Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0280770 | XP_039684481.1 | 60.839 | 143 | 47 | 3 | 343 | 478 | 140 | 280 | 7.16e-37 | 148 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0280770 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0280770 | MtrunA17_Chr5g0430431 | 29.960 | 247 | 153 | 4 | 1 | 239 | 20 | 254 | 9.23e-22 | 94.7 |
| Msa0280770 | MtrunA17_Chr2g0309121 | 35.802 | 81 | 51 | 1 | 162 | 242 | 39 | 118 | 1.09e-13 | 67.8 |
| Msa0280770 | MtrunA17_Chr2g0281511 | 33.333 | 81 | 54 | 0 | 162 | 242 | 39 | 119 | 3.13e-13 | 66.2 |
| Msa0280770 | MtrunA17_Chr6g0459981 | 31.579 | 133 | 80 | 4 | 109 | 235 | 24 | 151 | 2.67e-12 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 112 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCGAACTTCTATGAATT+TGG | 0.054553 | 2_3:-15681628 | Msa0280770:CDS |
| TTAACAAGCAAGGATTTATT+AGG | 0.154576 | 2_3:-15684419 | Msa0280770:CDS |
| TCCACATTGTTGGCAACTTC+TGG | 0.229172 | 2_3:+15684222 | None:intergenic |
| GCTATGGCTCGGTCTGTTTA+TGG | 0.249815 | 2_3:-15684039 | Msa0280770:CDS |
| TAATCAAGAAAACATCATTT+TGG | 0.250164 | 2_3:-15680167 | Msa0280770:CDS |
| GCCTTAATTGCTGGATTGTT+TGG | 0.262234 | 2_3:-15684327 | Msa0280770:CDS |
| GCCAAACAATCCAGCAATTA+AGG | 0.272470 | 2_3:+15684326 | None:intergenic |
| GATTGTTATCCGTCTTGATA+TGG | 0.282981 | 2_3:-15684379 | Msa0280770:CDS |
| ACCAAGATCATCCACTTTCT+TGG | 0.288727 | 2_3:+15683555 | None:intergenic |
| GGAAATCTTTGCGAGGTTAT+TGG | 0.300169 | 2_3:+15680559 | None:intergenic |
| CTTCTTGCTCACCTTCATCT+TGG | 0.309395 | 2_3:+15684100 | None:intergenic |
| ATAGAAAGCTGACTTCTAAA+AGG | 0.326124 | 2_3:+15681195 | None:intergenic |
| GTAGAGTGTCTTGATTTCTT+AGG | 0.326477 | 2_3:+15684445 | None:intergenic |
| TCTCGAACTTCTATGAATTT+GGG | 0.333347 | 2_3:-15681627 | Msa0280770:intron |
| TAACAAGCAAGGATTTATTA+GGG | 0.339019 | 2_3:-15684418 | Msa0280770:CDS |
| CCCTCCTACAGCATTGTTTG+TGG | 0.371272 | 2_3:-15683385 | Msa0280770:CDS |
| ACAGTTTCATCGACACCAAC+TGG | 0.380151 | 2_3:-15681509 | Msa0280770:intron |
| AACATTGAATGTTTATCTTC+TGG | 0.381096 | 2_3:-15680520 | Msa0280770:CDS |
| CTGACTTCTAAAAGGCTCAT+TGG | 0.388118 | 2_3:+15681203 | None:intergenic |
| TACAGCATTGTTTGTGGATG+TGG | 0.395716 | 2_3:-15683379 | Msa0280770:intron |
| AAGAATGGTGCCTTAATTGC+TGG | 0.403091 | 2_3:-15684336 | Msa0280770:CDS |
| TAAGCTTGTCACCCTCTTGT+AGG | 0.407804 | 2_3:+15683424 | None:intergenic |
| TAATATCAATGACTTCTTGA+TGG | 0.414621 | 2_3:+15684136 | None:intergenic |
| TCTATAGTTGACAATGCTTC+AGG | 0.415714 | 2_3:+15681708 | None:intergenic |
| GTGGATGATCTTGGTTGATC+TGG | 0.419207 | 2_3:-15683547 | Msa0280770:CDS |
| ATCATATATATCTACTTTGA+AGG | 0.426283 | 2_3:+15680141 | None:intergenic |
| TATGATGATGCTGAGATCAT+AGG | 0.428270 | 2_3:-15680124 | None:intergenic |
| GAAGTTATGATCCCACCTTT+TGG | 0.432229 | 2_3:-15683198 | Msa0280770:intron |
| TTGCACTAACTCCACATTGT+TGG | 0.434351 | 2_3:+15684212 | None:intergenic |
| GCAATTTGTTTCTGCTGCTA+TGG | 0.435657 | 2_3:-15684055 | Msa0280770:CDS |
| TCCGTTCAGTCGTGTTTAGC+CGG | 0.450558 | 2_3:+15683502 | None:intergenic |
| TTGATTGATGAGTTTGATGA+TGG | 0.455219 | 2_3:+15680263 | None:intergenic |
| AACAAATTGCTCAAAGCGAT+GGG | 0.455874 | 2_3:+15684068 | None:intergenic |
| GTTCGAGAAGGATTATTTGT+TGG | 0.456456 | 2_3:+15681642 | None:intergenic |
| ATGTTGGTAACGTTGGATAG+TGG | 0.457005 | 2_3:+15680538 | None:intergenic |
| CAGCTTTCTATATTGATGAA+TGG | 0.466971 | 2_3:-15681183 | Msa0280770:intron |
| TGACAAGCTTATCTTTGAGT+TGG | 0.470099 | 2_3:-15683412 | Msa0280770:CDS |
| TTGTTTCTGCTGCTATGGCT+CGG | 0.476505 | 2_3:-15684050 | Msa0280770:CDS |
| ATGTTGGTAACGTCGGATAG+TGG | 0.476907 | 2_3:+15681425 | None:intergenic |
| CTTGCGAAATTCGAATATCT+AGG | 0.495048 | 2_3:-15684288 | Msa0280770:CDS |
| ATCTCTCTAGAAACACGATT+GGG | 0.496000 | 2_3:+15683588 | None:intergenic |
| ACAGTGTTACATACCTCTGC+CGG | 0.500194 | 2_3:+15684557 | None:intergenic |
| GCTAATTCATCTATGAATCA+AGG | 0.501755 | 2_3:-15681237 | Msa0280770:CDS |
| CGTCTTGATATGGATGACTC+TGG | 0.502279 | 2_3:-15684369 | Msa0280770:CDS |
| TGGAGGTTGAGAAAGAATAT+AGG | 0.505564 | 2_3:-15683527 | Msa0280770:CDS |
| TCATCAAACTCATCAATCAA+TGG | 0.511922 | 2_3:-15680260 | Msa0280770:intron |
| ACAACCTCCTGCGCGACTTG+TGG | 0.513014 | 2_3:+15684174 | None:intergenic |
| AATATCAATGACTTCTTGAT+GGG | 0.513294 | 2_3:+15684137 | None:intergenic |
