Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284080 | QOV03064.1 | 97.440 | 586 | 15 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284080 | sp|Q5D0W8|NPR1_ORYSI | 57.220 | 554 | 200 | 8 | 50 | 576 | 36 | 579 | 0.0 | 574 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284080 | A0A7U3NJF6 | 97.440 | 586 | 15 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1185 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0284080 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284080 | MtrunA17_Chr2g0299621 | 94.369 | 586 | 31 | 1 | 1 | 586 | 1 | 584 | 0.0 | 1086 |
| Msa0284080 | MtrunA17_Chr2g0291741 | 43.649 | 559 | 282 | 11 | 18 | 558 | 21 | 564 | 2.46e-144 | 430 |
| Msa0284080 | MtrunA17_Chr5g0442661 | 40.113 | 531 | 292 | 9 | 50 | 563 | 50 | 571 | 1.22e-123 | 377 |
| Msa0284080 | MtrunA17_Chr1g0171771 | 30.997 | 371 | 214 | 8 | 67 | 402 | 24 | 387 | 4.41e-38 | 147 |
| Msa0284080 | MtrunA17_Chr7g0256321 | 30.645 | 372 | 215 | 7 | 67 | 402 | 24 | 388 | 8.47e-38 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284080 | AT1G64280.1 | 51.664 | 571 | 243 | 9 | 7 | 558 | 7 | 563 | 0.0 | 550 |
| Msa0284080 | AT4G26120.2 | 49.913 | 575 | 254 | 10 | 12 | 569 | 16 | 573 | 1.71e-176 | 513 |
| Msa0284080 | AT4G26120.1 | 49.913 | 575 | 254 | 10 | 12 | 569 | 15 | 572 | 1.90e-176 | 513 |
| Msa0284080 | AT4G19660.1 | 41.166 | 549 | 280 | 12 | 31 | 555 | 22 | 551 | 1.57e-123 | 376 |
| Msa0284080 | AT5G45110.1 | 42.614 | 528 | 271 | 11 | 50 | 556 | 43 | 559 | 2.89e-123 | 376 |
| Msa0284080 | AT4G19660.2 | 39.410 | 576 | 279 | 13 | 31 | 555 | 22 | 578 | 2.37e-118 | 363 |
| Msa0284080 | AT5G45110.2 | 41.822 | 483 | 249 | 11 | 50 | 514 | 43 | 511 | 7.77e-109 | 336 |
| Msa0284080 | AT3G57130.1 | 31.536 | 371 | 209 | 9 | 67 | 402 | 26 | 386 | 8.59e-41 | 154 |
| Msa0284080 | AT2G41370.1 | 29.899 | 398 | 223 | 10 | 54 | 402 | 3 | 393 | 3.36e-36 | 142 |
Find 97 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAATTTACTCCGAATT+TGG | 0.080716 | 2_3:-21918027 | Msa0284080:CDS |
| TGCGAGGAGTAGTTTCTTTA+AGG | 0.142531 | 2_3:-21919556 | Msa0284080:CDS |
| ACTAAACATTCTTGATAAAA+TGG | 0.238573 | 2_3:-21918986 | Msa0284080:CDS |
| CACCTTTCAAATTTCTGAAT+TGG | 0.280768 | 2_3:-21919304 | Msa0284080:CDS |
| GCGCTTCACTTGTCGATCTT+CGG | 0.290085 | 2_3:+21917538 | None:intergenic |
| TGAATTGGTTGCTCTTTATC+AGG | 0.291540 | 2_3:-21919289 | Msa0284080:intron |
| TATATTACTTGTTTCACTAT+AGG | 0.308533 | 2_3:+21918826 | None:intergenic |
| ATGTTTGTCTAGAAGATTTA+CGG | 0.318420 | 2_3:+21918768 | None:intergenic |
| ATCTAAAGCTCTATGTATTC+TGG | 0.325893 | 2_3:+21918741 | None:intergenic |
| CGCTTCACTTGTCGATCTTC+GGG | 0.329375 | 2_3:+21917539 | None:intergenic |
| GCTACAAGAAGTTCTTAATA+AGG | 0.338445 | 2_3:-21917501 | Msa0284080:CDS |
| ACTACTGAGCTTCTTGATCT+TGG | 0.343475 | 2_3:-21918613 | Msa0284080:CDS |
| TCGATTGTGTATCGAGATAT+TGG | 0.362910 | 2_3:-21918371 | Msa0284080:CDS |
| TCTGAATTTACTCCGAATTT+GGG | 0.369283 | 2_3:-21918026 | Msa0284080:CDS |
| TCATCTTGAGCAGTGGAGTT+GGG | 0.376033 | 2_3:-21917653 | Msa0284080:intron |
| AATTCAGATGTGCCATCAAT+TGG | 0.381830 | 2_3:+21918041 | None:intergenic |
| AAAGAGGAGTTTGATAAATC+TGG | 0.386748 | 2_3:-21917464 | Msa0284080:CDS |
| GAAGTAGTGATAGCTGAATT+TGG | 0.388122 | 2_3:+21919729 | None:intergenic |
| GTGACTAAGGATTATGATGT+TGG | 0.390092 | 2_3:-21919489 | Msa0284080:CDS |
| ATTGTTTACACTTTGGTTGT+TGG | 0.395598 | 2_3:-21919368 | Msa0284080:CDS |
| TCATCCTCATCCACGTCAAT+AGG | 0.401640 | 2_3:-21917431 | Msa0284080:CDS |
| CTCTGGTAACCACCCAAATT+CGG | 0.409123 | 2_3:+21918014 | None:intergenic |
| ATATACAAACGCAAACAATT+AGG | 0.413643 | 2_3:-21918808 | Msa0284080:CDS |
| CAAACTCCTCTTTGTCCTCA+TGG | 0.421934 | 2_3:+21917474 | None:intergenic |
| AGAAACTTCTCGACCATCTC+TGG | 0.426255 | 2_3:+21919599 | None:intergenic |
| TAAAAGAGGAGCATCTAATT+CGG | 0.429046 | 2_3:-21917956 | Msa0284080:CDS |
| TCTCTTTCTCTTGCTAAGGC+AGG | 0.429539 | 2_3:-21918310 | Msa0284080:CDS |
| CTCTTTCTCTTGCTAAGGCA+GGG | 0.442710 | 2_3:-21918309 | Msa0284080:CDS |
| GTCATCTTGAGCAGTGGAGT+TGG | 0.451507 | 2_3:-21917654 | Msa0284080:intron |
| GGCATCTCTTTCTCTTGCTA+AGG | 0.467473 | 2_3:-21918314 | Msa0284080:CDS |
| CCTATCGCAGCTTGCATGCA+TGG | 0.468067 | 2_3:-21917573 | Msa0284080:CDS |
| TGGTTACCAGAGGACAACTA+TGG | 0.474344 | 2_3:-21918003 | Msa0284080:CDS |
| ATGGATATCAATCCAATTGA+TGG | 0.475189 | 2_3:-21918053 | Msa0284080:CDS |
| TGACTAAGGATTATGATGTT+GGG | 0.476464 | 2_3:-21919488 | Msa0284080:CDS |
| CTTTCTATAGCAAACGTTTG+TGG | 0.477691 | 2_3:-21918940 | Msa0284080:CDS |
| GTTCTGCGTTATTTGTATAG+TGG | 0.478232 | 2_3:-21919447 | Msa0284080:CDS |
