AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0286240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0286240 MtrunA17_Chr2g0303101 94.716 1003 35 1 1 985 1 1003 0.0 1957
Msa0286240 MtrunA17_Chr8g0380981 58.902 1056 344 14 14 983 2 1053 0.0 1161
Msa0286240 MtrunA17_Chr1g0189211 58.247 582 232 6 27 604 125 699 0.0 687
Msa0286240 MtrunA17_Chr1g0189211 37.603 242 139 3 744 984 998 1228 1.02e-39 160
Msa0286240 MtrunA17_Chr7g0261401 45.391 575 290 8 34 590 99 667 1.13e-159 491
Msa0286240 MtrunA17_Chr5g0397501 40.515 427 206 8 154 568 288 678 1.14e-86 304
Msa0286240 MtrunA17_Chr5g0397501 54.054 74 30 2 47 120 23 92 4.39e-14 77.0
Msa0286240 MtrunA17_Chr5g0410721 35.714 406 176 11 49 440 86 420 3.56e-59 218
Msa0286240 MtrunA17_Chr3g0116441 33.827 405 195 10 52 445 18 360 4.08e-55 209
Msa0286240 MtrunA17_Chr1g0164731 29.353 603 321 17 48 631 41 557 1.88e-54 200
Msa0286240 MtrunA17_Chr1g0164761 31.450 407 186 11 48 445 4 326 5.07e-47 177
Msa0286240 MtrunA17_Chr1g0199511 39.574 235 138 3 264 495 295 528 1.16e-42 169
Msa0286240 MtrunA17_Chr7g0214951 40.870 115 43 4 294 400 104 201 8.38e-16 77.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0286240 AT1G30810.3 64.202 595 196 6 4 589 6 592 0.0 746
Msa0286240 AT1G30810.3 53.631 179 73 4 748 924 648 818 7.86e-51 193
Msa0286240 AT1G30810.2 64.202 595 196 6 4 589 6 592 0.0 746
Msa0286240 AT1G30810.2 53.631 179 73 4 748 924 648 818 7.86e-51 193
Msa0286240 AT1G30810.1 64.202 595 196 6 4 589 6 592 0.0 746
Msa0286240 AT1G30810.1 53.631 179 73 4 748 924 648 818 7.86e-51 193
Msa0286240 AT4G20400.1 60.274 584 219 4 8 585 12 588 0.0 718
Msa0286240 AT4G20400.1 40.708 226 113 3 761 982 743 951 2.70e-44 174
Msa0286240 AT2G34880.1 57.313 588 224 9 7 585 14 583 0.0 691
Msa0286240 AT2G34880.1 49.438 178 83 2 720 894 602 775 9.16e-46 177
Msa0286240 AT4G20400.2 61.466 532 192 4 60 585 7 531 0.0 665
Msa0286240 AT4G20400.2 40.807 223 111 3 764 982 689 894 2.48e-44 174
Msa0286240 AT1G08620.3 56.724 580 242 3 33 605 141 718 0.0 654
Msa0286240 AT1G08620.3 31.367 373 212 8 619 961 845 1203 4.43e-40 161
Msa0286240 AT1G08620.2 56.724 580 242 3 33 605 127 704 0.0 654
Msa0286240 AT1G08620.2 31.367 373 212 8 619 961 831 1189 4.85e-40 161
Msa0286240 AT1G08620.4 56.724 580 242 3 33 605 127 704 0.0 654
Msa0286240 AT1G08620.4 31.367 373 212 8 619 961 831 1189 4.85e-40 161
Msa0286240 AT1G08620.1 56.724 580 242 3 33 605 127 704 0.0 654
Msa0286240 AT1G08620.1 31.367 373 212 8 619 961 831 1189 4.85e-40 161
Msa0286240 AT2G38950.1 39.840 625 322 11 22 628 76 664 8.30e-138 430
Msa0286240 AT1G63490.1 40.330 424 208 7 160 573 38 426 1.29e-90 315
Msa0286240 AT1G63490.2 40.330 424 208 7 160 573 291 679 1.15e-89 314
Msa0286240 AT1G63490.2 52.174 69 29 2 52 120 31 95 8.43e-12 70.1
Msa0286240 AT1G63490.4 40.330 424 208 7 160 573 291 679 1.26e-89 314
Msa0286240 AT1G63490.4 52.174 69 29 2 52 120 31 95 8.57e-12 70.1
Msa0286240 AT5G46910.2 33.333 510 240 17 49 542 100 525 4.50e-62 223
Msa0286240 AT5G46910.1 33.855 511 236 19 49 542 100 525 1.92e-61 224
Msa0286240 AT3G48430.1 31.648 455 263 11 52 495 20 437 5.22e-46 181
Msa0286240 AT5G04240.1 38.723 235 140 3 264 495 263 496 6.56e-41 164
Msa0286240 AT1G63490.3 36.134 238 129 4 341 573 1 220 3.44e-37 152

Find 220 sgRNAs with CRISPR-Local

Find 362 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGATCAGTATGCACTTTC+TGG 0.098787 2_3:-27139322 Msa0286240:CDS
GCAATATGCTAGCCACTTTA+AGG 0.112299 2_3:-27139654 Msa0286240:CDS
AGTTCTTACCAAGGCATTTA+AGG 0.186892 2_3:-27138274 Msa0286240:intron
AATTTAACTGAAGAAATTTC+TGG 0.191312 2_3:-27135916 Msa0286240:three_prime_UTR
CCGAGGGCTCCCTTCGGTTT+TGG 0.197047 2_3:+27139573 None:intergenic
GACTTGGAAACTGGAGTATT+TGG 0.209261 2_3:-27139385 Msa0286240:CDS
TTCTTAAGGAGAAAGATATT+TGG 0.254609 2_3:-27139901 Msa0286240:CDS
GTGAAGCCTAGATGAAATTT+TGG 0.255816 2_3:-27135893 Msa0286240:three_prime_UTR
TTCTGTCAAGCCTATAAGTT+TGG 0.258215 2_3:-27137323 Msa0286240:CDS
CGCAATGAGCTTAGCTCTTC+GGG 0.259835 2_3:+27136111 None:intergenic
TGCAAAATGCATCTGTAATT+AGG 0.270016 2_3:+27135847 None:intergenic
ACAACAGATCCCAAACTTAT+AGG 0.275338 2_3:+27137313 None:intergenic
CCCTCATCTTTAAGAATTGA+TGG 0.280365 2_3:+27138606 None:intergenic
GTAATTGATGCTGGACTTCT+AGG 0.284250 2_3:-27137082 Msa0286240:CDS
GTTTGAAAATCTAACCTCTT+TGG 0.284374 2_3:+27141047 None:intergenic
CCCTTTACCGTCCATTGTTC+AGG 0.287730 2_3:-27136612 Msa0286240:intron
TTCACTTGCTCTTGAGTTAT+GGG 0.291488 2_3:-27137848 Msa0286240:CDS
ACCAGATCATTGAGTAGATT+TGG 0.300651 2_3:+27138768 None:intergenic
TGAAAGTCTTAGAAGTAAAA+AGG 0.310711 2_3:-27140440 Msa0286240:intron
TGTAAAGTTCAACGGCATTT+AGG 0.320348 2_3:+27138445 None:intergenic
TTGAATGAAACAAATGGAAT+TGG 0.322118 2_3:-27141073 Msa0286240:exon
GGTTCCACCTTGCCTTCTTA+AGG 0.324646 2_3:-27139915 Msa0286240:CDS
CACTTTAAGGAATGCTACTT+TGG 0.328409 2_3:-27139641 Msa0286240:CDS
ATTAGCTTCAGAAGCTGATT+TGG 0.335951 2_3:+27139745 None:intergenic
AAAGCAGAAGCATGGCTTCC+AGG 0.340144 2_3:+27138837 None:intergenic
TCTTAAGGAGAAAGATATTT+GGG 0.341769 2_3:-27139900 Msa0286240:CDS
ATTCAGAAAGCTTTGTAGAT+AGG 0.345386 2_3:-27136021 Msa0286240:exon
GATTGTCCCTCCAGCTTGTT+GGG 0.347186 2_3:-27139936 Msa0286240:CDS
CAGTTATCGATGACACTTCC+TGG 0.347721 2_3:+27136264 None:intergenic
TCTTCGGCACAAGCCTAAAA+AGG 0.349781 2_3:-27140482 Msa0286240:CDS
ACCATTCTGGGTTCAATTGT+GGG 0.351201 2_3:-27138521 Msa0286240:CDS
CTGAATACGGGTGGAAAATT+CGG 0.351486 2_3:+27139871 None:intergenic
TCTCCTACATGTTCCTGATT+TGG 0.353753 2_3:+27139772 None:intergenic
TTAAGACAAGAATATTTATC+AGG 0.357562 2_3:+27137973 None:intergenic
CTTGCAGAGCTAACTCTTCA+TGG 0.358880 2_3:-27138348 Msa0286240:CDS
GGATTGTCCCTCCAGCTTGT+TGG 0.359013 2_3:-27139937 Msa0286240:CDS
CACAATTCTTGTACATTTGA+TGG 0.361785 2_3:-27137484 Msa0286240:CDS
ATTCACTTGCTCTTGAGTTA+TGG 0.365297 2_3:-27137849 Msa0286240:CDS
GTGCTGAACAGTTCGATATA+CGG 0.370902 2_3:+27138578 None:intergenic
CTTATATTGTAGGTGTACTA+TGG 0.374880 2_3:-27139412 Msa0286240:intron
GAATTTGCCTTTCAAGGTTA+AGG 0.376693 2_3:-27135799 Msa0286240:three_prime_UTR
AGGAAATTGAAGGTGAATAT+TGG 0.376749 2_3:-27139547 Msa0286240:CDS
ACAGGTGCTTCATCAATTAT+AGG 0.379898 2_3:+27140148 None:intergenic
GAGCTTCTGAAAAGCATTAA+CGG 0.382203 2_3:-27136653 Msa0286240:CDS
GCGCAATGAGCTTAGCTCTT+CGG 0.382376 2_3:+27136110 None:intergenic
TCACTATCTAAACTTTCATT+TGG 0.383032 2_3:+27137646 None:intergenic
GTAAATCAATTTGCTGAATA+CGG 0.383823 2_3:+27139858 None:intergenic
TATGGAGCGGACTTGGAAAC+TGG 0.386530 2_3:-27139394 Msa0286240:CDS
