Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293770 | GAU51660.1 | 65.249 | 682 | 131 | 11 | 65 | 679 | 1 | 643 | 0.0 | 808 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293770 | sp|Q9SZL8|FRS5_ARATH | 29.502 | 261 | 166 | 5 | 32 | 292 | 70 | 312 | 2.21e-25 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293770 | A0A2Z6PJC0 | 65.249 | 682 | 131 | 11 | 65 | 679 | 1 | 643 | 0.0 | 808 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0293770 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293770 | MtrunA17_Chr3g0088371 | 79.747 | 158 | 29 | 1 | 525 | 679 | 1 | 158 | 1.39e-81 | 257 |
| Msa0293770 | MtrunA17_Chr1g0172971 | 82.906 | 117 | 19 | 1 | 1 | 116 | 1 | 117 | 9.67e-56 | 199 |
| Msa0293770 | MtrunA17_Chr7g0258861 | 32.707 | 266 | 157 | 5 | 36 | 298 | 8 | 254 | 1.40e-39 | 148 |
| Msa0293770 | MtrunA17_Chr6g0475591 | 87.671 | 73 | 9 | 0 | 188 | 260 | 1 | 73 | 4.93e-39 | 138 |
| Msa0293770 | MtrunA17_Chr1g0202341 | 25.743 | 606 | 332 | 24 | 34 | 568 | 50 | 608 | 1.54e-35 | 143 |
| Msa0293770 | MtrunA17_Chr2g0324011 | 31.321 | 265 | 159 | 4 | 36 | 297 | 8 | 252 | 1.31e-33 | 136 |
| Msa0293770 | MtrunA17_Chr3g0082121 | 30.000 | 260 | 155 | 6 | 41 | 300 | 49 | 281 | 1.25e-27 | 119 |
| Msa0293770 | MtrunA17_Chr3g0082121 | 29.592 | 294 | 150 | 10 | 345 | 634 | 415 | 655 | 5.54e-23 | 104 |
| Msa0293770 | MtrunA17_Chr5g0448761 | 27.925 | 265 | 171 | 5 | 31 | 292 | 56 | 303 | 4.82e-24 | 107 |
| Msa0293770 | MtrunA17_Chr1g0164591 | 32.335 | 167 | 104 | 2 | 131 | 297 | 1 | 158 | 1.13e-23 | 102 |
| Msa0293770 | MtrunA17_Chr8g0363841 | 29.365 | 252 | 153 | 7 | 40 | 288 | 22 | 251 | 2.42e-22 | 102 |
| Msa0293770 | MtrunA17_Chr2g0296781 | 27.799 | 259 | 159 | 6 | 39 | 295 | 1 | 233 | 8.48e-21 | 97.4 |
| Msa0293770 | MtrunA17_Chr1g0203721 | 26.259 | 278 | 162 | 8 | 40 | 302 | 68 | 317 | 2.43e-20 | 96.3 |
| Msa0293770 | MtrunA17_Chr2g0287651 | 26.236 | 263 | 169 | 6 | 39 | 297 | 79 | 320 | 9.60e-18 | 87.8 |
| Msa0293770 | MtrunA17_Chr5g0441581 | 25.676 | 296 | 175 | 9 | 32 | 313 | 26 | 290 | 9.78e-18 | 87.8 |
| Msa0293770 | MtrunA17_Chr6g0458391 | 25.856 | 263 | 158 | 5 | 38 | 300 | 228 | 453 | 2.28e-17 | 86.7 |
| Msa0293770 | MtrunA17_Chr5g0431001 | 27.138 | 269 | 171 | 8 | 40 | 300 | 66 | 317 | 5.13e-17 | 84.7 |
| Msa0293770 | MtrunA17_Chr1g0198761 | 25.484 | 310 | 191 | 9 | 26 | 314 | 38 | 328 | 8.76e-16 | 81.6 |
| Msa0293770 | MtrunA17_Chr2g0276841 | 24.125 | 257 | 171 | 7 | 49 | 300 | 84 | 321 | 2.94e-15 | 79.7 |
| Msa0293770 | MtrunA17_Chr1g0196541 | 25.869 | 259 | 162 | 8 | 39 | 294 | 1 | 232 | 5.58e-15 | 79.0 |
| Msa0293770 | MtrunA17_Chr2g0290391 | 25.632 | 277 | 172 | 8 | 38 | 300 | 54 | 310 | 1.34e-14 | 77.8 |
| Msa0293770 | MtrunA17_Chr1g0203051 | 23.482 | 247 | 166 | 4 | 50 | 294 | 94 | 319 | 1.35e-14 | 77.4 |
| Msa0293770 | MtrunA17_Chr6g0477261 | 33.621 | 116 | 77 | 0 | 180 | 295 | 7 | 122 | 1.40e-14 | 77.4 |
| Msa0293770 | MtrunA17_Chr2g0294841 | 25.651 | 269 | 171 | 9 | 41 | 300 | 51 | 299 | 2.67e-14 | 76.6 |