| GGTAACAATGAACATGTTCA+AGG | 0.514845 | 2_3:+15684263 | None:intergenic |
| TTAGATGCATTTAGTGCTTG+AGG | 0.514907 | 2_3:+15680380 | None:intergenic |
| ATTAGGGATCACGATGGCGG+AGG | 0.518365 | 2_3:-15684402 | Msa0280770:CDS |
| TTCGAGTCAGTACTTGAAGA+AGG | 0.523077 | 2_3:-15680290 | Msa0280770:CDS |
| AGAAGATAAACATTCAATGT+TGG | 0.524294 | 2_3:+15681409 | None:intergenic |
| AAACAAATTGCTCAAAGCGA+TGG | 0.534232 | 2_3:+15684067 | None:intergenic |
| AGCACTAAATGCATCTAAGA+AGG | 0.540991 | 2_3:-15680375 | Msa0280770:CDS |
| CTGGATCAAGTTTGTACAAG+AGG | 0.542431 | 2_3:-15681490 | Msa0280770:CDS |
| TTAGGGATCACGATGGCGGA+GGG | 0.544981 | 2_3:-15684401 | Msa0280770:CDS |
| GTGGATCAAGTTTGTACAAG+AGG | 0.545379 | 2_3:-15680603 | Msa0280770:CDS |
| ACATTCAATGTTGGTAACGT+TGG | 0.545436 | 2_3:+15680531 | None:intergenic |
| AAACTAGAATTAATTGGAGA+AGG | 0.546462 | 2_3:-15680346 | Msa0280770:CDS |
| TCTGGATTAGCATCAGCCAT+GGG | 0.547568 | 2_3:+15684240 | None:intergenic |
| TCAACTATAGAGCAGGCAAA+TGG | 0.550507 | 2_3:-15681696 | Msa0280770:CDS |
| TATTGACTGTGCCAAGAAAG+TGG | 0.556740 | 2_3:-15683566 | Msa0280770:CDS |
| GCCAAGAAAGTGGATGATCT+TGG | 0.556882 | 2_3:-15683556 | Msa0280770:CDS |
| TTTCGTAAGCATGGTGAACC+CGG | 0.556913 | 2_3:-15684576 | None:intergenic |
| TTCTTAGGAGAAAGTACCTG+TGG | 0.560267 | 2_3:-15684481 | Msa0280770:intron |
| TATCTCTCTAGAAACACGAT+TGG | 0.561687 | 2_3:+15683587 | None:intergenic |
| AGCATTGTCAACTATAGAGC+AGG | 0.562358 | 2_3:-15681703 | Msa0280770:CDS |
| TTCTGGATTAGCATCAGCCA+TGG | 0.566437 | 2_3:+15684239 | None:intergenic |
| AGAAGATAAACATTCAATGT+TGG | 0.566912 | 2_3:+15680522 | None:intergenic |
| TCCACAAACAATGCTGTAGG+AGG | 0.567363 | 2_3:+15683384 | None:intergenic |
| TCTGGAATTTCAATGAAGAA+TGG | 0.568291 | 2_3:-15684351 | Msa0280770:CDS |
| AAACACGACTGAACGGAACA+AGG | 0.570782 | 2_3:-15683496 | Msa0280770:CDS |
| TCAGATGAAGACCAAGATGA+AGG | 0.574883 | 2_3:-15684111 | Msa0280770:CDS |
| TTGAGAAAGAATATAGGTGC+CGG | 0.576447 | 2_3:-15683521 | Msa0280770:CDS |
| ACAGTTTCATCGACACCAAG+TGG | 0.585021 | 2_3:-15680622 | Msa0280770:intron |
| AAGCATGGTGAACCCGGCAG+AGG | 0.586095 | 2_3:-15684570 | None:intergenic |
| TGAAAATCCACAAGTCGCGC+AGG | 0.590768 | 2_3:-15684181 | Msa0280770:CDS |
| GATGATCTTGGTTGATCTGG+AGG | 0.594823 | 2_3:-15683544 | Msa0280770:CDS |
| AGATGAAGGTGAGCAAGAAG+AGG | 0.595301 | 2_3:-15684097 | Msa0280770:CDS |
| CAAATTGCTCAAAGCGATGG+GGG | 0.595451 | 2_3:+15684070 | None:intergenic |
| TATTCGAATTTCGCAAGAGT+AGG | 0.596636 | 2_3:+15684294 | None:intergenic |
| CAGTGTTACATACCTCTGCC+GGG | 0.597890 | 2_3:+15684558 | None:intergenic |
| TACATTACATACCAAAAGGT+GGG | 0.597915 | 2_3:+15683187 | None:intergenic |
| ACTCTACAAATTAACAAGCA+AGG | 0.598382 | 2_3:-15684429 | Msa0280770:CDS |
| AGGTAGAATTGAAAATCCAC+AGG | 0.601572 | 2_3:+15684465 | None:intergenic |
| GTCTGTTTATGGACAACCAA+TGG | 0.604681 | 2_3:-15684028 | Msa0280770:intron |
| GCCGGCTAAACACGACTGAA+CGG | 0.605106 | 2_3:-15683503 | Msa0280770:CDS |
| TGTCACCCTCTTGTAGGCGA+CGG | 0.606670 | 2_3:+15683430 | None:intergenic |
| ATCAAGTTTGTACAAGAGGA+AGG | 0.606882 | 2_3:-15681486 | Msa0280770:CDS |
| ACATTCAATGTTGGTAACGT+CGG | 0.615162 | 2_3:+15681418 | None:intergenic |
| ATCAAGTTTGTACAAGAGGA+AGG | 0.615811 | 2_3:-15680599 | Msa0280770:CDS |
| ATACATTACATACCAAAAGG+TGG | 0.618408 | 2_3:+15683186 | None:intergenic |
| CAAAGACCGTCGCCTACAAG+AGG | 0.619952 | 2_3:-15683436 | Msa0280770:CDS |
| ACATCCACAAACAATGCTGT+AGG | 0.623174 | 2_3:+15683381 | None:intergenic |
| GTAACAATGAACATGTTCAA+GGG | 0.625828 | 2_3:+15684264 | None:intergenic |
| AAATCCACAAGTCGCGCAGG+AGG | 0.634892 | 2_3:-15684178 | Msa0280770:CDS |
| TTTATTAGGGATCACGATGG+CGG | 0.638629 | 2_3:-15684405 | Msa0280770:CDS |
| TTGTACAAACTTGATCCAGT+TGG | 0.640678 | 2_3:+15681494 | None:intergenic |
| AACACGACTGAACGGAACAA+GGG | 0.646184 | 2_3:-15683495 | Msa0280770:CDS |
| CAGAGTCATCCATATCAAGA+CGG | 0.651142 | 2_3:+15684370 | None:intergenic |
| CTGGATTAGCATCAGCCATG+GGG | 0.653003 | 2_3:+15684241 | None:intergenic |
| TTGTACAAACTTGATCCACT+TGG | 0.653048 | 2_3:+15680607 | None:intergenic |
| TCCAGAAGTTGCCAACAATG+TGG | 0.656828 | 2_3:-15684223 | Msa0280770:CDS |
| CCACAAACAATGCTGTAGGA+GGG | 0.657343 | 2_3:+15683385 | None:intergenic |
| ACAAATTGCTCAAAGCGATG+GGG | 0.661613 | 2_3:+15684069 | None:intergenic |