TACCATTCTGGGTTCAATTG+TGG 0.387288 2_3:-27138522 Msa0286240:CDS
GGTACTTCCTCAAACAAATC+AGG 0.393440 2_3:+27138789 None:intergenic
ATTCCAAAACAAAGTACAAA+AGG 0.408341 2_3:+27135818 None:intergenic
TTTGTTCATGCAAACCTCAT+TGG 0.415225 2_3:+27137792 None:intergenic
AAACTGGTTGTGCGGGAACC+AGG 0.420135 2_3:-27137738 Msa0286240:CDS
TTTGTTCTGCTCATGCGAAA+TGG 0.421801 2_3:-27137941 Msa0286240:CDS
ATTTAACTGAAGAAATTTCT+GGG 0.423645 2_3:-27135915 Msa0286240:three_prime_UTR
AACTTTCATTTGGCGCACTA+AGG 0.424331 2_3:+27137656 None:intergenic
CCTGAACAATGGACGGTAAA+GGG 0.427142 2_3:+27136612 None:intergenic
ACATAGCTACAGATTCTTGT+TGG 0.428494 2_3:+27137112 None:intergenic
GGTGTACTATGGAGCGGACT+TGG 0.428752 2_3:-27139401 Msa0286240:CDS
ATCGAACTGTTCAGCACTCT+GGG 0.429842 2_3:-27138572 Msa0286240:CDS
TGTTGCAGATATCAGCTAGA+TGG 0.432281 2_3:-27140192 Msa0286240:intron
TATCGAACTGTTCAGCACTC+TGG 0.436435 2_3:-27138573 Msa0286240:CDS
TCTGTCAAGCCTATAAGTTT+GGG 0.440166 2_3:-27137322 Msa0286240:CDS
ACTTTAAGGAATGCTACTTT+GGG 0.447518 2_3:-27139640 Msa0286240:CDS
CGTAGAAGGAACTCCAAATC+AGG 0.448607 2_3:-27139785 Msa0286240:CDS
ATCCATACCTAAGGGTTATC+CGG 0.453266 2_3:-27139341 Msa0286240:CDS
TGCAATAAATGATAAAATGC+AGG 0.455377 2_3:-27135688 Msa0286240:three_prime_UTR
GATGAAATCAATACTACAAA+AGG 0.455907 2_3:-27136139 Msa0286240:CDS
AGTTTGGGATCTGTTGTTCA+TGG 0.456198 2_3:-27137307 Msa0286240:CDS
GCACTTGCCTGATTTGTTTG+AGG 0.456711 2_3:-27138796 Msa0286240:CDS
ACCAAATCTACTCAATGATC+TGG 0.458628 2_3:-27138769 Msa0286240:intron
AATCATTACCTTAAATGCCT+TGG 0.459780 2_3:+27138266 None:intergenic
ACTTTGGTGACTCAAAGATA+TGG 0.460598 2_3:-27138869 Msa0286240:CDS
CCTCCTCCGAGGGCTCCCTT+CGG 0.462526 2_3:+27139567 None:intergenic
GAGAAATACGGATTTCAAGC+AGG 0.463346 2_3:-27139704 Msa0286240:CDS
AAATATCTTTCTCCTTAAGA+AGG 0.467623 2_3:+27139903 None:intergenic
TAAGGCATCATCCATACCTA+AGG 0.467936 2_3:-27139350 Msa0286240:CDS
GAAGGAAGCGAAAACGTAGA+AGG 0.471595 2_3:-27139799 Msa0286240:CDS
GTCATCAGTGTGCAGAGTAT+TGG 0.471615 2_3:-27136311 Msa0286240:CDS
ACTTGAGGTGCATCTGCAAA+TGG 0.473346 2_3:-27137455 Msa0286240:CDS
TCGCTTAATTATCTACACTT+TGG 0.473473 2_3:-27138885 Msa0286240:CDS
GTTTCTGAAGTAATTGATGC+TGG 0.475315 2_3:-27137091 Msa0286240:CDS
CAAAGTAGCATTCCTTAAAG+TGG 0.482363 2_3:+27139642 None:intergenic
AAATTGCTTGAAGCACTAGA+AGG 0.484561 2_3:-27137874 Msa0286240:CDS
CAAGTACCAAAATTTCATCT+AGG 0.484948 2_3:+27135887 None:intergenic
CCTACATATGCCATAAGGTT+CGG 0.488486 2_3:+27139958 None:intergenic
TTGAAAGATGCAAATGAAGA+TGG 0.489132 2_3:-27139617 Msa0286240:CDS
ATACTCTGCACACTGATGAC+TGG 0.492600 2_3:+27136314 None:intergenic
GACTTATATCTATCTACTGT+CGG 0.493280 2_3:-27138009 Msa0286240:CDS
TTTGAAGGAAGTGACATCTC+AGG 0.493396 2_3:-27139253 Msa0286240:CDS
GACAAGGGTCATGAAGAAAC+TGG 0.493740 2_3:-27137754 Msa0286240:CDS
CAGAAGTTTCATCATGCTCT+AGG 0.495798 2_3:-27137513 Msa0286240:CDS
CCAAAACCGAAGGGAGCCCT+CGG 0.495936 2_3:-27139573 Msa0286240:CDS
ATGACACTTCCTGGAGATGT+AGG 0.496695 2_3:+27136273 None:intergenic
ATCTCAATTCTTTCCGACGT+TGG 0.499310 2_3:-27135987 Msa0286240:three_prime_UTR
AGAAGCTACTGTGGGAAAGA+TGG 0.500316 2_3:-27138297 Msa0286240:CDS
GCTAAAGCCTTAACCTTGAA+AGG 0.502839 2_3:+27135792 None:intergenic
GAAACTGGAGTATTTGGAAG+TGG 0.503820 2_3:-27139379 Msa0286240:CDS
TAAATCAATTTGCTGAATAC+GGG 0.504028 2_3:+27139859 None:intergenic
ACCTGAACAATGGACGGTAA+AGG 0.506844 2_3:+27136611 None:intergenic
CCTTCAATTTCCTCCTCCGA+GGG 0.507714 2_3:+27139557 None:intergenic
AAAGGTTTCCCTACATCTCC+AGG 0.510314 2_3:-27136282 Msa0286240:CDS
CCGAAGGGAGCCCTCGGAGG+AGG 0.511178 2_3:-27139567 Msa0286240:CDS
GTAGATAATTAAGCGAATAG+AGG 0.512964 2_3:+27138892 None:intergenic
TGCTGAACAGTTCGATATAC+GGG 0.513720 2_3:+27138579 None:intergenic
CTGTTGTTCATGGGAAGCTA+TGG 0.515810 2_3:-27137297 Msa0286240:CDS
TTCAGCGACTTAAAATGAGT+TGG 0.516196 2_3:+27138087 None:intergenic
CTTCGGACTGGTTTCTGCCA+TGG 0.519173 2_3:-27137815 Msa0286240:CDS
ATCAGTATGCACTTTCTGGT+TGG 0.522030 2_3:-27139318 Msa0286240:CDS
ACTGGGATCTTGAGCTTCGA+TGG 0.522302 2_3:+27136332 None:intergenic
CCGAACCTTATGGCATATGT+AGG 0.522757 2_3:-27139958 Msa0286240:CDS
AAACCTCAGCAGATAAGTGT+TGG 0.523110 2_3:-27136751 Msa0286240:CDS
CCAGAAAGTGCATACTGATC+CGG 0.524034 2_3:+27139322 None:intergenic
TCTGAAGCTGATGAGAAATA+CGG 0.527516 2_3:-27139716 Msa0286240:CDS
AACCTCAGCAGATAAGTGTT+GGG 0.527827 2_3:-27136750 Msa0286240:CDS
CAACAGAAGATGAAGGTGAT+AGG 0.529116 2_3:+27137542 None:intergenic
AAGCATGCAATATATCCAAA+AGG 0.529982 2_3:-27137268 Msa0286240:intron
AATAACTTCCCGCGACTACC+AGG 0.532194 2_3:-27139289 Msa0286240:CDS
AAGATATGGTATGGAGTACC+TGG 0.534279 2_3:-27138855 Msa0286240:CDS
GTTGCAGATATCAGCTAGAT+GGG 0.534301 2_3:-27140191 Msa0286240:intron
ATGTCCAAGTGTCACTTTCA+CGG 0.535146 2_3:-27136774 Msa0286240:CDS
TACTCTGCACACTGATGACT+GGG 0.536048 2_3:+27136315 None:intergenic
TTCCAAAACAAAGTACAAAA+GGG 0.537388 2_3:+27135819 None:intergenic
CCCTCGGAGGAGGAAATTGA+AGG 0.537610 2_3:-27139557 Msa0286240:CDS
CTGACAGGCAAGGATAAAGA+TGG 0.539724 2_3:-27138133 Msa0286240:intron
ATGACTATTTGACCTATCCC+TGG 0.541294 2_3:+27137720 None:intergenic
ATCCGGATAACCCTTAGGTA+TGG 0.541772 2_3:+27139339 None:intergenic
GGTGACTCAAAGATATGGTA+TGG 0.542015 2_3:-27138864 Msa0286240:CDS
ACTTTCATTTGGCGCACTAA+GGG 0.542373 2_3:+27137657 None:intergenic
ACCTTCAATTTCCTCCTCCG+AGG 0.543087 2_3:+27139556 None:intergenic
TACATTACCTGAACAATGGA+CGG 0.543477 2_3:+27136605 None:intergenic
CATGAAGAAACTGGTTGTGC+GGG 0.545026 2_3:-27137745 Msa0286240:CDS
GTTTGGGATCTGTTGTTCAT+GGG 0.546196 2_3:-27137306 Msa0286240:CDS
CAAGGTGGAACCCAACAAGC+TGG 0.548195 2_3:+27139926 None:intergenic
TACTGATCCGGATAACCCTT+AGG 0.548758 2_3:+27139334 None:intergenic
ATCAATTTGCTGAATACGGG+TGG 0.552299 2_3:+27139862 None:intergenic
CAAAGATATACTCGCGCTCG+TGG 0.552527 2_3:+27137381 None:intergenic
ATATGCCATAAGGTTCGGCT+AGG 0.552916 2_3:+27139963 None:intergenic
TCCATCAATTCTTAAAGATG+AGG 0.553059 2_3:-27138607 Msa0286240:CDS
ACAAGAGGTGGATGGAGACA+AGG 0.554199 2_3:-27137770 Msa0286240:CDS
ACAATCCTACATATGCCATA+AGG 0.556142 2_3:+27139953 None:intergenic
ATCACAGAGCAAAGGAGTCT+AGG 0.556463 2_3:-27136698 Msa0286240:CDS
CCATGCGTTAACCAATCGAC+AGG 0.557899 2_3:+27138468 None:intergenic
TTGGCGCACTAAGGGTTACA+AGG 0.559643 2_3:+27137665 None:intergenic
TAAAATGTTTCAGGTTACAA+TGG 0.561074 2_3:-27136801 Msa0286240:intron
TGACACTTCCTGGAGATGTA+GGG 0.563083 2_3:+27136274 None:intergenic
AAGTTTAGATAGTGATAACA+AGG 0.563978 2_3:-27137638 Msa0286240:CDS
CTTCTTCTAACAGCATGTTG+AGG 0.565189 2_3:-27138922 Msa0286240:intron
CAGAATGCTACCTTGAAAAG+AGG 0.566290 2_3:+27137058 None:intergenic
