Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284110 | QOV03064.1 | 96.928 | 586 | 18 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284110 | sp|Q5D0W8|NPR1_ORYSI | 57.401 | 554 | 199 | 8 | 50 | 576 | 36 | 579 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284110 | A0A7U3NJF6 | 96.928 | 586 | 18 | 0 | 1 | 586 | 1 | 586 | 0.0 | 1178 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0284110 | TR | TRAF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284110 | MtrunA17_Chr2g0299621 | 93.857 | 586 | 34 | 1 | 1 | 586 | 1 | 584 | 0.0 | 1080 |
| Msa0284110 | MtrunA17_Chr2g0291741 | 42.934 | 559 | 286 | 11 | 18 | 558 | 21 | 564 | 1.01e-142 | 426 |
| Msa0284110 | MtrunA17_Chr5g0442661 | 40.301 | 531 | 291 | 10 | 50 | 563 | 50 | 571 | 2.64e-122 | 373 |
| Msa0284110 | MtrunA17_Chr1g0171771 | 31.536 | 371 | 212 | 8 | 67 | 402 | 24 | 387 | 6.86e-39 | 149 |
| Msa0284110 | MtrunA17_Chr7g0256321 | 30.376 | 372 | 216 | 7 | 67 | 402 | 24 | 388 | 1.39e-36 | 142 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0284110 | AT1G64280.1 | 51.839 | 571 | 242 | 9 | 7 | 558 | 7 | 563 | 0.0 | 548 |
| Msa0284110 | AT4G26120.1 | 49.739 | 575 | 255 | 10 | 12 | 569 | 15 | 572 | 7.38e-175 | 508 |
| Msa0284110 | AT4G26120.2 | 49.739 | 575 | 255 | 10 | 12 | 569 | 16 | 573 | 8.05e-175 | 508 |
| Msa0284110 | AT5G45110.1 | 42.557 | 524 | 277 | 9 | 50 | 556 | 43 | 559 | 3.58e-122 | 373 |
| Msa0284110 | AT4G19660.1 | 40.801 | 549 | 282 | 12 | 31 | 555 | 22 | 551 | 3.86e-122 | 372 |
| Msa0284110 | AT4G19660.2 | 39.062 | 576 | 281 | 13 | 31 | 555 | 22 | 578 | 6.45e-117 | 360 |
| Msa0284110 | AT5G45110.2 | 41.754 | 479 | 255 | 9 | 50 | 514 | 43 | 511 | 7.47e-108 | 333 |
| Msa0284110 | AT3G57130.1 | 31.536 | 371 | 209 | 9 | 67 | 402 | 26 | 386 | 1.26e-39 | 151 |
| Msa0284110 | AT2G41370.1 | 29.899 | 398 | 223 | 10 | 54 | 402 | 3 | 393 | 1.89e-35 | 140 |
Find 100 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGAATTTACTCCGAATT+TGG | 0.080716 | 2_3:-21949523 | Msa0284110:CDS |
| ACTACTGAGCTTCTTGATTT+TGG | 0.125114 | 2_3:-21950101 | Msa0284110:CDS |
| TGCGAGGAGTAGTTTCTTTA+AGG | 0.142531 | 2_3:-21951044 | Msa0284110:CDS |
| ACTAAACATTCTTGATAAAA+TGG | 0.238573 | 2_3:-21950474 | Msa0284110:CDS |
| CACCTTTCAAATTTCAGAAT+TGG | 0.285690 | 2_3:-21950792 | Msa0284110:CDS |
| GCGCTTCACTTGTCGATCTT+CGG | 0.290085 | 2_3:+21949032 | None:intergenic |
| AGAATTGGTTGCTCTTTATC+AGG | 0.307238 | 2_3:-21950777 | Msa0284110:intron |
| ATGTTTGTCTAGAAGATTTA+CGG | 0.318420 | 2_3:+21950256 | None:intergenic |
| ATCTAAAGCTCTATGTATTC+TGG | 0.325893 | 2_3:+21950229 | None:intergenic |
| CGCTTCACTTGTCGATCTTC+GGG | 0.329375 | 2_3:+21949033 | None:intergenic |
| GCTACAAGAAGTTCTTAATA+AGG | 0.338445 | 2_3:-21948995 | Msa0284110:CDS |
| TCGATTGTGTATCGAGATAT+TGG | 0.362910 | 2_3:-21949859 | Msa0284110:CDS |
| TCTGAATTTACTCCGAATTT+GGG | 0.369283 | 2_3:-21949522 | Msa0284110:CDS |
| TCATCTTGAGCAGTGGAGTT+GGG | 0.376033 | 2_3:-21949147 | Msa0284110:intron |
| AATTCAGATGTGCCATCAAT+TGG | 0.381830 | 2_3:+21949537 | None:intergenic |
| AAAGAGGAGTTTGATAAATC+TGG | 0.386748 | 2_3:-21948958 | Msa0284110:CDS |
| GAAGTAGTGATAGCTGAATT+TGG | 0.388122 | 2_3:+21951217 | None:intergenic |
| GTGACTAAGGATTATGATGT+TGG | 0.390092 | 2_3:-21950977 | Msa0284110:CDS |
| TCATCCTCATCCACGTCAAT+AGG | 0.401640 | 2_3:-21948925 | Msa0284110:CDS |
| ATTGTTTACACTTTGGTTGT+TGG | 0.402392 | 2_3:-21950856 | Msa0284110:CDS |
| CTCTGGCAACCACCCAAATT+CGG | 0.404385 | 2_3:+21949510 | None:intergenic |
| CAAACTCCTCTTTGTCCTCA+TGG | 0.421934 | 2_3:+21948968 | None:intergenic |
| AGAAACTTCTCGACCATCTC+TGG | 0.426255 | 2_3:+21951087 | None:intergenic |
| TAAAAGAGGAGCATCTAATT+CGG | 0.429046 | 2_3:-21949452 | Msa0284110:CDS |
| TATATTATTTGTTTCACTAC+AGG | 0.429170 | 2_3:+21950314 | None:intergenic |
| TCTCTTTCTCTTGCTAAGGC+AGG | 0.429539 | 2_3:-21949798 | Msa0284110:CDS |
| CAGATGATGTAGAATTAGTA+AGG | 0.438766 | 2_3:-21950205 | Msa0284110:CDS |
| CTCTTTCTCTTGCTAAGGCA+GGG | 0.442710 | 2_3:-21949797 | Msa0284110:CDS |
| GTCATCTTGAGCAGTGGAGT+TGG | 0.451507 | 2_3:-21949148 | Msa0284110:intron |
| ATCATACTATTATTAGCCCT+TGG | 0.460763 | 2_3:+21948898 | None:intergenic |
| CCTATCGCAGCTCGCATGCA+TGG | 0.465300 | 2_3:-21949067 | Msa0284110:CDS |
| GGCATCTCTTTCTCTTGCTA+AGG | 0.467473 | 2_3:-21949802 | Msa0284110:CDS |
| ATGGATATCAATCCAATTGA+TGG | 0.475189 | 2_3:-21949549 | Msa0284110:CDS |
| TGACTAAGGATTATGATGTT+GGG | 0.476464 | 2_3:-21950976 | Msa0284110:CDS |
| CTTTCTATAGCAAACGTTTG+TGG | 0.477691 | 2_3:-21950428 | Msa0284110:CDS |
| ACGGTTCTTCCCTCGTTGCT+CGG | 0.483600 | 2_3:-21949121 | Msa0284110:CDS |
| TGGTTGCCAGAGGACAACTA+TGG | 0.504234 | 2_3:-21949499 | Msa0284110:CDS |
| TGAAGCATGAAATCAACAAC+GGG | 0.507862 | 2_3:+21950833 | None:intergenic |
