AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0291690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291690 MtrunA17_Chr2g0311661 83.226 310 33 2 1 310 1 291 0.0 533
Msa0291690 MtrunA17_Chr2g0311651 82.051 312 54 1 1 310 1 312 0.0 531
Msa0291690 MtrunA17_Chr5g0442771 54.082 294 123 7 18 306 14 300 1.55e-99 295
Msa0291690 MtrunA17_Chr5g0417001 64.740 173 53 4 16 186 6 172 1.19e-76 239
Msa0291690 MtrunA17_Chr8g0361731 48.594 249 111 7 19 260 11 249 3.87e-74 233
Msa0291690 MtrunA17_Chr6g0453131 44.803 279 112 11 12 259 6 273 1.06e-68 219
Msa0291690 MtrunA17_Chr2g0318101 46.286 175 83 4 24 194 17 184 1.29e-51 173
Msa0291690 MtrunA17_Chr4g0076731 50.888 169 66 4 18 186 50 201 2.29e-50 172
Msa0291690 MtrunA17_Chr2g0318081 51.744 172 67 4 24 195 18 173 2.92e-50 170
Msa0291690 MtrunA17_Chr8g0384721 51.765 170 69 6 24 193 9 165 4.13e-50 167
Msa0291690 MtrunA17_Chr8g0359921 53.143 175 62 6 24 195 16 173 9.61e-50 168
Msa0291690 MtrunA17_Chr3g0124761 52.353 170 67 6 24 193 9 164 1.25e-49 166
Msa0291690 MtrunA17_Chr4g0047841 45.699 186 86 4 24 197 17 199 2.73e-49 167
Msa0291690 MtrunA17_Chr7g0252971 48.521 169 74 5 24 187 10 170 2.78e-49 167
Msa0291690 MtrunA17_Chr5g0398971 47.093 172 71 5 21 189 7 161 5.37e-48 164
Msa0291690 MtrunA17_Chr5g0417791 49.693 163 70 5 24 186 5 155 7.67e-48 161
Msa0291690 MtrunA17_Chr4g0018391 46.199 171 72 4 21 189 7 159 9.76e-48 163
Msa0291690 MtrunA17_Chr7g0263931 40.580 207 106 5 24 230 13 202 1.75e-47 162
Msa0291690 MtrunA17_Chr8g0346001 45.402 174 86 4 15 186 9 175 5.83e-47 163
Msa0291690 MtrunA17_Chr4g0056541 45.304 181 79 5 21 199 7 169 8.65e-47 161
Msa0291690 MtrunA17_Chr3g0130731 48.837 172 73 7 15 186 1 157 1.10e-46 159
Msa0291690 MtrunA17_Chr4g0042561 49.693 163 70 5 24 186 11 161 2.09e-46 157
Msa0291690 MtrunA17_Chr2g0326361 47.500 160 74 4 24 183 16 165 2.45e-46 159
Msa0291690 MtrunA17_Chr2g0309891 33.798 287 164 6 24 309 8 269 2.53e-46 159
Msa0291690 MtrunA17_Chr7g0253011 46.821 173 81 4 20 192 16 177 6.58e-46 159
Msa0291690 MtrunA17_Chr3g0091921 45.198 177 83 3 16 192 10 172 3.85e-45 155
Msa0291690 MtrunA17_Chr4g0060931 44.505 182 85 5 20 200 16 182 5.83e-45 156
Msa0291690 MtrunA17_Chr6g0461661 45.856 181 83 4 10 187 3 171 2.02e-44 155
Msa0291690 MtrunA17_Chr2g0309331 41.081 185 90 5 17 199 6 173 9.26e-44 152
Msa0291690 MtrunA17_Chr5g0405211 42.373 177 83 3 15 189 1 160 1.27e-43 152
Msa0291690 MtrunA17_Chr6g0481091 45.455 165 74 3 24 187 8 157 1.28e-43 149
Msa0291690 MtrunA17_Chr8g0372121 45.029 171 74 4 21 189 6 158 1.45e-43 151
Msa0291690 MtrunA17_Chr7g0214071 44.944 178 78 5 16 193 10 167 1.78e-43 149
Msa0291690 MtrunA17_Chr3g0109821 45.402 174 80 3 24 196 8 167 4.38e-43 156
Msa0291690 MtrunA17_Chr6g0453451 45.000 180 82 6 15 192 12 176 5.32e-43 150
Msa0291690 MtrunA17_Chr6g0484441 39.378 193 95 6 18 210 2 172 2.86e-42 148
Msa0291690 MtrunA17_Chr5g0433781 46.386 166 73 4 24 188 8 158 4.62e-42 153
Msa0291690 MtrunA17_Chr3g0139331 44.068 177 83 4 17 193 6 166 8.40e-42 147
Msa0291690 MtrunA17_Chr1g0200561 41.667 180 85 4 9 186 7 168 2.15e-41 147
Msa0291690 MtrunA17_Chr2g0316971 45.294 170 80 5 18 187 20 176 3.11e-41 147
Msa0291690 MtrunA17_Chr8g0385991 44.068 177 87 5 13 189 6 170 3.66e-41 142
Msa0291690 MtrunA17_Chr7g0217721 41.361 191 102 4 25 210 22 207 4.31e-41 146
Msa0291690 MtrunA17_Chr2g0312321 37.872 235 118 7 24 258 13 219 5.61e-41 144
Msa0291690 MtrunA17_Chr1g0147421 43.275 171 80 5 24 193 29 183 9.25e-40 142
Msa0291690 MtrunA17_Chr4g0038751 42.197 173 82 3 19 191 12 166 1.18e-39 140
Msa0291690 MtrunA17_Chr5g0400461 41.714 175 83 4 17 187 2 161 2.27e-39 141
Msa0291690 MtrunA17_Chr1g0197361 43.605 172 79 4 24 193 10 165 6.39e-39 144
Msa0291690 MtrunA17_Chr4g0017921 43.452 168 74 5 21 186 8 156 7.93e-39 140
Msa0291690 MtrunA17_Chr4g0054791 41.765 170 86 4 24 192 8 165 1.94e-38 138
Msa0291690 MtrunA17_Chr3g0131911 41.808 177 94 3 13 189 6 173 4.99e-38 135
Msa0291690 MtrunA17_Chr1g0197351 44.242 165 82 3 24 187 44 199 8.64e-38 140
Msa0291690 MtrunA17_Chr3g0092671 43.860 171 78 4 24 192 7 161 2.54e-37 139
Msa0291690 MtrunA17_Chr1g0201021 48.855 131 62 2 23 152 20 146 2.69e-37 139
Msa0291690 MtrunA17_Chr1g0183741 33.636 220 123 4 24 243 12 208 6.93e-37 133
Msa0291690 MtrunA17_Chr7g0217711 47.101 138 68 2 25 162 22 154 1.65e-36 129
Msa0291690 MtrunA17_Chr5g0428991 41.477 176 86 5 12 186 16 175 2.14e-36 137
Msa0291690 MtrunA17_Chr3g0130101 41.818 165 80 4 23 186 8 157 2.82e-36 133
Msa0291690 MtrunA17_Chr3g0128151 40.331 181 91 5 8 187 9 173 6.00e-36 136
Msa0291690 MtrunA17_Chr3g0144271 47.482 139 69 3 24 161 25 160 8.38e-36 133
Msa0291690 MtrunA17_Chr8g0364791 40.606 165 82 3 23 186 7 156 1.11e-35 133