CATGAAGAGTTAGCTCTGCA+AGG 0.567369 2_3:+27138349 None:intergenic
ATAGGCCGACATGCTTCAGA+TGG 0.567817 2_3:+27140166 None:intergenic
GCAATAAATGATAAAATGCA+GGG 0.567915 2_3:-27135687 Msa0286240:three_prime_UTR
GATCAGGCTATAGGCAACAT+AGG 0.569394 2_3:-27136186 Msa0286240:CDS
AATTCTTGTACATTTGATGG+TGG 0.570192 2_3:-27137481 Msa0286240:CDS
TCTTTCTCCTTAAGAAGGCA+AGG 0.571859 2_3:+27139908 None:intergenic
TGTTTACATTACCTGAACAA+TGG 0.571970 2_3:+27136601 None:intergenic
AATACCTCAACTTCATCTGT+TGG 0.573597 2_3:+27139509 None:intergenic
ACCCACAATTGAACCCAGAA+TGG 0.575210 2_3:+27138520 None:intergenic
AATGGAATTGGATGCCAAAG+AGG 0.575222 2_3:-27141061 Msa0286240:intron
GGTTTCTGCCATGGCCAATG+AGG 0.575518 2_3:-27137806 Msa0286240:CDS
TTCCCAACACTTATCTGCTG+AGG 0.577377 2_3:+27136748 None:intergenic
AACTGGTTGTGCGGGAACCA+GGG 0.577770 2_3:-27137737 Msa0286240:CDS
GTACAGAACCTGGTAGTCGC+GGG 0.577977 2_3:+27139281 None:intergenic
AAATTGAAGGTGAATATTGG+CGG 0.578021 2_3:-27139544 Msa0286240:CDS
CCATCAATTCTTAAAGATGA+GGG 0.579325 2_3:-27138606 Msa0286240:CDS
GTCTTCACAACAGAAGATGA+AGG 0.582987 2_3:+27137535 None:intergenic
CATGCAAACCTCATTGGCCA+TGG 0.583584 2_3:+27137798 None:intergenic
CTAGTTCCATGGCTGTATGT+TGG 0.583650 2_3:-27139226 Msa0286240:CDS
GTTGTGCGGGAACCAGGGAT+AGG 0.585912 2_3:-27137732 Msa0286240:CDS
AATGTTTCAGGTTACAATGG+AGG 0.588047 2_3:-27136798 Msa0286240:intron
TGAATGTAGCTCCTGTCGAT+TGG 0.588215 2_3:-27138479 Msa0286240:CDS
TCTCAGGAGTACTAGTTCCA+TGG 0.597637 2_3:-27139237 Msa0286240:CDS
TTGTAAACTGTAAAGTTCAA+CGG 0.597924 2_3:+27138437 None:intergenic
AGAGCTAACTCTTCATGGAA+AGG 0.598601 2_3:-27138343 Msa0286240:CDS
TGCCATAAGGTTCGGCTAGG+GGG 0.604755 2_3:+27139966 None:intergenic
TTGCATGAACAAACAAGAGG+TGG 0.605359 2_3:-27137782 Msa0286240:CDS
TTGAAATGGAGAAGCTACTG+TGG 0.606319 2_3:-27138306 Msa0286240:CDS
TCATGAAGAAACTGGTTGTG+CGG 0.608614 2_3:-27137746 Msa0286240:CDS
ATGAAGAGTTAGCTCTGCAA+GGG 0.613991 2_3:+27138350 None:intergenic
GTTTCCGTGAAAGTGACACT+TGG 0.616503 2_3:+27136770 None:intergenic
AAACCGAAGGGAGCCCTCGG+AGG 0.616853 2_3:-27139570 Msa0286240:CDS
AGAAATACGGATTTCAAGCA+GGG 0.620076 2_3:-27139703 Msa0286240:CDS
AGTACAGAACCTGGTAGTCG+CGG 0.621060 2_3:+27139280 None:intergenic
AAAGTCTTTAAACGTGAAGT+CGG 0.621637 2_3:+27139679 None:intergenic
TATGCCATAAGGTTCGGCTA+GGG 0.624920 2_3:+27139964 None:intergenic
TGAAATGGAGAAGCTACTGT+GGG 0.625781 2_3:-27138305 Msa0286240:CDS
TGATGCTAAAGAAATTAACT+CGG 0.626787 2_3:+27137140 None:intergenic
ATTAGGTCAATGATGATCGA+GGG 0.628372 2_3:+27135864 None:intergenic
CCTGTCGATTGGTTAACGCA+TGG 0.630097 2_3:-27138468 Msa0286240:CDS
ATAGTAACCACCAAAACCGA+AGG 0.630250 2_3:-27139583 Msa0286240:CDS
CACATGCCAACATACAGCCA+TGG 0.631048 2_3:+27139220 None:intergenic
AAGGCATCATCCATACCTAA+GGG 0.631276 2_3:-27139349 Msa0286240:CDS
AATTAGGTCAATGATGATCG+AGG 0.632605 2_3:+27135863 None:intergenic
CAAGAGGTGGATGGAGACAA+GGG 0.632933 2_3:-27137769 Msa0286240:CDS
GGATAAAGATGGAAGAAGAG+AGG 0.633004 2_3:-27138122 Msa0286240:CDS
TCAAAACTTAGTACAGAACC+TGG 0.635235 2_3:+27139271 None:intergenic
ATGCCATAAGGTTCGGCTAG+GGG 0.638535 2_3:+27139965 None:intergenic
ACTCCAAATCAGGAACATGT+AGG 0.644682 2_3:-27139775 Msa0286240:CDS
TAACAAGGGTGATTCAGTAG+AGG 0.649779 2_3:-27137623 Msa0286240:CDS
CAGGCTATAGGCAACATAGG+AGG 0.652485 2_3:-27136183 Msa0286240:CDS
ATTGTAGGTGTACTATGGAG+CGG 0.652824 2_3:-27139407 Msa0286240:intron
GTGGAACCCAACAAGCTGGA+GGG 0.653359 2_3:+27139930 None:intergenic
GGTGGAACCCAACAAGCTGG+AGG 0.654238 2_3:+27139929 None:intergenic
GCAGCCAACAGATGAAGTTG+AGG 0.654708 2_3:-27139513 Msa0286240:intron
GGGATCCATCTGAAGCATGT+CGG 0.655114 2_3:-27140171 Msa0286240:CDS
TAGGGCTACTTGAACAACAT+AGG 0.657747 2_3:+27136235 None:intergenic
ATGAACAAACAAGAGGTGGA+TGG 0.659430 2_3:-27137778 Msa0286240:CDS
CATGTGACAATGATGTCTTA+CGG 0.661845 2_3:+27138412 None:intergenic
ATTTGATGGTGGAAAACTTG+AGG 0.662789 2_3:-27137470 Msa0286240:CDS
TTCTCCTTAAGAAGGCAAGG+TGG 0.663402 2_3:+27139911 None:intergenic
GTGACAAAATCACAGAGCAA+AGG 0.668780 2_3:-27136706 Msa0286240:CDS
CTGACGCACAATGTTCTGAG+TGG 0.675673 2_3:-27136074 Msa0286240:CDS
TAGTAACCACCAAAACCGAA+GGG 0.682346 2_3:-27139582 Msa0286240:CDS
GCAGAGTATTGGAATCACAA+AGG 0.682618 2_3:-27136300 Msa0286240:CDS
TTAAAATGACTATCCAACGT+CGG 0.698267 2_3:+27135974 None:intergenic
GGTTTGCATGAACAAACAAG+AGG 0.699245 2_3:-27137785 Msa0286240:CDS
AGTTTAGATAGTGATAACAA+GGG 0.701359 2_3:-27137637 Msa0286240:CDS
TCGAACTGTTCAGCACTCTG+GGG 0.722408 2_3:-27138571 Msa0286240:CDS
AAATGCAGGGAAACTACACA+CGG 0.725422 2_3:-27135674 Msa0286240:three_prime_UTR
GAAAGATGGAGTTCTTACCA+AGG 0.732357 2_3:-27138283 Msa0286240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAGTTGTAAATTAAACAA+TGG + chr2_3:27137256-27137275 None:intergenic 15.0%
!!! TGTTTAATTTACAACTATAT+TGG - chr2_3:27137257-27137276 Msa0286240:intron 15.0%
!! AAAGTTCAAAAAATTTGAAA+TGG - chr2_3:27138411-27138430 Msa0286240:CDS 15.0%
!! AAAAGACAATTAAAAAAGAA+CGG + chr2_3:27138500-27138519 None:intergenic 15.0%
!!! AGTTTAATTTTAAAACGTTT+TGG - chr2_3:27139545-27139564 Msa0286240:CDS 15.0%
!!! TATGATTTCATTTTTAAACT+CGG + chr2_3:27139714-27139733 None:intergenic 15.0%
!!! GGTTAATTTATATATTTTGT+CGG + chr2_3:27139848-27139867 None:intergenic 15.0%
!! AAAATTAATACCAAAAACTT+TGG + chr2_3:27140522-27140541 None:intergenic 15.0%
!!! TTTTAATTTAGTCATAAGTT+AGG - chr2_3:27140774-27140793 Msa0286240:intron 15.0%
!!! TATGAGTTTTTATCTTTCAT+AGG - chr2_3:27135947-27135966 Msa0286240:three_prime_UTR 20.0%
!!! ATGAGTTTTTATCTTTCATA+GGG - chr2_3:27135948-27135967 Msa0286240:three_prime_UTR 20.0%
!! TGCAAGAATTCTAATTTAAT+GGG + chr2_3:27136210-27136229 None:intergenic 20.0%
!! ATGCAAGAATTCTAATTTAA+TGG + chr2_3:27136211-27136230 None:intergenic 20.0%
!! TTCAACAACAAAACAAATAT+TGG + chr2_3:27136433-27136452 None:intergenic 20.0%
!!! TCTATTCTTTTTTCATATGT+TGG - chr2_3:27136503-27136522 Msa0286240:intron 20.0%
!!! TAAAAAAGTACTTCAATAGT+TGG + chr2_3:27136616-27136635 None:intergenic 20.0%
!! AATATGTCAACATAAATAAG+TGG + chr2_3:27137701-27137720 None:intergenic 20.0%
!! GAAATGCAAAATTAAAGATA+AGG + chr2_3:27137760-27137779 None:intergenic 20.0%
!! AAGAAGAAAATAGTGAAAAT+GGG + chr2_3:27137795-27137814 None:intergenic 20.0%
!!! ATTTTGGGAATTGTTTTATA+TGG - chr2_3:27138064-27138083 Msa0286240:CDS 20.0%
!!! TTGTTCTTATTTAGTTACAA+AGG - chr2_3:27138532-27138551 Msa0286240:CDS 20.0%
!! TTAAGACAAGAATATTTATC+AGG + chr2_3:27138761-27138780 None:intergenic 20.0%
!!! ACTTTTTCAACTACAATTTT+CGG + chr2_3:27139322-27139341 None:intergenic 20.0%
