGCAGA+TGG - chr2_3:15524888-15524907 Msa0280680:CDS 45.0%
GGAAGTTCCTAAGCATCTTG+CGG + chr2_3:15525445-15525464 None:intergenic 45.0%
! TCCAGTTGTGCCCATCTTTT+CGG + chr2_3:15525466-15525485 None:intergenic 45.0%
GAACAAAGCCTGGGTTATCT+TGG + chr2_3:15525785-15525804 None:intergenic 45.0%
!! TGGGCTTGCTAACATTCGTT+AGG - chr2_3:15526445-15526464 Msa0280680:CDS 45.0%
ACCAGCAGTGCTTATACGAA+TGG - chr2_3:15526580-15526599 Msa0280680:CDS 45.0%
! ACCATTCGTATAAGCACTGC+TGG + chr2_3:15526584-15526603 None:intergenic 45.0%
!! CCCTTTACTGTTTTCGAGGT+AGG - chr2_3:15526887-15526906 Msa0280680:CDS 45.0%
GTTCTTTCCGAACAAGCCAT+TGG + chr2_3:15527054-15527073 None:intergenic 45.0%
!! GTCAGAATAGCTTTGGAACG+TGG - chr2_3:15527475-15527494 Msa0280680:CDS 45.0%
! TCCATTTTCATCACTGGTGG+TGG - chr2_3:15527578-15527597 Msa0280680:intron 45.0%
TCCACCACCAGTGATGAAAA+TGG + chr2_3:15527582-15527601 None:intergenic 45.0%
AGTGGAAGAAACCCATGAAG+GGG + chr2_3:15527655-15527674 None:intergenic 45.0%
CAGTGGAAGAAACCCATGAA+GGG + chr2_3:15527656-15527675 None:intergenic 45.0%
TCAGTGGAAGAAACCCATGA+AGG + chr2_3:15527657-15527676 None:intergenic 45.0%
CAGGACCTGCAAGAAGTAAA+GGG + chr2_3:15527793-15527812 None:intergenic 45.0%
TTCACGAATCCAGGAGAATG+CGG + chr2_3:15527939-15527958 None:intergenic 45.0%
! TTTTTCGCTTGCAGAAAGGG+AGG + chr2_3:15528254-15528273 None:intergenic 45.0%
! CAAACTCAGGGAATGGCTTT+TGG - chr2_3:15528301-15528320 Msa0280680:intron 45.0%
CTGGATTTCCGCGACAAATT+TGG - chr2_3:15528446-15528465 Msa0280680:CDS 45.0%
CTGTCCATCCAAATTTGTCG+CGG + chr2_3:15528457-15528476 None:intergenic 45.0%
TTGGATGGACAGCTCTTCAT+TGG - chr2_3:15528465-15528484 Msa0280680:intron 45.0%
TGGATGGACAGCTCTTCATT+GGG - chr2_3:15528466-15528485 Msa0280680:intron 45.0%
GTTGCTACGTTGTTGTCTTG+TGG - chr2_3:15529117-15529136 Msa0280680:intron 45.0%
TTGTGGAGCAAAGCCCAATT+TGG - chr2_3:15529134-15529153 Msa0280680:intron 45.0%
CTGGATCAGTTGTAGTGGTT+TGG + chr2_3:15529314-15529333 None:intergenic 45.0%
AGTACACTTGGTCCTCTGTA+AGG + chr2_3:15529350-15529369 None:intergenic 45.0%
AGGATACATTGGCAGCTTAC+CGG - chr2_3:15529373-15529392 Msa0280680:intron 45.0%
ACGCATACAAGCAGCGTTTA+GGG - chr2_3:15529416-15529435 Msa0280680:intron 45.0%
TCCAGTACAGATTCCGTTCA+TGG - chr2_3:15529580-15529599 Msa0280680:CDS 45.0%
TCCATGAACGGAATCTGTAC+TGG + chr2_3:15529584-15529603 None:intergenic 45.0%
CTCTACGCAACTTCCATGAA+CGG + chr2_3:15529596-15529615 None:intergenic 45.0%
! TTAGAGGCTTTCAAGTGCGT+AGG - chr2_3:15529748-15529767 Msa0280680:intron 45.0%
TCGTCTTTCATGTCTTCGTC+CGG + chr2_3:15529870-15529889 None:intergenic 45.0%
AGACATGAAAGACGAGAAGC+AGG - chr2_3:15529875-15529894 Msa0280680:intron 45.0%
CGCTTTCTTAGAACGGAACA+TGG + chr2_3:15529985-15530004 None:intergenic 45.0%