| ATCACAACCTTTGCTTCCAT+CGG | 0.509584 | 2_3:+21949570 | None:intergenic |
| GCAACTGAAGGAAGTGACTA+AGG | 0.511330 | 2_3:-21950990 | Msa0284110:CDS |
| GAGCAGTGGAGTTGGGGAAA+CGG | 0.514130 | 2_3:-21949140 | Msa0284110:intron |
| TCTTTCTCTTGCTAAGGCAG+GGG | 0.519191 | 2_3:-21949796 | Msa0284110:CDS |
| ATTGGAGCAAGCTGAGAGAA+GGG | 0.524671 | 2_3:-21949841 | Msa0284110:CDS |
| GATGATGATTGTTTACACTT+TGG | 0.524715 | 2_3:-21950863 | Msa0284110:CDS |
| ATTGTATCTTTGTTAACGAA+GGG | 0.525145 | 2_3:-21949999 | Msa0284110:CDS |
| GTCGAGAAGTTTCTGTGCAC+CGG | 0.525175 | 2_3:-21951078 | Msa0284110:CDS |
| TCAAGTCCATAGTTGTCCTC+TGG | 0.532702 | 2_3:+21949493 | None:intergenic |
| AACCAATTCTGAAATTTGAA+AGG | 0.533170 | 2_3:+21950790 | None:intergenic |
| GGAAGTGTTGAACAAGATCA+TGG | 0.534097 | 2_3:-21949100 | Msa0284110:CDS |
| CTATCGCAGCTCGCATGCAT+GGG | 0.540766 | 2_3:-21949066 | Msa0284110:CDS |
| ATAATGATGTACTTGAGAAG+TGG | 0.540852 | 2_3:-21951310 | Msa0284110:CDS |
| TATTGGAGCAAGCTGAGAGA+AGG | 0.543360 | 2_3:-21949842 | Msa0284110:CDS |
| TATTATAAATCTACTGAGGA+AGG | 0.543578 | 2_3:-21949900 | Msa0284110:CDS |
| ATGAAGGCGTTGTCTAGAGC+AGG | 0.543907 | 2_3:-21949429 | Msa0284110:intron |
| CATTCCTATTGACGTGGATG+AGG | 0.544059 | 2_3:+21948921 | None:intergenic |
| ATATACAAACGCAAAGAACT+AGG | 0.544709 | 2_3:-21950296 | Msa0284110:CDS |
| CATCTTGAGCAGTGGAGTTG+GGG | 0.545384 | 2_3:-21949146 | Msa0284110:intron |
| TAAATCTACTGAGGAAGGAA+AGG | 0.549862 | 2_3:-21949895 | Msa0284110:CDS |
| GGCACCATTTAAAATAAAAG+AGG | 0.551112 | 2_3:-21949466 | Msa0284110:CDS |
| TATTGTATCTTTGTTAACGA+AGG | 0.551812 | 2_3:-21950000 | Msa0284110:CDS |
| CCTTCTGAACTCACTTTCGA+TGG | 0.555532 | 2_3:-21949969 | Msa0284110:CDS |
| GGAGCATCTAATTCGGATGA+AGG | 0.559886 | 2_3:-21949445 | Msa0284110:CDS |
| TGCGAGCTGCGATAGGTCAT+CGG | 0.561459 | 2_3:+21949074 | None:intergenic |
| GCAAAGATCATTGCCAGAGA+TGG | 0.562499 | 2_3:-21951100 | Msa0284110:CDS |
| AGAAACGATGCTGCAACTGA+AGG | 0.567744 | 2_3:-21951002 | Msa0284110:CDS |
| AGAGATGCCTCACCATGTAA+AGG | 0.569360 | 2_3:+21949816 | None:intergenic |
| CCATGCATGCGAGCTGCGAT+AGG | 0.569820 | 2_3:+21949067 | None:intergenic |
| GAGAGAAGGGAGCCTTTACA+TGG | 0.569857 | 2_3:-21949828 | Msa0284110:CDS |
| CCATCGAAAGTGAGTTCAGA+AGG | 0.573318 | 2_3:+21949969 | None:intergenic |
| TAAAGATGTTTGTGTTTGTG+TGG | 0.576566 | 2_3:-21950885 | Msa0284110:CDS |
| TTTGTTTCCGATGGAAGCAA+AGG | 0.576921 | 2_3:-21949577 | Msa0284110:CDS |
| GACAACTATGGACTTGAATG+AGG | 0.586182 | 2_3:-21949487 | Msa0284110:CDS |
| TCTGGCAATGATCTTTGCAT+CGG | 0.586644 | 2_3:+21951105 | None:intergenic |
| AAGCTATATTGTCTGATAGA+CGG | 0.587341 | 2_3:+21951161 | None:intergenic |
| CGAATTTGGGTGGTTGCCAG+AGG | 0.588649 | 2_3:-21949509 | Msa0284110:CDS |
| GAATTTACTCCGAATTTGGG+TGG | 0.588904 | 2_3:-21949519 | Msa0284110:CDS |
| GATGGAAGCAAAGGTTGTGA+TGG | 0.592814 | 2_3:-21949568 | Msa0284110:CDS |
| CCTTGGCATTCCTATTGACG+TGG | 0.593232 | 2_3:+21948915 | None:intergenic |
| AACGAAATCAGCAACAACAC+TGG | 0.604355 | 2_3:-21951271 | Msa0284110:CDS |
| CCACGTCAATAGGAATGCCA+AGG | 0.605123 | 2_3:-21948915 | Msa0284110:CDS |
| TCCTCGCAGACAAAATGCAC+CGG | 0.610061 | 2_3:+21951059 | None:intergenic |
| AAAGCGTAGTACGAAAGCTG+TGG | 0.616351 | 2_3:-21949925 | Msa0284110:CDS |
| AAAATCAAGAAGCTCAGTAG+TGG | 0.618055 | 2_3:+21950103 | None:intergenic |
| AAGGGAGCCTTTACATGGTG+AGG | 0.619314 | 2_3:-21949823 | Msa0284110:CDS |
| GGCAATAGATGACATGTTGG+TGG | 0.623200 | 2_3:-21950453 | Msa0284110:CDS |
| ATATTGTCTGATAGACGGAT+CGG | 0.631580 | 2_3:+21951166 | None:intergenic |
| AATGGCAATAGATGACATGT+TGG | 0.633106 | 2_3:-21950456 | Msa0284110:CDS |
| CATGTGATAAACTACTAACA+AGG | 0.637446 | 2_3:-21950400 | Msa0284110:CDS |
| GGTCTTCCATGAGGACAAAG+AGG | 0.638424 | 2_3:-21948974 | Msa0284110:CDS |
| AGTGAAGCGCAGACGATACG+CGG | 0.639553 | 2_3:-21949019 | Msa0284110:CDS |
| CACGTCAATAGGAATGCCAA+GGG | 0.650742 | 2_3:-21948914 | Msa0284110:CDS |
| GTTCTGCGTTATTTGTATAG+CGG | 0.654687 | 2_3:-21950935 | Msa0284110:CDS |
| TTGAAGCATGAAATCAACAA+CGG | 0.654728 | 2_3:+21950832 | None:intergenic |
| AGGACACACTACTCTAGATG+AGG | 0.655016 | 2_3:-21950168 | Msa0284110:CDS |
| TTGTCTGATAGACGGATCGG+TGG | 0.664514 | 2_3:+21951169 | None:intergenic |
| TCTTAATAAGGTCTTCCATG+AGG | 0.672788 | 2_3:-21948983 | Msa0284110:CDS |
| TCAACACTTCCGAGCAACGA+GGG | 0.684586 | 2_3:+21949112 | None:intergenic |
| TTCAACACTTCCGAGCAACG+AGG | 0.701823 | 2_3:+21949111 | None:intergenic |
| GGATTATTATAAATCTACTG+AGG | 0.714422 | 2_3:-21949904 | Msa0284110:CDS |
| TTGTTGTACCTAGAAAACCG+AGG | 0.809311 | 2_3:-21949756 | Msa0284110:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGAAATTAATTTAACTAAA+AGG | + | chr2_3:21949629-21949648 | None:intergenic | 10.0% |