| AAATTCATAGAAGTTCGAGA+AGG | 0.666169 | 2_3:+15681630 | None:intergenic |
| AAAGACCGTCGCCTACAAGA+GGG | 0.680199 | 2_3:-15683435 | Msa0280770:CDS |
| GAGTCAGTACTTGAAGAAGG+TGG | 0.684127 | 2_3:-15680287 | Msa0280770:CDS |
| TGGATTAGCATCAGCCATGG+GGG | 0.691846 | 2_3:+15684242 | None:intergenic |
| GGATAGTGGAAATCTTTGCG+AGG | 0.699101 | 2_3:+15680552 | None:intergenic |
| GGATTTATTAGGGATCACGA+TGG | 0.729747 | 2_3:-15684408 | Msa0280770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAAATAAATCTTATTGATA+AGG | + | chr2_3:15680714-15680733 | None:intergenic | 15.0% |
| !! | TAAGATTTATTTCAAAAATG+AGG | - | chr2_3:15680720-15680739 | Msa0280770:intron | 15.0% |
| !! | AATATAACTTTGATATAATG+TGG | - | chr2_3:15680892-15680911 | Msa0280770:intron | 15.0% |
| !!! | ATTTTATGTGCAATATAATA+AGG | - | chr2_3:15681053-15681072 | Msa0280770:intron | 15.0% |
| !! | TTAATATTAATGTATGTTGA+TGG | - | chr2_3:15681530-15681549 | Msa0280770:intron | 15.0% |
| !! | CTTTATTAATAGATGATATA+AGG | + | chr2_3:15681704-15681723 | None:intergenic | 15.0% |
| !! | TAAGGAAAATAGTAATTAAA+AGG | + | chr2_3:15681743-15681762 | None:intergenic | 15.0% |
| !!! | ATTTTTTACTTTGATAGATT+TGG | + | chr2_3:15682037-15682056 | None:intergenic | 15.0% |
| !!! | TTGTACAATCTTTAATTTTA+TGG | - | chr2_3:15683559-15683578 | Msa0280770:CDS | 15.0% |
| !! | CTAAGAACAACAAATATAAA+TGG | + | chr2_3:15680198-15680217 | None:intergenic | 20.0% |
| !!! | CATTTATATTTGTTGTTCTT+AGG | - | chr2_3:15680196-15680215 | Msa0280770:intron | 20.0% |
| !!! | TTTTTAGTATAACTTACCAT+TGG | + | chr2_3:15680683-15680702 | None:intergenic | 20.0% |
| !! | CAATATTTATTAGATCAAAC+TGG | + | chr2_3:15680865-15680884 | None:intergenic | 20.0% |
| !! | AAAATGCTATACAAAAGATA+TGG | + | chr2_3:15681084-15681103 | None:intergenic | 20.0% |
| !! | AATATACATTACATACCAAA+AGG | + | chr2_3:15681512-15681531 | None:intergenic | 20.0% |
| !! | ACATAAGAAATAACATCAAA+AGG | + | chr2_3:15681611-15681630 | None:intergenic | 20.0% |
| !! | ATAAATTTAGAGAATGTGTT+TGG | - | chr2_3:15682269-15682288 | Msa0280770:intron | 20.0% |
| !!! | AATATTTGAAGTTTGCAAAT+TGG | - | chr2_3:15682476-15682495 | Msa0280770:intron | 20.0% |
| !!! | AAGGTGTGTTTTATATTAAA+TGG | - | chr2_3:15682661-15682680 | Msa0280770:intron | 20.0% |
| !! | GTAAAAGAATAATTAGATCT+TGG | + | chr2_3:15682741-15682760 | None:intergenic | 20.0% |
| !!! | TTATTTGGTTTGAAAATTGA+AGG | - | chr2_3:15682899-15682918 | Msa0280770:intron | 20.0% |
| !!! | TATTTGGTTTGAAAATTGAA+GGG | - | chr2_3:15682900-15682919 | Msa0280770:intron | 20.0% |
| !! | TCAACCATTAAAATATGTAA+GGG | + | chr2_3:15683143-15683162 | None:intergenic | 20.0% |
| !!! | AAGGTGTGTTTTATATTAAA+TGG | - | chr2_3:15682661-15682680 | Msa0280770:intron | 20.0% |
| !! | ATAATTAGATCTTGGTAAAA+TGG | + | chr2_3:15682733-15682752 | None:intergenic | 20.0% |
| !! | AGAAAAAAAAAAACTCTCAA+AGG | - | chr2_3:15683934-15683953 | Msa0280770:intron | 20.0% |
| !! | TGCAAAAAACTAGAATTAAT+TGG | - | chr2_3:15684340-15684359 | Msa0280770:CDS | 20.0% |
| !!! | TAATCAAGAAAACATCATTT+TGG | - | chr2_3:15684525-15684544 | Msa0280770:intron | 20.0% |
| !! | ATCATATATATCTACTTTGA+AGG | + | chr2_3:15684554-15684573 | None:intergenic | 20.0% |
| ! | TTAACAAGCAAGGATTTATT+AGG | - | chr2_3:15680273-15680292 | Msa0280770:CDS | 25.0% |
| ! | TAACAAGCAAGGATTTATTA+GGG | - | chr2_3:15680274-15680293 | Msa0280770:CDS | 25.0% |
| ! | AATATCAATGACTTCTTGAT+GGG | + | chr2_3:15680558-15680577 | None:intergenic | 25.0% |
| ! | TAATATCAATGACTTCTTGA+TGG | + | chr2_3:15680559-15680578 | None:intergenic | 25.0% |
| ! | AAATCTTATTGATAAGGAGA+AGG | + | chr2_3:15680708-15680727 | None:intergenic | 25.0% |
| ! | ATAAAACATAAGGTGGAATT+TGG | + | chr2_3:15680783-15680802 | None:intergenic | 25.0% |
| !!! | TTTTTCAAAGTATCTTGAGT+TGG | - | chr2_3:15680932-15680951 | Msa0280770:intron | 25.0% |
| !!! | CATGACTTTAGTTTTGTTTT+TGG | - | chr2_3:15681460-15681479 | Msa0280770:CDS | 25.0% |
| !!! | TTAGTTTTGTTTTTGGAACT+TGG | - | chr2_3:15681467-15681486 | Msa0280770:CDS | 25.0% |
| ! | TATGTACCAGAATACAATTT+CGG | - | chr2_3:15681640-15681659 | Msa0280770:CDS | 25.0% |
| !! | AATTTCGGTTTTTGTGTATA+TGG | - | chr2_3:15681655-15681674 | Msa0280770:CDS | 25.0% |
| !! | TTACTATTTTCCTTACAACT+TGG | - | chr2_3:15681748-15681767 | Msa0280770:intron | 25.0% |