| Msa0293770 | MtrunA17_Chr2g0291591 | 24.916 | 297 | 164 | 11 | 16 | 294 | 44 | 299 | 6.80e-14 | 75.1 |
| Msa0293770 | MtrunA17_Chr5g0440451 | 22.887 | 284 | 170 | 7 | 34 | 300 | 42 | 293 | 6.34e-13 | 72.4 |
| Msa0293770 | MtrunA17_Chr2g0329031 | 23.664 | 262 | 167 | 6 | 41 | 300 | 20 | 250 | 1.62e-12 | 70.9 |
| Msa0293770 | MtrunA17_Chr3g0118611 | 24.161 | 298 | 171 | 10 | 331 | 626 | 313 | 557 | 6.27e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0293770 | AT4G38180.1 | 29.502 | 261 | 166 | 5 | 32 | 292 | 70 | 312 | 2.25e-26 | 115 |
| Msa0293770 | AT5G28530.3 | 21.918 | 584 | 372 | 18 | 40 | 567 | 60 | 615 | 1.45e-19 | 94.0 |
| Msa0293770 | AT5G28530.2 | 21.918 | 584 | 372 | 18 | 40 | 567 | 60 | 615 | 1.45e-19 | 94.0 |
| Msa0293770 | AT5G28530.1 | 23.810 | 273 | 178 | 6 | 40 | 300 | 60 | 314 | 1.16e-15 | 81.3 |
| Msa0293770 | AT4G15090.1 | 23.028 | 317 | 174 | 7 | 344 | 648 | 420 | 678 | 9.32e-15 | 78.6 |
| Msa0293770 | AT4G15090.5 | 23.028 | 317 | 174 | 7 | 344 | 648 | 420 | 678 | 9.32e-15 | 78.6 |
| Msa0293770 | AT4G15090.3 | 23.028 | 317 | 174 | 7 | 344 | 648 | 420 | 678 | 9.32e-15 | 78.6 |
| Msa0293770 | AT4G15090.2 | 23.028 | 317 | 174 | 7 | 344 | 648 | 420 | 678 | 9.32e-15 | 78.6 |
| Msa0293770 | AT4G15090.4 | 23.028 | 317 | 174 | 7 | 344 | 648 | 420 | 678 | 9.32e-15 | 78.6 |
| Msa0293770 | AT1G10240.2 | 24.231 | 260 | 167 | 9 | 49 | 300 | 62 | 299 | 1.55e-14 | 77.8 |
| Msa0293770 | AT1G10240.1 | 24.231 | 260 | 167 | 9 | 49 | 300 | 62 | 299 | 1.55e-14 | 77.8 |
| Msa0293770 | AT4G19990.1 | 34.586 | 133 | 73 | 4 | 498 | 628 | 438 | 558 | 5.63e-11 | 66.2 |
| Msa0293770 | AT4G19990.5 | 34.586 | 133 | 73 | 4 | 498 | 628 | 495 | 615 | 5.64e-11 | 66.6 |
| Msa0293770 | AT4G19990.7 | 34.586 | 133 | 73 | 4 | 498 | 628 | 509 | 629 | 5.70e-11 | 66.6 |
| Msa0293770 | AT1G76320.3 | 23.188 | 276 | 172 | 9 | 50 | 321 | 12 | 251 | 5.79e-11 | 66.2 |
| Msa0293770 | AT4G19990.3 | 34.586 | 133 | 73 | 4 | 498 | 628 | 495 | 615 | 5.94e-11 | 66.2 |
| Msa0293770 | AT4G19990.4 | 34.586 | 133 | 73 | 4 | 498 | 628 | 495 | 615 | 5.94e-11 | 66.2 |
| Msa0293770 | AT2G27110.2 | 22.742 | 299 | 176 | 8 | 4 | 300 | 23 | 268 | 6.82e-11 | 66.2 |
| Msa0293770 | AT2G27110.1 | 22.742 | 299 | 176 | 8 | 4 | 300 | 23 | 268 | 6.82e-11 | 66.2 |
| Msa0293770 | AT1G76320.2 | 23.188 | 276 | 172 | 9 | 50 | 321 | 12 | 251 | 7.00e-11 | 66.2 |
| Msa0293770 | AT1G76320.1 | 23.188 | 276 | 172 | 9 | 50 | 321 | 12 | 251 | 7.01e-11 | 66.2 |
| Msa0293770 | AT1G76320.4 | 23.188 | 276 | 172 | 9 | 50 | 321 | 12 | 251 | 7.01e-11 | 66.2 |
| Msa0293770 | AT4G19990.6 | 34.586 | 133 | 73 | 4 | 498 | 628 | 495 | 615 | 7.10e-11 | 66.2 |
| Msa0293770 | AT4G19990.2 | 34.586 | 133 | 73 | 4 | 498 | 628 | 495 | 615 | 7.10e-11 | 66.2 |
Find 102 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 2_3:-45260682 | None:intergenic |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 2_3:+45259814 | Msa0293770:CDS |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2_3:+45258455 | Msa0293770:CDS |
| CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2_3:+45258758 | Msa0293770:CDS |
| TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 2_3:-45260676 | None:intergenic |
| GGTTTCCAATGTTGATGTTT+TGG | 0.319846 | 2_3:+45260111 | Msa0293770:CDS |
| TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 2_3:+45260528 | Msa0293770:CDS |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2_3:-45258505 | None:intergenic |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2_3:-45258808 | None:intergenic |
| GAGGGATAATCATGCTGATT+TGG | 0.346844 | 2_3:+45259847 | Msa0293770:CDS |
| GTCTTTAGTGCCAACATTCA+TGG | 0.367086 | 2_3:-45260404 | None:intergenic |
| CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 2_3:+45260520 | Msa0293770:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 2_3:+45258512 | Msa0293770:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 2_3:+45258815 | Msa0293770:CDS |
| TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 2_3:+45259856 | Msa0293770:CDS |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2_3:+45258504 | Msa0293770:CDS |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2_3:+45258807 | Msa0293770:CDS |
| TTTCAATTTATCATATCTAA+TGG | 0.390380 | 2_3:+45257592 | None:intergenic |
| TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 2_3:-45257975 | None:intergenic |
| AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 2_3:+45260668 | Msa0293770:CDS |
| TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 2_3:-45260658 | None:intergenic |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 2_3:+45259988 | Msa0293770:CDS |
| CCATGATTCTTTATCACTAA+AGG | 0.406174 | 2_3:-45257736 | None:intergenic |
| TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 2_3:+45257746 | Msa0293770:CDS |
| CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 2_3:+45260236 | Msa0293770:CDS |
| GATTATGATCTTCAAACCTT+GGG | 0.413114 | 2_3:-45260159 | None:intergenic |
| ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 2_3:+45257817 | Msa0293770:CDS |
| GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 2_3:+45260194 | Msa0293770:CDS |
| CGATTATGATCTTCAAACCT+TGG | 0.425681 | 2_3:-45260160 | None:intergenic |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 2_3:+45258152 | Msa0293770:CDS |
| AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 2_3:+45258034 | Msa0293770:CDS |
| TGAATGTCTATAAGATATAT+AGG | 0.445219 | 2_3:+45258066 | Msa0293770:CDS |
| GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2_3:+45258017 | Msa0293770:CDS |
| CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 2_3:-45260337 | None:intergenic |
| CGTTATGTTTGTAACAAAGA+AGG | 0.449439 | 2_3:+45257900 | Msa0293770:CDS |
| GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 2_3:+45258182 | Msa0293770:CDS |
| ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 2_3:+45257671 | Msa0293770:CDS |