| TGAAGCATGAAATCAACAAC+AGG | 0.485589 | 2_3:+21919345 | None:intergenic |
| ATCACAACCTTTGCTTCCAT+CGG | 0.509584 | 2_3:+21918074 | None:intergenic |
| GCAACTGAAGGAAGTGACTA+AGG | 0.511330 | 2_3:-21919502 | Msa0284080:CDS |
| GAGCAGTGGAGTTGGGGAAA+CGG | 0.514130 | 2_3:-21917646 | Msa0284080:intron |
| CTTTCCTATTGACGTGGATG+AGG | 0.515811 | 2_3:+21917427 | None:intergenic |
| AGAAGTGTTGAACAAGATCA+TGG | 0.517746 | 2_3:-21917606 | Msa0284080:CDS |
| TCTTTCTCTTGCTAAGGCAG+GGG | 0.519191 | 2_3:-21918308 | Msa0284080:CDS |
| ATTGGAGCAAGCTGAGAGAA+GGG | 0.524671 | 2_3:-21918353 | Msa0284080:CDS |
| GATGATGATTGTTTACACTT+TGG | 0.524715 | 2_3:-21919375 | Msa0284080:CDS |
| ATTGTATCTTTGTTAACGAA+GGG | 0.525145 | 2_3:-21918511 | Msa0284080:CDS |
| GTCGAGAAGTTTCTGTGCAC+CGG | 0.525175 | 2_3:-21919590 | Msa0284080:CDS |
| TCAAGTCCATAGTTGTCCTC+TGG | 0.525929 | 2_3:+21917997 | None:intergenic |
| ACTTGTTTCACTATAGGTTG+AGG | 0.534550 | 2_3:+21918832 | None:intergenic |
| ATAATGATGTACTTGAGAAG+TGG | 0.540852 | 2_3:-21919822 | Msa0284080:CDS |
| TATTGGAGCAAGCTGAGAGA+AGG | 0.543360 | 2_3:-21918354 | Msa0284080:CDS |
| TATTATAAATCTACTGAGGA+AGG | 0.543578 | 2_3:-21918412 | Msa0284080:CDS |
| CATCTTGAGCAGTGGAGTTG+GGG | 0.545384 | 2_3:-21917652 | Msa0284080:intron |
| TAAATCTACTGAGGAAGGAA+AGG | 0.549862 | 2_3:-21918407 | Msa0284080:CDS |
| GGCACCATTTAAAATAAAAG+AGG | 0.551112 | 2_3:-21917970 | Msa0284080:CDS |
| TATTGTATCTTTGTTAACGA+AGG | 0.551812 | 2_3:-21918512 | Msa0284080:CDS |
| CCTTCTGAACTCACTTTCGA+TGG | 0.555532 | 2_3:-21918481 | Msa0284080:CDS |
| ATGAAGGCATTATCTAGAGC+AGG | 0.556683 | 2_3:-21917933 | Msa0284080:intron |
| CCTTGACTTTCCTATTGACG+TGG | 0.557026 | 2_3:+21917421 | None:intergenic |
| GGAGCATCTAATTCGGATGA+AGG | 0.559476 | 2_3:-21917949 | Msa0284080:CDS |
| TGCAAGCTGCGATAGGTCAT+CGG | 0.560452 | 2_3:+21917580 | None:intergenic |
| CTATCGCAGCTTGCATGCAT+GGG | 0.560772 | 2_3:-21917572 | Msa0284080:CDS |
| GCAAAGATCATTGCCAGAGA+TGG | 0.562499 | 2_3:-21919612 | Msa0284080:CDS |
| AACCAATTCAGAAATTTGAA+AGG | 0.567258 | 2_3:+21919302 | None:intergenic |
| AGAAACGATGCTGCAACTGA+AGG | 0.567744 | 2_3:-21919514 | Msa0284080:CDS |
| CCATGCATGCAAGCTGCGAT+AGG | 0.568643 | 2_3:+21917573 | None:intergenic |
| AGAGATGCCTCACCATGTAA+AGG | 0.569360 | 2_3:+21918328 | None:intergenic |
| GAGAGAAGGGAGCCTTTACA+TGG | 0.569857 | 2_3:-21918340 | Msa0284080:CDS |
| CCATCGAAAGTGAGTTCAGA+AGG | 0.573318 | 2_3:+21918481 | None:intergenic |
| CAGATGATGTAGAGTTAGCA+AGG | 0.573635 | 2_3:-21918717 | Msa0284080:CDS |
| TAAAGATGTTTGTGTTTGTG+TGG | 0.576566 | 2_3:-21919397 | Msa0284080:CDS |
| TTTGTTTCCGATGGAAGCAA+AGG | 0.576921 | 2_3:-21918081 | Msa0284080:CDS |
| GACAACTATGGACTTGAATG+AGG | 0.586182 | 2_3:-21917991 | Msa0284080:CDS |
| TCTGGCAATGATCTTTGCAT+CGG | 0.586644 | 2_3:+21919617 | None:intergenic |
| AAGCTATATTGTCTGATAGA+CGG | 0.587341 | 2_3:+21919673 | None:intergenic |
| GAATTTACTCCGAATTTGGG+TGG | 0.590924 | 2_3:-21918023 | Msa0284080:CDS |
| GATGGAAGCAAAGGTTGTGA+TGG | 0.592814 | 2_3:-21918072 | Msa0284080:CDS |
| CCACGTCAATAGGAAAGTCA+AGG | 0.595019 | 2_3:-21917421 | Msa0284080:CDS |
| AACGAAATCAGCAACAACAC+TGG | 0.604355 | 2_3:-21919783 | Msa0284080:CDS |
| TCCTCGCAGACAAAATGCAC+CGG | 0.610061 | 2_3:+21919571 | None:intergenic |
| AAAGCGTAGTACGAAAGCTG+TGG | 0.616351 | 2_3:-21918437 | Msa0284080:CDS |
| AAGGGAGCCTTTACATGGTG+AGG | 0.619314 | 2_3:-21918335 | Msa0284080:CDS |
| GGCAATAGATGACATGTTGG+TGG | 0.623200 | 2_3:-21918965 | Msa0284080:CDS |
| CACGTCAATAGGAAAGTCAA+GGG | 0.630823 | 2_3:-21917420 | Msa0284080:CDS |
| CGAATTTGGGTGGTTACCAG+AGG | 0.630852 | 2_3:-21918013 | Msa0284080:CDS |
| ATATTGTCTGATAGACGGAT+CGG | 0.631580 | 2_3:+21919678 | None:intergenic |
| AATGGCAATAGATGACATGT+TGG | 0.633106 | 2_3:-21918968 | Msa0284080:CDS |
| AAGATCAAGAAGCTCAGTAG+TGG | 0.633228 | 2_3:+21918615 | None:intergenic |
| CATGTGATAAACTACTAACA+AGG | 0.637446 | 2_3:-21918912 | Msa0284080:CDS |
| GGTCTTCCATGAGGACAAAG+AGG | 0.638424 | 2_3:-21917480 | Msa0284080:CDS |
| AGTGAAGCGCAGACGATACG+CGG | 0.639553 | 2_3:-21917525 | Msa0284080:CDS |
| AGGACACACTACTCTAGATG+AGG | 0.655016 | 2_3:-21918680 | Msa0284080:CDS |
| TTGTCTGATAGACGGATCGG+TGG | 0.664514 | 2_3:+21919681 | None:intergenic |
| TCTTAATAAGGTCTTCCATG+AGG | 0.672788 | 2_3:-21917489 | Msa0284080:CDS |
| GGATTATTATAAATCTACTG+AGG | 0.714422 | 2_3:-21918416 | Msa0284080:CDS |
| TTCAACACTTCTGAGCAACG+AGG | 0.719258 | 2_3:+21917617 | None:intergenic |
| TTGTTGTACCTAGAAAACCG+AGG | 0.809311 | 2_3:-21918268 | Msa0284080:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAATTAATTTAACTAAA+AGG | + | chr2_3:21918135-21918154 | None:intergenic | 10.0% |
| !! | ATGAAATTAATTTAACTAAA+AGG | + | chr2_3:21918135-21918154 | None:intergenic | 10.0% |