| !! | ATGAAATTAATTTAACTAAA+AGG | + | chr2_3:21949629-21949648 | None:intergenic | 10.0% |
| !! | AAAGTTAAAGTAATTTCATA+GGG | - | chr2_3:21949483-21949502 | Msa0284110:CDS | 15.0% |
| !! | ATGTAAATCATAAAAATCTT+AGG | - | chr2_3:21950119-21950138 | Msa0284110:CDS | 15.0% |
| !! | TGTAAATCATAAAAATCTTA+GGG | - | chr2_3:21950120-21950139 | Msa0284110:CDS | 15.0% |
| !!! | AACAAAGATACAATAATTTT+CGG | + | chr2_3:21950184-21950203 | None:intergenic | 15.0% |
| !! | TCAACATTTATTATGAAATT+CGG | + | chr2_3:21950550-21950569 | None:intergenic | 15.0% |
| !!! | TTTTAGAGATTTAAATACAA+TGG | + | chr2_3:21950865-21950884 | None:intergenic | 15.0% |
| !! | TGCAAAATTTAACAAATAAA+TGG | + | chr2_3:21950989-21951008 | None:intergenic | 15.0% |
| !! | AAAGTTAAAGTAATTTCATA+GGG | - | chr2_3:21949483-21949502 | Msa0284110:CDS | 15.0% |
| !! | ATGTAAATCATAAAAATCTT+AGG | - | chr2_3:21950119-21950138 | Msa0284110:CDS | 15.0% |
| !! | TGTAAATCATAAAAATCTTA+GGG | - | chr2_3:21950120-21950139 | Msa0284110:CDS | 15.0% |
| !!! | AACAAAGATACAATAATTTT+CGG | + | chr2_3:21950184-21950203 | None:intergenic | 15.0% |
| !! | TCAACATTTATTATGAAATT+CGG | + | chr2_3:21950550-21950569 | None:intergenic | 15.0% |
| !!! | TTTTAGAGATTTAAATACAA+TGG | + | chr2_3:21950865-21950884 | None:intergenic | 15.0% |
| !! | TGCAAAATTTAACAAATAAA+TGG | + | chr2_3:21950989-21951008 | None:intergenic | 15.0% |
| !!! | TTTCTTTAAGGATGTTTTTA+AGG | - | chr2_3:21949157-21949176 | Msa0284110:intron | 20.0% |
| !!! | TTCTTTAAGGATGTTTTTAA+GGG | - | chr2_3:21949158-21949177 | Msa0284110:intron | 20.0% |
| !! | GAAAGTTAAAGTAATTTCAT+AGG | - | chr2_3:21949482-21949501 | Msa0284110:CDS | 20.0% |
| !! | AAGTTAAAGTAATTTCATAG+GGG | - | chr2_3:21949484-21949503 | Msa0284110:CDS | 20.0% |
| !! | TAATTTAACTAAAAGGTCAT+AGG | + | chr2_3:21949622-21949641 | None:intergenic | 20.0% |
| !! | ACTAAACATTCTTGATAAAA+TGG | - | chr2_3:21949715-21949734 | Msa0284110:intron | 20.0% |
| !! | TATATTATTTGTTTCACTAC+AGG | + | chr2_3:21949878-21949897 | None:intergenic | 20.0% |
| !! | GTAAATCATAAAAATCTTAG+GGG | - | chr2_3:21950121-21950140 | Msa0284110:CDS | 20.0% |
| !! | CAACATTTATTATGAAATTC+GGG | + | chr2_3:21950549-21950568 | None:intergenic | 20.0% |
| !! | TTATTTGAGAACTTTCTTAA+AGG | - | chr2_3:21950812-21950831 | Msa0284110:CDS | 20.0% |
| !! | GTAAAGAAAGAAAAATAGAA+TGG | + | chr2_3:21950893-21950912 | None:intergenic | 20.0% |
| !! | TTTCATTATACGTTAGATAT+CGG | - | chr2_3:21950960-21950979 | Msa0284110:CDS | 20.0% |
| !!! | TTTCTTTAAGGATGTTTTTA+AGG | - | chr2_3:21949157-21949176 | Msa0284110:intron | 20.0% |
| !!! | TTCTTTAAGGATGTTTTTAA+GGG | - | chr2_3:21949158-21949177 | Msa0284110:intron | 20.0% |
| !! | GAAAGTTAAAGTAATTTCAT+AGG | - | chr2_3:21949482-21949501 | Msa0284110:CDS | 20.0% |
| !! | AAGTTAAAGTAATTTCATAG+GGG | - | chr2_3:21949484-21949503 | Msa0284110:CDS | 20.0% |
| !! | TAATTTAACTAAAAGGTCAT+AGG | + | chr2_3:21949622-21949641 | None:intergenic | 20.0% |
| !! | ACTAAACATTCTTGATAAAA+TGG | - | chr2_3:21949715-21949734 | Msa0284110:intron | 20.0% |
| !! | TATATTATTTGTTTCACTAC+AGG | + | chr2_3:21949878-21949897 | None:intergenic | 20.0% |
| !! | GTAAATCATAAAAATCTTAG+GGG | - | chr2_3:21950121-21950140 | Msa0284110:CDS | 20.0% |
| !! | CAACATTTATTATGAAATTC+GGG | + | chr2_3:21950549-21950568 | None:intergenic | 20.0% |
| !! | TTATTTGAGAACTTTCTTAA+AGG | - | chr2_3:21950812-21950831 | Msa0284110:CDS | 20.0% |
| !! | GTAAAGAAAGAAAAATAGAA+TGG | + | chr2_3:21950893-21950912 | None:intergenic | 20.0% |
| !! | TTTCATTATACGTTAGATAT+CGG | - | chr2_3:21950960-21950979 | Msa0284110:CDS | 20.0% |
| !!! | AACCAATTCTGAAATTTGAA+AGG | + | chr2_3:21949402-21949421 | None:intergenic | 25.0% |
| ! | ATGTTTGTCTAGAAGATTTA+CGG | + | chr2_3:21949936-21949955 | None:intergenic | 25.0% |
| ! | TATTGTATCTTTGTTAACGA+AGG | - | chr2_3:21950189-21950208 | Msa0284110:CDS | 25.0% |
| ! | ATTGTATCTTTGTTAACGAA+GGG | - | chr2_3:21950190-21950209 | Msa0284110:CDS | 25.0% |
| ! | GGATTATTATAAATCTACTG+AGG | - | chr2_3:21950285-21950304 | Msa0284110:CDS | 25.0% |
| ! | TATTATAAATCTACTGAGGA+AGG | - | chr2_3:21950289-21950308 | Msa0284110:CDS | 25.0% |
| !!! | TGCTCCTCTTTTATTTTAAA+TGG | + | chr2_3:21950730-21950749 | None:intergenic | 25.0% |
| ! | TCTCAAATAAAACGAAAGAT+CGG | + | chr2_3:21950802-21950821 | None:intergenic | 25.0% |
| ! | TTTCTTTACTTGTATCTATC+TGG | - | chr2_3:21950904-21950923 | Msa0284110:CDS | 25.0% |
| ! | GTTCGAAAAGAATTGATATA+GGG | - | chr2_3:21950931-21950950 | Msa0284110:CDS | 25.0% |
| ! | ATCTAACGTATAATGAAAAC+TGG | + | chr2_3:21950958-21950977 | None:intergenic | 25.0% |
| !!! | AACCAATTCTGAAATTTGAA+AGG | + | chr2_3:21949402-21949421 | None:intergenic | 25.0% |