| CTTGAAAACATGTCGACATA+AGG | 0.459050 | 2_3:-45260263 | None:intergenic |
| CTCAAGTAGCGCAAATGCTC+TGG | 0.460440 | 2_3:-45258122 | None:intergenic |
| ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 2_3:+45260237 | Msa0293770:CDS |
| GAAGTGATGGGTCAAGGAGT+TGG | 0.461715 | 2_3:+45258227 | Msa0293770:CDS |
| ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 2_3:+45257866 | Msa0293770:CDS |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 2_3:-45259990 | None:intergenic |
| TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 2_3:-45258011 | None:intergenic |
| TTTAATTATGCATATAACAC+TGG | 0.485542 | 2_3:+45257804 | Msa0293770:CDS |
| CTGTCTGTGAACCATCTGTT+GGG | 0.487793 | 2_3:+45260629 | Msa0293770:CDS |
| TCTAATGACAACTCGTCAAA+AGG | 0.488137 | 2_3:+45258295 | Msa0293770:CDS |
| CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 2_3:+45257860 | Msa0293770:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 2_3:+45260004 | Msa0293770:CDS |
| CGTCAAAAGGAGATGGTGGC+TGG | 0.492100 | 2_3:+45258308 | Msa0293770:CDS |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 2_3:+45259828 | Msa0293770:CDS |
| GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 2_3:-45259908 | None:intergenic |
| AATGAAGATCTTTCGAAACC+AGG | 0.499070 | 2_3:+45258362 | Msa0293770:CDS |
| ATTGGTCTTCAGCTTGGGTG+AGG | 0.501327 | 2_3:+45259693 | Msa0293770:intron |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 2_3:-45258400 | None:intergenic |
| TGTCTTCTGCAGCATCAACT+TGG | 0.502977 | 2_3:-45258703 | None:intergenic |
| GCTGTCTGTGAACCATCTGT+TGG | 0.504047 | 2_3:+45260628 | Msa0293770:CDS |
| ATCATAATCGACTTGATGAA+AGG | 0.507955 | 2_3:+45260173 | Msa0293770:CDS |
| TTTAAGTCCGCAAATCGAAA+AGG | 0.511750 | 2_3:-45258266 | None:intergenic |
| GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 2_3:-45260153 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 2_3:-45259796 | None:intergenic |
| TGTCTATAAGATATATAGGT+GGG | 0.523740 | 2_3:+45258070 | Msa0293770:CDS |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 2_3:+45257911 | Msa0293770:CDS |
| TCATAATCGACTTGATGAAA+GGG | 0.526860 | 2_3:+45260174 | Msa0293770:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 2_3:-45259985 | None:intergenic |
| CTGAAATCTACCATGAATGT+TGG | 0.534154 | 2_3:+45260394 | Msa0293770:CDS |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 2_3:-45259791 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.542065 | 2_3:+45260005 | Msa0293770:CDS |
| CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 2_3:+45257736 | Msa0293770:CDS |
| TGCATCCAAAACATCAACAT+TGG | 0.544202 | 2_3:-45260116 | None:intergenic |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2_3:+45257912 | Msa0293770:CDS |
| AAATGCTCTGGTTTATGTAA+TGG | 0.552634 | 2_3:-45258110 | None:intergenic |
| GTGATGGGTCAAGGAGTTGG+AGG | 0.568802 | 2_3:+45258230 | Msa0293770:CDS |
| TACACGTGTTTGCGCAGATG+CGG | 0.571672 | 2_3:+45260480 | Msa0293770:CDS |
| GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 2_3:-45259909 | None:intergenic |
| TTTGGTGCAGTCCCAACAGA+TGG | 0.581566 | 2_3:-45260640 | None:intergenic |
| TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 2_3:-45259930 | None:intergenic |
| TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 2_3:+45260521 | Msa0293770:CDS |
| ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 2_3:+45260516 | Msa0293770:CDS |
| GAATGAATTCAAGGAATGAG+TGG | 0.593229 | 2_3:-45261223 | None:intergenic |
| TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 2_3:-45260596 | None:intergenic |
| GACAACTCGTCAAAAGGAGA+TGG | 0.599038 | 2_3:+45258301 | Msa0293770:CDS |
| TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 2_3:-45260428 | None:intergenic |
| AACTCGTCAAAAGGAGATGG+TGG | 0.603142 | 2_3:+45258304 | Msa0293770:CDS |
| GATTTCAGCTTATCGACAGA+CGG | 0.603217 | 2_3:-45260379 | None:intergenic |
| TTGAAACAAACCTTTCCCCA+AGG | 0.603300 | 2_3:+45260143 | Msa0293770:CDS |
| ACGTGTTTGCGCAGATGCGG+AGG | 0.605934 | 2_3:+45260483 | Msa0293770:CDS |
| ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 2_3:+45259906 | Msa0293770:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 2_3:+45259991 | Msa0293770:CDS |
| ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 2_3:+45257660 | Msa0293770:CDS |
| AGAACTGGACTGTCACATGT+TGG | 0.620791 | 2_3:-45257960 | None:intergenic |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.621882 | 2_3:+45258235 | Msa0293770:CDS |
| ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 2_3:-45260158 | None:intergenic |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 2_3:+45259829 | Msa0293770:CDS |
| ATGTCTATAAGATATATAGG+TGG | 0.643489 | 2_3:+45258069 | Msa0293770:CDS |
| TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 2_3:-45259950 | None:intergenic |
| GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 2_3:+45260505 | Msa0293770:CDS |
| CATGTCGACATAAGGAACCC+CGG | 0.663279 | 2_3:-45260255 | None:intergenic |
| TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 2_3:+45260238 | Msa0293770:CDS |
| ATGTTGATAATGATAATGAG+AGG | 0.683310 | 2_3:+45260089 | Msa0293770:CDS |
| TGTTGATAATGATAATGAGA+GGG | 0.689129 | 2_3:+45260090 | Msa0293770:CDS |
| GTCAATTCTGATGTAATGCG+CGG | 0.734639 | 2_3:+45261169 | Msa0293770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACGTATTTATTATTATATTT+TGG | + | chr2_3:45260979-45260998 | Msa0293770:intron | 10.0% |
| !!! | TGTTTTTTATGTTATAAGTT+AGG | + | chr2_3:45260808-45260827 | Msa0293770:intron | 15.0% |
| !! | AATTCTTTATTGTTATGTAT+TGG | + | chr2_3:45260906-45260925 | Msa0293770:intron | 15.0% |
| !! | TTTAATTATGCATATAACAC+TGG | + | chr2_3:45257804-45257823 | Msa0293770:CDS | 20.0% |
| !! | CAATTCACAAAATAAGAAAT+CGG | + | chr2_3:45257860-45257879 | Msa0293770:CDS | 20.0% |
| !! | TGAATGTCTATAAGATATAT+AGG | + | chr2_3:45258066-45258085 | Msa0293770:CDS | 20.0% |
| !!! | TTTATATTGATTGAAAAACC+AGG | + | chr2_3:45258665-45258684 | Msa0293770:intron | 20.0% |