| !! | AAAGTTAAAGTAATTTCATA+GGG | - | chr2_3:21917989-21918008 | Msa0284080:CDS | 15.0% |
| !!! | AAGATTTTTATGATTTACAT+CGG | + | chr2_3:21918625-21918644 | None:intergenic | 15.0% |
| !! | ATGTAAATCATAAAAATCTT+AGG | - | chr2_3:21918625-21918644 | Msa0284080:CDS | 15.0% |
| !! | TGTAAATCATAAAAATCTTA+GGG | - | chr2_3:21918626-21918645 | Msa0284080:CDS | 15.0% |
| !!! | AACAAAGATACAATAATTTT+CGG | + | chr2_3:21918690-21918709 | None:intergenic | 15.0% |
| !!! | CATTTTAGATTTAAATACAA+TGG | + | chr2_3:21919381-21919400 | None:intergenic | 15.0% |
| !! | AGCAAAATTTAACAAATAAA+TGG | + | chr2_3:21919503-21919522 | None:intergenic | 15.0% |
| !! | AAAGTTAAAGTAATTTCATA+GGG | - | chr2_3:21917989-21918008 | Msa0284080:CDS | 15.0% |
| !!! | AAGATTTTTATGATTTACAT+CGG | + | chr2_3:21918625-21918644 | None:intergenic | 15.0% |
| !! | ATGTAAATCATAAAAATCTT+AGG | - | chr2_3:21918625-21918644 | Msa0284080:CDS | 15.0% |
| !! | TGTAAATCATAAAAATCTTA+GGG | - | chr2_3:21918626-21918645 | Msa0284080:CDS | 15.0% |
| !!! | AACAAAGATACAATAATTTT+CGG | + | chr2_3:21918690-21918709 | None:intergenic | 15.0% |
| !!! | CATTTTAGATTTAAATACAA+TGG | + | chr2_3:21919381-21919400 | None:intergenic | 15.0% |
| !! | AGCAAAATTTAACAAATAAA+TGG | + | chr2_3:21919503-21919522 | None:intergenic | 15.0% |
| !!! | TTTCTTTAAGGATGTTTTTA+AGG | - | chr2_3:21917663-21917682 | Msa0284080:intron | 20.0% |
| !!! | TTCTTTAAGGATGTTTTTAA+GGG | - | chr2_3:21917664-21917683 | Msa0284080:intron | 20.0% |
| !! | GAAAGTTAAAGTAATTTCAT+AGG | - | chr2_3:21917988-21918007 | Msa0284080:CDS | 20.0% |
| !! | AAGTTAAAGTAATTTCATAG+GGG | - | chr2_3:21917990-21918009 | Msa0284080:CDS | 20.0% |
| !! | TAATTTAACTAAAAGGTCAT+AGG | + | chr2_3:21918128-21918147 | None:intergenic | 20.0% |
| !! | ACTAAACATTCTTGATAAAA+TGG | - | chr2_3:21918221-21918240 | Msa0284080:intron | 20.0% |
| !! | TATATTACTTGTTTCACTAT+AGG | + | chr2_3:21918384-21918403 | None:intergenic | 20.0% |
| !! | GTAAATCATAAAAATCTTAG+GGG | - | chr2_3:21918627-21918646 | Msa0284080:CDS | 20.0% |
| !!! | TTCTTTTTTTTCGATAAATG+TGG | - | chr2_3:21919003-21919022 | Msa0284080:intron | 20.0% |
| !! | TCAACATTTATTGTGAAATT+CGG | + | chr2_3:21919064-21919083 | None:intergenic | 20.0% |
| !! | TCAAAAATAAAACGAAAGAT+GGG | + | chr2_3:21919316-21919335 | None:intergenic | 20.0% |
| !! | GTAAAGAAAGAAAAATAGAA+TGG | + | chr2_3:21919407-21919426 | None:intergenic | 20.0% |
| !! | TTTCATTATACGTTAGATAT+CGG | - | chr2_3:21919474-21919493 | Msa0284080:CDS | 20.0% |
| !!! | TTTCTTTAAGGATGTTTTTA+AGG | - | chr2_3:21917663-21917682 | Msa0284080:intron | 20.0% |
| !!! | TTCTTTAAGGATGTTTTTAA+GGG | - | chr2_3:21917664-21917683 | Msa0284080:intron | 20.0% |
| !! | GAAAGTTAAAGTAATTTCAT+AGG | - | chr2_3:21917988-21918007 | Msa0284080:CDS | 20.0% |
| !! | AAGTTAAAGTAATTTCATAG+GGG | - | chr2_3:21917990-21918009 | Msa0284080:CDS | 20.0% |
| !! | TAATTTAACTAAAAGGTCAT+AGG | + | chr2_3:21918128-21918147 | None:intergenic | 20.0% |
| !! | ACTAAACATTCTTGATAAAA+TGG | - | chr2_3:21918221-21918240 | Msa0284080:intron | 20.0% |
| !! | TATATTACTTGTTTCACTAT+AGG | + | chr2_3:21918384-21918403 | None:intergenic | 20.0% |
| !! | GTAAATCATAAAAATCTTAG+GGG | - | chr2_3:21918627-21918646 | Msa0284080:CDS | 20.0% |
| !!! | TTCTTTTTTTTCGATAAATG+TGG | - | chr2_3:21919003-21919022 | Msa0284080:intron | 20.0% |
| !! | TCAACATTTATTGTGAAATT+CGG | + | chr2_3:21919064-21919083 | None:intergenic | 20.0% |
| !! | TCAAAAATAAAACGAAAGAT+GGG | + | chr2_3:21919316-21919335 | None:intergenic | 20.0% |
| !! | GTAAAGAAAGAAAAATAGAA+TGG | + | chr2_3:21919407-21919426 | None:intergenic | 20.0% |
| !! | TTTCATTATACGTTAGATAT+CGG | - | chr2_3:21919474-21919493 | Msa0284080:CDS | 20.0% |
| ! | AACCAATTCAGAAATTTGAA+AGG | + | chr2_3:21917908-21917927 | None:intergenic | 25.0% |
| ! | ATATACAAACGCAAACAATT+AGG | - | chr2_3:21918399-21918418 | Msa0284080:CDS | 25.0% |
| ! | ATGTTTGTCTAGAAGATTTA+CGG | + | chr2_3:21918442-21918461 | None:intergenic | 25.0% |
| ! | TATTGTATCTTTGTTAACGA+AGG | - | chr2_3:21918695-21918714 | Msa0284080:CDS | 25.0% |
| ! | ATTGTATCTTTGTTAACGAA+GGG | - | chr2_3:21918696-21918715 | Msa0284080:CDS | 25.0% |
| ! | GGATTATTATAAATCTACTG+AGG | - | chr2_3:21918791-21918810 | Msa0284080:CDS | 25.0% |
| ! | TATTATAAATCTACTGAGGA+AGG | - | chr2_3:21918795-21918814 | Msa0284080:CDS | 25.0% |
| ! | CAACATTTATTGTGAAATTC+GGG | + | chr2_3:21919063-21919082 | None:intergenic | 25.0% |
| !!! | TGCTCCTCTTTTATTTTAAA+TGG | + | chr2_3:21919244-21919263 | None:intergenic | 25.0% |
| ! | CTCAAAAATAAAACGAAAGA+TGG | + | chr2_3:21919317-21919336 | None:intergenic | 25.0% |