| !! | ACAATGACATATCAATGTTT+TGG | - | chr2_3:15681926-15681945 | Msa0280770:intron | 25.0% |
| !! | GGAATAATGAAAACACTTTT+TGG | + | chr2_3:15681984-15682003 | None:intergenic | 25.0% |
| !! | AATCTTTCTCCATTGATTAA+TGG | - | chr2_3:15682347-15682366 | Msa0280770:intron | 25.0% |
| ! | ATCATCTTACCATTAATCAA+TGG | + | chr2_3:15682359-15682378 | None:intergenic | 25.0% |
| ! | TTAATCAACTAACTCCATTT+GGG | + | chr2_3:15682447-15682466 | None:intergenic | 25.0% |
| ! | TTTAATCAACTAACTCCATT+TGG | + | chr2_3:15682448-15682467 | None:intergenic | 25.0% |
| ! | TGAGTTTGAGAATGATTATT+TGG | + | chr2_3:15682537-15682556 | None:intergenic | 25.0% |
| !!! | TTTGTCAATCCTTTTTTGAT+TGG | + | chr2_3:15682643-15682662 | None:intergenic | 25.0% |
| ! | AATCAAAAAAGGATTGACAA+AGG | - | chr2_3:15682642-15682661 | Msa0280770:intron | 25.0% |
| ! | CAGAAAAAAAAAACTCTCAA+AGG | - | chr2_3:15682806-15682825 | Msa0280770:intron | 25.0% |
| ! | AAAAAAAAAACTCTCAAAGG+AGG | - | chr2_3:15682809-15682828 | Msa0280770:intron | 25.0% |
| ! | TCAAACCAAATAAATCTTGT+AGG | + | chr2_3:15682892-15682911 | None:intergenic | 25.0% |
| !! | TTTGGGTGAGTAATTTTTAA+AGG | - | chr2_3:15683082-15683101 | Msa0280770:intron | 25.0% |
| ! | GTCAACCATTAAAATATGTA+AGG | + | chr2_3:15683144-15683163 | None:intergenic | 25.0% |
| ! | AGAAGATAAACATTCAATGT+TGG | + | chr2_3:15683286-15683305 | None:intergenic | 25.0% |
| !!! | ACACATTCTCTAAAATGATA+TGG | + | chr2_3:15683430-15683449 | None:intergenic | 25.0% |
| !!! | TTTGTCAATCCTTTTTTGAT+TGG | + | chr2_3:15682643-15682662 | None:intergenic | 25.0% |
| ! | AATCAAAAAAGGATTGACAA+AGG | - | chr2_3:15682642-15682661 | Msa0280770:intron | 25.0% |
| !! | TGAAAAGCATAATTAGATCT+TGG | + | chr2_3:15683869-15683888 | None:intergenic | 25.0% |
| ! | AAAAAAAAAACTCTCAAAGG+AGG | - | chr2_3:15682809-15682828 | Msa0280770:intron | 25.0% |
| ! | TTATGCCTACAAGATTTATT+TGG | - | chr2_3:15684012-15684031 | Msa0280770:intron | 25.0% |
| ! | TCAAACCAAATAAATCTTGT+AGG | + | chr2_3:15682892-15682911 | None:intergenic | 25.0% |
| ! | AGAAGATAAACATTCAATGT+TGG | + | chr2_3:15683286-15683305 | None:intergenic | 25.0% |
| ! | AACATTGAATGTTTATCTTC+TGG | - | chr2_3:15683285-15683304 | Msa0280770:intron | 25.0% |
| ! | AAACTAGAATTAATTGGAGA+AGG | - | chr2_3:15684346-15684365 | Msa0280770:CDS | 25.0% |
| ! | CATTAATGCATTGTATATCA+GGG | - | chr2_3:15684500-15684519 | Msa0280770:intron | 25.0% |
| ! | ATTAATGCATTGTATATCAG+GGG | - | chr2_3:15684501-15684520 | Msa0280770:intron | 25.0% |
| ACTCTACAAATTAACAAGCA+AGG | - | chr2_3:15680263-15680282 | Msa0280770:CDS | 30.0% | |
| ! | TCTGGAATTTCAATGAAGAA+TGG | - | chr2_3:15680341-15680360 | Msa0280770:CDS | 30.0% |
| GTAACAATGAACATGTTCAA+GGG | + | chr2_3:15680431-15680450 | None:intergenic | 30.0% | |
| AACAAGGGTGAAAAATCATT+GGG | - | chr2_3:15681212-15681231 | Msa0280770:CDS | 30.0% | |
| !!! | GTTTTTTGCAATGTGTTAGT+TGG | - | chr2_3:15681371-15681390 | Msa0280770:intron | 30.0% |
| TTAACATGACATCTTTGTCT+TGG | - | chr2_3:15681406-15681425 | Msa0280770:CDS | 30.0% | |
| TGAGCTGCATAATAAAACAT+TGG | + | chr2_3:15681442-15681461 | None:intergenic | 30.0% | |
| TACATTACATACCAAAAGGT+GGG | + | chr2_3:15681508-15681527 | None:intergenic | 30.0% | |
| ATACATTACATACCAAAAGG+TGG | + | chr2_3:15681509-15681528 | None:intergenic | 30.0% | |
| !! | TCATGCAGCTTTAATTTGTA+TGG | - | chr2_3:15681576-15681595 | Msa0280770:intron | 30.0% |
| CAAAAACCGAAATTGTATTC+TGG | + | chr2_3:15681649-15681668 | None:intergenic | 30.0% | |
| TTTCCTTACAACTTGGTATA+TGG | - | chr2_3:15681755-15681774 | Msa0280770:intron | 30.0% | |
| CTTCTTTGTAGGTATATTGT+GGG | + | chr2_3:15681852-15681871 | None:intergenic | 30.0% | |
| TCTTCTTTGTAGGTATATTG+TGG | + | chr2_3:15681853-15681872 | None:intergenic | 30.0% | |
| AAAGCAATTGTCTTCTTTGT+AGG | + | chr2_3:15681863-15681882 | None:intergenic | 30.0% | |
| ACACTATGTGACAAAAAATG+TGG | + | chr2_3:15681956-15681975 | None:intergenic | 30.0% | |
| !!! | TTTTTTGTCACATAGTGTGT+AGG | - | chr2_3:15681958-15681977 | Msa0280770:intron | 30.0% |
| TGATAGATTTGGATTGAGAA+AGG | + | chr2_3:15682026-15682045 | None:intergenic | 30.0% | |
| AATCCAAACTTCTTCAACAA+TGG | - | chr2_3:15682079-15682098 | Msa0280770:intron | 30.0% | |
| CTAATGATTCAACAAGTGAA+AGG | - | chr2_3:15682105-15682124 | Msa0280770:intron | 30.0% | |
| AAAGAGATCTCTATCAACAA+AGG | - | chr2_3:15682154-15682173 | Msa0280770:intron | 30.0% | |