Msa0291690 MtrunA17_Chr8g0384201 39.394 165 84 3 23 186 7 156 1.04e-34 131
Msa0291690 MtrunA17_Chr7g0261411 40.994 161 77 3 24 184 12 154 2.64e-34 126
Msa0291690 MtrunA17_Chr3g0128111 40.244 164 82 3 25 187 45 193 3.45e-34 125
Msa0291690 MtrunA17_Chr8g0345671 46.617 133 65 5 20 150 10 138 6.08e-32 122
Msa0291690 MtrunA17_Chr4g0026141 41.520 171 83 7 19 184 2 160 3.73e-30 115
Msa0291690 MtrunA17_Chr8g0345691 39.286 168 80 6 19 184 10 157 1.22e-29 116
Msa0291690 MtrunA17_Chr8g0345711 38.462 169 96 7 19 184 10 173 6.40e-28 106
Msa0291690 MtrunA17_Chr2g0321631 37.952 166 87 5 24 184 6 160 1.63e-27 107
Msa0291690 MtrunA17_Chr7g0266701 34.270 178 102 6 19 191 2 169 2.54e-27 107
Msa0291690 MtrunA17_Chr3g0113001 31.579 228 130 5 75 288 17 232 7.64e-26 104
Msa0291690 MtrunA17_Chr4g0050701 32.317 164 95 4 24 187 13 160 7.32e-25 99.0
Msa0291690 MtrunA17_Chr2g0321741 40.367 109 61 1 42 150 12 116 7.61e-25 102
Msa0291690 MtrunA17_Chr8g0345731 34.194 155 95 5 19 169 22 173 3.56e-23 94.0
Msa0291690 MtrunA17_Chr8g0345721 36.306 157 66 4 25 150 38 191 6.13e-23 94.4
Msa0291690 MtrunA17_Chr8g0345741 40.000 120 67 4 33 150 2 118 1.98e-20 86.3
Msa0291690 MtrunA17_Chr3g0113031 39.200 125 64 4 87 210 4 117 9.92e-20 87.0
Msa0291690 MtrunA17_Chr8g0384351 27.835 194 94 8 24 217 12 159 5.67e-19 82.8
Msa0291690 MtrunA17_Chr7g0251651 36.429 140 73 6 17 150 12 141 7.03e-19 82.8
Msa0291690 MtrunA17_Chr7g0243371 50.000 80 38 1 76 155 17 94 7.22e-19 80.9
Msa0291690 MtrunA17_Chr8g0345701 37.838 148 70 8 25 155 10 152 2.70e-18 80.9
Msa0291690 MtrunA17_Chr7g0251671 33.094 139 83 6 14 150 3 133 1.18e-17 79.0
Msa0291690 MtrunA17_Chr7g0251661 34.058 138 83 5 14 150 3 133 1.74e-17 78.2
Msa0291690 MtrunA17_Chr3g0130321 29.940 167 97 6 24 185 9 160 1.10e-16 77.4
Msa0291690 MtrunA17_Chr1g0194791 65.957 47 15 1 24 69 48 94 1.61e-15 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291690 AT2G43000.1 69.540 174 38 3 18 191 14 172 2.17e-83 253
Msa0291690 AT3G12910.1 48.675 302 134 10 10 304 9 296 1.25e-82 252
Msa0291690 AT5G39820.1 57.949 195 65 5 15 196 13 203 2.11e-72 227
Msa0291690 AT1G26870.1 61.143 175 58 5 16 186 7 175 8.17e-70 223
Msa0291690 AT1G61110.1 46.193 197 91 6 8 200 3 188 4.29e-53 177
Msa0291690 AT3G04070.1 48.588 177 77 4 24 187 12 187 1.07e-52 177
Msa0291690 AT3G04070.2 50.909 165 75 4 24 187 12 171 1.30e-52 176
Msa0291690 AT2G02450.1 52.439 164 61 4 23 186 52 198 2.25e-51 174
Msa0291690 AT2G02450.2 52.439 164 61 4 23 186 52 198 2.41e-51 175
Msa0291690 AT3G15510.1 48.235 170 77 4 26 191 21 183 3.69e-50 170
Msa0291690 AT5G63790.1 46.277 188 85 7 25 210 53 226 5.36e-50 168
Msa0291690 AT1G69490.1 51.534 163 67 4 24 186 11 161 6.04e-50 167
Msa0291690 AT5G63790.2 46.277 188 85 7 25 210 63 236 6.58e-50 168
Msa0291690 AT5G08790.1 41.818 220 104 9 25 239 10 210 9.12e-50 167
Msa0291690 AT1G01720.1 50.867 173 71 5 24 195 9 168 1.40e-49 167
Msa0291690 AT1G52890.1 48.370 184 74 5 24 205 16 180 3.16e-48 164
Msa0291690 AT3G15500.1 50.000 172 66 4 24 193 16 169 7.81e-48 163
Msa0291690 AT1G71930.2 34.694 294 160 6 24 308 11 281 9.72e-48 163
Msa0291690 AT1G71930.1 34.694 294 160 6 24 308 11 281 9.72e-48 163
Msa0291690 AT2G46770.1 44.886 176 88 4 15 186 10 180 1.04e-47 164
Msa0291690 AT4G27410.2 50.000 172 69 5 24 194 16 171 1.27e-47 162
Msa0291690 AT5G61430.1 47.727 176 76 5 20 195 15 174 3.30e-47 162
Msa0291690 AT1G77450.1 41.880 234 96 12 24 235 12 227 1.24e-46 158
Msa0291690 AT1G12260.2 46.199 171 72 4 21 189 7 159 2.99e-46 159
Msa0291690 AT5G07680.1 46.961 181 78 6 16 195 12 175 3.17e-46 159
Msa0291690 AT1G12260.1 46.199 171 72 4 21 189 7 159 4.10e-46 160
Msa0291690 AT5G07680.2 47.126 174 75 5 20 192 2 159 4.38e-46 158
Msa0291690 AT1G52880.1 52.439 164 74 3 26 189 21 180 4.96e-46 158
Msa0291690 AT3G04060.1 49.180 183 76 8 20 201 19 185 7.67e-46 158
Msa0291690 AT5G62380.2 45.238 168 73 4 24 189 9 159 1.47e-45 158
Msa0291690 AT5G62380.1 45.238 168 73 4 24 189 9 159 1.47e-45 158
Msa0291690 AT2G43000.2 71.028 107 17 2 85 191 2 94 2.04e-45 153
Msa0291690 AT5G18270.1 49.112 169 70 6 20 187 20 173 2.52e-45 157
Msa0291690 AT4G36160.2 45.402 174 75 4 15 186 8 163 3.32e-45 158
Msa0291690 AT4G36160.1 45.402 174 75 4 15 186 4 159 3.42e-45 157
Msa0291690 AT4G36160.3 45.402 174 75 4 15 186 4 159 3.42e-45 157
Msa0291690 AT2G17040.1 33.333 288 155 9 20 300 4 261 4.97e-45 154
Msa0291690 AT5G13180.1 49.068 161 64 3 24 184 16 158 8.43e-45 153
Msa0291690 AT5G18270.2 48.521 169 71 6 20 187 20 173 8.72e-45 155
Msa0291690 AT3G61910.1 44.068 177 90 4 15 187 5 176 1.17e-44 155
Msa0291690 AT1G65910.1 44.444 189 86 5 24 210 8 179 1.96e-44 160