| ! | ATGTTTGTCTAGAAGATTTA+CGG | + | chr2_3:21949936-21949955 | None:intergenic | 25.0% |
| ! | TATTGTATCTTTGTTAACGA+AGG | - | chr2_3:21950189-21950208 | Msa0284110:CDS | 25.0% |
| ! | ATTGTATCTTTGTTAACGAA+GGG | - | chr2_3:21950190-21950209 | Msa0284110:CDS | 25.0% |
| ! | GGATTATTATAAATCTACTG+AGG | - | chr2_3:21950285-21950304 | Msa0284110:CDS | 25.0% |
| ! | TATTATAAATCTACTGAGGA+AGG | - | chr2_3:21950289-21950308 | Msa0284110:CDS | 25.0% |
| !!! | TGCTCCTCTTTTATTTTAAA+TGG | + | chr2_3:21950730-21950749 | None:intergenic | 25.0% |
| ! | TCTCAAATAAAACGAAAGAT+CGG | + | chr2_3:21950802-21950821 | None:intergenic | 25.0% |
| ! | TTTCTTTACTTGTATCTATC+TGG | - | chr2_3:21950904-21950923 | Msa0284110:CDS | 25.0% |
| ! | GTTCGAAAAGAATTGATATA+GGG | - | chr2_3:21950931-21950950 | Msa0284110:CDS | 25.0% |
| ! | ATCTAACGTATAATGAAAAC+TGG | + | chr2_3:21950958-21950977 | None:intergenic | 25.0% |
| AAGCTATATTGTCTGATAGA+CGG | + | chr2_3:21949031-21949050 | None:intergenic | 30.0% | |
| TGACTAAGGATTATGATGTT+GGG | - | chr2_3:21949213-21949232 | Msa0284110:intron | 30.0% | |
| TAAAGATGTTTGTGTTTGTG+TGG | - | chr2_3:21949304-21949323 | Msa0284110:intron | 30.0% | |
| GATGATGATTGTTTACACTT+TGG | - | chr2_3:21949326-21949345 | Msa0284110:intron | 30.0% | |
| ATTGTTTACACTTTGGTTGT+TGG | - | chr2_3:21949333-21949352 | Msa0284110:intron | 30.0% | |
| TTGAAGCATGAAATCAACAA+CGG | + | chr2_3:21949360-21949379 | None:intergenic | 30.0% | |
| CACCTTTCAAATTTCAGAAT+TGG | - | chr2_3:21949397-21949416 | Msa0284110:intron | 30.0% | |
| !! | TAGTTGATTTGATTACTTGC+AGG | - | chr2_3:21949685-21949704 | Msa0284110:intron | 30.0% |
| CATGTGATAAACTACTAACA+AGG | - | chr2_3:21949789-21949808 | Msa0284110:CDS | 30.0% | |
| ATATACAAACGCAAAGAACT+AGG | - | chr2_3:21949893-21949912 | Msa0284110:CDS | 30.0% | |
| ! | ATCTAAAGCTCTATGTATTC+TGG | + | chr2_3:21949963-21949982 | None:intergenic | 30.0% |
| CAGATGATGTAGAATTAGTA+AGG | - | chr2_3:21949984-21950003 | Msa0284110:CDS | 30.0% | |
| GAACATGTAAGAAAATACCT+CGG | + | chr2_3:21950453-21950472 | None:intergenic | 30.0% | |
| !! | ACGATTCATTGTTTTTCAGT+TGG | - | chr2_3:21950577-21950596 | Msa0284110:intron | 30.0% |
| ATGGATATCAATCCAATTGA+TGG | - | chr2_3:21950640-21950659 | Msa0284110:intron | 30.0% | |
| ATCTGAATTTACTCCGAATT+TGG | - | chr2_3:21950666-21950685 | Msa0284110:intron | 30.0% | |
| TCTGAATTTACTCCGAATTT+GGG | - | chr2_3:21950667-21950686 | Msa0284110:intron | 30.0% | |
| ! | GGCACCATTTAAAATAAAAG+AGG | - | chr2_3:21950723-21950742 | Msa0284110:intron | 30.0% |
| !! | TAAAAGAGGAGCATCTAATT+CGG | - | chr2_3:21950737-21950756 | Msa0284110:intron | 30.0% |
| TTACTTGTATCTATCTGGTT+CGG | - | chr2_3:21950909-21950928 | Msa0284110:CDS | 30.0% | |
| GGTTCGAAAAGAATTGATAT+AGG | - | chr2_3:21950930-21950949 | Msa0284110:CDS | 30.0% | |
| GCTACAAGAAGTTCTTAATA+AGG | - | chr2_3:21951194-21951213 | Msa0284110:CDS | 30.0% | |
| AAAGAGGAGTTTGATAAATC+TGG | - | chr2_3:21951231-21951250 | Msa0284110:CDS | 30.0% | |
| ATCATACTATTATTAGCCCT+TGG | + | chr2_3:21951294-21951313 | None:intergenic | 30.0% | |
| AAGCTATATTGTCTGATAGA+CGG | + | chr2_3:21949031-21949050 | None:intergenic | 30.0% | |
| TGACTAAGGATTATGATGTT+GGG | - | chr2_3:21949213-21949232 | Msa0284110:intron | 30.0% | |
| TAAAGATGTTTGTGTTTGTG+TGG | - | chr2_3:21949304-21949323 | Msa0284110:intron | 30.0% | |
| GATGATGATTGTTTACACTT+TGG | - | chr2_3:21949326-21949345 | Msa0284110:intron | 30.0% | |
| ATTGTTTACACTTTGGTTGT+TGG | - | chr2_3:21949333-21949352 | Msa0284110:intron | 30.0% | |
| TTGAAGCATGAAATCAACAA+CGG | + | chr2_3:21949360-21949379 | None:intergenic | 30.0% | |
| CACCTTTCAAATTTCAGAAT+TGG | - | chr2_3:21949397-21949416 | Msa0284110:intron | 30.0% | |
| !! | TAGTTGATTTGATTACTTGC+AGG | - | chr2_3:21949685-21949704 | Msa0284110:intron | 30.0% |
| CATGTGATAAACTACTAACA+AGG | - | chr2_3:21949789-21949808 | Msa0284110:CDS | 30.0% | |
| ATATACAAACGCAAAGAACT+AGG | - | chr2_3:21949893-21949912 | Msa0284110:CDS | 30.0% | |
| ! | ATCTAAAGCTCTATGTATTC+TGG | + | chr2_3:21949963-21949982 | None:intergenic | 30.0% |
| CAGATGATGTAGAATTAGTA+AGG | - | chr2_3:21949984-21950003 | Msa0284110:CDS | 30.0% | |
| GAACATGTAAGAAAATACCT+CGG | + | chr2_3:21950453-21950472 | None:intergenic | 30.0% | |
| !! | ACGATTCATTGTTTTTCAGT+TGG | - | chr2_3:21950577-21950596 | Msa0284110:intron | 30.0% |
| ATGGATATCAATCCAATTGA+TGG | - | chr2_3:21950640-21950659 | Msa0284110:intron | 30.0% | |
| ATCTGAATTTACTCCGAATT+TGG | - | chr2_3:21950666-21950685 | Msa0284110:intron | 30.0% | |
| TCTGAATTTACTCCGAATTT+GGG | - | chr2_3:21950667-21950686 | Msa0284110:intron | 30.0% | |
| ! | GGCACCATTTAAAATAAAAG+AGG | - | chr2_3:21950723-21950742 | Msa0284110:intron | 30.0% |
| !! | TAAAAGAGGAGCATCTAATT+CGG | - | chr2_3:21950737-21950756 | Msa0284110:intron | 30.0% |