| !!! | TGAATGTTTATATTGATTGA+AGG | + | chr2_3:45258659-45258678 | Msa0293770:intron | 20.0% |
| !!! | ATGATGAAAAACTGTTTTAA+TGG | + | chr2_3:45259618-45259637 | Msa0293770:intron | 20.0% |
| !!! | TTGGTTTGAATATTATCTTA+TGG | + | chr2_3:45260925-45260944 | Msa0293770:intron | 20.0% |
| !! | AAACCATTAAACCATAATTA+TGG | + | chr2_3:45261049-45261068 | Msa0293770:intron | 20.0% |
| !! | AAACCATAATTATGGTTTAA+TGG | - | chr2_3:45261055-45261074 | None:intergenic | 20.0% |
| !! | TCTTAACTAAACCATAATTA+TGG | - | chr2_3:45261063-45261082 | None:intergenic | 20.0% |
| !!! | CTTATTTTGTGAATTGTTCT+TGG | - | chr2_3:45257856-45257875 | None:intergenic | 25.0% |
| ! | ACAAAATAAGAAATCGGATA+AGG | + | chr2_3:45257866-45257885 | Msa0293770:CDS | 25.0% |
| ! | ATGTCTATAAGATATATAGG+TGG | + | chr2_3:45258069-45258088 | Msa0293770:CDS | 25.0% |
| ! | TGTCTATAAGATATATAGGT+GGG | + | chr2_3:45258070-45258089 | Msa0293770:CDS | 25.0% |
| !!! | GCTTTAATAAATTCTAAAGC+TGG | + | chr2_3:45258182-45258201 | Msa0293770:CDS | 25.0% |
| !!! | AAGACATAGCTAGTATTTTT+TGG | + | chr2_3:45258417-45258436 | Msa0293770:CDS | 25.0% |
| !!! | AGACATAGCTAGTATTTTTT+GGG | + | chr2_3:45258418-45258437 | Msa0293770:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | chr2_3:45258504-45258523 | Msa0293770:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | - | chr2_3:45258530-45258549 | None:intergenic | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | + | chr2_3:45258577-45258596 | Msa0293770:intron | 25.0% |
| !!! | AAGACATAGCTAGTATTTTT+TGG | + | chr2_3:45258417-45258436 | Msa0293770:CDS | 25.0% |
| !!! | AGACATAGCTAGTATTTTTT+GGG | + | chr2_3:45258418-45258437 | Msa0293770:CDS | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | chr2_3:45258504-45258523 | Msa0293770:CDS | 25.0% |
| ! | AGTACAAAATACTAACCTAA+TGG | - | chr2_3:45258530-45258549 | None:intergenic | 25.0% |
| ! | TGAAATTTGAATGAATGTTC+TGG | + | chr2_3:45258577-45258596 | Msa0293770:intron | 25.0% |
| !!! | CATTTAATGTTCTGGTTTAT+GGG | + | chr2_3:45258990-45259009 | Msa0293770:intron | 25.0% |
| !! | TGTTGTATTTTGTTCTGATT+TGG | + | chr2_3:45259239-45259258 | Msa0293770:intron | 25.0% |
| ! | AAAACACCTTGAAAAACATT+CGG | - | chr2_3:45259456-45259475 | None:intergenic | 25.0% |
| ! | TTTCGATGAGTTAACTAATT+TGG | + | chr2_3:45259548-45259567 | Msa0293770:intron | 25.0% |
| !!! | TGAAAAACTGTTTTAATGGA+AGG | + | chr2_3:45259622-45259641 | Msa0293770:intron | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr2_3:45259814-45259833 | Msa0293770:CDS | 25.0% |
| ! | TGAATAAATGAAAAGCAAGA+TGG | - | chr2_3:45259953-45259972 | None:intergenic | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr2_3:45259988-45260007 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr2_3:45259988-45260007 | Msa0293770:CDS | 25.0% |
| !!! | ATGTTGATAATGATAATGAG+AGG | + | chr2_3:45260089-45260108 | Msa0293770:CDS | 25.0% |
| !!! | TGTTGATAATGATAATGAGA+GGG | + | chr2_3:45260090-45260109 | Msa0293770:CDS | 25.0% |