Msa0291690 AT4G27410.3 46.277 188 69 6 24 194 16 188 2.09e-44 154
Msa0291690 AT5G39610.1 46.243 173 78 4 20 192 19 176 2.28e-44 153
Msa0291690 AT1G62700.1 45.029 171 74 4 21 189 7 159 2.46e-44 155
Msa0291690 AT1G62700.2 45.029 171 74 4 21 189 7 159 2.46e-44 155
Msa0291690 AT2G18060.3 44.444 171 75 4 21 189 9 161 4.58e-44 154
Msa0291690 AT2G18060.1 44.444 171 75 4 21 189 9 161 4.58e-44 154
Msa0291690 AT3G18400.1 44.571 175 79 5 18 192 2 158 4.63e-44 153
Msa0291690 AT2G33480.1 47.590 166 68 4 24 189 17 163 1.14e-43 150
Msa0291690 AT3G17730.1 45.455 165 74 3 24 187 8 157 1.42e-43 150
Msa0291690 AT2G33480.2 47.590 166 66 4 24 189 17 161 1.97e-43 150
Msa0291690 AT2G24430.2 43.258 178 84 5 18 194 12 173 2.49e-43 151
Msa0291690 AT2G24430.1 43.258 178 84 5 18 194 12 173 2.49e-43 151
Msa0291690 AT3G12977.1 38.298 235 109 8 24 256 20 220 6.01e-43 149
Msa0291690 AT3G29035.1 51.333 150 65 4 20 168 23 165 2.77e-42 148
Msa0291690 AT1G76420.1 45.122 164 73 4 24 186 24 171 4.23e-42 148
Msa0291690 AT3G03200.1 44.706 170 79 4 24 192 8 163 4.58e-42 151
Msa0291690 AT5G17260.1 43.529 170 81 4 24 192 8 163 5.72e-42 151
Msa0291690 AT5G66300.1 43.452 168 77 4 24 189 14 165 5.77e-42 147
Msa0291690 AT3G10500.1 45.882 170 76 4 24 192 11 165 9.64e-42 152
Msa0291690 AT1G54330.1 44.318 176 75 4 24 198 8 161 1.16e-41 146
Msa0291690 AT1G79580.3 42.442 172 79 5 17 186 13 166 3.21e-41 147
Msa0291690 AT1G79580.5 42.442 172 79 5 17 186 13 166 3.21e-41 147
Msa0291690 AT1G79580.4 42.442 172 79 5 17 186 13 166 3.21e-41 147
Msa0291690 AT1G79580.2 42.442 172 79 5 17 186 13 166 3.21e-41 147
Msa0291690 AT1G79580.1 42.442 172 79 5 17 186 13 166 3.21e-41 147
Msa0291690 AT1G32770.1 41.304 184 90 6 15 191 10 182 1.65e-40 145
Msa0291690 AT3G15170.1 44.318 176 85 6 18 192 16 179 1.94e-40 143
Msa0291690 AT1G32510.1 42.262 168 83 3 24 187 8 165 3.31e-40 142
Msa0291690 AT5G46590.2 49.231 130 62 2 24 152 8 134 4.47e-40 142
Msa0291690 AT5G04410.1 44.848 165 75 3 24 187 11 160 6.97e-40 147
Msa0291690 AT5G46590.1 49.231 130 62 2 24 152 8 134 7.55e-40 141
Msa0291690 AT3G10480.1 43.636 165 78 4 24 187 29 179 9.01e-40 145
Msa0291690 AT1G56010.2 38.627 233 121 8 24 253 21 234 1.11e-39 142
Msa0291690 AT4G10350.1 42.690 171 79 5 21 188 9 163 1.12e-39 142
Msa0291690 AT3G10480.2 43.636 165 77 4 24 187 29 178 2.05e-39 144
Msa0291690 AT4G17980.1 43.023 172 85 5 17 187 2 161 2.44e-39 139
Msa0291690 AT4G17980.2 43.636 165 81 4 24 187 8 161 4.23e-39 139
Msa0291690 AT5G53950.1 43.023 172 86 4 17 188 12 171 9.10e-39 140
Msa0291690 AT2G27300.1 46.094 128 65 1 23 150 15 138 4.41e-38 138
Msa0291690 AT1G33280.1 41.818 165 76 3 24 186 10 156 4.88e-38 137
Msa0291690 AT5G09330.5 40.000 165 83 3 24 187 8 157 8.44e-38 140
Msa0291690 AT5G09330.2 40.000 165 83 3 24 187 8 157 8.44e-38 140
Msa0291690 AT5G09330.4 40.000 165 83 3 24 187 8 157 8.44e-38 140
Msa0291690 AT5G09330.3 40.000 165 83 3 24 187 8 157 8.44e-38 140
Msa0291690 AT5G09330.1 40.000 165 83 3 24 187 8 157 8.44e-38 140
Msa0291690 AT3G10490.1 40.936 171 74 4 24 187 29 179 1.11e-37 134
Msa0291690 AT1G34190.1 42.424 165 79 4 24 187 18 167 5.39e-37 139
Msa0291690 AT3G44290.2 42.188 128 70 1 23 150 15 138 5.62e-37 132
Msa0291690 AT3G10490.2 40.936 171 74 4 24 187 29 179 6.46e-37 137
Msa0291690 AT5G22290.1 42.969 128 69 1 23 150 22 145 1.22e-36 134
Msa0291690 AT4G35580.1 50.746 134 60 3 19 151 7 135 1.74e-36 137
Msa0291690 AT4G35580.2 50.746 134 60 3 19 151 7 135 1.90e-36 137
Msa0291690 AT4G35580.3 50.746 134 60 3 19 151 7 135 1.92e-36 137
Msa0291690 AT3G44290.1 42.188 128 70 1 23 150 15 138 2.96e-36 133
Msa0291690 AT1G34180.3 49.231 130 61 2 24 152 18 143 3.04e-36 135
Msa0291690 AT5G64060.1 38.596 171 89 3 24 193 8 163 7.21e-36 132
Msa0291690 AT1G34180.1 49.231 130 61 2 24 152 18 143 1.19e-35 135
Msa0291690 AT1G33060.2 48.485 132 62 3 21 151 24 150 1.28e-35 136
Msa0291690 AT1G33060.1 48.485 132 62 3 21 151 24 150 1.30e-35 136
Msa0291690 AT3G10480.3 37.879 198 75 5 24 187 29 212 2.37e-34 131
Msa0291690 AT1G34180.4 45.070 142 61 2 24 152 18 155 2.42e-34 130
Msa0291690 AT1G34180.2 45.070 142 61 2 24 152 18 155 7.02e-34 130
Msa0291690 AT3G49530.2 39.645 169 86 5 19 186 11 164 1.56e-33 127
Msa0291690 AT5G24590.2 41.667 168 80 5 23 187 13 165 2.30e-33 127
Msa0291690 AT3G49530.1 39.645 169 86 5 19 186 11 164 5.01e-33 127
Msa0291690 AT5G04395.1 40.278 144 73 2 24 155 30 172 3.87e-31 115
Msa0291690 AT4G28530.1 40.884 181 69 6 24 186 12 172 5.69e-31 119
Msa0291690 AT5G64530.1 34.659 176 89 6 24 192 5 161 2.91e-29 110
Msa0291690 AT5G61430.2 47.934 121 49 3 75 195 5 111 2.93e-29 113
Msa0291690 AT5G22380.1 30.870 230 131 7 19 235 3 217 1.13e-28 110