| TTACTTGTATCTATCTGGTT+CGG | - | chr2_3:21950909-21950928 | Msa0284110:CDS | 30.0% | |
| GGTTCGAAAAGAATTGATAT+AGG | - | chr2_3:21950930-21950949 | Msa0284110:CDS | 30.0% | |
| GCTACAAGAAGTTCTTAATA+AGG | - | chr2_3:21951194-21951213 | Msa0284110:CDS | 30.0% | |
| AAAGAGGAGTTTGATAAATC+TGG | - | chr2_3:21951231-21951250 | Msa0284110:CDS | 30.0% | |
| ATCATACTATTATTAGCCCT+TGG | + | chr2_3:21951294-21951313 | None:intergenic | 30.0% | |
| GAAGTAGTGATAGCTGAATT+TGG | + | chr2_3:21948975-21948994 | None:intergenic | 35.0% | |
| ATATTGTCTGATAGACGGAT+CGG | + | chr2_3:21949026-21949045 | None:intergenic | 35.0% | |
| GTGACTAAGGATTATGATGT+TGG | - | chr2_3:21949212-21949231 | Msa0284110:intron | 35.0% | |
| GTTCTGCGTTATTTGTATAG+CGG | - | chr2_3:21949254-21949273 | Msa0284110:intron | 35.0% | |
| TGAAGCATGAAATCAACAAC+GGG | + | chr2_3:21949359-21949378 | None:intergenic | 35.0% | |
| AGAATTGGTTGCTCTTTATC+AGG | - | chr2_3:21949412-21949431 | Msa0284110:intron | 35.0% | |
| !! | CCATTTTGCTTTATTGTACG+CGG | - | chr2_3:21949552-21949571 | Msa0284110:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr2_3:21949578-21949597 | Msa0284110:CDS | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr2_3:21949583-21949602 | None:intergenic | 35.0% | |
| AATGGCAATAGATGACATGT+TGG | - | chr2_3:21949733-21949752 | Msa0284110:intron | 35.0% | |
| CTTTCTATAGCAAACGTTTG+TGG | - | chr2_3:21949761-21949780 | Msa0284110:CDS | 35.0% | |
| !!! | AGTCAGTGATTTTTCAAGAG+TGG | + | chr2_3:21949852-21949871 | None:intergenic | 35.0% |
| !!! | GTAAGGTTGCTTTTGAAAGA+AGG | - | chr2_3:21950001-21950020 | Msa0284110:CDS | 35.0% |
| AAAATCAAGAAGCTCAGTAG+TGG | + | chr2_3:21950089-21950108 | None:intergenic | 35.0% | |
| ! | ACTACTGAGCTTCTTGATTT+TGG | - | chr2_3:21950088-21950107 | Msa0284110:CDS | 35.0% |
| TAAATCTACTGAGGAAGGAA+AGG | - | chr2_3:21950294-21950313 | Msa0284110:CDS | 35.0% | |
| TCGATTGTGTATCGAGATAT+TGG | - | chr2_3:21950330-21950349 | Msa0284110:CDS | 35.0% | |
| ! | AGAAAATACCTCGGTTTTCT+AGG | + | chr2_3:21950444-21950463 | None:intergenic | 35.0% |
| !! | AGCAAAACTTTTGTTTCCGA+TGG | - | chr2_3:21950603-21950622 | Msa0284110:intron | 35.0% |
| AATTCAGATGTGCCATCAAT+TGG | + | chr2_3:21950655-21950674 | None:intergenic | 35.0% | |
| AGAACTTTCTTAAAGGTCGA+AGG | - | chr2_3:21950819-21950838 | Msa0284110:CDS | 35.0% | |
| !!! | TTTTTTGTCATCTTGAGCAG+TGG | - | chr2_3:21951035-21951054 | Msa0284110:CDS | 35.0% |
| TCTTAATAAGGTCTTCCATG+AGG | - | chr2_3:21951206-21951225 | Msa0284110:CDS | 35.0% | |
| GAAGTAGTGATAGCTGAATT+TGG | + | chr2_3:21948975-21948994 | None:intergenic | 35.0% | |
| ATATTGTCTGATAGACGGAT+CGG | + | chr2_3:21949026-21949045 | None:intergenic | 35.0% | |
| GTGACTAAGGATTATGATGT+TGG | - | chr2_3:21949212-21949231 | Msa0284110:intron | 35.0% | |
| GTTCTGCGTTATTTGTATAG+CGG | - | chr2_3:21949254-21949273 | Msa0284110:intron | 35.0% | |
| TGAAGCATGAAATCAACAAC+GGG | + | chr2_3:21949359-21949378 | None:intergenic | 35.0% | |
| AGAATTGGTTGCTCTTTATC+AGG | - | chr2_3:21949412-21949431 | Msa0284110:intron | 35.0% | |
| !! | CCATTTTGCTTTATTGTACG+CGG | - | chr2_3:21949552-21949571 | Msa0284110:CDS | 35.0% |
| !!! | TACCCTGTTTTTTACACAAG+AGG | - | chr2_3:21949578-21949597 | Msa0284110:CDS | 35.0% |
| AGCCTCTTGTGTAAAAAACA+GGG | + | chr2_3:21949583-21949602 | None:intergenic | 35.0% | |
| AATGGCAATAGATGACATGT+TGG | - | chr2_3:21949733-21949752 | Msa0284110:intron | 35.0% | |
| CTTTCTATAGCAAACGTTTG+TGG | - | chr2_3:21949761-21949780 | Msa0284110:CDS | 35.0% | |
| !!! | AGTCAGTGATTTTTCAAGAG+TGG | + | chr2_3:21949852-21949871 | None:intergenic | 35.0% |
| !!! | GTAAGGTTGCTTTTGAAAGA+AGG | - | chr2_3:21950001-21950020 | Msa0284110:CDS | 35.0% |
| AAAATCAAGAAGCTCAGTAG+TGG | + | chr2_3:21950089-21950108 | None:intergenic | 35.0% | |
| ! | ACTACTGAGCTTCTTGATTT+TGG | - | chr2_3:21950088-21950107 | Msa0284110:CDS | 35.0% |
| TAAATCTACTGAGGAAGGAA+AGG | - | chr2_3:21950294-21950313 | Msa0284110:CDS | 35.0% | |
| TCGATTGTGTATCGAGATAT+TGG | - | chr2_3:21950330-21950349 | Msa0284110:CDS | 35.0% | |
| ! | AGAAAATACCTCGGTTTTCT+AGG | + | chr2_3:21950444-21950463 | None:intergenic | 35.0% |
| !! | AGCAAAACTTTTGTTTCCGA+TGG | - | chr2_3:21950603-21950622 | Msa0284110:intron | 35.0% |
| AATTCAGATGTGCCATCAAT+TGG | + | chr2_3:21950655-21950674 | None:intergenic | 35.0% | |
| AGAACTTTCTTAAAGGTCGA+AGG | - | chr2_3:21950819-21950838 | Msa0284110:CDS | 35.0% | |
| !!! | TTTTTTGTCATCTTGAGCAG+TGG | - | chr2_3:21951035-21951054 | Msa0284110:CDS | 35.0% |
| TCTTAATAAGGTCTTCCATG+AGG | - | chr2_3:21951206-21951225 | Msa0284110:CDS | 35.0% | |
| AACGAAATCAGCAACAACAC+TGG | - | chr2_3:21948918-21948937 | Msa0284110:CDS | 40.0% | |