! AAGCGCAACAAGAGTATAGC+AGG - chr2_3:15530000-15530019 Msa0280680:intron 45.0%
GATGGCACATAGTCAAGCAA+AGG - chr2_3:15530028-15530047 Msa0280680:intron 45.0%
!!! ATTTATTTTTATTTTTTTTG+TGG - chr2_3:15524261-15524280 Msa0280680:intron 5.0%
!!! TATTATTTTTATAAACTTTA+GGG + chr2_3:15528631-15528650 None:intergenic 5.0%
!!! TTATTATTTTTATAAACTTT+AGG + chr2_3:15528632-15528651 None:intergenic 5.0%
! CACCAACCGATTAAGGGTAC+CGG - chr2_3:15524557-15524576 Msa0280680:CDS 50.0%
AACCGGTACCCTTAATCGGT+TGG + chr2_3:15524562-15524581 None:intergenic 50.0%
TCCGAAAAGATGGGCACAAC+TGG - chr2_3:15525462-15525481 Msa0280680:intron 50.0%
GGCCGTGTGCATAATATACG+TGG + chr2_3:15525764-15525783 None:intergenic 50.0%
!! TCTGGAGCCAATGGCTTGTT+CGG - chr2_3:15527044-15527063 Msa0280680:CDS 50.0%
ATTCTAACTCCGCCAGAGTC+TGG - chr2_3:15527339-15527358 Msa0280680:CDS 50.0%
TTCTAACTCCGCCAGAGTCT+GGG - chr2_3:15527340-15527359 Msa0280680:CDS 50.0%
ACATTACTGCTCCCAGACTC+TGG + chr2_3:15527354-15527373 None:intergenic 50.0%
GTTGACGCCTCTACAGAACA+TGG + chr2_3:15527525-15527544 None:intergenic 50.0%
CATGGCCCTTTACTTCTTGC+AGG - chr2_3:15527785-15527804 Msa0280680:intron 50.0%
CCAGGACCTGCAAGAAGTAA+AGG + chr2_3:15527794-15527813 None:intergenic 50.0%
CCTTTACTTCTTGCAGGTCC+TGG - chr2_3:15527791-15527810 Msa0280680:intron 50.0%
TTCTTGCAGGTCCTGGTAAC+TGG - chr2_3:15527798-15527817 Msa0280680:intron 50.0%
AGGTTGGAGTTTACCGATGC+TGG - chr2_3:15527907-15527926 Msa0280680:CDS 50.0%
GGTTGGAGTTTACCGATGCT+GGG - chr2_3:15527908-15527927 Msa0280680:CDS 50.0%
AATGCGGCAATACCCAGCAT+CGG + chr2_3:15527923-15527942 None:intergenic 50.0%
! CACTCCGATTTTGCACGATC+CGG - chr2_3:15528019-15528038 Msa0280680:intron 50.0%
GTCTCTTCCATTGAAGCAGC+CGG + chr2_3:15528041-15528060 None:intergenic 50.0%
GATCCAACTACCGAATACCC+TGG - chr2_3:15529162-15529181 Msa0280680:intron 50.0%
! AGTACAGCCACCAGGGTATT+CGG + chr2_3:15529175-15529194 None:intergenic 50.0%
CACGCATACAAGCAGCGTTT+AGG - chr2_3:15529415-15529434 Msa0280680:intron 50.0%
TAATAGCCTGACGTCGCATG+TGG + chr2_3:15529626-15529645 None:intergenic 50.0%
TCGATGCAGGCTGCATTTAG+AGG - chr2_3:15529732-15529751 Msa0280680:intron 50.0%
AAAAGGTTTCCGTGGGCTTG+AGG - chr2_3:15529839-15529858 Msa0280680:intron 50.0%
GCAGGAAAGCGATGTAGAAG+AGG - chr2_3:15529893-15529912 Msa0280680:intron 50.0%
AGAACGCGTTGAGAGATCTG+TGG - chr2_3:15529947-15529966 Msa0280680:intron 50.0%
CCAAGGTTTCGCCAACATCC+AGG + chr2_3:15524871-15524890 None:intergenic 55.0%
CCTGGATGTTGGCGAAACCT+TGG - chr2_3:15524868-15524887 Msa0280680:CDS 55.0%
GGATGTTGGCGAAACCTTGG+AGG - chr2_3:15524871-15524890 Msa0280680:CDS 55.0%
! GTGTCTGGAGCACATAGTCC+TGG - chr2_3:15526017-15526036 Msa0280680:CDS 55.0%
TTACTGCTCCCAGACTCTGG+CGG + chr2_3:15527351-15527370 None:intergenic 55.0%