| ! | TTTCTTTACTTGTATCTATC+TGG | - | chr2_3:21919418-21919437 | Msa0284080:CDS | 25.0% |
| ! | GTTCGAAAACAATTGATATA+GGG | - | chr2_3:21919445-21919464 | Msa0284080:CDS | 25.0% |
| ! | ATCTAACGTATAATGAAAAC+TGG | + | chr2_3:21919472-21919491 | None:intergenic | 25.0% |
| ! | AACCAATTCAGAAATTTGAA+AGG | + | chr2_3:21917908-21917927 | None:intergenic | 25.0% |
| ! | ATATACAAACGCAAACAATT+AGG | - | chr2_3:21918399-21918418 | Msa0284080:CDS | 25.0% |
| ! | ATGTTTGTCTAGAAGATTTA+CGG | + | chr2_3:21918442-21918461 | None:intergenic | 25.0% |
| ! | TATTGTATCTTTGTTAACGA+AGG | - | chr2_3:21918695-21918714 | Msa0284080:CDS | 25.0% |
| ! | ATTGTATCTTTGTTAACGAA+GGG | - | chr2_3:21918696-21918715 | Msa0284080:CDS | 25.0% |
| ! | GGATTATTATAAATCTACTG+AGG | - | chr2_3:21918791-21918810 | Msa0284080:CDS | 25.0% |
| ! | TATTATAAATCTACTGAGGA+AGG | - | chr2_3:21918795-21918814 | Msa0284080:CDS | 25.0% |
| ! | CAACATTTATTGTGAAATTC+GGG | + | chr2_3:21919063-21919082 | None:intergenic | 25.0% |
| !!! | TGCTCCTCTTTTATTTTAAA+TGG | + | chr2_3:21919244-21919263 | None:intergenic | 25.0% |
| ! | CTCAAAAATAAAACGAAAGA+TGG | + | chr2_3:21919317-21919336 | None:intergenic | 25.0% |
| ! | TTTCTTTACTTGTATCTATC+TGG | - | chr2_3:21919418-21919437 | Msa0284080:CDS | 25.0% |
| ! | GTTCGAAAACAATTGATATA+GGG | - | chr2_3:21919445-21919464 | Msa0284080:CDS | 25.0% |
| ! | ATCTAACGTATAATGAAAAC+TGG | + | chr2_3:21919472-21919491 | None:intergenic | 25.0% |
| AAGCTATATTGTCTGATAGA+CGG | + | chr2_3:21917537-21917556 | None:intergenic | 30.0% | |
| TGACTAAGGATTATGATGTT+GGG | - | chr2_3:21917719-21917738 | Msa0284080:intron | 30.0% | |
| TAAAGATGTTTGTGTTTGTG+TGG | - | chr2_3:21917810-21917829 | Msa0284080:intron | 30.0% | |
| GATGATGATTGTTTACACTT+TGG | - | chr2_3:21917832-21917851 | Msa0284080:intron | 30.0% | |
| ATTGTTTACACTTTGGTTGT+TGG | - | chr2_3:21917839-21917858 | Msa0284080:intron | 30.0% | |
| CACCTTTCAAATTTCTGAAT+TGG | - | chr2_3:21917903-21917922 | Msa0284080:intron | 30.0% | |
| !! | TAGTTGATTTGATTACTTGC+AGG | - | chr2_3:21918191-21918210 | Msa0284080:intron | 30.0% |
| CATGTGATAAACTACTAACA+AGG | - | chr2_3:21918295-21918314 | Msa0284080:CDS | 30.0% | |
| ! | ATCTAAAGCTCTATGTATTC+TGG | + | chr2_3:21918469-21918488 | None:intergenic | 30.0% |
| GAACATGTAAGAAAATACCT+CGG | + | chr2_3:21918959-21918978 | None:intergenic | 30.0% | |
| !! | ACGATTCATTGTTTTTCAGT+TGG | - | chr2_3:21919091-21919110 | Msa0284080:intron | 30.0% |
| ATGGATATCAATCCAATTGA+TGG | - | chr2_3:21919154-21919173 | Msa0284080:intron | 30.0% | |
| ATCTGAATTTACTCCGAATT+TGG | - | chr2_3:21919180-21919199 | Msa0284080:intron | 30.0% | |
| TCTGAATTTACTCCGAATTT+GGG | - | chr2_3:21919181-21919200 | Msa0284080:intron | 30.0% | |
| ! | GGCACCATTTAAAATAAAAG+AGG | - | chr2_3:21919237-21919256 | Msa0284080:intron | 30.0% |
| !! | TAAAAGAGGAGCATCTAATT+CGG | - | chr2_3:21919251-21919270 | Msa0284080:intron | 30.0% |
| AGTACTTTCTTAAAAGTCGA+AGG | - | chr2_3:21919335-21919354 | Msa0284080:CDS | 30.0% | |
| TTACTTGTATCTATCTGGTT+CGG | - | chr2_3:21919423-21919442 | Msa0284080:CDS | 30.0% | |
| GGTTCGAAAACAATTGATAT+AGG | - | chr2_3:21919444-21919463 | Msa0284080:CDS | 30.0% | |
| GCTACAAGAAGTTCTTAATA+AGG | - | chr2_3:21919706-21919725 | Msa0284080:CDS | 30.0% | |
| AAAGAGGAGTTTGATAAATC+TGG | - | chr2_3:21919743-21919762 | Msa0284080:CDS | 30.0% | |
| AAGCTATATTGTCTGATAGA+CGG | + | chr2_3:21917537-21917556 | None:intergenic | 30.0% | |
| TGACTAAGGATTATGATGTT+GGG | - | chr2_3:21917719-21917738 | Msa0284080:intron | 30.0% | |
| TAAAGATGTTTGTGTTTGTG+TGG | - | chr2_3:21917810-21917829 | Msa0284080:intron | 30.0% | |
| GATGATGATTGTTTACACTT+TGG | - | chr2_3:21917832-21917851 | Msa0284080:intron | 30.0% | |
| ATTGTTTACACTTTGGTTGT+TGG | - | chr2_3:21917839-21917858 | Msa0284080:intron | 30.0% | |
| CACCTTTCAAATTTCTGAAT+TGG | - | chr2_3:21917903-21917922 | Msa0284080:intron | 30.0% | |
| !! | TAGTTGATTTGATTACTTGC+AGG | - | chr2_3:21918191-21918210 | Msa0284080:intron | 30.0% |
| CATGTGATAAACTACTAACA+AGG | - | chr2_3:21918295-21918314 | Msa0284080:CDS | 30.0% | |
| ! | ATCTAAAGCTCTATGTATTC+TGG | + | chr2_3:21918469-21918488 | None:intergenic | 30.0% |
| GAACATGTAAGAAAATACCT+CGG | + | chr2_3:21918959-21918978 | None:intergenic | 30.0% | |
| !! | ACGATTCATTGTTTTTCAGT+TGG | - | chr2_3:21919091-21919110 | Msa0284080:intron | 30.0% |
| ATGGATATCAATCCAATTGA+TGG | - | chr2_3:21919154-21919173 | Msa0284080:intron | 30.0% | |
| ATCTGAATTTACTCCGAATT+TGG | - | chr2_3:21919180-21919199 | Msa0284080:intron | 30.0% | |
| TCTGAATTTACTCCGAATTT+GGG | - | chr2_3:21919181-21919200 | Msa0284080:intron | 30.0% | |
| ! | GGCACCATTTAAAATAAAAG+AGG | - | chr2_3:21919237-21919256 | Msa0284080:intron | 30.0% |