!! TTCAAAAGTAAACTAATCAA+TGG + chr2_3:27139526-27139545 None:intergenic 20.0%
!! TAATTAGAAAAACTACAAAC+AGG + chr2_3:27140195-27140214 None:intergenic 20.0%
!! AATTTAACTGAAGAAATTTC+TGG - chr2_3:27140815-27140834 Msa0286240:intron 20.0%
!! ATTTAACTGAAGAAATTTCT+GGG - chr2_3:27140816-27140835 Msa0286240:intron 20.0%
! TTGAATGAAACAAATGGAAT+TGG - chr2_3:27135658-27135677 Msa0286240:three_prime_UTR 25.0%
! AGAAATCATATGCATTGTTA+GGG + chr2_3:27135709-27135728 None:intergenic 25.0%
!!! TTATCTGTGTTCATTGATTT+TGG - chr2_3:27135799-27135818 Msa0286240:three_prime_UTR 25.0%
!! TTTTTATCTTTCATAGGGTT+TGG - chr2_3:27135953-27135972 Msa0286240:three_prime_UTR 25.0%
!! TTAGAAATTTTCATGTGATG+CGG - chr2_3:27135981-27136000 Msa0286240:three_prime_UTR 25.0%
! ATAAAAAACCGATGCATTAA+AGG + chr2_3:27136159-27136178 None:intergenic 25.0%
!!! GAATTCTTGCATATTTTTTC+AGG - chr2_3:27136219-27136238 Msa0286240:CDS 25.0%
!!! TTTTTACTTCTAAGACTTTC+AGG + chr2_3:27136292-27136311 None:intergenic 25.0%
! TGAAAGTCTTAGAAGTAAAA+AGG - chr2_3:27136291-27136310 Msa0286240:CDS 25.0%
!! GCAAGAAAAGTACAAAATAT+TGG + chr2_3:27136352-27136371 None:intergenic 25.0%
!! TCATTGACTACGTTATATAT+TGG + chr2_3:27136468-27136487 None:intergenic 25.0%
! CGATATAAACAATATGAAGA+TGG + chr2_3:27136648-27136667 None:intergenic 25.0%
! AAATATCTTTCTCCTTAAGA+AGG + chr2_3:27136831-27136850 None:intergenic 25.0%
! TTCTTAAGGAGAAAGATATT+TGG - chr2_3:27136830-27136849 Msa0286240:intron 25.0%
! TCTTAAGGAGAAAGATATTT+GGG - chr2_3:27136831-27136850 Msa0286240:intron 25.0%
!!! TAAATCAATTTGCTGAATAC+GGG + chr2_3:27136875-27136894 None:intergenic 25.0%
!!! GTAAATCAATTTGCTGAATA+CGG + chr2_3:27136876-27136895 None:intergenic 25.0%
! AACCTATGAAGAAAAAAAGT+AGG - chr2_3:27136908-27136927 Msa0286240:intron 25.0%
! ACCTATGAAGAAAAAAAGTA+GGG - chr2_3:27136909-27136928 Msa0286240:intron 25.0%
! ACAATACACTCTTATATTGT+AGG - chr2_3:27137309-27137328 Msa0286240:CDS 25.0%
! AACATAAATAAGTGGAATAC+AGG + chr2_3:27137693-27137712 None:intergenic 25.0%
! TGTTGACATATTTCAAATGT+TGG - chr2_3:27137709-27137728 Msa0286240:CDS 25.0%
! GAAGAAGAAAATAGTGAAAA+TGG + chr2_3:27137796-27137815 None:intergenic 25.0%
! TTGTAAACTGTAAAGTTCAA+CGG + chr2_3:27138297-27138316 None:intergenic 25.0%
! TTATGGGAAAGTAAAAACTT+CGG - chr2_3:27138899-27138918 Msa0286240:CDS 25.0%
! TCACTATCTAAACTTTCATT+TGG + chr2_3:27139088-27139107 None:intergenic 25.0%
! AAGTTTAGATAGTGATAACA+AGG - chr2_3:27139093-27139112 Msa0286240:intron 25.0%
! AGTTTAGATAGTGATAACAA+GGG - chr2_3:27139094-27139113 Msa0286240:intron 25.0%
! ATGTTGTTCAGAGATAAAAA+AGG - chr2_3:27139138-27139157 Msa0286240:intron 25.0%
! TGATGCTAAAGAAATTAACT+CGG + chr2_3:27139594-27139613 None:intergenic 25.0%
!!! TTTCATTTTTAAACTCGGTA+CGG + chr2_3:27139709-27139728 None:intergenic 25.0%
! TAAAAAACTAACGAAGTTTG+TGG + chr2_3:27139782-27139801 None:intergenic 25.0%
!! AACCAACTATATGAGTTTTA+TGG - chr2_3:27139864-27139883 Msa0286240:CDS 25.0%
! AACCATAAAACTCATATAGT+TGG + chr2_3:27139869-27139888 None:intergenic 25.0%
! CTTATTCCATAAAATGTTTC+AGG - chr2_3:27139921-27139940 Msa0286240:CDS 25.0%
!! TTGTAACCTGAAACATTTTA+TGG + chr2_3:27139930-27139949 None:intergenic 25.0%
!!! TAAAATGTTTCAGGTTACAA+TGG - chr2_3:27139930-27139949 Msa0286240:CDS 25.0%
!!! ATTAACGGTTTTAGAATGTT+CGG - chr2_3:27140093-27140112 Msa0286240:intron 25.0%
! GAACTAATACGTGTATAATT+TGG - chr2_3:27140314-27140333 Msa0286240:intron 25.0%
! TAATACCAAAAACTTTGGTA+GGG + chr2_3:27140517-27140536 None:intergenic 25.0%
! TTAATACCAAAAACTTTGGT+AGG + chr2_3:27140518-27140537 None:intergenic 25.0%
!! TGGTATTAATTTTACTGATC+AGG - chr2_3:27140529-27140548 Msa0286240:intron 25.0%
! GATGAAATCAATACTACAAA+AGG - chr2_3:27140592-27140611 Msa0286240:intron 25.0%
! TTCCAAAACAAAGTACAAAA+GGG + chr2_3:27140915-27140934 None:intergenic 25.0%
! ATTCCAAAACAAAGTACAAA+AGG + chr2_3:27140916-27140935 None:intergenic 25.0%
! TGCAATAAATGATAAAATGC+AGG - chr2_3:27141043-27141062 Msa0286240:intron 25.0%
! GCAATAAATGATAAAATGCA+GGG - chr2_3:27141044-27141063 Msa0286240:intron 25.0%
GTTTGAAAATCTAACCTCTT+TGG + chr2_3:27135687-27135706 None:intergenic 30.0%
GAGAAATCATATGCATTGTT+AGG + chr2_3:27135710-27135729 None:intergenic 30.0%
TAACATTGTATCTCTGTTTC+TGG - chr2_3:27135871-27135890 Msa0286240:three_prime_UTR 30.0%
GAAAGATAAAAACTCATAGC+TGG + chr2_3:27135945-27135964 None:intergenic 30.0%
GTCATCTACATATGTGATAT+TGG - chr2_3:27136051-27136070 Msa0286240:CDS 30.0%
! AAGTAAAAAGGTATGTAGCT+AGG - chr2_3:27136303-27136322 Msa0286240:CDS 30.0%
TTCCTATTTGTTCCAAAGAA+CGG + chr2_3:27136374-27136393 None:intergenic 30.0%
TCAATAGTTGGATGAAAAAC+AGG + chr2_3:27136604-27136623 None:intergenic 30.0%
CCTATGAAGAAAAAAAGTAG+GGG - chr2_3:27136910-27136929 Msa0286240:intron 30.0%
AAAGTCTTTAAACGTGAAGT+CGG + chr2_3:27137055-27137074 None:intergenic 30.0%
!! ACTTTAAGGAATGCTACTTT+GGG - chr2_3:27137091-27137110 Msa0286240:CDS 30.0%
TTGAAAGATGCAAATGAAGA+TGG - chr2_3:27137114-27137133 Msa0286240:CDS 30.0%
AGGAAATTGAAGGTGAATAT+TGG - chr2_3:27137184-27137203 Msa0286240:intron 30.0%
AAATTGAAGGTGAATATTGG+CGG - chr2_3:27137187-27137206 Msa0286240:intron 30.0%
CTTATATTGTAGGTGTACTA+TGG - chr2_3:27137319-27137338 Msa0286240:CDS 30.0%
! ATTTGGAAGTGGTTTTTCTA+AGG - chr2_3:27137363-27137382 Msa0286240:CDS 30.0%
GTAGATAATTAAGCGAATAG+AGG + chr2_3:27137842-27137861 None:intergenic 30.0%
TCGCTTAATTATCTACACTT+TGG - chr2_3:27137846-27137865 Msa0286240:CDS 30.0%
! CAGAACTTTCACTAGATTTT+GGG - chr2_3:27138049-27138068 Msa0286240:CDS 30.0%
TCCATCAATTCTTAAAGATG+AGG - chr2_3:27138124-27138143 Msa0286240:CDS 30.0%
CCATCAATTCTTAAAGATGA+GGG - chr2_3:27138125-27138144 Msa0286240:CDS 30.0%
!! AATTTGTCATTACTTTTCCG+AGG - chr2_3:27138183-27138202 Msa0286240:intron 30.0%
!! ATTTGTCATTACTTTTCCGA+GGG - chr2_3:27138184-27138203 Msa0286240:intron 30.0%
! TCACATGACAAGCTTTTATT+TGG - chr2_3:27138335-27138354 Msa0286240:CDS 30.0%
AATCATTACCTTAAATGCCT+TGG + chr2_3:27138468-27138487 None:intergenic 30.0%
! TGATTCCTTATATGCTTTTC+TGG - chr2_3:27138562-27138581 Msa0286240:CDS 30.0%
GACTTATATCTATCTACTGT+CGG - chr2_3:27138722-27138741 Msa0286240:intron 30.0%
AAAAAAGGAACAAGACAACA+TGG - chr2_3:27139153-27139172 Msa0286240:intron 30.0%
CACAATTCTTGTACATTTGA+TGG - chr2_3:27139247-27139266 Msa0286240:CDS 30.0%
AATTCTTGTACATTTGATGG+TGG - chr2_3:27139250-27139269 Msa0286240:CDS 30.0%
AAGCATGCAATATATCCAAA+AGG - chr2_3:27139463-27139482 Msa0286240:intron 30.0%
!! ACGTTTTGGTAAACTTTTGA+AGG - chr2_3:27139559-27139578 Msa0286240:CDS 30.0%
TGTTTACATTACCTGAACAA+TGG + chr2_3:27140133-27140152 None:intergenic 30.0%