Msa0291690 AT3G12977.2 38.624 189 79 9 70 256 14 167 1.94e-28 109
Msa0291690 AT5G64530.2 40.769 130 62 4 24 153 5 119 3.60e-27 104
Msa0291690 AT1G32870.2 46.923 130 62 3 24 152 12 135 7.72e-27 110
Msa0291690 AT3G44350.2 31.579 247 136 10 25 263 8 229 8.42e-27 105
Msa0291690 AT1G32870.1 46.923 130 62 3 24 152 12 135 9.22e-27 110
Msa0291690 AT1G32870.3 46.923 130 62 3 24 152 48 171 1.29e-26 110
Msa0291690 AT3G44350.1 42.537 134 64 5 25 151 8 135 3.40e-26 102
Msa0291690 AT4G01550.1 40.909 132 75 3 23 152 5 135 5.70e-24 101
Msa0291690 AT1G56010.1 35.676 185 99 6 70 253 2 167 6.81e-24 98.6
Msa0291690 AT4G01540.4 42.105 133 73 4 23 152 5 136 1.45e-23 99.8
Msa0291690 AT4G01540.2 42.105 133 73 4 23 152 5 136 2.15e-23 99.8
Msa0291690 AT4G01540.3 42.105 133 73 4 23 152 5 136 2.26e-23 99.8
Msa0291690 AT4G01540.1 42.105 133 73 4 23 152 5 136 2.64e-23 100
Msa0291690 AT4G01520.1 40.458 131 74 4 25 152 7 136 3.28e-23 97.4
Msa0291690 AT2G33480.3 44.348 115 49 3 75 189 7 106 7.64e-23 94.4
Msa0291690 AT4G10350.2 42.105 114 50 3 76 188 18 116 1.60e-20 90.1
Msa0291690 AT3G04420.2 38.760 129 72 4 25 150 6 130 3.98e-20 89.0
Msa0291690 AT1G02230.1 39.850 133 73 5 25 154 6 134 6.99e-20 89.4
Msa0291690 AT1G02250.1 40.310 129 70 5 25 150 6 130 8.16e-20 89.0
Msa0291690 AT3G04420.1 38.760 129 72 4 25 150 6 130 1.08e-19 88.6
Msa0291690 AT5G14000.2 31.250 160 100 4 9 166 3 154 1.39e-19 84.3
Msa0291690 AT5G14000.1 31.288 163 102 4 9 169 3 157 6.65e-19 83.6
Msa0291690 AT4G28530.2 42.991 107 42 3 24 113 12 116 3.83e-17 80.9
Msa0291690 AT5G50820.1 35.556 135 72 5 24 155 19 141 6.25e-17 77.8
Msa0291690 AT1G02220.1 37.209 129 71 5 25 150 6 127 9.67e-16 77.4
Msa0291690 AT2G18060.2 39.326 89 37 2 101 189 2 73 5.52e-15 74.3
Msa0291690 AT1G01010.1 36.567 134 74 6 25 150 6 136 6.48e-14 72.4
Msa0291690 AT3G55210.1 31.034 174 88 7 24 184 13 167 2.10e-13 69.7
Msa0291690 AT3G56530.1 29.448 163 96 4 24 184 54 199 3.14e-13 69.7
Msa0291690 AT3G10490.4 35.714 98 37 3 96 187 2 79 2.14e-11 64.3
Msa0291690 AT3G10490.3 35.714 98 37 3 96 187 2 79 2.14e-11 64.3

Find 55 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTTGCTATCATTTGATAAT+TGG 0.128829 2_3:-40347405 Msa0291690:CDS
TCTATGGCATGCAGGAAATT+TGG 0.174862 2_3:-40347753 Msa0291690:intron
TCTCCTCCATTTGAGTATAT+TGG 0.237105 2_3:+40348414 None:intergenic
GAGTCACTGGCTCTGGATTC+TGG 0.244802 2_3:-40348458 Msa0291690:CDS
CTCCATATTGTTGCCCATTC+TGG 0.282089 2_3:+40347630 None:intergenic
AGCATAGGAAATGTTTGTTT+TGG 0.292918 2_3:+40348275 None:intergenic
GATGATGATGTTCCACTTCC+TGG 0.327314 2_3:-40349424 Msa0291690:CDS
CCAGAGCCAGTGACTCTATT+TGG 0.333205 2_3:+40348465 None:intergenic
TTAGCTAATTGTTTCATCTC+TGG 0.354898 2_3:+40347682 None:intergenic
ATGCATCATCCAATCAGTTT+TGG 0.361511 2_3:+40348326 None:intergenic
CAACAAACATACATCAATTT+CGG 0.362137 2_3:-40347595 Msa0291690:CDS
CACCAGAATGGGCAACAATA+TGG 0.367590 2_3:-40347632 Msa0291690:CDS
TTGATGAGATCAATAGCAAT+AGG 0.399965 2_3:+40349334 None:intergenic
GTTGCTATCATTTGATAATT+GGG 0.410195 2_3:-40347404 Msa0291690:CDS
CGTTAATGTGATGATGTTCA+TGG 0.410482 2_3:+40347566 None:intergenic
GCCAAAGAGGAAGAAAATAT+AGG 0.410785 2_3:-40348500 Msa0291690:CDS
CCAAATAGAGTCACTGGCTC+TGG 0.412912 2_3:-40348465 Msa0291690:CDS
ATATCTACAAATATGATCCT+TGG 0.441210 2_3:-40349303 Msa0291690:CDS
TGTAACACGGGCACCAGAAT+GGG 0.447569 2_3:-40347643 Msa0291690:CDS
ATCAAATTCTTCGATTAAGC+AGG 0.451212 2_3:-40347437 Msa0291690:CDS
GTTTATTACCGTGGTAGTGC+TGG 0.452034 2_3:-40348357 Msa0291690:CDS
TCTGGATTCTGGAAAGCAAC+TGG 0.467422 2_3:-40348447 Msa0291690:CDS
TTTGATAATTGGGATGAGCT+TGG 0.467447 2_3:-40347394 Msa0291690:CDS
GATAAACCAATATACTCAAA+TGG 0.472311 2_3:-40348420 Msa0291690:CDS
TTGTAACACGGGCACCAGAA+TGG 0.477618 2_3:-40347644 Msa0291690:CDS
TATCTACAAATATGATCCTT+GGG 0.485955 2_3:-40349302 Msa0291690:CDS
GATAATGAATATGTTGTAGA+TGG 0.489983 2_3:-40349448 Msa0291690:CDS
GAAAAGGTACCAAAACTGAT+TGG 0.493324 2_3:-40348335 Msa0291690:CDS
TCTGGTGCCCGTGTTACAAA+CGG 0.495885 2_3:+40347648 None:intergenic
AATTATATCAATTACAAACT+AGG 0.502539 2_3:+40347343 None:intergenic
TTGCTTGTATAATTATTGAC+TGG 0.508672 2_3:+40347535 None:intergenic
AAATGTAGCTGGAGCAGAGA+AGG 0.513323 2_3:-40348538 Msa0291690:CDS
CAAGCAATGATCAAAGGAAT+CGG 0.513538 2_3:-40347519 Msa0291690:CDS
TACCGTGGTAGTGCTGGAAA+AGG 0.513961 2_3:-40348351 Msa0291690:CDS
TATGCAGAAGCAAATGTAGC+TGG 0.529620 2_3:-40348549 Msa0291690:intron
TGGAAACGAAATCCAGGAAG+TGG 0.529636 2_3:+40349412 None:intergenic
GTAACAAGTTCTTCATCTGT+AGG 0.530457 2_3:+40349388 None:intergenic
CAAGTTCTTCATCTGTAGGA+TGG 0.540071 2_3:+40349392 None:intergenic
ATATACTCAAATGGAGGAGA+AGG 0.541852 2_3:-40348411 Msa0291690:CDS
GTTAGACCAAATAGAGTCAC+TGG 0.561770 2_3:-40348471 Msa0291690:CDS