| !! | CTATACATTTTCACATTTGT+TGG | + | chr2_3:45260951-45260970 | Msa0293770:intron | 25.0% |
| ! | AAACCATTAGACTGTTAATT+TGG | + | chr2_3:45261006-45261025 | Msa0293770:intron | 25.0% |
| ! | AAACCAAATTAACAGTCTAA+TGG | - | chr2_3:45261012-45261031 | None:intergenic | 25.0% |
| !! | ATTTTCAATTCTGAGTTAAG+TGG | + | chr2_3:45261082-45261101 | Msa0293770:intron | 25.0% |
| CCATGATTCTTTATCACTAA+AGG | - | chr2_3:45257739-45257758 | None:intergenic | 30.0% | |
| CCTTTAGTGATAAAGAATCA+TGG | + | chr2_3:45257736-45257755 | Msa0293770:CDS | 30.0% | |
| TAAAGAATCATGGAAGTCTT+TGG | + | chr2_3:45257746-45257765 | Msa0293770:CDS | 30.0% | |
| CGTTATGTTTGTAACAAAGA+AGG | + | chr2_3:45257900-45257919 | Msa0293770:CDS | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr2_3:45257911-45257930 | Msa0293770:CDS | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr2_3:45257912-45257931 | Msa0293770:CDS | 30.0% | |
| TAAAGAAAAACCAGAGGAAA+GGG | + | chr2_3:45258001-45258020 | Msa0293770:CDS | 30.0% | |
| ! | AGCTGGAATATATTTGAAGT+TGG | + | chr2_3:45258034-45258053 | Msa0293770:CDS | 30.0% |
| ! | AAATGCTCTGGTTTATGTAA+TGG | - | chr2_3:45258113-45258132 | None:intergenic | 30.0% |
| !!! | AGAACATCTTTTGAAGTGAT+GGG | + | chr2_3:45258215-45258234 | Msa0293770:CDS | 30.0% |
| TGGATATCATAGTAAAAACC+TGG | - | chr2_3:45258383-45258402 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | + | chr2_3:45258455-45258474 | Msa0293770:CDS | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | - | chr2_3:45258508-45258527 | None:intergenic | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | chr2_3:45258512-45258531 | Msa0293770:CDS | 30.0% | |
| !! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr2_3:45258591-45258610 | Msa0293770:intron | 30.0% |
| TGGATATCATAGTAAAAACC+TGG | - | chr2_3:45258383-45258402 | None:intergenic | 30.0% | |
| CAACAAGATTATGCTCTATT+TGG | + | chr2_3:45258455-45258474 | Msa0293770:CDS | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | - | chr2_3:45258508-45258527 | None:intergenic | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | chr2_3:45258512-45258531 | Msa0293770:CDS | 30.0% | |
| !! | ATGTTCTGGTTTAGAATTGA+AGG | + | chr2_3:45258591-45258610 | Msa0293770:intron | 30.0% |
| AGGTTTAGCATTTAATGTTC+TGG | + | chr2_3:45258982-45259001 | Msa0293770:intron | 30.0% | |
| !! | GCATTTAATGTTCTGGTTTA+TGG | + | chr2_3:45258989-45259008 | Msa0293770:intron | 30.0% |
| AAACACATATGATCTTTCCA+TGG | - | chr2_3:45259053-45259072 | None:intergenic | 30.0% | |
| TTTCTATTTACACAGCACAA+TGG | + | chr2_3:45259198-45259217 | Msa0293770:intron | 30.0% | |
| ATGATTGTCAAAACCAAGAA+AGG | - | chr2_3:45259284-45259303 | None:intergenic | 30.0% | |
| ! | TATGGTTTGAGGTTTCTTAT+TGG | - | chr2_3:45259397-45259416 | None:intergenic | 30.0% |
| ! | TCAATTCCGAATGTTTTTCA+AGG | + | chr2_3:45259447-45259466 | Msa0293770:intron | 30.0% |
| !!! | GTTTTTCAAGGTGTTTTTCA+TGG | + | chr2_3:45259459-45259478 | Msa0293770:intron | 30.0% |