| AAACATGCAATGTTACAAAG+AGG | - | chr2_3:15682615-15682634 | Msa0280770:intron | 30.0% | |
| AACATGCAATGTTACAAAGA+GGG | - | chr2_3:15682616-15682635 | Msa0280770:intron | 30.0% | |
| CACATTAATTCCAGATAATG+AGG | - | chr2_3:15682760-15682779 | Msa0280770:intron | 30.0% | |
| ATGTAAGTACCATATGTGAA+AGG | + | chr2_3:15682855-15682874 | None:intergenic | 30.0% | |
| TTGTGCCTACAAGATTTATT+TGG | - | chr2_3:15682884-15682903 | Msa0280770:intron | 30.0% | |
| AAATTCATAGAAGTTCGAGA+AGG | + | chr2_3:15683065-15683084 | None:intergenic | 30.0% | |
| TTCTCGAACTTCTATGAATT+TGG | - | chr2_3:15683064-15683083 | Msa0280770:intron | 30.0% | |
| TCTCGAACTTCTATGAATTT+GGG | - | chr2_3:15683065-15683084 | Msa0280770:intron | 30.0% | |
| !! | CACACCCTTACATATTTTAA+TGG | - | chr2_3:15683136-15683155 | Msa0280770:intron | 30.0% |
| CATATAGCATCAAACTTAGT+TGG | - | chr2_3:15683341-15683360 | Msa0280770:intron | 30.0% | |
| GCTAATTCATCTATGAATCA+AGG | - | chr2_3:15683455-15683474 | Msa0280770:CDS | 30.0% | |
| ! | ATAGAAAGCTGACTTCTAAA+AGG | + | chr2_3:15683500-15683519 | None:intergenic | 30.0% |
| CAGCTTTCTATATTGATGAA+TGG | - | chr2_3:15683509-15683528 | Msa0280770:CDS | 30.0% | |
| ! | AGGACTTATTGATTGAGTTT+GGG | + | chr2_3:15683678-15683697 | None:intergenic | 30.0% |
| TAGATCTTGGTAAAATGGTT+TGG | + | chr2_3:15683856-15683875 | None:intergenic | 30.0% | |
| ATGTAAGTACCATTTGTGAA+GGG | + | chr2_3:15683983-15684002 | None:intergenic | 30.0% | |
| TATGTAAGTACCATTTGTGA+AGG | + | chr2_3:15683984-15684003 | None:intergenic | 30.0% | |
| TTGATTGATGAGTTTGATGA+TGG | + | chr2_3:15684432-15684451 | None:intergenic | 30.0% | |
| TCATCAAACTCATCAATCAA+TGG | - | chr2_3:15684432-15684451 | Msa0280770:CDS | 30.0% | |
| CCTGATATACAATGCATTAA+TGG | + | chr2_3:15684502-15684521 | None:intergenic | 30.0% | |
| CCATTAATGCATTGTATATC+AGG | - | chr2_3:15684499-15684518 | Msa0280770:intron | 30.0% | |
| AGGTAGAATTGAAAATCCAC+AGG | + | chr2_3:15680230-15680249 | None:intergenic | 35.0% | |
| ! | GTAGAGTGTCTTGATTTCTT+AGG | + | chr2_3:15680250-15680269 | None:intergenic | 35.0% |
| GATTGTTATCCGTCTTGATA+TGG | - | chr2_3:15680313-15680332 | Msa0280770:CDS | 35.0% | |
| TATTCGAATTTCGCAAGAGT+AGG | + | chr2_3:15680401-15680420 | None:intergenic | 35.0% | |
| CTTGCGAAATTCGAATATCT+AGG | - | chr2_3:15680404-15680423 | Msa0280770:intron | 35.0% | |
| GGTAACAATGAACATGTTCA+AGG | + | chr2_3:15680432-15680451 | None:intergenic | 35.0% | |
| AACAAATTGCTCAAAGCGAT+GGG | + | chr2_3:15680627-15680646 | None:intergenic | 35.0% | |
| AAACAAATTGCTCAAAGCGA+TGG | + | chr2_3:15680628-15680647 | None:intergenic | 35.0% | |
| TTCCATGCGCATAAAACATA+AGG | + | chr2_3:15680793-15680812 | None:intergenic | 35.0% | |
| ! | ATCTCTCTAGAAACACGATT+GGG | + | chr2_3:15681107-15681126 | None:intergenic | 35.0% |
| ! | TATCTCTCTAGAAACACGAT+TGG | + | chr2_3:15681108-15681127 | None:intergenic | 35.0% |
| TGGAGGTTGAGAAAGAATAT+AGG | - | chr2_3:15681165-15681184 | Msa0280770:intron | 35.0% | |
| TTGAGAAAGAATATAGGTGC+CGG | - | chr2_3:15681171-15681190 | Msa0280770:intron | 35.0% | |
| GAACAAGGGTGAAAAATCAT+TGG | - | chr2_3:15681211-15681230 | Msa0280770:CDS | 35.0% | |
| AAAAATCATTGGGAAGAGGA+TGG | - | chr2_3:15681222-15681241 | Msa0280770:CDS | 35.0% | |
| TGACAAGCTTATCTTTGAGT+TGG | - | chr2_3:15681280-15681299 | Msa0280770:intron | 35.0% | |
| TTGCAATGTGTTAGTTGGAT+TGG | - | chr2_3:15681376-15681395 | Msa0280770:intron | 35.0% | |
| TGCAATGTGTTAGTTGGATT+GGG | - | chr2_3:15681377-15681396 | Msa0280770:intron | 35.0% | |
| !! | AATGTATGTTGATGGCTTCA+TGG | - | chr2_3:15681538-15681557 | Msa0280770:intron | 35.0% |
| TATATGGATAGTGCACATGT+TGG | - | chr2_3:15681671-15681690 | Msa0280770:CDS | 35.0% | |
| ACACCATATACCAAGTTGTA+AGG | + | chr2_3:15681761-15681780 | None:intergenic | 35.0% | |
| !! | TTCACGTTAAAGCATTGCAT+TGG | - | chr2_3:15681812-15681831 | Msa0280770:intron | 35.0% |
| !! | TTGCATTGGTTGCTTTATTG+TGG | - | chr2_3:15681826-15681845 | Msa0280770:intron | 35.0% |
| GGCTAAAGGAAATAGTGTAT+TGG | + | chr2_3:15682005-15682024 | None:intergenic | 35.0% | |
| TTTGGATTGAGAAAGGCTAA+AGG | + | chr2_3:15682019-15682038 | None:intergenic | 35.0% | |
| CTTCCATTGTTGAAGAAGTT+TGG | + | chr2_3:15682085-15682104 | None:intergenic | 35.0% | |
| ! | TAGAGATCTCTTTTGTGATG+AGG | + | chr2_3:15682147-15682166 | None:intergenic | 35.0% |