GTAGGATGGAAACGAAATCC+AGG 0.566609 2_3:+40349406 None:intergenic
CGTCAAGCCGTTTGTAACAC+GGG 0.568186 2_3:-40347655 Msa0291690:CDS
ATCAACATCATTCTTAGCAT+AGG 0.578970 2_3:+40348260 None:intergenic
ATTATACAAGCAATGATCAA+AGG 0.581251 2_3:-40347525 Msa0291690:CDS
GGAGAAGGAAATGATTGTGT+TGG 0.583944 2_3:-40348396 Msa0291690:CDS
ACGTCAAGCCGTTTGTAACA+CGG 0.586656 2_3:-40347656 Msa0291690:CDS
CATATACTTGGAAGATCCCA+AGG 0.592043 2_3:+40349286 None:intergenic
TTAATCGAAGAATTTGATGA+TGG 0.595206 2_3:+40347442 None:intergenic
AAAACACTTGTTTATTACCG+TGG 0.603507 2_3:-40348366 Msa0291690:CDS
ATGAGCTTGGATCAGTTGTG+AGG 0.626748 2_3:-40347381 Msa0291690:CDS
TCAAAAGAAATGTATCACAA+AGG 0.638749 2_3:-40347714 Msa0291690:CDS
AAACCAATATACTCAAATGG+AGG 0.641619 2_3:-40348417 Msa0291690:CDS
AGATCAGTTGAGCTCTAGAG+TGG 0.646085 2_3:-40347488 Msa0291690:CDS
TATGAACGATGATTTCAACA+CGG 0.741102 2_3:-40349470 Msa0291690:CDS
TGAACATCATCACATTAACG+AGG 0.762973 2_3:-40347563 Msa0291690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAATAATTATGGATTAAA+GGG + chr2_3:40348765-40348784 None:intergenic 10.0%
!!! ATAAAATAATTATGGATTAA+AGG + chr2_3:40348766-40348785 None:intergenic 10.0%
!!! ATTATTTTATTATTTTCTCT+TGG - chr2_3:40348776-40348795 Msa0291690:intron 10.0%
!! TTTAAAAAATGTTAATAGAA+AGG - chr2_3:40348840-40348859 Msa0291690:intron 10.0%
!!! TAAAATAATTATGGATTAAA+GGG + chr2_3:40348765-40348784 None:intergenic 10.0%
!!! ATAAAATAATTATGGATTAA+AGG + chr2_3:40348766-40348785 None:intergenic 10.0%
!!! ATTATTTTATTATTTTCTCT+TGG - chr2_3:40348776-40348795 Msa0291690:intron 10.0%
!! TTTAAAAAATGTTAATAGAA+AGG - chr2_3:40348840-40348859 Msa0291690:intron 10.0%
!! CAATACTTAGATTTATAAAA+AGG + chr2_3:40347914-40347933 None:intergenic 15.0%
!!! TAGCTATGAAAATTTTAAAA+TGG - chr2_3:40347961-40347980 Msa0291690:intron 15.0%
!! ATAATGAAAAGGAAAAATAA+AGG + chr2_3:40348227-40348246 None:intergenic 15.0%
!! TATAGTTATCTATAATGAAA+AGG + chr2_3:40348238-40348257 None:intergenic 15.0%
!! ATATTCAAACAATAAAAGAT+TGG + chr2_3:40348632-40348651 None:intergenic 15.0%
!! CAATACTTAGATTTATAAAA+AGG + chr2_3:40347914-40347933 None:intergenic 15.0%
!!! TAGCTATGAAAATTTTAAAA+TGG - chr2_3:40347961-40347980 Msa0291690:intron 15.0%
!! ATAATGAAAAGGAAAAATAA+AGG + chr2_3:40348227-40348246 None:intergenic 15.0%
!! TATAGTTATCTATAATGAAA+AGG + chr2_3:40348238-40348257 None:intergenic 15.0%
!! ATATTCAAACAATAAAAGAT+TGG + chr2_3:40348632-40348651 None:intergenic 15.0%
!!! AATATTTTTCAGTGTAATTG+AGG + chr2_3:40348155-40348174 None:intergenic 20.0%
!! ATATATAGAGAGAATTAAGT+GGG + chr2_3:40348182-40348201 None:intergenic 20.0%
!! TATATATAGAGAGAATTAAG+TGG + chr2_3:40348183-40348202 None:intergenic 20.0%
!!! GTTTGAATATATGTTGATTT+TGG - chr2_3:40348642-40348661 Msa0291690:intron 20.0%
!!! AGATACAAAATTTTACAAGT+TGG + chr2_3:40348898-40348917 None:intergenic 20.0%
!! TATTACTAATAGGATTACAA+GGG - chr2_3:40348965-40348984 Msa0291690:intron 20.0%
!!! AATATTTTTCAGTGTAATTG+AGG + chr2_3:40348155-40348174 None:intergenic 20.0%
!! ATATATAGAGAGAATTAAGT+GGG + chr2_3:40348182-40348201 None:intergenic 20.0%
!! TATATATAGAGAGAATTAAG+TGG + chr2_3:40348183-40348202 None:intergenic 20.0%
!!! GTTTGAATATATGTTGATTT+TGG - chr2_3:40348642-40348661 Msa0291690:intron 20.0%
!!! AGATACAAAATTTTACAAGT+TGG + chr2_3:40348898-40348917 None:intergenic 20.0%
!! TATTACTAATAGGATTACAA+GGG - chr2_3:40348965-40348984 Msa0291690:intron 20.0%
! GATAATGAATATGTTGTAGA+TGG - chr2_3:40347381-40347400 Msa0291690:CDS 25.0%
! ATATCTACAAATATGATCCT+TGG - chr2_3:40347526-40347545 Msa0291690:CDS 25.0%
! TATCTACAAATATGATCCTT+GGG - chr2_3:40347527-40347546 Msa0291690:CDS 25.0%
! TCTAAATGACACAAACTATA+AGG - chr2_3:40347703-40347722 Msa0291690:CDS 25.0%
! ACACAAACTATAAGGAAAAA+TGG - chr2_3:40347711-40347730 Msa0291690:CDS 25.0%
! CTTGAATGTAGTTATAACTA+AGG + chr2_3:40347802-40347821 None:intergenic 25.0%
! CTTAGTTATAACTACATTCA+AGG - chr2_3:40347800-40347819 Msa0291690:intron 25.0%
!! TTTTGTCTTAATCATCTTTC+TGG - chr2_3:40347829-40347848 Msa0291690:intron 25.0%
! TGATCATGATTATCAAGAAT+TGG - chr2_3:40347885-40347904 Msa0291690:intron 25.0%
! GATAAACCAATATACTCAAA+TGG - chr2_3:40348409-40348428 Msa0291690:CDS 25.0%
! TGGATTAATTATTGTGATGA+TGG + chr2_3:40348878-40348897 None:intergenic 25.0%
!!! TAAGCAAGAGTATTACTAAT+AGG - chr2_3:40348955-40348974 Msa0291690:intron 25.0%
! GTATTACTAATAGGATTACA+AGG - chr2_3:40348964-40348983 Msa0291690:intron 25.0%
! TCAAAAGAAATGTATCACAA+AGG - chr2_3:40349115-40349134 Msa0291690:intron 25.0%
! CAACAAACATACATCAATTT+CGG - chr2_3:40349234-40349253 Msa0291690:intron 25.0%
! TTGCTTGTATAATTATTGAC+TGG + chr2_3:40349297-40349316 None:intergenic 25.0%