| !! | TAAAAGAGGAGCATCTAATT+CGG | - | chr2_3:21919251-21919270 | Msa0284080:intron | 30.0% |
| AGTACTTTCTTAAAAGTCGA+AGG | - | chr2_3:21919335-21919354 | Msa0284080:CDS | 30.0% | |
| TTACTTGTATCTATCTGGTT+CGG | - | chr2_3:21919423-21919442 | Msa0284080:CDS | 30.0% | |
| GGTTCGAAAACAATTGATAT+AGG | - | chr2_3:21919444-21919463 | Msa0284080:CDS | 30.0% | |
| GCTACAAGAAGTTCTTAATA+AGG | - | chr2_3:21919706-21919725 | Msa0284080:CDS | 30.0% | |
| AAAGAGGAGTTTGATAAATC+TGG | - | chr2_3:21919743-21919762 | Msa0284080:CDS | 30.0% | |
| GAAGTAGTGATAGCTGAATT+TGG | + | chr2_3:21917481-21917500 | None:intergenic | 35.0% | |
| ATATTGTCTGATAGACGGAT+CGG | + | chr2_3:21917532-21917551 | None:intergenic | 35.0% | |
| GTGACTAAGGATTATGATGT+TGG | - | chr2_3:21917718-21917737 | Msa0284080:intron | 35.0% | |
| GTTCTGCGTTATTTGTATAG+TGG | - | chr2_3:21917760-21917779 | Msa0284080:intron | 35.0% | |
| TGAAGCATGAAATCAACAAC+AGG | + | chr2_3:21917865-21917884 | None:intergenic | 35.0% | |
| TGAATTGGTTGCTCTTTATC+AGG | - | chr2_3:21917918-21917937 | Msa0284080:intron | 35.0% | |
| !! | CCATTTTGCTTTATTGTACG+CGG | - | chr2_3:21918058-21918077 | Msa0284080:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr2_3:21918084-21918103 | Msa0284080:CDS | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr2_3:21918089-21918108 | None:intergenic | 35.0% | |
| AATGGCAATAGATGACATGT+TGG | - | chr2_3:21918239-21918258 | Msa0284080:intron | 35.0% | |
| CTTTCTATAGCAAACGTTTG+TGG | - | chr2_3:21918267-21918286 | Msa0284080:intron | 35.0% | |
| !!! | AGGTAGTGATTTTTCAAGAG+TGG | + | chr2_3:21918358-21918377 | None:intergenic | 35.0% |
| ACTTGTTTCACTATAGGTTG+AGG | + | chr2_3:21918378-21918397 | None:intergenic | 35.0% | |
| TAAATCTACTGAGGAAGGAA+AGG | - | chr2_3:21918800-21918819 | Msa0284080:CDS | 35.0% | |
| TCGATTGTGTATCGAGATAT+TGG | - | chr2_3:21918836-21918855 | Msa0284080:CDS | 35.0% | |
| ! | AGAAAATACCTCGGTTTTCT+AGG | + | chr2_3:21918950-21918969 | None:intergenic | 35.0% |
| !! | AGCAAAACTTTTGTTTCCGA+TGG | - | chr2_3:21919117-21919136 | Msa0284080:intron | 35.0% |
| AATTCAGATGTGCCATCAAT+TGG | + | chr2_3:21919169-21919188 | None:intergenic | 35.0% | |
| ! | ATTTTTGTCATCTTGAGCAG+TGG | - | chr2_3:21919547-21919566 | Msa0284080:CDS | 35.0% |
| !! | AGAAGTGTTGAACAAGATCA+TGG | - | chr2_3:21919601-21919620 | Msa0284080:CDS | 35.0% |
| TCTTAATAAGGTCTTCCATG+AGG | - | chr2_3:21919718-21919737 | Msa0284080:CDS | 35.0% | |
| GAAGTAGTGATAGCTGAATT+TGG | + | chr2_3:21917481-21917500 | None:intergenic | 35.0% | |
| ATATTGTCTGATAGACGGAT+CGG | + | chr2_3:21917532-21917551 | None:intergenic | 35.0% | |
| GTGACTAAGGATTATGATGT+TGG | - | chr2_3:21917718-21917737 | Msa0284080:intron | 35.0% | |
| GTTCTGCGTTATTTGTATAG+TGG | - | chr2_3:21917760-21917779 | Msa0284080:intron | 35.0% | |
| TGAAGCATGAAATCAACAAC+AGG | + | chr2_3:21917865-21917884 | None:intergenic | 35.0% | |
| TGAATTGGTTGCTCTTTATC+AGG | - | chr2_3:21917918-21917937 | Msa0284080:intron | 35.0% | |
| !! | CCATTTTGCTTTATTGTACG+CGG | - | chr2_3:21918058-21918077 | Msa0284080:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr2_3:21918084-21918103 | Msa0284080:CDS | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr2_3:21918089-21918108 | None:intergenic | 35.0% | |
| AATGGCAATAGATGACATGT+TGG | - | chr2_3:21918239-21918258 | Msa0284080:intron | 35.0% | |
| CTTTCTATAGCAAACGTTTG+TGG | - | chr2_3:21918267-21918286 | Msa0284080:intron | 35.0% | |
| !!! | AGGTAGTGATTTTTCAAGAG+TGG | + | chr2_3:21918358-21918377 | None:intergenic | 35.0% |
| ACTTGTTTCACTATAGGTTG+AGG | + | chr2_3:21918378-21918397 | None:intergenic | 35.0% | |
| TAAATCTACTGAGGAAGGAA+AGG | - | chr2_3:21918800-21918819 | Msa0284080:CDS | 35.0% | |
| TCGATTGTGTATCGAGATAT+TGG | - | chr2_3:21918836-21918855 | Msa0284080:CDS | 35.0% | |
| ! | AGAAAATACCTCGGTTTTCT+AGG | + | chr2_3:21918950-21918969 | None:intergenic | 35.0% |
| !! | AGCAAAACTTTTGTTTCCGA+TGG | - | chr2_3:21919117-21919136 | Msa0284080:intron | 35.0% |
| AATTCAGATGTGCCATCAAT+TGG | + | chr2_3:21919169-21919188 | None:intergenic | 35.0% | |
| ! | ATTTTTGTCATCTTGAGCAG+TGG | - | chr2_3:21919547-21919566 | Msa0284080:CDS | 35.0% |
| !! | AGAAGTGTTGAACAAGATCA+TGG | - | chr2_3:21919601-21919620 | Msa0284080:CDS | 35.0% |
| TCTTAATAAGGTCTTCCATG+AGG | - | chr2_3:21919718-21919737 | Msa0284080:CDS | 35.0% | |
| AACGAAATCAGCAACAACAC+TGG | - | chr2_3:21917424-21917443 | Msa0284080:CDS | 40.0% | |
| TCTGGCAATGATCTTTGCAT+CGG | + | chr2_3:21917593-21917612 | None:intergenic | 40.0% | |
| TGCGAGGAGTAGTTTCTTTA+AGG | - | chr2_3:21917651-21917670 | Msa0284080:intron | 40.0% | |