TTACTGAGGTGGCCCCTTCA+TGG - chr2_3:15527640-15527659 Msa0280680:intron 55.0%
TACTGAGGTGGCCCCTTCAT+GGG - chr2_3:15527641-15527660 Msa0280680:intron 55.0%
! TGGGTATTGCCGCATTCTCC+TGG - chr2_3:15527927-15527946 Msa0280680:CDS 55.0%
GCAGCCGGATCGTGCAAAAT+CGG + chr2_3:15528026-15528045 None:intergenic 55.0%
! CCACCAGGGTATTCGGTAGT+TGG + chr2_3:15529168-15529187 None:intergenic 55.0%
CCAACTACCGAATACCCTGG+TGG - chr2_3:15529165-15529184 Msa0280680:intron 55.0%
! TTGTATGCGTGCTGCTGCCT+CGG + chr2_3:15529406-15529425 None:intergenic 55.0%
TCTGTACTGGATCCGAGCAG+CGG + chr2_3:15529571-15529590 None:intergenic 55.0%
GTTTCTCCACATGCGACGTC+AGG - chr2_3:15529617-15529636 Msa0280680:intron 55.0%
GCACACGGCCAAGATAACCC+AGG - chr2_3:15525774-15525793 Msa0280680:intron 60.0%
GCACGATCCGGCTGCTTCAA+TGG - chr2_3:15528031-15528050 Msa0280680:intron 60.0%
TTCGTGGTCAGGCTTGTCGC+TGG - chr2_3:15528427-15528446 Msa0280680:CDS 60.0%
CAGCAGCAGTACAGCCACCA+GGG + chr2_3:15529182-15529201 None:intergenic 60.0%
TCAGCAGCAGTACAGCCACC+AGG + chr2_3:15529183-15529202 None:intergenic 60.0%
AGCTTACCGGACAACAGCCG+AGG - chr2_3:15529386-15529405 Msa0280680:intron 60.0%
ATCTGGCGTGCTTCCTCCTC+TGG + chr2_3:15529486-15529505 None:intergenic 60.0%
CCGGATTCACCTCAAGCCCA+CGG + chr2_3:15529851-15529870 None:intergenic 60.0%
CCGTGGGCTTGAGGTGAATC+CGG - chr2_3:15529848-15529867 Msa0280680:intron 60.0%
CTGCTGCCTCGGCTGTTGTC+CGG + chr2_3:15529395-15529414 None:intergenic 65.0%
AAGCGATGGCAGCCGCTGCT+CGG - chr2_3:15529556-15529575 Msa0280680:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 15523768 15530717 15523768 ID=Msa0280680;Name=Msa0280680
chr2_3 mRNA 15523768 15530717 15523768 ID=Msa0280680-mRNA-1;Parent=Msa0280680;Name=Msa0280680-mRNA-1;_AED=0.08;_eAED=0.08;_QI=151|0.92|0.92|1|0.92|0.85|14|345|888
chr2_3 exon 15523768 15524178 15523768 ID=Msa0280680-mRNA-1:exon:6509;Parent=Msa0280680-mRNA-1
chr2_3 exon 15524517 15524744 15524517 ID=Msa0280680-mRNA-1:exon:6508;Parent=Msa0280680-mRNA-1
chr2_3 exon 15524832 15525378 15524832 ID=Msa0280680-mRNA-1:exon:6507;Parent=Msa0280680-mRNA-1
chr2_3 exon 15525981 15526678 15525981 ID=Msa0280680-mRNA-1:exon:6506;Parent=Msa0280680-mRNA-1
chr2_3 exon 15526799 15527185 15526799 ID=Msa0280680-mRNA-1:exon:6505;Parent=Msa0280680-mRNA-1
chr2_3 exon 15527317 15527375 15527317 ID=Msa0280680-mRNA-1:exon:6504;Parent=Msa0280680-mRNA-1
chr2_3 exon 15527460 15527576 15527460 ID=Msa0280680-mRNA-1:exon:6503;Parent=Msa0280680-mRNA-1
chr2_3 exon 15527884 15528001 15527884 ID=Msa0280680-mRNA-1:exon:6502;Parent=Msa0280680-mRNA-1
chr2_3 exon 15528423 15528468 15528423 ID=Msa0280680-mRNA-1:exon:6501;Parent=Msa0280680-mRNA-1
chr2_3 exon 15528656 15528744 15528656 ID=Msa0280680-mRNA-1:exon:6500;Parent=Msa0280680-mRNA-1