! ATTATACAAGCAATGATCAA+AGG - chr2_3:40349304-40349323 Msa0291690:CDS 25.0%
! TTAATCGAAGAATTTGATGA+TGG + chr2_3:40349390-40349409 None:intergenic 25.0%
!! AGTTGCTATCATTTGATAAT+TGG - chr2_3:40349424-40349443 Msa0291690:CDS 25.0%
!! GTTGCTATCATTTGATAATT+GGG - chr2_3:40349425-40349444 Msa0291690:CDS 25.0%
! GATAATGAATATGTTGTAGA+TGG - chr2_3:40347381-40347400 Msa0291690:CDS 25.0%
! ATATCTACAAATATGATCCT+TGG - chr2_3:40347526-40347545 Msa0291690:CDS 25.0%
! TATCTACAAATATGATCCTT+GGG - chr2_3:40347527-40347546 Msa0291690:CDS 25.0%
! TCTAAATGACACAAACTATA+AGG - chr2_3:40347703-40347722 Msa0291690:CDS 25.0%
! ACACAAACTATAAGGAAAAA+TGG - chr2_3:40347711-40347730 Msa0291690:CDS 25.0%
! CTTGAATGTAGTTATAACTA+AGG + chr2_3:40347802-40347821 None:intergenic 25.0%
! CTTAGTTATAACTACATTCA+AGG - chr2_3:40347800-40347819 Msa0291690:intron 25.0%
!! TTTTGTCTTAATCATCTTTC+TGG - chr2_3:40347829-40347848 Msa0291690:intron 25.0%
! TGATCATGATTATCAAGAAT+TGG - chr2_3:40347885-40347904 Msa0291690:intron 25.0%
! GATAAACCAATATACTCAAA+TGG - chr2_3:40348409-40348428 Msa0291690:CDS 25.0%
! TGGATTAATTATTGTGATGA+TGG + chr2_3:40348878-40348897 None:intergenic 25.0%
!!! TAAGCAAGAGTATTACTAAT+AGG - chr2_3:40348955-40348974 Msa0291690:intron 25.0%
! GTATTACTAATAGGATTACA+AGG - chr2_3:40348964-40348983 Msa0291690:intron 25.0%
! TCAAAAGAAATGTATCACAA+AGG - chr2_3:40349115-40349134 Msa0291690:intron 25.0%
! CAACAAACATACATCAATTT+CGG - chr2_3:40349234-40349253 Msa0291690:intron 25.0%
! TTGCTTGTATAATTATTGAC+TGG + chr2_3:40349297-40349316 None:intergenic 25.0%
! ATTATACAAGCAATGATCAA+AGG - chr2_3:40349304-40349323 Msa0291690:CDS 25.0%
! TTAATCGAAGAATTTGATGA+TGG + chr2_3:40349390-40349409 None:intergenic 25.0%
!! AGTTGCTATCATTTGATAAT+TGG - chr2_3:40349424-40349443 Msa0291690:CDS 25.0%
!! GTTGCTATCATTTGATAATT+GGG - chr2_3:40349425-40349444 Msa0291690:CDS 25.0%
TATGAACGATGATTTCAACA+CGG - chr2_3:40347359-40347378 Msa0291690:CDS 30.0%
TTGATGAGATCAATAGCAAT+AGG + chr2_3:40347498-40347517 None:intergenic 30.0%
GTTAGATGACAACATATACT+TGG + chr2_3:40347558-40347577 None:intergenic 30.0%
TAGAAGAAATCACTATCGAA+AGG - chr2_3:40347676-40347695 Msa0291690:CDS 30.0%
AGAAGAAATCACTATCGAAA+GGG - chr2_3:40347677-40347696 Msa0291690:CDS 30.0%
TAATCAAACTATGTGTGTCT+GGG + chr2_3:40347766-40347785 None:intergenic 30.0%
ATAATCAAACTATGTGTGTC+TGG + chr2_3:40347767-40347786 None:intergenic 30.0%
AATTATTCCTTTGTAGCTGA+TGG + chr2_3:40348037-40348056 None:intergenic 30.0%
! TCCTATATTTTCTTCCTCTT+TGG + chr2_3:40348333-40348352 None:intergenic 30.0%
AAACCAATATACTCAAATGG+AGG - chr2_3:40348412-40348431 Msa0291690:CDS 30.0%
AAAACACTTGTTTATTACCG+TGG - chr2_3:40348463-40348482 Msa0291690:CDS 30.0%
! AGCATAGGAAATGTTTGTTT+TGG + chr2_3:40348557-40348576 None:intergenic 30.0%
ATCAACATCATTCTTAGCAT+AGG + chr2_3:40348572-40348591 None:intergenic 30.0%
AAACAATAAAAGATTGGTGC+TGG + chr2_3:40348626-40348645 None:intergenic 30.0%
! TGTTTCATGTTGATTGTACT+GGG + chr2_3:40349000-40349019 None:intergenic 30.0%
! ATGTTTCATGTTGATTGTAC+TGG + chr2_3:40349001-40349020 None:intergenic 30.0%
! GTCCTAATGATTTTTGTCTA+TGG - chr2_3:40349060-40349079 Msa0291690:intron 30.0%
TGCCATAGACAAAAATCATT+AGG + chr2_3:40349065-40349084 None:intergenic 30.0%
TTAGCTAATTGTTTCATCTC+TGG + chr2_3:40349150-40349169 None:intergenic 30.0%
ATCAAATTCTTCGATTAAGC+AGG - chr2_3:40349392-40349411 Msa0291690:CDS 30.0%
TATGAACGATGATTTCAACA+CGG - chr2_3:40347359-40347378 Msa0291690:CDS 30.0%
TTGATGAGATCAATAGCAAT+AGG + chr2_3:40347498-40347517 None:intergenic 30.0%
GTTAGATGACAACATATACT+TGG + chr2_3:40347558-40347577 None:intergenic 30.0%
TAGAAGAAATCACTATCGAA+AGG - chr2_3:40347676-40347695 Msa0291690:CDS 30.0%
AGAAGAAATCACTATCGAAA+GGG - chr2_3:40347677-40347696 Msa0291690:CDS 30.0%
TAATCAAACTATGTGTGTCT+GGG + chr2_3:40347766-40347785 None:intergenic 30.0%
ATAATCAAACTATGTGTGTC+TGG + chr2_3:40347767-40347786 None:intergenic 30.0%
AATTATTCCTTTGTAGCTGA+TGG + chr2_3:40348037-40348056 None:intergenic 30.0%
! TCCTATATTTTCTTCCTCTT+TGG + chr2_3:40348333-40348352 None:intergenic 30.0%
AAACCAATATACTCAAATGG+AGG - chr2_3:40348412-40348431 Msa0291690:CDS 30.0%
AAAACACTTGTTTATTACCG+TGG - chr2_3:40348463-40348482 Msa0291690:CDS 30.0%
! AGCATAGGAAATGTTTGTTT+TGG + chr2_3:40348557-40348576 None:intergenic 30.0%
ATCAACATCATTCTTAGCAT+AGG + chr2_3:40348572-40348591 None:intergenic 30.0%
AAACAATAAAAGATTGGTGC+TGG + chr2_3:40348626-40348645 None:intergenic 30.0%
! TGTTTCATGTTGATTGTACT+GGG + chr2_3:40349000-40349019 None:intergenic 30.0%
! ATGTTTCATGTTGATTGTAC+TGG + chr2_3:40349001-40349020 None:intergenic 30.0%
! GTCCTAATGATTTTTGTCTA+TGG - chr2_3:40349060-40349079 Msa0291690:intron 30.0%
TGCCATAGACAAAAATCATT+AGG + chr2_3:40349065-40349084 None:intergenic 30.0%