CTGGATTAACATGCTTATTA+CGG - chr2_3:27140266-27140285 Msa0286240:intron 30.0%
! AATTTTACTGATCAGGCTAT+AGG - chr2_3:27140536-27140555 Msa0286240:intron 30.0%
! ATTCAGAAAGCTTTGTAGAT+AGG - chr2_3:27140710-27140729 Msa0286240:intron 30.0%
TTAAAATGACTATCCAACGT+CGG + chr2_3:27140760-27140779 None:intergenic 30.0%
CAAGTACCAAAATTTCATCT+AGG + chr2_3:27140847-27140866 None:intergenic 30.0%
TGCAAAATGCATCTGTAATT+AGG + chr2_3:27140887-27140906 None:intergenic 30.0%
!!! CTCTTATCCTCTGTTTTTTG+TGG - chr2_3:27135751-27135770 Msa0286240:three_prime_UTR 35.0%
TTGTGATCCACAAAAAACAG+AGG + chr2_3:27135761-27135780 None:intergenic 35.0%
ACACATAGGTCGAAAAACAA+GGG + chr2_3:27135922-27135941 None:intergenic 35.0%
AAAAACCGATGCATTAAAGG+AGG + chr2_3:27136156-27136175 None:intergenic 35.0%
!!! TTTTTCAGGATAGTCCTCTT+CGG - chr2_3:27136233-27136252 Msa0286240:CDS 35.0%
! TCAAGTGCATTGTCCTTTTT+AGG + chr2_3:27136265-27136284 None:intergenic 35.0%
ACAGGTGCTTCATCAATTAT+AGG + chr2_3:27136586-27136605 None:intergenic 35.0%
TTTGTTTACTCTGTTTCCTC+AGG - chr2_3:27136705-27136724 Msa0286240:CDS 35.0%
AATGTATCTTCAAACTCCTG+AGG + chr2_3:27136724-27136743 None:intergenic 35.0%
ACAATCCTACATATGCCATA+AGG + chr2_3:27136781-27136800 None:intergenic 35.0%
!!! CCCCTACTTTTTTTCTTCAT+AGG + chr2_3:27136913-27136932 None:intergenic 35.0%
TGAAGAAAAAAAGTAGGGGA+AGG - chr2_3:27136914-27136933 Msa0286240:intron 35.0%
! ATTAGCTTCAGAAGCTGATT+TGG + chr2_3:27136989-27137008 None:intergenic 35.0%
! TCTGAAGCTGATGAGAAATA+CGG - chr2_3:27137015-27137034 Msa0286240:intron 35.0%
AGAAATACGGATTTCAAGCA+GGG - chr2_3:27137028-27137047 Msa0286240:intron 35.0%
CAAAGTAGCATTCCTTAAAG+TGG + chr2_3:27137092-27137111 None:intergenic 35.0%
! CACTTTAAGGAATGCTACTT+TGG - chr2_3:27137090-27137109 Msa0286240:CDS 35.0%
AATACCTCAACTTCATCTGT+TGG + chr2_3:27137225-27137244 None:intergenic 35.0%
TCAAAACTTAGTACAGAACC+TGG + chr2_3:27137463-27137482 None:intergenic 35.0%
!! GGTTCTGTACTAAGTTTTGA+AGG - chr2_3:27137463-27137482 Msa0286240:CDS 35.0%
! TGTGCTTTTCATCGTTTTGT+TGG - chr2_3:27137530-27137549 Msa0286240:CDS 35.0%
!! GTGCTTTTCATCGTTTTGTT+GGG - chr2_3:27137531-27137550 Msa0286240:CDS 35.0%
! ACAGAGTTTAAGACATGACA+TGG - chr2_3:27137600-27137619 Msa0286240:CDS 35.0%
TCGAGAGATAAAAGACATAC+AGG + chr2_3:27137667-27137686 None:intergenic 35.0%
! ACTTTGGTGACTCAAAGATA+TGG - chr2_3:27137862-27137881 Msa0286240:CDS 35.0%
!!! CATTTTCTAAAGCAGAAGCA+TGG + chr2_3:27137905-27137924 None:intergenic 35.0%
ACCAAATCTACTCAATGATC+TGG - chr2_3:27137962-27137981 Msa0286240:CDS 35.0%
ACCAGATCATTGAGTAGATT+TGG + chr2_3:27137966-27137985 None:intergenic 35.0%
CCAAAATCTAGTGAAAGTTC+TGG + chr2_3:27138051-27138070 None:intergenic 35.0%
! CCAGAACTTTCACTAGATTT+TGG - chr2_3:27138048-27138067 Msa0286240:CDS 35.0%
! TATGATTTTCATGTTCACGC+AGG - chr2_3:27138088-27138107 Msa0286240:CDS 35.0%
! CCCTCATCTTTAAGAATTGA+TGG + chr2_3:27138128-27138147 None:intergenic 35.0%
!! TTTGTCATTACTTTTCCGAG+GGG - chr2_3:27138185-27138204 Msa0286240:intron 35.0%
TGTAAAGTTCAACGGCATTT+AGG + chr2_3:27138289-27138308 None:intergenic 35.0%
CATGTGACAATGATGTCTTA+CGG + chr2_3:27138322-27138341 None:intergenic 35.0%
! AGTTCTTACCAAGGCATTTA+AGG - chr2_3:27138457-27138476 Msa0286240:CDS 35.0%
! GGTAACCAGAAAAGCATATA+AGG + chr2_3:27138570-27138589 None:intergenic 35.0%
TTCAGCGACTTAAAATGAGT+TGG + chr2_3:27138647-27138666 None:intergenic 35.0%
!! TCATTTTAAGTCGCTGAAGA+TGG - chr2_3:27138649-27138668 Msa0286240:intron 35.0%
!! CATTTTAAGTCGCTGAAGAT+GGG - chr2_3:27138650-27138669 Msa0286240:intron 35.0%
! AAATTGCTTGAAGCACTAGA+AGG - chr2_3:27138857-27138876 Msa0286240:CDS 35.0%
ATTCACTTGCTCTTGAGTTA+TGG - chr2_3:27138882-27138901 Msa0286240:CDS 35.0%
TTCACTTGCTCTTGAGTTAT+GGG - chr2_3:27138883-27138902 Msa0286240:CDS 35.0%
TTTGTTCATGCAAACCTCAT+TGG + chr2_3:27138942-27138961 None:intergenic 35.0%
!! ATTTGATGGTGGAAAACTTG+AGG - chr2_3:27139261-27139280 Msa0286240:CDS 35.0%
TTCTGTCAAGCCTATAAGTT+TGG - chr2_3:27139408-27139427 Msa0286240:intron 35.0%
TCTGTCAAGCCTATAAGTTT+GGG - chr2_3:27139409-27139428 Msa0286240:intron 35.0%
ACAACAGATCCCAAACTTAT+AGG + chr2_3:27139421-27139440 None:intergenic 35.0%
ACATAGCTACAGATTCTTGT+TGG + chr2_3:27139622-27139641 None:intergenic 35.0%
!! GTTTCTGAAGTAATTGATGC+TGG - chr2_3:27139640-27139659 Msa0286240:CDS 35.0%
CCATGAACGGTAAATAAAAG+AGG + chr2_3:27139759-27139778 None:intergenic 35.0%
!! CCTCTTTTATTTACCGTTCA+TGG - chr2_3:27139756-27139775 Msa0286240:CDS 35.0%
!! AATGTTTCAGGTTACAATGG+AGG - chr2_3:27139933-27139952 Msa0286240:CDS 35.0%
! AATGCTTTTCAGAAGCTCTA+AGG + chr2_3:27140076-27140095 None:intergenic 35.0%
!! GAGCTTCTGAAAAGCATTAA+CGG - chr2_3:27140078-27140097 Msa0286240:intron 35.0%
TACATTACCTGAACAATGGA+CGG + chr2_3:27140129-27140148 None:intergenic 35.0%
TAATCCAGTTCAACGCAATT+TGG + chr2_3:27140254-27140273 None:intergenic 35.0%
!! ATGTTCCGACTAACTTTTTC+AGG - chr2_3:27140376-27140395 Msa0286240:intron 35.0%
! GTGAAGCCTAGATGAAATTT+TGG - chr2_3:27140838-27140857 Msa0286240:intron 35.0%
ATTAGGTCAATGATGATCGA+GGG + chr2_3:27140870-27140889 None:intergenic 35.0%
AATTAGGTCAATGATGATCG+AGG + chr2_3:27140871-27140890 None:intergenic 35.0%
!! GACCCTTTTGTACTTTGTTT+TGG - chr2_3:27140910-27140929 Msa0286240:intron 35.0%
!!! GTTTTGGAATTTGCCTTTCA+AGG - chr2_3:27140926-27140945 Msa0286240:intron 35.0%
GAATTTGCCTTTCAAGGTTA+AGG - chr2_3:27140932-27140951 Msa0286240:intron 35.0%
!! TTAGCTTTTGCTCGAATCAT+AGG - chr2_3:27140957-27140976 Msa0286240:intron 35.0%
AATGGAATTGGATGCCAAAG+AGG - chr2_3:27135670-27135689 Msa0286240:three_prime_UTR 40.0%
GACACATAGGTCGAAAAACA+AGG + chr2_3:27135923-27135942 None:intergenic 40.0%
AAACTCATAGCTGGACACAT+AGG + chr2_3:27135936-27135955 None:intergenic 40.0%
TTCATGTGATGCGGTTGATT+AGG - chr2_3:27135990-27136009 Msa0286240:three_prime_UTR 40.0%
! GATGCGGTTGATTAGGTTTT+CGG - chr2_3:27135997-27136016 Msa0286240:three_prime_UTR 40.0%
TTCATGTGATGCGGTTGATT+AGG - chr2_3:27135990-27136009 Msa0286240:three_prime_UTR 40.0%
! GATGCGGTTGATTAGGTTTT+CGG - chr2_3:27135997-27136016 Msa0286240:three_prime_UTR 40.0%
CGTTTCCTCCTTTAATGCAT+CGG - chr2_3:27136148-27136167 Msa0286240:CDS 40.0%
! GTACTTTTCTTGCCGTTCTT+TGG - chr2_3:27136359-27136378 Msa0286240:intron 40.0%
!! TGCCGTTCTTTGGAACAAAT+AGG - chr2_3:27136369-27136388 Msa0286240:intron 40.0%
TGTTGCAGATATCAGCTAGA+TGG - chr2_3:27136539-27136558 Msa0286240:intron 40.0%
GTTGCAGATATCAGCTAGAT+GGG - chr2_3:27136540-27136559 Msa0286240:intron 40.0%
CCTACATATGCCATAAGGTT+CGG + chr2_3:27136776-27136795 None:intergenic 40.0%