| !! | ATCAACAAAGGCATTGACAA+AGG | - | chr2_3:15682166-15682185 | Msa0280770:intron | 35.0% |
| ATTTCTTCTCAATGGCTCAT+TGG | + | chr2_3:15682330-15682349 | None:intergenic | 35.0% | |
| GGAGAAAGATTTCTTCTCAA+TGG | + | chr2_3:15682338-15682357 | None:intergenic | 35.0% | |
| !! | ATTTGGGTTAGTTCTATGGT+TGG | + | chr2_3:15682431-15682450 | None:intergenic | 35.0% |
| AACCATAGAACTAACCCAAA+TGG | - | chr2_3:15682430-15682449 | Msa0280770:intron | 35.0% | |
| AAAGAGGGTCCAATCAAAAA+AGG | - | chr2_3:15682631-15682650 | Msa0280770:intron | 35.0% | |
| CCATATGTGAAAGGTGAAAT+AGG | + | chr2_3:15682846-15682865 | None:intergenic | 35.0% | |
| CCTATTTCACCTTTCACATA+TGG | - | chr2_3:15682843-15682862 | Msa0280770:intron | 35.0% | |
| TCTATAGTTGACAATGCTTC+AGG | + | chr2_3:15682987-15683006 | None:intergenic | 35.0% | |
| GTTCGAGAAGGATTATTTGT+TGG | + | chr2_3:15683053-15683072 | None:intergenic | 35.0% | |
| TTGTACAAACTTGATCCAGT+TGG | + | chr2_3:15683201-15683220 | None:intergenic | 35.0% | |
| ATCAAGTTTGTACAAGAGGA+AGG | - | chr2_3:15683206-15683225 | Msa0280770:CDS | 35.0% | |
| !! | GGAATTCTTTTCGAGGTTAT+TGG | + | chr2_3:15683249-15683268 | None:intergenic | 35.0% |
| !! | ACATTCAATGTTGGTAACGT+CGG | + | chr2_3:15683277-15683296 | None:intergenic | 35.0% |
| ! | GAGGACTTATTGATTGAGTT+TGG | + | chr2_3:15683679-15683698 | None:intergenic | 35.0% |
| TGATGAATCATATTGCTCAC+TGG | + | chr2_3:15683705-15683724 | None:intergenic | 35.0% | |
| AGTGAGCAATATGATTCATC+AGG | - | chr2_3:15683704-15683723 | Msa0280770:intron | 35.0% | |
| AATATGATTCATCAGGTGCA+AGG | - | chr2_3:15683711-15683730 | Msa0280770:intron | 35.0% | |
| AAACACGCAATGTTACAAAG+AGG | - | chr2_3:15683743-15683762 | Msa0280770:intron | 35.0% | |
| AACACGCAATGTTACAAAGA+GGG | - | chr2_3:15683744-15683763 | Msa0280770:intron | 35.0% | |
| AAAGAGGGTCCAATCAAAAA+AGG | - | chr2_3:15682631-15682650 | Msa0280770:intron | 35.0% | |
| TTGTACAAACTTGATCCACT+TGG | + | chr2_3:15684088-15684107 | None:intergenic | 35.0% | |
| ATCAAGTTTGTACAAGAGGA+AGG | - | chr2_3:15683206-15683225 | Msa0280770:CDS | 35.0% | |
| !! | ACATTCAATGTTGGTAACGT+TGG | + | chr2_3:15683277-15683296 | None:intergenic | 35.0% |
| TTAGATGCATTTAGTGCTTG+AGG | + | chr2_3:15684315-15684334 | None:intergenic | 35.0% | |
| AGCACTAAATGCATCTAAGA+AGG | - | chr2_3:15684317-15684336 | Msa0280770:CDS | 35.0% | |
| !! | TTCTTAGGAGAAAGTACCTG+TGG | - | chr2_3:15680211-15680230 | Msa0280770:intron | 40.0% |
| GGATTTATTAGGGATCACGA+TGG | - | chr2_3:15680284-15680303 | Msa0280770:CDS | 40.0% | |
| TTTATTAGGGATCACGATGG+CGG | - | chr2_3:15680287-15680306 | Msa0280770:CDS | 40.0% | |
| CAGAGTCATCCATATCAAGA+CGG | + | chr2_3:15680325-15680344 | None:intergenic | 40.0% | |
| AAGAATGGTGCCTTAATTGC+TGG | - | chr2_3:15680356-15680375 | Msa0280770:CDS | 40.0% | |
| GCCTTAATTGCTGGATTGTT+TGG | - | chr2_3:15680365-15680384 | Msa0280770:CDS | 40.0% | |
| GCCAAACAATCCAGCAATTA+AGG | + | chr2_3:15680369-15680388 | None:intergenic | 40.0% | |
| TTGCACTAACTCCACATTGT+TGG | + | chr2_3:15680483-15680502 | None:intergenic | 40.0% | |
| TCAGATGAAGACCAAGATGA+AGG | - | chr2_3:15680581-15680600 | Msa0280770:CDS | 40.0% | |
| ACAAATTGCTCAAAGCGATG+GGG | + | chr2_3:15680626-15680645 | None:intergenic | 40.0% | |
| !! | GCAATTTGTTTCTGCTGCTA+TGG | - | chr2_3:15680637-15680656 | Msa0280770:intron | 40.0% |
| GTCTGTTTATGGACAACCAA+TGG | - | chr2_3:15680664-15680683 | Msa0280770:intron | 40.0% | |
| CATGCGCATAAAACATAAGG+TGG | + | chr2_3:15680790-15680809 | None:intergenic | 40.0% | |
| ! | CACCTTATGTTTTATGCGCA+TGG | - | chr2_3:15680788-15680807 | Msa0280770:intron | 40.0% |
| ! | TATTGACTGTGCCAAGAAAG+TGG | - | chr2_3:15681126-15681145 | Msa0280770:intron | 40.0% |
| ACCAAGATCATCCACTTTCT+TGG | + | chr2_3:15681140-15681159 | None:intergenic | 40.0% | |
| GGTGAAAAATCATTGGGAAG+AGG | - | chr2_3:15681218-15681237 | Msa0280770:CDS | 40.0% | |
| ACATCCACAAACAATGCTGT+AGG | + | chr2_3:15681314-15681333 | None:intergenic | 40.0% | |
| TACAGCATTGTTTGTGGATG+TGG | - | chr2_3:15681313-15681332 | Msa0280770:intron | 40.0% | |
| GCAATGTGTTAGTTGGATTG+GGG | - | chr2_3:15681378-15681397 | Msa0280770:intron | 40.0% | |
| ! | CAATGTGTTAGTTGGATTGG+GGG | - | chr2_3:15681379-15681398 | Msa0280770:intron | 40.0% |
| ! | GAAGTTATGATCCCACCTTT+TGG | - | chr2_3:15681494-15681513 | Msa0280770:CDS | 40.0% |