TTAGCTAATTGTTTCATCTC+TGG + chr2_3:40349150-40349169 None:intergenic 30.0%
ATCAAATTCTTCGATTAAGC+AGG - chr2_3:40349392-40349411 Msa0291690:CDS 30.0%
GTAACAAGTTCTTCATCTGT+AGG + chr2_3:40347444-40347463 None:intergenic 35.0%
GAAGAAATCACTATCGAAAG+GGG - chr2_3:40347678-40347697 Msa0291690:CDS 35.0%
! TAATCATCTTTCTGGAGAAG+TGG - chr2_3:40347837-40347856 Msa0291690:intron 35.0%
!!! TGGTCATTTTTTTTTACCGC+TGG - chr2_3:40347857-40347876 Msa0291690:intron 35.0%
!!! TGCTACTTTTTTTGCCAAAG+AGG - chr2_3:40348316-40348335 Msa0291690:CDS 35.0%
GCCAAAGAGGAAGAAAATAT+AGG - chr2_3:40348329-40348348 Msa0291690:CDS 35.0%
TCTCCTCCATTTGAGTATAT+TGG + chr2_3:40348418-40348437 None:intergenic 35.0%
ATATACTCAAATGGAGGAGA+AGG - chr2_3:40348418-40348437 Msa0291690:CDS 35.0%
!! GAAAAGGTACCAAAACTGAT+TGG - chr2_3:40348494-40348513 Msa0291690:CDS 35.0%
! ATGCATCATCCAATCAGTTT+TGG + chr2_3:40348506-40348525 None:intergenic 35.0%
!! GTTTTGGCATCAATGTTTGA+TGG + chr2_3:40348541-40348560 None:intergenic 35.0%
! CGTTAATGTGATGATGTTCA+TGG + chr2_3:40349266-40349285 None:intergenic 35.0%
TGAACATCATCACATTAACG+AGG - chr2_3:40349266-40349285 Msa0291690:intron 35.0%
CAAGCAATGATCAAAGGAAT+CGG - chr2_3:40349310-40349329 Msa0291690:CDS 35.0%
! TTTGATAATTGGGATGAGCT+TGG - chr2_3:40349435-40349454 Msa0291690:CDS 35.0%
GTAACAAGTTCTTCATCTGT+AGG + chr2_3:40347444-40347463 None:intergenic 35.0%
GAAGAAATCACTATCGAAAG+GGG - chr2_3:40347678-40347697 Msa0291690:CDS 35.0%
! TAATCATCTTTCTGGAGAAG+TGG - chr2_3:40347837-40347856 Msa0291690:intron 35.0%
!!! TGGTCATTTTTTTTTACCGC+TGG - chr2_3:40347857-40347876 Msa0291690:intron 35.0%
!!! TGCTACTTTTTTTGCCAAAG+AGG - chr2_3:40348316-40348335 Msa0291690:CDS 35.0%
GCCAAAGAGGAAGAAAATAT+AGG - chr2_3:40348329-40348348 Msa0291690:CDS 35.0%
TCTCCTCCATTTGAGTATAT+TGG + chr2_3:40348418-40348437 None:intergenic 35.0%
ATATACTCAAATGGAGGAGA+AGG - chr2_3:40348418-40348437 Msa0291690:CDS 35.0%
!! GAAAAGGTACCAAAACTGAT+TGG - chr2_3:40348494-40348513 Msa0291690:CDS 35.0%
! ATGCATCATCCAATCAGTTT+TGG + chr2_3:40348506-40348525 None:intergenic 35.0%
!! GTTTTGGCATCAATGTTTGA+TGG + chr2_3:40348541-40348560 None:intergenic 35.0%
! CGTTAATGTGATGATGTTCA+TGG + chr2_3:40349266-40349285 None:intergenic 35.0%
TGAACATCATCACATTAACG+AGG - chr2_3:40349266-40349285 Msa0291690:intron 35.0%
CAAGCAATGATCAAAGGAAT+CGG - chr2_3:40349310-40349329 Msa0291690:CDS 35.0%
! TTTGATAATTGGGATGAGCT+TGG - chr2_3:40349435-40349454 Msa0291690:CDS 35.0%
CAAGTTCTTCATCTGTAGGA+TGG + chr2_3:40347440-40347459 None:intergenic 40.0%
CATATACTTGGAAGATCCCA+AGG + chr2_3:40347546-40347565 None:intergenic 40.0%
TATGCAGAAGCAAATGTAGC+TGG - chr2_3:40348280-40348299 Msa0291690:CDS 40.0%
GTTAGACCAAATAGAGTCAC+TGG - chr2_3:40348358-40348377 Msa0291690:CDS 40.0%
GGAGAAGGAAATGATTGTGT+TGG - chr2_3:40348433-40348452 Msa0291690:CDS 40.0%
! TCATGTTGATTGTACTGGGT+TGG + chr2_3:40348996-40349015 None:intergenic 40.0%
! GATTTTTGTCTATGGCATGC+AGG - chr2_3:40349068-40349087 Msa0291690:intron 40.0%
TCTATGGCATGCAGGAAATT+TGG - chr2_3:40349076-40349095 Msa0291690:intron 40.0%
CAAGTTCTTCATCTGTAGGA+TGG + chr2_3:40347440-40347459 None:intergenic 40.0%
CATATACTTGGAAGATCCCA+AGG + chr2_3:40347546-40347565 None:intergenic 40.0%
TATGCAGAAGCAAATGTAGC+TGG - chr2_3:40348280-40348299 Msa0291690:CDS 40.0%
GTTAGACCAAATAGAGTCAC+TGG - chr2_3:40348358-40348377 Msa0291690:CDS 40.0%
GGAGAAGGAAATGATTGTGT+TGG - chr2_3:40348433-40348452 Msa0291690:CDS 40.0%
! TCATGTTGATTGTACTGGGT+TGG + chr2_3:40348996-40349015 None:intergenic 40.0%
! GATTTTTGTCTATGGCATGC+AGG - chr2_3:40349068-40349087 Msa0291690:intron 40.0%
TCTATGGCATGCAGGAAATT+TGG - chr2_3:40349076-40349095 Msa0291690:intron 40.0%
! GATGATGATGTTCCACTTCC+TGG - chr2_3:40347405-40347424 Msa0291690:CDS 45.0%
TGGAAACGAAATCCAGGAAG+TGG + chr2_3:40347420-40347439 None:intergenic 45.0%
GTAGGATGGAAACGAAATCC+AGG + chr2_3:40347426-40347445 None:intergenic 45.0%
AATCATGATCACGTCTCCAG+CGG + chr2_3:40347876-40347895 None:intergenic 45.0%
TGATCAGCCATCAGCTACAA+AGG - chr2_3:40348027-40348046 Msa0291690:intron 45.0%
AAATGTAGCTGGAGCAGAGA+AGG - chr2_3:40348291-40348310 Msa0291690:CDS 45.0%
! TCTGGATTCTGGAAAGCAAC+TGG - chr2_3:40348382-40348401 Msa0291690:CDS 45.0%
! GTTTATTACCGTGGTAGTGC+TGG - chr2_3:40348472-40348491 Msa0291690:CDS 45.0%
! TACCTTTTCCAGCACTACCA+CGG + chr2_3:40348483-40348502 None:intergenic 45.0%
ACGTCAAGCCGTTTGTAACA+CGG - chr2_3:40349173-40349192 Msa0291690:intron 45.0%
CACCAGAATGGGCAACAATA+TGG - chr2_3:40349197-40349216 Msa0291690:intron 45.0%
CTCCATATTGTTGCCCATTC+TGG + chr2_3:40349202-40349221 None:intergenic 45.0%
!! AGATCAGTTGAGCTCTAGAG+TGG - chr2_3:40349341-40349360 Msa0291690:CDS 45.0%