TCTTTCTCCTTAAGAAGGCA+AGG + chr2_3:27136826-27136845 None:intergenic 40.0%
CTGAATACGGGTGGAAAATT+CGG + chr2_3:27136863-27136882 None:intergenic 40.0%
!! ATCAATTTGCTGAATACGGG+TGG + chr2_3:27136872-27136891 None:intergenic 40.0%
ACTCCAAATCAGGAACATGT+AGG - chr2_3:27136956-27136975 Msa0286240:intron 40.0%
TCTCCTACATGTTCCTGATT+TGG + chr2_3:27136962-27136981 None:intergenic 40.0%
GAGAAATACGGATTTCAAGC+AGG - chr2_3:27137027-27137046 Msa0286240:intron 40.0%
! GCAATATGCTAGCCACTTTA+AGG - chr2_3:27137077-27137096 Msa0286240:CDS 40.0%
ATAGTAACCACCAAAACCGA+AGG - chr2_3:27137148-27137167 Msa0286240:CDS 40.0%
TAGTAACCACCAAAACCGAA+GGG - chr2_3:27137149-27137168 Msa0286240:CDS 40.0%
ATTGTAGGTGTACTATGGAG+CGG - chr2_3:27137324-27137343 Msa0286240:CDS 40.0%
! GACTTGGAAACTGGAGTATT+TGG - chr2_3:27137346-27137365 Msa0286240:CDS 40.0%
! GAAACTGGAGTATTTGGAAG+TGG - chr2_3:27137352-27137371 Msa0286240:CDS 40.0%
! TAAGGCATCATCCATACCTA+AGG - chr2_3:27137381-27137400 Msa0286240:CDS 40.0%
! AAGGCATCATCCATACCTAA+GGG - chr2_3:27137382-27137401 Msa0286240:CDS 40.0%
ATCCATACCTAAGGGTTATC+CGG - chr2_3:27137390-27137409 Msa0286240:CDS 40.0%
! ATCAGTATGCACTTTCTGGT+TGG - chr2_3:27137413-27137432 Msa0286240:CDS 40.0%
TTTGAAGGAAGTGACATCTC+AGG - chr2_3:27137478-27137497 Msa0286240:CDS 40.0%
!! TCATCGTTTTGTTGGGTAAG+TGG - chr2_3:27137538-27137557 Msa0286240:CDS 40.0%
CTTCTTCTAACAGCATGTTG+AGG - chr2_3:27137809-27137828 Msa0286240:CDS 40.0%
GGTGACTCAAAGATATGGTA+TGG - chr2_3:27137867-27137886 Msa0286240:CDS 40.0%
! AAGATATGGTATGGAGTACC+TGG - chr2_3:27137876-27137895 Msa0286240:CDS 40.0%
GGTACTTCCTCAAACAAATC+AGG + chr2_3:27137945-27137964 None:intergenic 40.0%
CCTGCTATACACACAATGAT+AGG + chr2_3:27138011-27138030 None:intergenic 40.0%
CCTATCATTGTGTGTATAGC+AGG - chr2_3:27138008-27138027 Msa0286240:CDS 40.0%
TGCTGAACAGTTCGATATAC+GGG + chr2_3:27138155-27138174 None:intergenic 40.0%
GTGCTGAACAGTTCGATATA+CGG + chr2_3:27138156-27138175 None:intergenic 40.0%
!! TTGTCATTACTTTTCCGAGG+GGG - chr2_3:27138186-27138205 Msa0286240:intron 40.0%
TACCATTCTGGGTTCAATTG+TGG - chr2_3:27138209-27138228 Msa0286240:intron 40.0%
ACCATTCTGGGTTCAATTGT+GGG - chr2_3:27138210-27138229 Msa0286240:intron 40.0%
!! GCTTTTATTTGGATCATCGC+TGG - chr2_3:27138346-27138365 Msa0286240:CDS 40.0%
!! ATGAAGAGTTAGCTCTGCAA+GGG + chr2_3:27138384-27138403 None:intergenic 40.0%
AGAGCTAACTCTTCATGGAA+AGG - chr2_3:27138388-27138407 Msa0286240:CDS 40.0%
TTGAAATGGAGAAGCTACTG+TGG - chr2_3:27138425-27138444 Msa0286240:CDS 40.0%
TGAAATGGAGAAGCTACTGT+GGG - chr2_3:27138426-27138445 Msa0286240:CDS 40.0%
GAAAGATGGAGTTCTTACCA+AGG - chr2_3:27138448-27138467 Msa0286240:CDS 40.0%
GGATAAAGATGGAAGAAGAG+AGG - chr2_3:27138609-27138628 Msa0286240:CDS 40.0%
TTTGTTCTGCTCATGCGAAA+TGG - chr2_3:27138790-27138809 Msa0286240:CDS 40.0%
GGAAAGTAAAAACTTCGGAC+TGG - chr2_3:27138904-27138923 Msa0286240:CDS 40.0%
GGTTTGCATGAACAAACAAG+AGG - chr2_3:27138946-27138965 Msa0286240:intron 40.0%
TTGCATGAACAAACAAGAGG+TGG - chr2_3:27138949-27138968 Msa0286240:intron 40.0%
ATGAACAAACAAGAGGTGGA+TGG - chr2_3:27138953-27138972 Msa0286240:intron 40.0%
TCATGAAGAAACTGGTTGTG+CGG - chr2_3:27138985-27139004 Msa0286240:intron 40.0%
ATGACTATTTGACCTATCCC+TGG + chr2_3:27139014-27139033 None:intergenic 40.0%
ACTTTCATTTGGCGCACTAA+GGG + chr2_3:27139077-27139096 None:intergenic 40.0%
AACTTTCATTTGGCGCACTA+AGG + chr2_3:27139078-27139097 None:intergenic 40.0%
TAACAAGGGTGATTCAGTAG+AGG - chr2_3:27139108-27139127 Msa0286240:intron 40.0%
CAACAGAAGATGAAGGTGAT+AGG + chr2_3:27139192-27139211 None:intergenic 40.0%
GTCTTCACAACAGAAGATGA+AGG + chr2_3:27139199-27139218 None:intergenic 40.0%
CAGAAGTTTCATCATGCTCT+AGG - chr2_3:27139218-27139237 Msa0286240:CDS 40.0%
! AGTTTGGGATCTGTTGTTCA+TGG - chr2_3:27139424-27139443 Msa0286240:intron 40.0%
! GTTTGGGATCTGTTGTTCAT+GGG - chr2_3:27139425-27139444 Msa0286240:intron 40.0%
! ATCCAAAAGGTATGCTGTAG+TGG - chr2_3:27139476-27139495 Msa0286240:intron 40.0%
! TCCAAAAGGTATGCTGTAGT+GGG - chr2_3:27139477-27139496 Msa0286240:intron 40.0%
!! TGCTGTAGTGGGATCTTTTA+TGG - chr2_3:27139488-27139507 Msa0286240:intron 40.0%
GTAATTGATGCTGGACTTCT+AGG - chr2_3:27139649-27139668 Msa0286240:CDS 40.0%
!!! ACTTCTAGGACCTCTTTTCA+AGG - chr2_3:27139663-27139682 Msa0286240:CDS 40.0%
CAGAATGCTACCTTGAAAAG+AGG + chr2_3:27139676-27139695 None:intergenic 40.0%
!! CTCTTTTCAAGGTAGCATTC+TGG - chr2_3:27139674-27139693 Msa0286240:CDS 40.0%
TTAAACTCGGTACGGAAACA+AGG + chr2_3:27139701-27139720 None:intergenic 40.0%
!! ATGTCCAAGTGTCACTTTCA+CGG - chr2_3:27139957-27139976 Msa0286240:CDS 40.0%
AAACCTCAGCAGATAAGTGT+TGG - chr2_3:27139980-27139999 Msa0286240:CDS 40.0%
AACCTCAGCAGATAAGTGTT+GGG - chr2_3:27139981-27140000 Msa0286240:CDS 40.0%
GTGACAAAATCACAGAGCAA+AGG - chr2_3:27140025-27140044 Msa0286240:intron 40.0%
!!! CTTTTCAGAAGCTCTAAGGA+AGG + chr2_3:27140072-27140091 None:intergenic 40.0%
AGTTCAACGCAATTTGGTAG+AGG + chr2_3:27140248-27140267 None:intergenic 40.0%
TCTACCAAATTGCGTTGAAC+TGG - chr2_3:27140247-27140266 Msa0286240:intron 40.0%
GATGGCCTGAAAAAGTTAGT+CGG + chr2_3:27140384-27140403 None:intergenic 40.0%
!! GCAGAGTATTGGAATCACAA+AGG - chr2_3:27140431-27140450 Msa0286240:intron 40.0%
TAGGGCTACTTGAACAACAT+AGG + chr2_3:27140499-27140518 None:intergenic 40.0%
! AGTAGCCCTACCAAAGTTTT+TGG - chr2_3:27140509-27140528 Msa0286240:intron 40.0%
ATCTCAATTCTTTCCGACGT+TGG - chr2_3:27140744-27140763 Msa0286240:intron 40.0%
GCTAAAGCCTTAACCTTGAA+AGG + chr2_3:27140942-27140961 None:intergenic 40.0%
AAATGCAGGGAAACTACACA+CGG - chr2_3:27141057-27141076 Msa0286240:intron 40.0%
! GGTTTTCGGTTCATGTGATG+CGG - chr2_3:27136011-27136030 Msa0286240:exon 45.0%
!! TTTTTAGGCTTGTGCCGAAG+AGG + chr2_3:27136250-27136269 None:intergenic 45.0%
TCTTCGGCACAAGCCTAAAA+AGG - chr2_3:27136249-27136268 Msa0286240:CDS 45.0%
TATGCCATAAGGTTCGGCTA+GGG + chr2_3:27136770-27136789 None:intergenic 45.0%
ATATGCCATAAGGTTCGGCT+AGG + chr2_3:27136771-27136790 None:intergenic 45.0%
CCGAACCTTATGGCATATGT+AGG - chr2_3:27136773-27136792 Msa0286240:CDS 45.0%
TTCTCCTTAAGAAGGCAAGG+TGG + chr2_3:27136823-27136842 None:intergenic 45.0%
GAAGGAAGCGAAAACGTAGA+AGG - chr2_3:27136932-27136951 Msa0286240:intron 45.0%
CGTAGAAGGAACTCCAAATC+AGG - chr2_3:27136946-27136965 Msa0286240:intron 45.0%
ATCCGGATAACCCTTAGGTA+TGG + chr2_3:27137395-27137414 None:intergenic 45.0%
TACTGATCCGGATAACCCTT+AGG + chr2_3:27137400-27137419 None:intergenic 45.0%
! CCAGAAAGTGCATACTGATC+CGG + chr2_3:27137412-27137431 None:intergenic 45.0%
!! TCTCAGGAGTACTAGTTCCA+TGG - chr2_3:27137494-27137513 Msa0286240:CDS 45.0%