| !! | CTCCATTTGGGTTAGTTCTA+TGG | + | chr2_3:15682435-15682454 | None:intergenic | 40.0% |
| GAATCAGATTTCTCACTGGA+TGG | + | chr2_3:15682573-15682592 | None:intergenic | 40.0% | |
| TGAGGAATCAGATTTCTCAC+TGG | + | chr2_3:15682577-15682596 | None:intergenic | 40.0% | |
| AATCTGATTCCTCATGTGCA+AGG | - | chr2_3:15682583-15682602 | Msa0280770:intron | 40.0% | |
| TAGTCAACAGCCTCATTATC+TGG | + | chr2_3:15682773-15682792 | None:intergenic | 40.0% | |
| ! | AGGCTGTTGACTATGCTTTA+AGG | - | chr2_3:15682780-15682799 | Msa0280770:intron | 40.0% |
| AGCATTGTCAACTATAGAGC+AGG | - | chr2_3:15682989-15683008 | Msa0280770:intron | 40.0% | |
| TCAACTATAGAGCAGGCAAA+TGG | - | chr2_3:15682996-15683015 | Msa0280770:intron | 40.0% | |
| ! | TAAGGGTGTGTACAATCTTG+TGG | + | chr2_3:15683126-15683145 | None:intergenic | 40.0% |
| CTGGATCAAGTTTGTACAAG+AGG | - | chr2_3:15683202-15683221 | Msa0280770:CDS | 40.0% | |
| !!! | GGATAGTGGAATTCTTTTCG+AGG | + | chr2_3:15683256-15683275 | None:intergenic | 40.0% |
| ! | CTGACTTCTAAAAGGCTCAT+TGG | + | chr2_3:15683492-15683511 | None:intergenic | 40.0% |
| GAATCATATTGCTCACTGGA+TGG | + | chr2_3:15683701-15683720 | None:intergenic | 40.0% | |
| CACATCAATTCCAGAGAATG+AGG | - | chr2_3:15683887-15683906 | Msa0280770:intron | 40.0% | |
| CCATTTGTGAAGGGTGAAAT+AGG | + | chr2_3:15683974-15683993 | None:intergenic | 40.0% | |
| CCTATTTCACCCTTCACAAA+TGG | - | chr2_3:15683971-15683990 | Msa0280770:intron | 40.0% | |
| GTGGATCAAGTTTGTACAAG+AGG | - | chr2_3:15684089-15684108 | Msa0280770:CDS | 40.0% | |
| GGAAATCTTTGCGAGGTTAT+TGG | + | chr2_3:15684136-15684155 | None:intergenic | 40.0% | |
| !! | ATGTTGGTAACGTTGGATAG+TGG | + | chr2_3:15684157-15684176 | None:intergenic | 40.0% |
| TTCGAGTCAGTACTTGAAGA+AGG | - | chr2_3:15684402-15684421 | Msa0280770:CDS | 40.0% | |
| ACAGTGTTACATACCTCTGC+CGG | + | chr2_3:15680138-15680157 | None:intergenic | 45.0% | |
| CGTCTTGATATGGATGACTC+TGG | - | chr2_3:15680323-15680342 | Msa0280770:CDS | 45.0% | |
| CATGTTCATTGTTACCCCCA+TGG | - | chr2_3:15680436-15680455 | Msa0280770:intron | 45.0% | |
| !! | TCTGGATTAGCATCAGCCAT+GGG | + | chr2_3:15680455-15680474 | None:intergenic | 45.0% |
| !! | TTCTGGATTAGCATCAGCCA+TGG | + | chr2_3:15680456-15680475 | None:intergenic | 45.0% |
| TCCAGAAGTTGCCAACAATG+TGG | - | chr2_3:15680469-15680488 | Msa0280770:intron | 45.0% | |
| TCCACATTGTTGGCAACTTC+TGG | + | chr2_3:15680473-15680492 | None:intergenic | 45.0% | |
| CTTCTTGCTCACCTTCATCT+TGG | + | chr2_3:15680595-15680614 | None:intergenic | 45.0% | |
| AGATGAAGGTGAGCAAGAAG+AGG | - | chr2_3:15680595-15680614 | Msa0280770:CDS | 45.0% | |
| CAAATTGCTCAAAGCGATGG+GGG | + | chr2_3:15680625-15680644 | None:intergenic | 45.0% | |
| !! | TTGTTTCTGCTGCTATGGCT+CGG | - | chr2_3:15680642-15680661 | Msa0280770:intron | 45.0% |
| CAGCTCACTATGTCACATCT+TGG | + | chr2_3:15680985-15681004 | None:intergenic | 45.0% | |
| GCCAAGAAAGTGGATGATCT+TGG | - | chr2_3:15681136-15681155 | Msa0280770:intron | 45.0% | |
| GTGGATGATCTTGGTTGATC+TGG | - | chr2_3:15681145-15681164 | Msa0280770:intron | 45.0% | |
| GATGATCTTGGTTGATCTGG+AGG | - | chr2_3:15681148-15681167 | Msa0280770:intron | 45.0% | |
| AAACACGACTGAACGGAACA+AGG | - | chr2_3:15681196-15681215 | Msa0280770:CDS | 45.0% | |
| AACACGACTGAACGGAACAA+GGG | - | chr2_3:15681197-15681216 | Msa0280770:CDS | 45.0% | |
| TAAGCTTGTCACCCTCTTGT+AGG | + | chr2_3:15681271-15681290 | None:intergenic | 45.0% | |
| CCACAAACAATGCTGTAGGA+GGG | + | chr2_3:15681310-15681329 | None:intergenic | 45.0% | |
| TCCACAAACAATGCTGTAGG+AGG | + | chr2_3:15681311-15681330 | None:intergenic | 45.0% | |
| CAGATTTCTCACTGGATGGA+GGG | + | chr2_3:15682569-15682588 | None:intergenic | 45.0% | |
| TCAGATTTCTCACTGGATGG+AGG | + | chr2_3:15682570-15682589 | None:intergenic | 45.0% | |
| TCTCTTCAACCTTGCACATG+AGG | + | chr2_3:15682595-15682614 | None:intergenic | 45.0% | |
| ! | AACTCTCAAAGGAGGCACAA+AGG | - | chr2_3:15682817-15682836 | Msa0280770:intron | 45.0% |
| ACAGTTTCATCGACACCAAC+TGG | - | chr2_3:15683183-15683202 | Msa0280770:intron | 45.0% | |
| !! | ATGTTGGTAACGTCGGATAG+TGG | + | chr2_3:15683270-15683289 | None:intergenic | 45.0% |
| TCATATTGCTCACTGGATGG+AGG | + | chr2_3:15683698-15683717 | None:intergenic | 45.0% | |
| ! | AGGCTGCTGACTATGCTTTA+AGG | - | chr2_3:15683907-15683926 | Msa0280770:intron | 45.0% |