| TCTGGCAATGATCTTTGCAT+CGG | + | chr2_3:21949087-21949106 | None:intergenic | 40.0% | |
| TGCGAGGAGTAGTTTCTTTA+AGG | - | chr2_3:21949145-21949164 | Msa0284110:intron | 40.0% | |
| CCGCGTACAATAAAGCAAAA+TGG | + | chr2_3:21949555-21949574 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr2_3:21949584-21949603 | None:intergenic | 40.0% | |
| AAGGTCATAGGTTCAAGTCT+CGG | + | chr2_3:21949610-21949629 | None:intergenic | 40.0% | |
| TTGTTGTACCTAGAAAACCG+AGG | - | chr2_3:21950433-21950452 | Msa0284110:CDS | 40.0% | |
| TTCGGGAGTAACATATGTCA+GGG | + | chr2_3:21950532-21950551 | None:intergenic | 40.0% | |
| ATTCGGGAGTAACATATGTC+AGG | + | chr2_3:21950533-21950552 | None:intergenic | 40.0% | |
| TTTGTTTCCGATGGAAGCAA+AGG | - | chr2_3:21950612-21950631 | Msa0284110:intron | 40.0% | |
| ATCACAACCTTTGCTTCCAT+CGG | + | chr2_3:21950622-21950641 | None:intergenic | 40.0% | |
| GAATTTACTCCGAATTTGGG+TGG | - | chr2_3:21950670-21950689 | Msa0284110:intron | 40.0% | |
| GACAACTATGGACTTGAATG+AGG | - | chr2_3:21950702-21950721 | Msa0284110:intron | 40.0% | |
| !! | GGAAGTGTTGAACAAGATCA+TGG | - | chr2_3:21951089-21951108 | Msa0284110:CDS | 40.0% |
| AACGAAATCAGCAACAACAC+TGG | - | chr2_3:21948918-21948937 | Msa0284110:CDS | 40.0% | |
| TCTGGCAATGATCTTTGCAT+CGG | + | chr2_3:21949087-21949106 | None:intergenic | 40.0% | |
| TGCGAGGAGTAGTTTCTTTA+AGG | - | chr2_3:21949145-21949164 | Msa0284110:intron | 40.0% | |
| CCGCGTACAATAAAGCAAAA+TGG | + | chr2_3:21949555-21949574 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAAAC+AGG | + | chr2_3:21949584-21949603 | None:intergenic | 40.0% | |
| AAGGTCATAGGTTCAAGTCT+CGG | + | chr2_3:21949610-21949629 | None:intergenic | 40.0% | |
| TTGTTGTACCTAGAAAACCG+AGG | - | chr2_3:21950433-21950452 | Msa0284110:CDS | 40.0% | |
| TTCGGGAGTAACATATGTCA+GGG | + | chr2_3:21950532-21950551 | None:intergenic | 40.0% | |
| ATTCGGGAGTAACATATGTC+AGG | + | chr2_3:21950533-21950552 | None:intergenic | 40.0% | |
| TTTGTTTCCGATGGAAGCAA+AGG | - | chr2_3:21950612-21950631 | Msa0284110:intron | 40.0% | |
| ATCACAACCTTTGCTTCCAT+CGG | + | chr2_3:21950622-21950641 | None:intergenic | 40.0% | |
| GAATTTACTCCGAATTTGGG+TGG | - | chr2_3:21950670-21950689 | Msa0284110:intron | 40.0% | |
| GACAACTATGGACTTGAATG+AGG | - | chr2_3:21950702-21950721 | Msa0284110:intron | 40.0% | |
| !! | GGAAGTGTTGAACAAGATCA+TGG | - | chr2_3:21951089-21951108 | Msa0284110:CDS | 40.0% |
| GCAAAGATCATTGCCAGAGA+TGG | - | chr2_3:21949089-21949108 | Msa0284110:CDS | 45.0% | |
| AGAAACTTCTCGACCATCTC+TGG | + | chr2_3:21949105-21949124 | None:intergenic | 45.0% | |
| AGAAACGATGCTGCAACTGA+AGG | - | chr2_3:21949187-21949206 | Msa0284110:intron | 45.0% | |
| GCAACTGAAGGAAGTGACTA+AGG | - | chr2_3:21949199-21949218 | Msa0284110:intron | 45.0% | |
| GGCAATAGATGACATGTTGG+TGG | - | chr2_3:21949736-21949755 | Msa0284110:intron | 45.0% | |
| AGGACACACTACTCTAGATG+AGG | - | chr2_3:21950021-21950040 | Msa0284110:CDS | 45.0% | |
| CCATCGAAAGTGAGTTCAGA+AGG | + | chr2_3:21950223-21950242 | None:intergenic | 45.0% | |
| CCTTCTGAACTCACTTTCGA+TGG | - | chr2_3:21950220-21950239 | Msa0284110:CDS | 45.0% | |
| AAAGCGTAGTACGAAAGCTG+TGG | - | chr2_3:21950264-21950283 | Msa0284110:CDS | 45.0% | |
| TATTGGAGCAAGCTGAGAGA+AGG | - | chr2_3:21950347-21950366 | Msa0284110:CDS | 45.0% | |
| ATTGGAGCAAGCTGAGAGAA+GGG | - | chr2_3:21950348-21950367 | Msa0284110:CDS | 45.0% | |
| AGAGATGCCTCACCATGTAA+AGG | + | chr2_3:21950376-21950395 | None:intergenic | 45.0% | |
| GGCATCTCTTTCTCTTGCTA+AGG | - | chr2_3:21950387-21950406 | Msa0284110:CDS | 45.0% | |
| TCTCTTTCTCTTGCTAAGGC+AGG | - | chr2_3:21950391-21950410 | Msa0284110:CDS | 45.0% | |
| CTCTTTCTCTTGCTAAGGCA+GGG | - | chr2_3:21950392-21950411 | Msa0284110:CDS | 45.0% | |
| TCTTTCTCTTGCTAAGGCAG+GGG | - | chr2_3:21950393-21950412 | Msa0284110:CDS | 45.0% | |
| GATGGAAGCAAAGGTTGTGA+TGG | - | chr2_3:21950621-21950640 | Msa0284110:intron | 45.0% | |
| TCAAGTCCATAGTTGTCCTC+TGG | + | chr2_3:21950699-21950718 | None:intergenic | 45.0% | |
| ! | GGAGCATCTAATTCGGATGA+AGG | - | chr2_3:21950744-21950763 | Msa0284110:intron | 45.0% |
| TCATCTTGAGCAGTGGAGTT+GGG | - | chr2_3:21951042-21951061 | Msa0284110:CDS | 45.0% | |
| CAAACTCCTCTTTGTCCTCA+TGG | + | chr2_3:21951224-21951243 | None:intergenic | 45.0% | |
| TCATCCTCATCCACGTCAAT+AGG | - | chr2_3:21951264-21951283 | Msa0284110:CDS | 45.0% | |
| CATTCCTATTGACGTGGATG+AGG | + | chr2_3:21951271-21951290 | None:intergenic | 45.0% | |
| CACGTCAATAGGAATGCCAA+GGG | - | chr2_3:21951275-21951294 | Msa0284110:CDS | 45.0% | |
| GCAAAGATCATTGCCAGAGA+TGG | - | chr2_3:21949089-21949108 | Msa0284110:CDS | 45.0% | |
| AGAAACTTCTCGACCATCTC+TGG | + | chr2_3:21949105-21949124 | None:intergenic | 45.0% | |
| AGAAACGATGCTGCAACTGA+AGG | - | chr2_3:21949187-21949206 | Msa0284110:intron | 45.0% | |