CTAGTTCCATGGCTGTATGT+TGG - chr2_3:27137505-27137524 Msa0286240:CDS 45.0%
CAGGCTATCGAGAGAGAAAA+AGG + chr2_3:27137648-27137667 None:intergenic 45.0%
!! GCACTTGCCTGATTTGTTTG+AGG - chr2_3:27137935-27137954 Msa0286240:CDS 45.0%
TATCGAACTGTTCAGCACTC+TGG - chr2_3:27138158-27138177 Msa0286240:intron 45.0%
ATCGAACTGTTCAGCACTCT+GGG - chr2_3:27138159-27138178 Msa0286240:intron 45.0%
ACCCACAATTGAACCCAGAA+TGG + chr2_3:27138214-27138233 None:intergenic 45.0%
TGAATGTAGCTCCTGTCGAT+TGG - chr2_3:27138252-27138271 Msa0286240:intron 45.0%
!! CATGAAGAGTTAGCTCTGCA+AGG + chr2_3:27138385-27138404 None:intergenic 45.0%
CTTGCAGAGCTAACTCTTCA+TGG - chr2_3:27138383-27138402 Msa0286240:CDS 45.0%
AGAAGCTACTGTGGGAAAGA+TGG - chr2_3:27138434-27138453 Msa0286240:CDS 45.0%
!! GGTTACCTGTTTTTCCTGAC+AGG - chr2_3:27138583-27138602 Msa0286240:CDS 45.0%
CATCTTTATCCTTGCCTGTC+AGG + chr2_3:27138600-27138619 None:intergenic 45.0%
CTGACAGGCAAGGATAAAGA+TGG - chr2_3:27138598-27138617 Msa0286240:CDS 45.0%
GACAAGGGTCATGAAGAAAC+TGG - chr2_3:27138977-27138996 Msa0286240:intron 45.0%
CATGAAGAAACTGGTTGTGC+GGG - chr2_3:27138986-27139005 Msa0286240:intron 45.0%
ACTTGAGGTGCATCTGCAAA+TGG - chr2_3:27139276-27139295 Msa0286240:CDS 45.0%
CTGTTGTTCATGGGAAGCTA+TGG - chr2_3:27139434-27139453 Msa0286240:intron 45.0%
! TCCCACTACAGCATACCTTT+TGG + chr2_3:27139481-27139500 None:intergenic 45.0%
ACGAAGTTTGTGGCCATGAA+CGG + chr2_3:27139772-27139791 None:intergenic 45.0%
GTTTCCGTGAAAGTGACACT+TGG + chr2_3:27139964-27139983 None:intergenic 45.0%
TTCCCAACACTTATCTGCTG+AGG + chr2_3:27139986-27140005 None:intergenic 45.0%
ATCACAGAGCAAAGGAGTCT+AGG - chr2_3:27140033-27140052 Msa0286240:intron 45.0%
CCTGAACAATGGACGGTAAA+GGG + chr2_3:27140122-27140141 None:intergenic 45.0%
ACCTGAACAATGGACGGTAA+AGG + chr2_3:27140123-27140142 None:intergenic 45.0%
TACTCTGCACACTGATGACT+GGG + chr2_3:27140419-27140438 None:intergenic 45.0%
ATACTCTGCACACTGATGAC+TGG + chr2_3:27140420-27140439 None:intergenic 45.0%
GTCATCAGTGTGCAGAGTAT+TGG - chr2_3:27140420-27140439 Msa0286240:intron 45.0%
AAAGGTTTCCCTACATCTCC+AGG - chr2_3:27140449-27140468 Msa0286240:CDS 45.0%
TGACACTTCCTGGAGATGTA+GGG + chr2_3:27140460-27140479 None:intergenic 45.0%
ATGACACTTCCTGGAGATGT+AGG + chr2_3:27140461-27140480 None:intergenic 45.0%
CAGTTATCGATGACACTTCC+TGG + chr2_3:27140470-27140489 None:intergenic 45.0%
GATCAGGCTATAGGCAACAT+AGG - chr2_3:27140545-27140564 Msa0286240:intron 45.0%
! GGGATCCATCTGAAGCATGT+CGG - chr2_3:27136560-27136579 Msa0286240:intron 50.0%
ATAGGCCGACATGCTTCAGA+TGG + chr2_3:27136568-27136587 None:intergenic 50.0%
ATGCCATAAGGTTCGGCTAG+GGG + chr2_3:27136769-27136788 None:intergenic 50.0%
! GATTGTCCCTCCAGCTTGTT+GGG - chr2_3:27136795-27136814 Msa0286240:intron 50.0%
GGTTCCACCTTGCCTTCTTA+AGG - chr2_3:27136816-27136835 Msa0286240:intron 50.0%
CCTTCAATTTCCTCCTCCGA+GGG + chr2_3:27137177-27137196 None:intergenic 50.0%
ACCTTCAATTTCCTCCTCCG+AGG + chr2_3:27137178-27137197 None:intergenic 50.0%
GCAGCCAACAGATGAAGTTG+AGG - chr2_3:27137218-27137237 Msa0286240:intron 50.0%
! TATGGAGCGGACTTGGAAAC+TGG - chr2_3:27137337-27137356 Msa0286240:CDS 50.0%
CCGGATCAGTATGCACTTTC+TGG - chr2_3:27137409-27137428 Msa0286240:CDS 50.0%
AATAACTTCCCGCGACTACC+AGG - chr2_3:27137442-27137461 Msa0286240:CDS 50.0%
AGTACAGAACCTGGTAGTCG+CGG + chr2_3:27137454-27137473 None:intergenic 50.0%
CACATGCCAACATACAGCCA+TGG + chr2_3:27137514-27137533 None:intergenic 50.0%
! AAAGCAGAAGCATGGCTTCC+AGG + chr2_3:27137897-27137916 None:intergenic 50.0%
TCGAACTGTTCAGCACTCTG+GGG - chr2_3:27138160-27138179 Msa0286240:intron 50.0%
CCATGCGTTAACCAATCGAC+AGG + chr2_3:27138266-27138285 None:intergenic 50.0%
! CCTGTCGATTGGTTAACGCA+TGG - chr2_3:27138263-27138282 Msa0286240:intron 50.0%
CCTTGCCTGTCAGGAAAAAC+AGG + chr2_3:27138591-27138610 None:intergenic 50.0%
!! CCTGTTTTTCCTGACAGGCA+AGG - chr2_3:27138588-27138607 Msa0286240:CDS 50.0%
CATGCAAACCTCATTGGCCA+TGG + chr2_3:27138936-27138955 None:intergenic 50.0%
ACAAGAGGTGGATGGAGACA+AGG - chr2_3:27138961-27138980 Msa0286240:intron 50.0%
CAAGAGGTGGATGGAGACAA+GGG - chr2_3:27138962-27138981 Msa0286240:intron 50.0%
TTGGCGCACTAAGGGTTACA+AGG + chr2_3:27139069-27139088 None:intergenic 50.0%
CAAAGATATACTCGCGCTCG+TGG + chr2_3:27139353-27139372 None:intergenic 50.0%
CCCTTTACCGTCCATTGTTC+AGG - chr2_3:27140119-27140138 Msa0286240:intron 50.0%
ACTGGGATCTTGAGCTTCGA+TGG + chr2_3:27140402-27140421 None:intergenic 50.0%
CAGGCTATAGGCAACATAGG+AGG - chr2_3:27140548-27140567 Msa0286240:intron 50.0%
! CGCAATGAGCTTAGCTCTTC+GGG + chr2_3:27140623-27140642 None:intergenic 50.0%
! GCGCAATGAGCTTAGCTCTT+CGG + chr2_3:27140624-27140643 None:intergenic 50.0%
! CTGACGCACAATGTTCTGAG+TGG - chr2_3:27140657-27140676 Msa0286240:intron 50.0%
TGCCATAAGGTTCGGCTAGG+GGG + chr2_3:27136768-27136787 None:intergenic 55.0%
GGATTGTCCCTCCAGCTTGT+TGG - chr2_3:27136794-27136813 Msa0286240:intron 55.0%
GTGGAACCCAACAAGCTGGA+GGG + chr2_3:27136804-27136823 None:intergenic 55.0%
CAAGGTGGAACCCAACAAGC+TGG + chr2_3:27136808-27136827 None:intergenic 55.0%
CCCTCGGAGGAGGAAATTGA+AGG - chr2_3:27137174-27137193 Msa0286240:intron 55.0%
! GGTGTACTATGGAGCGGACT+TGG - chr2_3:27137330-27137349 Msa0286240:CDS 55.0%
GTACAGAACCTGGTAGTCGC+GGG + chr2_3:27137453-27137472 None:intergenic 55.0%
!! TTTCCGAGGGGGTACCATTC+TGG - chr2_3:27138197-27138216 Msa0286240:intron 55.0%
!! TTCCGAGGGGGTACCATTCT+GGG - chr2_3:27138198-27138217 Msa0286240:intron 55.0%
AACCCAGAATGGTACCCCCT+CGG + chr2_3:27138203-27138222 None:intergenic 55.0%
!! CTTCGGACTGGTTTCTGCCA+TGG - chr2_3:27138916-27138935 Msa0286240:intron 55.0%
GGTTTCTGCCATGGCCAATG+AGG - chr2_3:27138925-27138944 Msa0286240:intron 55.0%
AAACTGGTTGTGCGGGAACC+AGG - chr2_3:27138993-27139012 Msa0286240:intron 55.0%
AACTGGTTGTGCGGGAACCA+GGG - chr2_3:27138994-27139013 Msa0286240:intron 55.0%
GGTGGAACCCAACAAGCTGG+AGG + chr2_3:27136805-27136824 None:intergenic 60.0%
!! AGGGCTCCCTTCGGTTTTGG+TGG + chr2_3:27137158-27137177 None:intergenic 60.0%
CCAAAACCGAAGGGAGCCCT+CGG - chr2_3:27137158-27137177 Msa0286240:intron 60.0%
GTTGTGCGGGAACCAGGGAT+AGG - chr2_3:27138999-27139018 Msa0286240:intron 60.0%
CGCCCCCTAGCCGAACCTTA+TGG - chr2_3:27136763-27136782 Msa0286240:CDS 65.0%
! CCGAGGGCTCCCTTCGGTTT+TGG + chr2_3:27137161-27137180 None:intergenic 65.0%
AAACCGAAGGGAGCCCTCGG+AGG - chr2_3:27137161-27137180 Msa0286240:intron 65.0%
CCTCCTCCGAGGGCTCCCTT+CGG + chr2_3:27137167-27137186 None:intergenic 70.0%
CCGAAGGGAGCCCTCGGAGG+AGG - chr2_3:27137164-27137183 Msa0286240:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 27135657 27141096 27135657 ID=Msa0286240;Name=Msa0286240