ATGAGCTTGGATCAGTTGTG+AGG - chr2_3:40349448-40349467 Msa0291690:CDS 45.0%
! GATGATGATGTTCCACTTCC+TGG - chr2_3:40347405-40347424 Msa0291690:CDS 45.0%
TGGAAACGAAATCCAGGAAG+TGG + chr2_3:40347420-40347439 None:intergenic 45.0%
GTAGGATGGAAACGAAATCC+AGG + chr2_3:40347426-40347445 None:intergenic 45.0%
AATCATGATCACGTCTCCAG+CGG + chr2_3:40347876-40347895 None:intergenic 45.0%
TGATCAGCCATCAGCTACAA+AGG - chr2_3:40348027-40348046 Msa0291690:intron 45.0%
AAATGTAGCTGGAGCAGAGA+AGG - chr2_3:40348291-40348310 Msa0291690:CDS 45.0%
! TCTGGATTCTGGAAAGCAAC+TGG - chr2_3:40348382-40348401 Msa0291690:CDS 45.0%
! GTTTATTACCGTGGTAGTGC+TGG - chr2_3:40348472-40348491 Msa0291690:CDS 45.0%
! TACCTTTTCCAGCACTACCA+CGG + chr2_3:40348483-40348502 None:intergenic 45.0%
ACGTCAAGCCGTTTGTAACA+CGG - chr2_3:40349173-40349192 Msa0291690:intron 45.0%
CACCAGAATGGGCAACAATA+TGG - chr2_3:40349197-40349216 Msa0291690:intron 45.0%
CTCCATATTGTTGCCCATTC+TGG + chr2_3:40349202-40349221 None:intergenic 45.0%
!! AGATCAGTTGAGCTCTAGAG+TGG - chr2_3:40349341-40349360 Msa0291690:CDS 45.0%
ATGAGCTTGGATCAGTTGTG+AGG - chr2_3:40349448-40349467 Msa0291690:CDS 45.0%
!! AGAAAATAATAAAATAATTA+TGG + chr2_3:40348774-40348793 None:intergenic 5.0%
!! AGAAAATAATAAAATAATTA+TGG + chr2_3:40348774-40348793 None:intergenic 5.0%
CCAGAGCCAGTGACTCTATT+TGG + chr2_3:40348367-40348386 None:intergenic 50.0%
!! CCAAATAGAGTCACTGGCTC+TGG - chr2_3:40348364-40348383 Msa0291690:CDS 50.0%
! TACCGTGGTAGTGCTGGAAA+AGG - chr2_3:40348478-40348497 Msa0291690:CDS 50.0%
CGTCAAGCCGTTTGTAACAC+GGG - chr2_3:40349174-40349193 Msa0291690:intron 50.0%
TCTGGTGCCCGTGTTACAAA+CGG + chr2_3:40349184-40349203 None:intergenic 50.0%
TTGTAACACGGGCACCAGAA+TGG - chr2_3:40349185-40349204 Msa0291690:intron 50.0%
TGTAACACGGGCACCAGAAT+GGG - chr2_3:40349186-40349205 Msa0291690:intron 50.0%
CCAGAGCCAGTGACTCTATT+TGG + chr2_3:40348367-40348386 None:intergenic 50.0%
!! CCAAATAGAGTCACTGGCTC+TGG - chr2_3:40348364-40348383 Msa0291690:CDS 50.0%
! TACCGTGGTAGTGCTGGAAA+AGG - chr2_3:40348478-40348497 Msa0291690:CDS 50.0%
CGTCAAGCCGTTTGTAACAC+GGG - chr2_3:40349174-40349193 Msa0291690:intron 50.0%
TCTGGTGCCCGTGTTACAAA+CGG + chr2_3:40349184-40349203 None:intergenic 50.0%
TTGTAACACGGGCACCAGAA+TGG - chr2_3:40349185-40349204 Msa0291690:intron 50.0%
TGTAACACGGGCACCAGAAT+GGG - chr2_3:40349186-40349205 Msa0291690:intron 50.0%
!! GAGTCACTGGCTCTGGATTC+TGG - chr2_3:40348371-40348390 Msa0291690:CDS 55.0%
!! GAGTCACTGGCTCTGGATTC+TGG - chr2_3:40348371-40348390 Msa0291690:CDS 55.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 40347354 40349497 40347354 ID=Msa0291690;Name=Msa0291690
chr2_3 mRNA 40347354 40349497 40347354 ID=Msa0291690-mRNA-1;Parent=Msa0291690;Name=Msa0291690-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|3|0|310
chr2_3 exon 40349293 40349497 40349293 ID=Msa0291690-mRNA-1:exon:12962;Parent=Msa0291690-mRNA-1
chr2_3 exon 40348245 40348564 40348245 ID=Msa0291690-mRNA-1:exon:12961;Parent=Msa0291690-mRNA-1
chr2_3 exon 40347354 40347761 40347354 ID=Msa0291690-mRNA-1:exon:12960;Parent=Msa0291690-mRNA-1
chr2_3 CDS 40349293 40349497 40349293 ID=Msa0291690-mRNA-1:cds;Parent=Msa0291690-mRNA-1
chr2_3 CDS 40348245 40348564 40348245 ID=Msa0291690-mRNA-1:cds;Parent=Msa0291690-mRNA-1
chr2_3 CDS 40347354 40347761 40347354 ID=Msa0291690-mRNA-1:cds;Parent=Msa0291690-mRNA-1
Gene Sequence

>Msa0291690

ATGGGTATGAACGATGATTTCAACACGGATAATGAATATGTTGTAGATGGTGATGATGATGTTCCACTTCCTGGATTTCGTTTCCATCCTACAGATGAAGAACTTGTTACTTTTTATCTTAGAAGAAAACTTGACAAGAAACCTATTGCTATTGATCTCATCAAACAAATTGATATCTACAAATATGATCCTTGGGATCTTCCAAAAGCAAATGTAGCTGGAGCAGAGAAGGAATGCTACTTTTTTTGCCAAAGAGGAAGAAAATATAGGAACAGCGTTAGACCAAATAGAGTCACTGGCTCTGGATTCTGGAAAGCAACTGGAATAGATAAACCAATATACTCAAATGGAGGAGAAGGAAATGATTGTGTTGGACTCAAAAAAACACTTGTTTATTACCGTGGTAGTGCTGGAAAAGGTACCAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCATCAAACATTGATGCCAAAACAAACATTTCCTATGCTAAGAATGATGTTGATTATGCTCATGAAGATGAAATTTGGACATTGTGTAGAATTTTCAAAAGAAATGTATCACAAAGGAAACACATACCAGAGATGAAACAATTAGCTAACAAACGTCAAGCCGTTTGTAACACGGGCACCAGAATGGGCAACAATATGGAGTTCAACACAAATCAACAAACATACATCAATTTCGGTGCAAGCCATGAACATCATCACATTAACGAGGACAAACCAGTCAATAATTATACAAGCAATGATCAAAGGAATCGGTTTCATGTAGATCAGTTGAGCTCTAGAGTGGCTCATCAACAAAATAATGTAACACCATCATCAAATTCTTCGATTAAGCAGGATGCTAATGAGTTGCTATCATTTGATAATTGGGATGAGCTTGGATCAGTTGTGAGGTTTGCTGTTGATTCACCTAGTTTGTAA
Protein sequence

>Msa0291690

MGMNDDFNTDNEYVVDGDDDVPLPGFRFHPTDEELVTFYLRRKLDKKPIAIDLIKQIDIYKYDPWDLPKANVAGAEKECYFFCQRGRKYRNSVRPNRVTGSGFWKATGIDKPIYSNGGEGNDCVGLKKTLVYYRGSAGKGTKTDWMMHEFRLPSNIDAKTNISYAKNDVDYAHEDEIWTLCRIFKRNVSQRKHIPEMKQLANKRQAVCNTGTRMGNNMEFNTNQQTYINFGASHEHHHINEDKPVNNYTSNDQRNRFHVDQLSSRVAHQQNNVTPSSNSSIKQDANELLSFDNWDELGSVVRFAVDSPSL*