| GCAACTGAAGGAAGTGACTA+AGG | - | chr2_3:21949199-21949218 | Msa0284110:intron | 45.0% | |
| GGCAATAGATGACATGTTGG+TGG | - | chr2_3:21949736-21949755 | Msa0284110:intron | 45.0% | |
| AGGACACACTACTCTAGATG+AGG | - | chr2_3:21950021-21950040 | Msa0284110:CDS | 45.0% | |
| CCATCGAAAGTGAGTTCAGA+AGG | + | chr2_3:21950223-21950242 | None:intergenic | 45.0% | |
| CCTTCTGAACTCACTTTCGA+TGG | - | chr2_3:21950220-21950239 | Msa0284110:CDS | 45.0% | |
| AAAGCGTAGTACGAAAGCTG+TGG | - | chr2_3:21950264-21950283 | Msa0284110:CDS | 45.0% | |
| TATTGGAGCAAGCTGAGAGA+AGG | - | chr2_3:21950347-21950366 | Msa0284110:CDS | 45.0% | |
| ATTGGAGCAAGCTGAGAGAA+GGG | - | chr2_3:21950348-21950367 | Msa0284110:CDS | 45.0% | |
| AGAGATGCCTCACCATGTAA+AGG | + | chr2_3:21950376-21950395 | None:intergenic | 45.0% | |
| GGCATCTCTTTCTCTTGCTA+AGG | - | chr2_3:21950387-21950406 | Msa0284110:CDS | 45.0% | |
| TCTCTTTCTCTTGCTAAGGC+AGG | - | chr2_3:21950391-21950410 | Msa0284110:CDS | 45.0% | |
| CTCTTTCTCTTGCTAAGGCA+GGG | - | chr2_3:21950392-21950411 | Msa0284110:CDS | 45.0% | |
| TCTTTCTCTTGCTAAGGCAG+GGG | - | chr2_3:21950393-21950412 | Msa0284110:CDS | 45.0% | |
| GATGGAAGCAAAGGTTGTGA+TGG | - | chr2_3:21950621-21950640 | Msa0284110:intron | 45.0% | |
| TCAAGTCCATAGTTGTCCTC+TGG | + | chr2_3:21950699-21950718 | None:intergenic | 45.0% | |
| ! | GGAGCATCTAATTCGGATGA+AGG | - | chr2_3:21950744-21950763 | Msa0284110:intron | 45.0% |
| TCATCTTGAGCAGTGGAGTT+GGG | - | chr2_3:21951042-21951061 | Msa0284110:CDS | 45.0% | |
| CAAACTCCTCTTTGTCCTCA+TGG | + | chr2_3:21951224-21951243 | None:intergenic | 45.0% | |
| TCATCCTCATCCACGTCAAT+AGG | - | chr2_3:21951264-21951283 | Msa0284110:CDS | 45.0% | |
| CATTCCTATTGACGTGGATG+AGG | + | chr2_3:21951271-21951290 | None:intergenic | 45.0% | |
| CACGTCAATAGGAATGCCAA+GGG | - | chr2_3:21951275-21951294 | Msa0284110:CDS | 45.0% | |
| TTGTCTGATAGACGGATCGG+TGG | + | chr2_3:21949023-21949042 | None:intergenic | 50.0% | |
| GTCGAGAAGTTTCTGTGCAC+CGG | - | chr2_3:21949111-21949130 | Msa0284110:CDS | 50.0% | |
| TCCTCGCAGACAAAATGCAC+CGG | + | chr2_3:21949133-21949152 | None:intergenic | 50.0% | |
| !!! | CTGCCTAGTTTTAGTGCACG+GGG | + | chr2_3:21949513-21949532 | None:intergenic | 50.0% |
| !!! | CCTGCCTAGTTTTAGTGCAC+GGG | + | chr2_3:21949514-21949533 | None:intergenic | 50.0% |
| !!! | CCCTGCCTAGTTTTAGTGCA+CGG | + | chr2_3:21949515-21949534 | None:intergenic | 50.0% |
| CCGTGCACTAAAACTAGGCA+GGG | - | chr2_3:21949512-21949531 | Msa0284110:CDS | 50.0% | |
| AAAATGGTGAGACCCCTTGC+AGG | + | chr2_3:21949539-21949558 | None:intergenic | 50.0% | |
| GAGAGAAGGGAGCCTTTACA+TGG | - | chr2_3:21950361-21950380 | Msa0284110:CDS | 50.0% | |
| AAGGGAGCCTTTACATGGTG+AGG | - | chr2_3:21950366-21950385 | Msa0284110:CDS | 50.0% | |
| CTCTGGCAACCACCCAAATT+CGG | + | chr2_3:21950682-21950701 | None:intergenic | 50.0% | |
| TGGTTGCCAGAGGACAACTA+TGG | - | chr2_3:21950690-21950709 | Msa0284110:intron | 50.0% | |
| !! | ATGAAGGCGTTGTCTAGAGC+AGG | - | chr2_3:21950760-21950779 | Msa0284110:intron | 50.0% |
| GTCATCTTGAGCAGTGGAGT+TGG | - | chr2_3:21951041-21951060 | Msa0284110:CDS | 50.0% | |
| CATCTTGAGCAGTGGAGTTG+GGG | - | chr2_3:21951043-21951062 | Msa0284110:CDS | 50.0% | |
| TCAACACTTCCGAGCAACGA+GGG | + | chr2_3:21951080-21951099 | None:intergenic | 50.0% | |
| TTCAACACTTCCGAGCAACG+AGG | + | chr2_3:21951081-21951100 | None:intergenic | 50.0% | |
| CGCTTCACTTGTCGATCTTC+GGG | + | chr2_3:21951159-21951178 | None:intergenic | 50.0% | |
| GCGCTTCACTTGTCGATCTT+CGG | + | chr2_3:21951160-21951179 | None:intergenic | 50.0% | |
| GGTCTTCCATGAGGACAAAG+AGG | - | chr2_3:21951215-21951234 | Msa0284110:CDS | 50.0% | |
| CCTTGGCATTCCTATTGACG+TGG | + | chr2_3:21951277-21951296 | None:intergenic | 50.0% | |
| CCACGTCAATAGGAATGCCA+AGG | - | chr2_3:21951274-21951293 | Msa0284110:CDS | 50.0% | |
| TTGTCTGATAGACGGATCGG+TGG | + | chr2_3:21949023-21949042 | None:intergenic | 50.0% | |
| GTCGAGAAGTTTCTGTGCAC+CGG | - | chr2_3:21949111-21949130 | Msa0284110:CDS | 50.0% | |
| TCCTCGCAGACAAAATGCAC+CGG | + | chr2_3:21949133-21949152 | None:intergenic | 50.0% | |
| !!! | CTGCCTAGTTTTAGTGCACG+GGG | + | chr2_3:21949513-21949532 | None:intergenic | 50.0% |
| !!! | CCTGCCTAGTTTTAGTGCAC+GGG | + | chr2_3:21949514-21949533 | None:intergenic | 50.0% |
| !!! | CCCTGCCTAGTTTTAGTGCA+CGG | + | chr2_3:21949515-21949534 | None:intergenic | 50.0% |
| CCGTGCACTAAAACTAGGCA+GGG | - | chr2_3:21949512-21949531 | Msa0284110:CDS | 50.0% | |
| AAAATGGTGAGACCCCTTGC+AGG | + | chr2_3:21949539-21949558 | None:intergenic | 50.0% | |
| GAGAGAAGGGAGCCTTTACA+TGG | - | chr2_3:21950361-21950380 | Msa0284110:CDS | 50.0% | |
| AAGGGAGCCTTTACATGGTG+AGG | - | chr2_3:21950366-21950385 | Msa0284110:CDS | 50.0% | |