chr2_3 mRNA 27135657 27141096 27135657 ID=Msa0286240-mRNA-1;Parent=Msa0286240;Name=Msa0286240-mRNA-1;_AED=0.08;_eAED=0.08;_QI=5|1|0.90|1|1|1|11|369|985
chr2_3 exon 27135657 27136355 27135657 ID=Msa0286240-mRNA-1:exon:9780;Parent=Msa0286240-mRNA-1
chr2_3 exon 27136613 27136810 27136613 ID=Msa0286240-mRNA-1:exon:9779;Parent=Msa0286240-mRNA-1
chr2_3 exon 27137069 27137172 27137069 ID=Msa0286240-mRNA-1:exon:9778;Parent=Msa0286240-mRNA-1
chr2_3 exon 27137269 27138148 27137269 ID=Msa0286240-mRNA-1:exon:9777;Parent=Msa0286240-mRNA-1
chr2_3 exon 27138275 27138643 27138275 ID=Msa0286240-mRNA-1:exon:9776;Parent=Msa0286240-mRNA-1
chr2_3 exon 27138770 27138931 27138770 ID=Msa0286240-mRNA-1:exon:9775;Parent=Msa0286240-mRNA-1
chr2_3 exon 27139201 27139422 27139201 ID=Msa0286240-mRNA-1:exon:9774;Parent=Msa0286240-mRNA-1
chr2_3 exon 27139514 27140026 27139514 ID=Msa0286240-mRNA-1:exon:9773;Parent=Msa0286240-mRNA-1
chr2_3 exon 27140129 27140206 27140129 ID=Msa0286240-mRNA-1:exon:9772;Parent=Msa0286240-mRNA-1
chr2_3 exon 27140441 27140512 27140441 ID=Msa0286240-mRNA-1:exon:9771;Parent=Msa0286240-mRNA-1
chr2_3 exon 27141062 27141096 27141062 ID=Msa0286240-mRNA-1:exon:9770;Parent=Msa0286240-mRNA-1
chr2_3 five_prime_UTR 27141092 27141096 27141092 ID=Msa0286240-mRNA-1:five_prime_utr;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27141062 27141091 27141062 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27140441 27140512 27140441 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27140129 27140206 27140129 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27139514 27140026 27139514 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27139201 27139422 27139201 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27138770 27138931 27138770 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27138275 27138643 27138275 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27137269 27138148 27137269 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27137069 27137172 27137069 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27136613 27136810 27136613 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 CDS 27136026 27136355 27136026 ID=Msa0286240-mRNA-1:cds;Parent=Msa0286240-mRNA-1
chr2_3 three_prime_UTR 27135657 27136025 27135657 ID=Msa0286240-mRNA-1:three_prime_utr;Parent=Msa0286240-mRNA-1
Gene Sequence

>Msa0286240

ATGAAACAAATGGAATTGGATGCCAAAGAGGATAGTCCTCTTCGGCACAAGCCTAAAAAGGACAATGCACTTGAGTCTCCTGAAAGTCTTAGAAGTAAAAAGATATCAGCTAGATGGGATCCATCTGAAGCATGTCGGCCTATAATTGATGAAGCACCTGTTTTTCATCCAACTATTGAAGAGTTTGAAGATACATTGAGTTACATAGCGAAGATACGCCCCCTAGCCGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGTTGGGTTCCACCTTGCCTTCTTAAGGAGAAAGATATTTGGGAAAATGCCGAATTTTCCACCCGTATTCAGCAAATTGATTTACTTCAAAATAGAGAACCTATGAAGAAAAAAAGTAGGGGAAGGAAGCGAAAACGTAGAAGGAACTCCAAATCAGGAACATGTAGGAGAGCTTCCAAATCAGCTTCTGAAGCTAATAATGCATCTGAAGCTGATGAGAAATACGGATTTCAAGCAGGGTCCGACTTCACGTTTAAAGACTTTCAGCAATATGCTAGCCACTTTAAGGAATGCTACTTTGGGTTGAAAGATGCAAATGAAGATGGAAAAGTTAACGATAGTAACCACCAAAACCGAAGGGAGCCCTCGGAGGAGGAAATTGAAGGTGAATATTGGCGGATAGTTGAGCAGCCAACAGATGAAGTTGAGGTGTACTATGGAGCGGACTTGGAAACTGGAGTATTTGGAAGTGGTTTTTCTAAGGCATCATCCATACCTAAGGGTTATCCGGATCAGTATGCACTTTCTGGTTGGAATCTAAATAACTTCCCGCGACTACCAGGTTCTGTACTAAGTTTTGAAGGAAGTGACATCTCAGGAGTACTAGTTCCATGGCTGTATGTTGGCATGTGCTTTTCATCGTTTTGTTGGCATGTTGAGGATCATCACCTCTATTCGCTTAATTATCTACACTTTGGTGACTCAAAGATATGGTATGGAGTACCTGGAAGCCATGCTTCTGCTTTAGAAAATGCAATGAAGAAGCACTTGCCTGATTTGTTTGAGGAAGTACCAAATCTACTCAATGATCTGGTTACTCAGTTATCTCCATCAATTCTTAAAGATGAGGGAGTGCCCGTATATCGAACTGTTCAGCACTCTGGGGAATTTGTCATTACTTTTCCGAGGGGGTACCATTCTGGGTTCAATTGTGGGTTCAACTGTGCAGAAGCAGTGAATGTAGCTCCTGTCGATTGGTTAACGCATGGCCTAAATGCCGTTGAACTTTACAGTTTACAACGCCGTAAGACATCATTGTCACATGACAAGCTTTTATTTGGATCATCGCTGGAAGCTATACGAGCCCTTGCAGAGCTAACTCTTCATGGAAAGGAAAGTTCAAAAAATTTGAAATGGAGAAGCTACTGTGGGAAAGATGGAGTTCTTACCAAGGCATTTAAGGCAAGGATAAAGATGGAAGAAGAGAGGCTAAACTGTCTTCCAACTCATTTTAAGTCGCTGAAGATGGGCAACGACTTTGACTTGCATACAGAACGAGAATGCTTTTCTTGCTTCTATGACTTATATCTATCTACTGTCGGTTGCGAGTGCTCTCCTGATAAATATTCTTGTCTTAAGCATGCTAGTTTGTTCTGCTCATGCGAAATGGACAAAAGATTTGTTCTGCTTCGATATAATATGAATGAGCTAAACAAATTGCTTGAAGCACTAGAAGGAGATTCACTTGCTCTTGAGTTATGGGAAAGTAAAAACTTCGGACTGGTTTCTGCCATGGCCAATGAGGTTTGCATGAACAAACAAGAGGTGGATGGAGACAAGGGTCATGAAGAAACTGGTTGTGCGGGAACCAGGGATAGGTCAAATAGTCATGCTACATCAGAGCTAATGCAGTGTGAATCTCACCTTGTAACCCTTAGTGCGCCAAATGAAAGTTTAGATAGTGATAACAAGGGTGATTCAGTAGAGGAAAAAGCATGTTGTTCAGAGATAAAAAAGGAACAAGACAACATGGAACTTGTTGTTGACCTATCACCTTCATCTTCTGTTGTGAAGACAGAAGTTTCATCATGCTCTAGGAATGTTCACAATTCTTGTACATTTGATGGTGGAAAACTTGAGGTGCATCTGCAAATGGATTCAGATTCAAGAAAGAAACCGAAAATTGTAGTTGAAAAAGTTATTGACACCACGAGCGCGAGTATATCTTTGACACAAGAAAGCTTTCTAATGCAAATTTTGAGTACTTCTGTCAAGCCTATAAGTTTGGGATCTGTTGTTCATGGGAAGCTATGGTGCAATAAGCATGCAATATATCCAAAAGGATTCAAGAGCCGAGTTAATTTCTTTAGCATCATCGATCCAACAAGAATCTGTAGCTATGTTTCTGAAGTAATTGATGCTGGACTTCTAGGACCTCTTTTCAAGGTTACAATGGAGGAATGTCCAAGTGTCACTTTCACGGAAACCTCAGCAGATAAGTGTTGGGAATCAGTTCTCAAGAGACTACGTGACAAAATCACAGAGCAAAGGAGTCTAGGTGAACATGAACTTCCTTCCTTAGAGCTTCTGAAAAGCATTAACGGTTTTAGAATGTTCGGCTTCCCTTTACCGTCCATTGTTCAGGCCATCGAAGCTCAAGATCCCAGTCATCAGTGTGCAGAGTATTGGAATCACAAAGGTTTCCCTACATCTCCAGGAAGTGTCATCGATAACTGTAAAGTCCTATGTTGTTCAAGTAGCCCTACCAAAGTTTTTGGTATTAATTTTACTGATCAGGCTATAGGCAACATAGGAGGAAGTTATTATTCTCTTGAAGAGATGAAATCAATACTACAAAAGGCAAGTCCCGAAGAGCTAAGCTCATTGCGCAAGTTTCTCATCTCTGACGCACAATGTTCTGAGTGGAGAATGACATTAACATCATTGATCGATGAGATTCAGAAAGCTTTGTAG
Protein sequence

>Msa0286240

MKQMELDAKEDSPLRHKPKKDNALESPESLRSKKISARWDPSEACRPIIDEAPVFHPTIEEFEDTLSYIAKIRPLAEPYGICRIVPPACWVPPCLLKEKDIWENAEFSTRIQQIDLLQNREPMKKKSRGRKRKRRRNSKSGTCRRASKSASEANNASEADEKYGFQAGSDFTFKDFQQYASHFKECYFGLKDANEDGKVNDSNHQNRREPSEEEIEGEYWRIVEQPTDEVEVYYGADLETGVFGSGFSKASSIPKGYPDQYALSGWNLNNFPRLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHFGDSKIWYGVPGSHASALENAMKKHLPDLFEEVPNLLNDLVTQLSPSILKDEGVPVYRTVQHSGEFVITFPRGYHSGFNCGFNCAEAVNVAPVDWLTHGLNAVELYSLQRRKTSLSHDKLLFGSSLEAIRALAELTLHGKESSKNLKWRSYCGKDGVLTKAFKARIKMEEERLNCLPTHFKSLKMGNDFDLHTERECFSCFYDLYLSTVGCECSPDKYSCLKHASLFCSCEMDKRFVLLRYNMNELNKLLEALEGDSLALELWESKNFGLVSAMANEVCMNKQEVDGDKGHEETGCAGTRDRSNSHATSELMQCESHLVTLSAPNESLDSDNKGDSVEEKACCSEIKKEQDNMELVVDLSPSSSVVKTEVSSCSRNVHNSCTFDGGKLEVHLQMDSDSRKKPKIVVEKVIDTTSASISLTQESFLMQILSTSVKPISLGSVVHGKLWCNKHAIYPKGFKSRVNFFSIIDPTRICSYVSEVIDAGLLGPLFKVTMEECPSVTFTETSADKCWESVLKRLRDKITEQRSLGEHELPSLELLKSINGFRMFGFPLPSIVQAIEAQDPSHQCAEYWNHKGFPTSPGSVIDNCKVLCCSSSPTKVFGINFTDQAIGNIGGSYYSLEEMKSILQKASPEELSSLRKFLISDAQCSEWRMTLTSLIDEIQKAL*