| CCGCGTACAATAAAGCAAAA+TGG | + | chr2_3:21918061-21918080 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr2_3:21918090-21918109 | None:intergenic | 40.0% | |
| AAGGTCATAGGTTCAAGTCT+CGG | + | chr2_3:21918116-21918135 | None:intergenic | 40.0% | |
| CAGATGATGTAGAGTTAGCA+AGG | - | chr2_3:21918490-21918509 | Msa0284080:CDS | 40.0% | |
| !!! | GCAAGGTTGCTTTTGAAAGA+AGG | - | chr2_3:21918507-21918526 | Msa0284080:CDS | 40.0% |
| AAGATCAAGAAGCTCAGTAG+TGG | + | chr2_3:21918595-21918614 | None:intergenic | 40.0% | |
| ACTACTGAGCTTCTTGATCT+TGG | - | chr2_3:21918594-21918613 | Msa0284080:CDS | 40.0% | |
| TTGTTGTACCTAGAAAACCG+AGG | - | chr2_3:21918939-21918958 | Msa0284080:CDS | 40.0% | |
| TTCGGGAGTAACATATGTCA+AGG | + | chr2_3:21919046-21919065 | None:intergenic | 40.0% | |
| TTTGTTTCCGATGGAAGCAA+AGG | - | chr2_3:21919126-21919145 | Msa0284080:intron | 40.0% | |
| ATCACAACCTTTGCTTCCAT+CGG | + | chr2_3:21919136-21919155 | None:intergenic | 40.0% | |
| GAATTTACTCCGAATTTGGG+TGG | - | chr2_3:21919184-21919203 | Msa0284080:intron | 40.0% | |
| GACAACTATGGACTTGAATG+AGG | - | chr2_3:21919216-21919235 | Msa0284080:intron | 40.0% | |
| !! | ATGAAGGCATTATCTAGAGC+AGG | - | chr2_3:21919274-21919293 | Msa0284080:intron | 40.0% |
| CACGTCAATAGGAAAGTCAA+GGG | - | chr2_3:21919787-21919806 | Msa0284080:CDS | 40.0% | |
| AACGAAATCAGCAACAACAC+TGG | - | chr2_3:21917424-21917443 | Msa0284080:CDS | 40.0% | |
| TCTGGCAATGATCTTTGCAT+CGG | + | chr2_3:21917593-21917612 | None:intergenic | 40.0% | |
| TGCGAGGAGTAGTTTCTTTA+AGG | - | chr2_3:21917651-21917670 | Msa0284080:intron | 40.0% | |
| CCGCGTACAATAAAGCAAAA+TGG | + | chr2_3:21918061-21918080 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr2_3:21918090-21918109 | None:intergenic | 40.0% | |
| AAGGTCATAGGTTCAAGTCT+CGG | + | chr2_3:21918116-21918135 | None:intergenic | 40.0% | |
| CAGATGATGTAGAGTTAGCA+AGG | - | chr2_3:21918490-21918509 | Msa0284080:CDS | 40.0% | |
| !!! | GCAAGGTTGCTTTTGAAAGA+AGG | - | chr2_3:21918507-21918526 | Msa0284080:CDS | 40.0% |
| AAGATCAAGAAGCTCAGTAG+TGG | + | chr2_3:21918595-21918614 | None:intergenic | 40.0% | |
| ACTACTGAGCTTCTTGATCT+TGG | - | chr2_3:21918594-21918613 | Msa0284080:CDS | 40.0% | |
| TTGTTGTACCTAGAAAACCG+AGG | - | chr2_3:21918939-21918958 | Msa0284080:CDS | 40.0% | |
| TTCGGGAGTAACATATGTCA+AGG | + | chr2_3:21919046-21919065 | None:intergenic | 40.0% | |
| TTTGTTTCCGATGGAAGCAA+AGG | - | chr2_3:21919126-21919145 | Msa0284080:intron | 40.0% | |
| ATCACAACCTTTGCTTCCAT+CGG | + | chr2_3:21919136-21919155 | None:intergenic | 40.0% | |
| GAATTTACTCCGAATTTGGG+TGG | - | chr2_3:21919184-21919203 | Msa0284080:intron | 40.0% | |
| GACAACTATGGACTTGAATG+AGG | - | chr2_3:21919216-21919235 | Msa0284080:intron | 40.0% | |
| !! | ATGAAGGCATTATCTAGAGC+AGG | - | chr2_3:21919274-21919293 | Msa0284080:intron | 40.0% |
| CACGTCAATAGGAAAGTCAA+GGG | - | chr2_3:21919787-21919806 | Msa0284080:CDS | 40.0% | |
| GCAAAGATCATTGCCAGAGA+TGG | - | chr2_3:21917595-21917614 | Msa0284080:CDS | 45.0% | |
| AGAAACTTCTCGACCATCTC+TGG | + | chr2_3:21917611-21917630 | None:intergenic | 45.0% | |
| AGAAACGATGCTGCAACTGA+AGG | - | chr2_3:21917693-21917712 | Msa0284080:intron | 45.0% | |
| GCAACTGAAGGAAGTGACTA+AGG | - | chr2_3:21917705-21917724 | Msa0284080:intron | 45.0% | |
| GGCAATAGATGACATGTTGG+TGG | - | chr2_3:21918242-21918261 | Msa0284080:intron | 45.0% | |
| AGGACACACTACTCTAGATG+AGG | - | chr2_3:21918527-21918546 | Msa0284080:CDS | 45.0% | |
| CCATCGAAAGTGAGTTCAGA+AGG | + | chr2_3:21918729-21918748 | None:intergenic | 45.0% | |
| CCTTCTGAACTCACTTTCGA+TGG | - | chr2_3:21918726-21918745 | Msa0284080:CDS | 45.0% | |
| AAAGCGTAGTACGAAAGCTG+TGG | - | chr2_3:21918770-21918789 | Msa0284080:CDS | 45.0% | |
| TATTGGAGCAAGCTGAGAGA+AGG | - | chr2_3:21918853-21918872 | Msa0284080:CDS | 45.0% | |
| ATTGGAGCAAGCTGAGAGAA+GGG | - | chr2_3:21918854-21918873 | Msa0284080:CDS | 45.0% | |
| AGAGATGCCTCACCATGTAA+AGG | + | chr2_3:21918882-21918901 | None:intergenic | 45.0% | |
| GGCATCTCTTTCTCTTGCTA+AGG | - | chr2_3:21918893-21918912 | Msa0284080:CDS | 45.0% | |
| TCTCTTTCTCTTGCTAAGGC+AGG | - | chr2_3:21918897-21918916 | Msa0284080:CDS | 45.0% | |
| CTCTTTCTCTTGCTAAGGCA+GGG | - | chr2_3:21918898-21918917 | Msa0284080:CDS | 45.0% | |
| TCTTTCTCTTGCTAAGGCAG+GGG | - | chr2_3:21918899-21918918 | Msa0284080:CDS | 45.0% | |
| GATGGAAGCAAAGGTTGTGA+TGG | - | chr2_3:21919135-21919154 | Msa0284080:intron | 45.0% | |
| CTCTGGTAACCACCCAAATT+CGG | + | chr2_3:21919196-21919215 | None:intergenic | 45.0% | |
| TGGTTACCAGAGGACAACTA+TGG | - | chr2_3:21919204-21919223 | Msa0284080:intron | 45.0% | |
| TCAAGTCCATAGTTGTCCTC+TGG | + | chr2_3:21919213-21919232 | None:intergenic | 45.0% | |