| CTCTGGCAACCACCCAAATT+CGG | + | chr2_3:21950682-21950701 | None:intergenic | 50.0% | |
| TGGTTGCCAGAGGACAACTA+TGG | - | chr2_3:21950690-21950709 | Msa0284110:intron | 50.0% | |
| !! | ATGAAGGCGTTGTCTAGAGC+AGG | - | chr2_3:21950760-21950779 | Msa0284110:intron | 50.0% |
| GTCATCTTGAGCAGTGGAGT+TGG | - | chr2_3:21951041-21951060 | Msa0284110:CDS | 50.0% | |
| CATCTTGAGCAGTGGAGTTG+GGG | - | chr2_3:21951043-21951062 | Msa0284110:CDS | 50.0% | |
| TCAACACTTCCGAGCAACGA+GGG | + | chr2_3:21951080-21951099 | None:intergenic | 50.0% | |
| TTCAACACTTCCGAGCAACG+AGG | + | chr2_3:21951081-21951100 | None:intergenic | 50.0% | |
| CGCTTCACTTGTCGATCTTC+GGG | + | chr2_3:21951159-21951178 | None:intergenic | 50.0% | |
| GCGCTTCACTTGTCGATCTT+CGG | + | chr2_3:21951160-21951179 | None:intergenic | 50.0% | |
| GGTCTTCCATGAGGACAAAG+AGG | - | chr2_3:21951215-21951234 | Msa0284110:CDS | 50.0% | |
| CCTTGGCATTCCTATTGACG+TGG | + | chr2_3:21951277-21951296 | None:intergenic | 50.0% | |
| CCACGTCAATAGGAATGCCA+AGG | - | chr2_3:21951274-21951293 | Msa0284110:CDS | 50.0% | |
| ! | ACCGGTGCATTTTGTCTGCG+AGG | - | chr2_3:21949129-21949148 | Msa0284110:CDS | 55.0% |
| CAGCCCCGTGCACTAAAACT+AGG | - | chr2_3:21949507-21949526 | Msa0284110:CDS | 55.0% | |
| CCCGTGCACTAAAACTAGGC+AGG | - | chr2_3:21949511-21949530 | Msa0284110:CDS | 55.0% | |
| AAACTAGGCAGGGTCCTGCA+AGG | - | chr2_3:21949522-21949541 | Msa0284110:CDS | 55.0% | |
| AACTAGGCAGGGTCCTGCAA+GGG | - | chr2_3:21949523-21949542 | Msa0284110:CDS | 55.0% | |
| CGAATTTGGGTGGTTGCCAG+AGG | - | chr2_3:21950680-21950699 | Msa0284110:intron | 55.0% | |
| GAGCAGTGGAGTTGGGGAAA+CGG | - | chr2_3:21951049-21951068 | Msa0284110:CDS | 55.0% | |
| ACGGTTCTTCCCTCGTTGCT+CGG | - | chr2_3:21951068-21951087 | Msa0284110:CDS | 55.0% | |
| TGCGAGCTGCGATAGGTCAT+CGG | + | chr2_3:21951118-21951137 | None:intergenic | 55.0% | |
| CTATCGCAGCTCGCATGCAT+GGG | - | chr2_3:21951123-21951142 | Msa0284110:CDS | 55.0% | |
| AGTGAAGCGCAGACGATACG+CGG | - | chr2_3:21951170-21951189 | Msa0284110:CDS | 55.0% | |
| ! | ACCGGTGCATTTTGTCTGCG+AGG | - | chr2_3:21949129-21949148 | Msa0284110:CDS | 55.0% |
| CAGCCCCGTGCACTAAAACT+AGG | - | chr2_3:21949507-21949526 | Msa0284110:CDS | 55.0% | |
| CCCGTGCACTAAAACTAGGC+AGG | - | chr2_3:21949511-21949530 | Msa0284110:CDS | 55.0% | |
| AAACTAGGCAGGGTCCTGCA+AGG | - | chr2_3:21949522-21949541 | Msa0284110:CDS | 55.0% | |
| AACTAGGCAGGGTCCTGCAA+GGG | - | chr2_3:21949523-21949542 | Msa0284110:CDS | 55.0% | |
| CGAATTTGGGTGGTTGCCAG+AGG | - | chr2_3:21950680-21950699 | Msa0284110:intron | 55.0% | |
| GAGCAGTGGAGTTGGGGAAA+CGG | - | chr2_3:21951049-21951068 | Msa0284110:CDS | 55.0% | |
| ACGGTTCTTCCCTCGTTGCT+CGG | - | chr2_3:21951068-21951087 | Msa0284110:CDS | 55.0% | |
| TGCGAGCTGCGATAGGTCAT+CGG | + | chr2_3:21951118-21951137 | None:intergenic | 55.0% | |
| CTATCGCAGCTCGCATGCAT+GGG | - | chr2_3:21951123-21951142 | Msa0284110:CDS | 55.0% | |
| AGTGAAGCGCAGACGATACG+CGG | - | chr2_3:21951170-21951189 | Msa0284110:CDS | 55.0% | |
| ACTAGGCAGGGTCCTGCAAG+GGG | - | chr2_3:21949524-21949543 | Msa0284110:CDS | 60.0% | |
| CCATGCATGCGAGCTGCGAT+AGG | + | chr2_3:21951125-21951144 | None:intergenic | 60.0% | |
| CCTATCGCAGCTCGCATGCA+TGG | - | chr2_3:21951122-21951141 | Msa0284110:CDS | 60.0% | |
| ACTAGGCAGGGTCCTGCAAG+GGG | - | chr2_3:21949524-21949543 | Msa0284110:CDS | 60.0% | |
| CCATGCATGCGAGCTGCGAT+AGG | + | chr2_3:21951125-21951144 | None:intergenic | 60.0% | |
| CCTATCGCAGCTCGCATGCA+TGG | - | chr2_3:21951122-21951141 | Msa0284110:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 21948882 | 21951329 | 21948882 | ID=Msa0284110;Name=Msa0284110 |
| chr2_3 | mRNA | 21948882 | 21951329 | 21948882 | ID=Msa0284110-mRNA-1;Parent=Msa0284110;Name=Msa0284110-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|4|0|586 |
| chr2_3 | exon | 21950778 | 21951329 | 21950778 | ID=Msa0284110-mRNA-1:exon:8590;Parent=Msa0284110-mRNA-1 |
| chr2_3 | exon | 21949757 | 21950504 | 21949757 | ID=Msa0284110-mRNA-1:exon:8589;Parent=Msa0284110-mRNA-1 |
| chr2_3 | exon | 21949430 | 21949615 | 21949430 | ID=Msa0284110-mRNA-1:exon:8588;Parent=Msa0284110-mRNA-1 |
| chr2_3 | exon | 21948882 | 21949156 | 21948882 | ID=Msa0284110-mRNA-1:exon:8587;Parent=Msa0284110-mRNA-1 |
| chr2_3 | CDS | 21950778 | 21951329 | 21950778 | ID=Msa0284110-mRNA-1:cds;Parent=Msa0284110-mRNA-1 |
| chr2_3 | CDS | 21949757 | 21950504 | 21949757 | ID=Msa0284110-mRNA-1:cds;Parent=Msa0284110-mRNA-1 |
| chr2_3 | CDS | 21949430 | 21949615 | 21949430 | ID=Msa0284110-mRNA-1:cds;Parent=Msa0284110-mRNA-1 |
| chr2_3 | CDS | 21948882 | 21949156 | 21948882 | ID=Msa0284110-mRNA-1:cds;Parent=Msa0284110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