chr2_3 exon 15528950 15529065 15528950 ID=Msa0280680-mRNA-1:exon:6499;Parent=Msa0280680-mRNA-1
chr2_3 exon 15529493 15529618 15529493 ID=Msa0280680-mRNA-1:exon:6498;Parent=Msa0280680-mRNA-1
chr2_3 exon 15530331 15530459 15530331 ID=Msa0280680-mRNA-1:exon:6497;Parent=Msa0280680-mRNA-1
chr2_3 exon 15530626 15530717 15530626 ID=Msa0280680-mRNA-1:exon:6496;Parent=Msa0280680-mRNA-1
chr2_3 five_prime_UTR 15530626 15530717 15530626 ID=Msa0280680-mRNA-1:five_prime_utr;Parent=Msa0280680-mRNA-1
chr2_3 five_prime_UTR 15530401 15530459 15530401 ID=Msa0280680-mRNA-1:five_prime_utr;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15530331 15530400 15530331 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15529493 15529618 15529493 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15528950 15529065 15528950 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15528656 15528744 15528656 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15528423 15528468 15528423 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15527884 15528001 15527884 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15527460 15527576 15527460 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15527317 15527375 15527317 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15526799 15527185 15526799 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15525981 15526678 15525981 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15524832 15525378 15524832 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15524517 15524744 15524517 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 CDS 15524113 15524178 15524113 ID=Msa0280680-mRNA-1:cds;Parent=Msa0280680-mRNA-1
chr2_3 three_prime_UTR 15523768 15524112 15523768 ID=Msa0280680-mRNA-1:three_prime_utr;Parent=Msa0280680-mRNA-1
Gene Sequence

>Msa0280680

ATGATGGCACAAAACAACTTCACAGGACAGCTTGTTGGTTCAGAGATACATGGATTTCATACCTTGAGAGACCTGGATGTTGGCGAAACCTTGGAGGAAGCAAAAAGCAGATGGCTTCGTCCGAATGAGATTCACGCCATTCTCAGCAATTACAAATATTTTACTATCCATGTCAAGCCATTGAATTTGCCCAAAAGTGGTACTGTTGTACTATTTGACCGCAAGATGCTTAGGAACTTCCGAAAAGATGGGCACAACTGGAAAAAGAAAAATGACGGGAAAACTGTTAAAGAAGCTCATGAGCACTTAAAAGTTGGTAATGAAGAGAGAATCCACGTATATTATGCACACGGCCAAGATAACCCAGGCTTTGTTCGAAGATGTTATTGGTTGCTTGATAAGTGTCTGGAGCACATAGTCCTGGTTCATTATCGTGAAACACAAGAGTCTCAAAGTTCTCCCGTTACACCATTAAATTCAAATGTGAGTCCTATTTCTGATACAACTGCACCATGGATTCTATCAGAAGACTTGGATTCTGGAACCAGCAGTGCTTATACGAATGGTCTTAATGGAAATTTAACAGTCAGAAGTCATGAACAGAAGCTTCATGAGCTTAATACACTTGATTGGGATGAACTAGTGGCTTCGAATGTTAATACCCCTACTATACAAAATGGAGGAAACGAACCGCGTTACTATCAACTAAATCAAAGCTTACCGAATGGCAGCTTTGACAATGTTGCTGGTAATCCTTCCTCAGAAATTCCTACGTATGGTATTCTAACTCCGCCAGAGTCTGGGAGCAGTAATGTTTCTTACTGTTTCCCAGAAAGTGTTAACGATCAAAAGAATCATTCTATAAATCTTGGTGGTGTTGATTCCGTTGACATTTTAGTCAATGAAGGTTTGCAAAGTCAGAATAGCTTTGGAACGTGGATGAACAATGCCATATCTTACACACCATGTTCTGTAGAGGCGTCAACTCTTGAATCGTCAATTCCTTCGTCTGTTCATGATCCATTTTCATCACTGGTGGTGGATAATCAACAATCTTCTCTTCCGGAACAAGTATTTCATATTACTGAGGTGGCCCCTTCATGGGTTTCTTCCACTGAGAAAACAAAGGTCCTGGTAACTGGATATTTTCTCTTTGATTATCAACACCTTGCAAAGTCCAATATAATGTGTGTCTGTGGCGAAACAAGTGTTCCTGTAGAAATTGTTCAGGTTGGAGTTTACCGATGCTGGGTATTGCCGCATTCTCCTGGATTCGTGAATCTCTATTTGAGCTTCGATGGCCATAAGCCTATTAGCCAAGTTGTTAATTTTGAATATCGCACTCCGATTTTGCACGATCCGGCTGCTTCAATGGAAGAGACATACAACTGGGTTGAATTTCGTCTTCAAATGAGGCTTTCTCATTTGCTTTTTACAACACCGAAGACCCTTGATGTTTTCTCTAGTGAAGCATCACCTACTGCACTGAAAGAGACTAAAAAATTCGCCTCCAAAACATTATTTCTTTCCAAAAGTTTTATACACTTCATGAAGTCGTCTGACGCAAACGCACCTCCCTTTCTGCAAGCGAAAAATACCTTGTTCGAAATTGCGTTGAAAAACAAACTCAGGGAATGGCTTTTGGAACGTATTGTTTTAGGATGTAAGACTACTGAGTATGATGCACAAGGCCAAAGTGTAATTCATTTGTGTGCAATGTTGGGATATACTTGGGCTATTACTTTGTTTTCGTGGTCAGGCTTGTCGCTGGATTTCCGCGACAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATAATGGAATGGAGAATATGGTTGCTACGTTGTTGTCTTGTGGAGCAAAGCCCAATTTGGTGACAGATCCAACTACCGAATACCCTGGTGGCTGTACTGCTGCTGATCTTGCTTATATGAAAGGATATGACGGTTTAGCTGCTTATCTTTCAGAAAAGTGTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGCGGTTCACTCCAAACCACTACAACTGATCCAGTAAATGCTGAGAACCTTACAGAGGACCAAGTGTACTTAAAGGATACATTGGCAGCTTACCGGACAACAGCCGAGGCAGCAGCACGCATACAAGCAGCGTTTAGGGAGCACTCACTAAAATTGCGATATCAGTCGGTTCAATTTATTAGTCCAGAGGAGGAAGCACGCCAGATAGTAGCAGCAATGAAAATTCAACATGCCTTTCGCAACTTTGAGACAAGAAAAGCGATGGCAGCCGCTGCTCGGATCCAGTACAGATTCCGTTCATGGAAGTTGCGTAGAGAGTTTCTCCACATGCGACGTCAGGCTATTAGAATTCAAGCTGCATTTAGAGGCTTTCAAGTGCGTAGGCAATATCGTAAGATTCTATGGTCTGTTGGAATTCTTGAGAAAGTAATCCTGCGTTGGCTTTTAAAGAGAAAAGGTTTCCGTGGGCTTGAGGTGAATCCGGACGAAGACATGAAAGACGAGAAGCAGGAAAGCGATGTAGAAGAGGACTTCTTTAAGACTGGTAGGAAACAAGCGGAAGAACGCGTTGAGAGATCTGTGTTGGAACTTGAATTAGAAGAACTCATCAATTCTGATGTGGACATGTTCACAACAAAGACATCATAA
Protein sequence

>Msa0280680

MMAQNNFTGQLVGSEIHGFHTLRDLDVGETLEEAKSRWLRPNEIHAILSNYKYFTIHVKPLNLPKSGTVVLFDRKMLRNFRKDGHNWKKKNDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPGFVRRCYWLLDKCLEHIVLVHYRETQESQSSPVTPLNSNVSPISDTTAPWILSEDLDSGTSSAYTNGLNGNLTVRSHEQKLHELNTLDWDELVASNVNTPTIQNGGNEPRYYQLNQSLPNGSFDNVAGNPSSEIPTYGILTPPESGSSNVSYCFPESVNDQKNHSINLGGVDSVDILVNEGLQSQNSFGTWMNNAISYTPCSVEASTLESSIPSSVHDPFSSLVVDNQQSSLPEQVFHITEVAPSWVSSTEKTKVLVTGYFLFDYQHLAKSNIMCVCGETSVPVEIVQVGVYRCWVLPHSPGFVNLYLSFDGHKPISQVVNFEYRTPILHDPAASMEETYNWVEFRLQMRLSHLLFTTPKTLDVFSSEASPTALKETKKFASKTLFLSKSFIHFMKSSDANAPPFLQAKNTLFEIALKNKLREWLLERIVLGCKTTEYDAQGQSVIHLCAMLGYTWAITLFSWSGLSLDFRDKFGWTALHWAAYNGMENMVATLLSCGAKPNLVTDPTTEYPGGCTAADLAYMKGYDGLAAYLSEKCLVEQFNDMSLAGNISGSLQTTTTDPVNAENLTEDQVYLKDTLAAYRTTAEAAARIQAAFREHSLKLRYQSVQFISPEEEARQIVAAMKIQHAFRNFETRKAMAAAARIQYRFRSWKLRREFLHMRRQAIRIQAAFRGFQVRRQYRKILWSVGILEKVILRWLLKRKGFRGLEVNPDEDMKDEKQESDVEEDFFKTGRKQAEERVERSVLELELEELINSDVDMFTTKTS*