| ! | AACTCTCAAAGGAGGCACAA+AGG | - | chr2_3:15682817-15682836 | Msa0280770:intron | 45.0% |
| ACAGTTTCATCGACACCAAG+TGG | - | chr2_3:15684070-15684089 | Msa0280770:CDS | 45.0% | |
| !! | GGATAGTGGAAATCTTTGCG+AGG | + | chr2_3:15684143-15684162 | None:intergenic | 45.0% |
| GAGTCAGTACTTGAAGAAGG+TGG | - | chr2_3:15684405-15684424 | Msa0280770:CDS | 45.0% | |
| CAGTGTTACATACCTCTGCC+GGG | + | chr2_3:15680137-15680156 | None:intergenic | 50.0% | |
| !! | TGGATTAGCATCAGCCATGG+GGG | + | chr2_3:15680453-15680472 | None:intergenic | 50.0% |
| !! | CTGGATTAGCATCAGCCATG+GGG | + | chr2_3:15680454-15680473 | None:intergenic | 50.0% |
| TGAAAATCCACAAGTCGCGC+AGG | - | chr2_3:15680511-15680530 | Msa0280770:intron | 50.0% | |
| !! | GCTATGGCTCGGTCTGTTTA+TGG | - | chr2_3:15680653-15680672 | Msa0280770:intron | 50.0% |
| TCCGTTCAGTCGTGTTTAGC+CGG | + | chr2_3:15681193-15681212 | None:intergenic | 50.0% | |
| AAAGACCGTCGCCTACAAGA+GGG | - | chr2_3:15681257-15681276 | Msa0280770:intron | 50.0% | |
| CCCTCCTACAGCATTGTTTG+TGG | - | chr2_3:15681307-15681326 | Msa0280770:intron | 50.0% | |
| TGTTTGTGGATGTGGTGCGT+AGG | - | chr2_3:15681321-15681340 | Msa0280770:intron | 50.0% | |
| TAGTCAGCAGCCTCATTCTC+TGG | + | chr2_3:15683900-15683919 | None:intergenic | 50.0% | |
| ! | ATTAGGGATCACGATGGCGG+AGG | - | chr2_3:15680290-15680309 | Msa0280770:CDS | 55.0% |
| !! | TTAGGGATCACGATGGCGGA+GGG | - | chr2_3:15680291-15680310 | Msa0280770:CDS | 55.0% |
| AAATCCACAAGTCGCGCAGG+AGG | - | chr2_3:15680514-15680533 | Msa0280770:intron | 55.0% | |
| GCCGGCTAAACACGACTGAA+CGG | - | chr2_3:15681189-15681208 | Msa0280770:CDS | 55.0% | |
| CAAAGACCGTCGCCTACAAG+AGG | - | chr2_3:15681256-15681275 | Msa0280770:intron | 55.0% | |
| TGTCACCCTCTTGTAGGCGA+CGG | + | chr2_3:15681265-15681284 | None:intergenic | 55.0% | |
| ACAACCTCCTGCGCGACTTG+TGG | + | chr2_3:15680521-15680540 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 15680126 | 15684588 | 15680126 | ID=Msa0280770;Name=Msa0280770 |
| chr2_3 | mRNA | 15680126 | 15684588 | 15680126 | ID=Msa0280770-mRNA-1;Parent=Msa0280770;Name=Msa0280770-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|0.2|0.88|0.9|10|0|479 |
| chr2_3 | exon | 15684571 | 15684588 | 15684571 | ID=Msa0280770-mRNA-1:exon:6561;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15684029 | 15684496 | 15684029 | ID=Msa0280770-mRNA-1:exon:6560;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15683380 | 15683616 | 15683380 | ID=Msa0280770-mRNA-1:exon:6559;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15683199 | 15683256 | 15683199 | ID=Msa0280770-mRNA-1:exon:6558;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15681628 | 15681735 | 15681628 | ID=Msa0280770-mRNA-1:exon:6557;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15681405 | 15681527 | 15681405 | ID=Msa0280770-mRNA-1:exon:6556;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15681184 | 15681273 | 15681184 | ID=Msa0280770-mRNA-1:exon:6555;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15680518 | 15680640 | 15680518 | ID=Msa0280770-mRNA-1:exon:6554;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15680261 | 15680404 | 15680261 | ID=Msa0280770-mRNA-1:exon:6553;Parent=Msa0280770-mRNA-1 |
| chr2_3 | exon | 15680126 | 15680193 | 15680126 | ID=Msa0280770-mRNA-1:exon:6552;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15684571 | 15684588 | 15684571 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15684029 | 15684496 | 15684029 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15683380 | 15683616 | 15683380 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15683199 | 15683256 | 15683199 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15681628 | 15681735 | 15681628 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15681405 | 15681527 | 15681405 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15681184 | 15681273 | 15681184 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15680518 | 15680640 | 15680518 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15680261 | 15680404 | 15680261 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| chr2_3 | CDS | 15680126 | 15680193 | 15680126 | ID=Msa0280770-mRNA-1:cds;Parent=Msa0280770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