| ! | GGAGCATCTAATTCGGATGA+AGG | - | chr2_3:21919258-21919277 | Msa0284080:intron | 45.0% |
| TCATCTTGAGCAGTGGAGTT+GGG | - | chr2_3:21919554-21919573 | Msa0284080:CDS | 45.0% | |
| TTCAACACTTCTGAGCAACG+AGG | + | chr2_3:21919593-21919612 | None:intergenic | 45.0% | |
| CAAACTCCTCTTTGTCCTCA+TGG | + | chr2_3:21919736-21919755 | None:intergenic | 45.0% | |
| TCATCCTCATCCACGTCAAT+AGG | - | chr2_3:21919776-21919795 | Msa0284080:CDS | 45.0% | |
| CTTTCCTATTGACGTGGATG+AGG | + | chr2_3:21919783-21919802 | None:intergenic | 45.0% | |
| CCTTGACTTTCCTATTGACG+TGG | + | chr2_3:21919789-21919808 | None:intergenic | 45.0% | |
| CCACGTCAATAGGAAAGTCA+AGG | - | chr2_3:21919786-21919805 | Msa0284080:CDS | 45.0% | |
| GCAAAGATCATTGCCAGAGA+TGG | - | chr2_3:21917595-21917614 | Msa0284080:CDS | 45.0% | |
| AGAAACTTCTCGACCATCTC+TGG | + | chr2_3:21917611-21917630 | None:intergenic | 45.0% | |
| AGAAACGATGCTGCAACTGA+AGG | - | chr2_3:21917693-21917712 | Msa0284080:intron | 45.0% | |
| GCAACTGAAGGAAGTGACTA+AGG | - | chr2_3:21917705-21917724 | Msa0284080:intron | 45.0% | |
| GGCAATAGATGACATGTTGG+TGG | - | chr2_3:21918242-21918261 | Msa0284080:intron | 45.0% | |
| AGGACACACTACTCTAGATG+AGG | - | chr2_3:21918527-21918546 | Msa0284080:CDS | 45.0% | |
| CCATCGAAAGTGAGTTCAGA+AGG | + | chr2_3:21918729-21918748 | None:intergenic | 45.0% | |
| CCTTCTGAACTCACTTTCGA+TGG | - | chr2_3:21918726-21918745 | Msa0284080:CDS | 45.0% | |
| AAAGCGTAGTACGAAAGCTG+TGG | - | chr2_3:21918770-21918789 | Msa0284080:CDS | 45.0% | |
| TATTGGAGCAAGCTGAGAGA+AGG | - | chr2_3:21918853-21918872 | Msa0284080:CDS | 45.0% | |
| ATTGGAGCAAGCTGAGAGAA+GGG | - | chr2_3:21918854-21918873 | Msa0284080:CDS | 45.0% | |
| AGAGATGCCTCACCATGTAA+AGG | + | chr2_3:21918882-21918901 | None:intergenic | 45.0% | |
| GGCATCTCTTTCTCTTGCTA+AGG | - | chr2_3:21918893-21918912 | Msa0284080:CDS | 45.0% | |
| TCTCTTTCTCTTGCTAAGGC+AGG | - | chr2_3:21918897-21918916 | Msa0284080:CDS | 45.0% | |
| CTCTTTCTCTTGCTAAGGCA+GGG | - | chr2_3:21918898-21918917 | Msa0284080:CDS | 45.0% | |
| TCTTTCTCTTGCTAAGGCAG+GGG | - | chr2_3:21918899-21918918 | Msa0284080:CDS | 45.0% | |
| GATGGAAGCAAAGGTTGTGA+TGG | - | chr2_3:21919135-21919154 | Msa0284080:intron | 45.0% | |
| CTCTGGTAACCACCCAAATT+CGG | + | chr2_3:21919196-21919215 | None:intergenic | 45.0% | |
| TGGTTACCAGAGGACAACTA+TGG | - | chr2_3:21919204-21919223 | Msa0284080:intron | 45.0% | |
| TCAAGTCCATAGTTGTCCTC+TGG | + | chr2_3:21919213-21919232 | None:intergenic | 45.0% | |
| ! | GGAGCATCTAATTCGGATGA+AGG | - | chr2_3:21919258-21919277 | Msa0284080:intron | 45.0% |
| TCATCTTGAGCAGTGGAGTT+GGG | - | chr2_3:21919554-21919573 | Msa0284080:CDS | 45.0% | |
| TTCAACACTTCTGAGCAACG+AGG | + | chr2_3:21919593-21919612 | None:intergenic | 45.0% | |
| CAAACTCCTCTTTGTCCTCA+TGG | + | chr2_3:21919736-21919755 | None:intergenic | 45.0% | |
| TCATCCTCATCCACGTCAAT+AGG | - | chr2_3:21919776-21919795 | Msa0284080:CDS | 45.0% | |
| CTTTCCTATTGACGTGGATG+AGG | + | chr2_3:21919783-21919802 | None:intergenic | 45.0% | |
| CCTTGACTTTCCTATTGACG+TGG | + | chr2_3:21919789-21919808 | None:intergenic | 45.0% | |
| CCACGTCAATAGGAAAGTCA+AGG | - | chr2_3:21919786-21919805 | Msa0284080:CDS | 45.0% | |
| TTGTCTGATAGACGGATCGG+TGG | + | chr2_3:21917529-21917548 | None:intergenic | 50.0% | |
| GTCGAGAAGTTTCTGTGCAC+CGG | - | chr2_3:21917617-21917636 | Msa0284080:CDS | 50.0% | |
| TCCTCGCAGACAAAATGCAC+CGG | + | chr2_3:21917639-21917658 | None:intergenic | 50.0% | |
| !!! | CTGCCTAGTTTTAGTGCACG+GGG | + | chr2_3:21918019-21918038 | None:intergenic | 50.0% |
| !!! | CCTGCCTAGTTTTAGTGCAC+GGG | + | chr2_3:21918020-21918039 | None:intergenic | 50.0% |
| !!! | CCCTGCCTAGTTTTAGTGCA+CGG | + | chr2_3:21918021-21918040 | None:intergenic | 50.0% |
| CCGTGCACTAAAACTAGGCA+GGG | - | chr2_3:21918018-21918037 | Msa0284080:CDS | 50.0% | |
| AAAATGGTGAGACCCCTTGC+AGG | + | chr2_3:21918045-21918064 | None:intergenic | 50.0% | |
| GAGAGAAGGGAGCCTTTACA+TGG | - | chr2_3:21918867-21918886 | Msa0284080:CDS | 50.0% | |
| AAGGGAGCCTTTACATGGTG+AGG | - | chr2_3:21918872-21918891 | Msa0284080:CDS | 50.0% | |
| CGAATTTGGGTGGTTACCAG+AGG | - | chr2_3:21919194-21919213 | Msa0284080:intron | 50.0% | |
| GTCATCTTGAGCAGTGGAGT+TGG | - | chr2_3:21919553-21919572 | Msa0284080:CDS | 50.0% | |
| CATCTTGAGCAGTGGAGTTG+GGG | - | chr2_3:21919555-21919574 | Msa0284080:CDS | 50.0% | |
| TGCAAGCTGCGATAGGTCAT+CGG | + | chr2_3:21919630-21919649 | None:intergenic | 50.0% | |
| CTATCGCAGCTTGCATGCAT+GGG | - | chr2_3:21919635-21919654 | Msa0284080:CDS | 50.0% | |
| CGCTTCACTTGTCGATCTTC+GGG | + | chr2_3:21919671-21919690 | None:intergenic | 50.0% | |
| GCGCTTCACTTGTCGATCTT+CGG | + | chr2_3:21919672-21919691 | None:intergenic | 50.0% | |
| GGTCTTCCATGAGGACAAAG+AGG | - | chr2_3:21919727-21919746 | Msa0284080:CDS | 50.0% | |
| TTGTCTGATAGACGGATCGG+TGG | + | chr2_3:21917529-21917548 | None:intergenic | 50.0% | |
| GTCGAGAAGTTTCTGTGCAC+CGG | - | chr2_3:21917617-21917636 | Msa0284080:CDS | 50.0% | |
| TCCTCGCAGACAAAATGCAC+CGG | + | chr2_3:21917639-21917658 | None:intergenic | 50.0% | |
| !!! | CTGCCTAGTTTTAGTGCACG+GGG | + | chr2_3:21918019-21918038 | None:intergenic | 50.0% |
| !!! | CCTGCCTAGTTTTAGTGCAC+GGG | + | chr2_3:21918020-21918039 | None:intergenic | 50.0% |
| !!! | CCCTGCCTAGTTTTAGTGCA+CGG | + | chr2_3:21918021-21918040 | None:intergenic | 50.0% |
| CCGTGCACTAAAACTAGGCA+GGG | - | chr2_3:21918018-21918037 | Msa0284080:CDS | 50.0% | |
| AAAATGGTGAGACCCCTTGC+AGG | + | chr2_3:21918045-21918064 | None:intergenic | 50.0% | |
| GAGAGAAGGGAGCCTTTACA+TGG | - | chr2_3:21918867-21918886 | Msa0284080:CDS | 50.0% | |
| AAGGGAGCCTTTACATGGTG+AGG | - | chr2_3:21918872-21918891 | Msa0284080:CDS | 50.0% | |
| CGAATTTGGGTGGTTACCAG+AGG | - | chr2_3:21919194-21919213 | Msa0284080:intron | 50.0% | |
| GTCATCTTGAGCAGTGGAGT+TGG | - | chr2_3:21919553-21919572 | Msa0284080:CDS | 50.0% | |
| CATCTTGAGCAGTGGAGTTG+GGG | - | chr2_3:21919555-21919574 | Msa0284080:CDS | 50.0% | |
| TGCAAGCTGCGATAGGTCAT+CGG | + | chr2_3:21919630-21919649 | None:intergenic | 50.0% | |
| CTATCGCAGCTTGCATGCAT+GGG | - | chr2_3:21919635-21919654 | Msa0284080:CDS | 50.0% | |
| CGCTTCACTTGTCGATCTTC+GGG | + | chr2_3:21919671-21919690 | None:intergenic | 50.0% | |
| GCGCTTCACTTGTCGATCTT+CGG | + | chr2_3:21919672-21919691 | None:intergenic | 50.0% | |
| GGTCTTCCATGAGGACAAAG+AGG | - | chr2_3:21919727-21919746 | Msa0284080:CDS | 50.0% | |
| ! | ACCGGTGCATTTTGTCTGCG+AGG | - | chr2_3:21917635-21917654 | Msa0284080:CDS | 55.0% |
| CAGCCCCGTGCACTAAAACT+AGG | - | chr2_3:21918013-21918032 | Msa0284080:CDS | 55.0% | |
| CCCGTGCACTAAAACTAGGC+AGG | - | chr2_3:21918017-21918036 | Msa0284080:CDS | 55.0% | |
| AAACTAGGCAGGGTCCTGCA+AGG | - | chr2_3:21918028-21918047 | Msa0284080:CDS | 55.0% | |
| AACTAGGCAGGGTCCTGCAA+GGG | - | chr2_3:21918029-21918048 | Msa0284080:CDS | 55.0% | |
| GAGCAGTGGAGTTGGGGAAA+CGG | - | chr2_3:21919561-21919580 | Msa0284080:CDS | 55.0% | |
| CCATGCATGCAAGCTGCGAT+AGG | + | chr2_3:21919637-21919656 | None:intergenic | 55.0% | |
| CCTATCGCAGCTTGCATGCA+TGG | - | chr2_3:21919634-21919653 | Msa0284080:CDS | 55.0% | |
| AGTGAAGCGCAGACGATACG+CGG | - | chr2_3:21919682-21919701 | Msa0284080:CDS | 55.0% | |
| ! | ACCGGTGCATTTTGTCTGCG+AGG | - | chr2_3:21917635-21917654 | Msa0284080:CDS | 55.0% |
| CAGCCCCGTGCACTAAAACT+AGG | - | chr2_3:21918013-21918032 | Msa0284080:CDS | 55.0% | |
| CCCGTGCACTAAAACTAGGC+AGG | - | chr2_3:21918017-21918036 | Msa0284080:CDS | 55.0% | |
| AAACTAGGCAGGGTCCTGCA+AGG | - | chr2_3:21918028-21918047 | Msa0284080:CDS | 55.0% | |
| AACTAGGCAGGGTCCTGCAA+GGG | - | chr2_3:21918029-21918048 | Msa0284080:CDS | 55.0% | |
| GAGCAGTGGAGTTGGGGAAA+CGG | - | chr2_3:21919561-21919580 | Msa0284080:CDS | 55.0% | |
| CCATGCATGCAAGCTGCGAT+AGG | + | chr2_3:21919637-21919656 | None:intergenic | 55.0% | |
| CCTATCGCAGCTTGCATGCA+TGG | - | chr2_3:21919634-21919653 | Msa0284080:CDS | 55.0% | |
| AGTGAAGCGCAGACGATACG+CGG | - | chr2_3:21919682-21919701 | Msa0284080:CDS | 55.0% | |
| ACTAGGCAGGGTCCTGCAAG+GGG | - | chr2_3:21918030-21918049 | Msa0284080:CDS | 60.0% | |
| ACTAGGCAGGGTCCTGCAAG+GGG | - | chr2_3:21918030-21918049 | Msa0284080:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 21917388 | 21919841 | 21917388 | ID=Msa0284080;Name=Msa0284080 |
| chr2_3 | mRNA | 21917388 | 21919841 | 21917388 | ID=Msa0284080-mRNA-1;Parent=Msa0284080;Name=Msa0284080-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|4|0|586 |
| chr2_3 | exon | 21919290 | 21919841 | 21919290 | ID=Msa0284080-mRNA-1:exon:8586;Parent=Msa0284080-mRNA-1 |
| chr2_3 | exon | 21918269 | 21919016 | 21918269 | ID=Msa0284080-mRNA-1:exon:8585;Parent=Msa0284080-mRNA-1 |
| chr2_3 | exon | 21917934 | 21918119 | 21917934 | ID=Msa0284080-mRNA-1:exon:8584;Parent=Msa0284080-mRNA-1 |
| chr2_3 | exon | 21917388 | 21917662 | 21917388 | ID=Msa0284080-mRNA-1:exon:8583;Parent=Msa0284080-mRNA-1 |
| chr2_3 | CDS | 21919290 | 21919841 | 21919290 | ID=Msa0284080-mRNA-1:cds;Parent=Msa0284080-mRNA-1 |
| chr2_3 | CDS | 21918269 | 21919016 | 21918269 | ID=Msa0284080-mRNA-1:cds;Parent=Msa0284080-mRNA-1 |
| chr2_3 | CDS | 21917934 | 21918119 | 21917934 | ID=Msa0284080-mRNA-1:cds;Parent=Msa0284080-mRNA-1 |
| chr2_3 | CDS | 21917388 | 21917662 | 21917388 | ID=Msa0284080-mRNA-1:cds;Parent=Msa0284080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