| GAGAATGCAAAGAAAAATCT+CGG | + | chr2_3:45259504-45259523 | Msa0293770:intron | 30.0% | |
| AATCAGATTTCGACTACAAT+TGG | + | chr2_3:45259589-45259608 | Msa0293770:intron | 30.0% | |
| ATCAGATTTCGACTACAATT+GGG | + | chr2_3:45259590-45259609 | Msa0293770:intron | 30.0% | |
| ACTCATTCAAATCTATGCAT+TGG | + | chr2_3:45259675-45259694 | Msa0293770:intron | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | - | chr2_3:45259799-45259818 | None:intergenic | 30.0% | |
| TGGTGTATACTTGTTTACTA+CGG | - | chr2_3:45259933-45259952 | None:intergenic | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr2_3:45259993-45260012 | None:intergenic | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr2_3:45259991-45260010 | Msa0293770:CDS | 30.0% | |
| ! | CAAAGTTTTCACAATTGAGA+AGG | + | chr2_3:45260048-45260067 | Msa0293770:CDS | 30.0% |
| ATTATGATCTTCAAACCTTG+GGG | - | chr2_3:45260161-45260180 | None:intergenic | 30.0% | |
| GATTATGATCTTCAAACCTT+GGG | - | chr2_3:45260162-45260181 | None:intergenic | 30.0% | |
| !! | ATCATAATCGACTTGATGAA+AGG | + | chr2_3:45260173-45260192 | Msa0293770:CDS | 30.0% |
| !! | TCATAATCGACTTGATGAAA+GGG | + | chr2_3:45260174-45260193 | Msa0293770:CDS | 30.0% |
| !! | TCGACATGTTTTCAAGATTT+TGG | + | chr2_3:45260270-45260289 | Msa0293770:CDS | 30.0% |
| !! | ACATGTTTTCAAGATTTTGG+AGG | + | chr2_3:45260273-45260292 | Msa0293770:CDS | 30.0% |
| !!! | CTGCACAATATGTTTTAAAG+CGG | + | chr2_3:45260338-45260357 | Msa0293770:CDS | 30.0% |
| ! | GCATCTGAAATATTTCTCAA+CGG | + | chr2_3:45260505-45260524 | Msa0293770:CDS | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr2_3:45260661-45260680 | None:intergenic | 30.0% |
| AAGAAAGACCAAATCCAATT+AGG | + | chr2_3:45260668-45260687 | Msa0293770:CDS | 30.0% | |
| TTCTTTGACCTAATTGGATT+TGG | - | chr2_3:45260679-45260698 | None:intergenic | 30.0% | |
| GACATAAATTCCTTATAGCT+CGG | + | chr2_3:45260734-45260753 | Msa0293770:intron | 30.0% | |
| ! | TGAGGCTTTAACAATTTAAG+CGG | + | chr2_3:45260777-45260796 | Msa0293770:intron | 30.0% |
| ATAAGTTAGGAAAGATGATG+AGG | + | chr2_3:45260821-45260840 | Msa0293770:intron | 30.0% | |
| ! | TGAGGCTTTAACTAAAAAAG+CGG | + | chr2_3:45260839-45260858 | Msa0293770:intron | 30.0% |
| !!! | GTGTTTCTTGCTGTTTTCAA+TGG | + | chr2_3:45257632-45257651 | Msa0293770:exon | 35.0% |
| ATATCAACTTCATCTGAGAG+TGG | + | chr2_3:45257660-45257679 | Msa0293770:CDS | 35.0% | |
| ATAACACTGGATTCTCTGTT+AGG | + | chr2_3:45257817-45257836 | Msa0293770:CDS | 35.0% | |
| GTCTGCTTAATCCTAAAAAC+AGG | + | chr2_3:45257937-45257956 | Msa0293770:CDS | 35.0% | |
| TTCTCATACTCAACAAGAAC+TGG | - | chr2_3:45257978-45257997 | None:intergenic | 35.0% | |
| GAAAGCTAAAGAAAAACCAG+AGG | + | chr2_3:45257995-45258014 | Msa0293770:CDS | 35.0% | |
| CTAAAGAAAAACCAGAGGAA+AGG | + | chr2_3:45258000-45258019 | Msa0293770:CDS | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | + | chr2_3:45258152-45258171 | Msa0293770:CDS | 35.0% | |
| !!! | GAGAACATCTTTTGAAGTGA+TGG | + | chr2_3:45258214-45258233 | Msa0293770:CDS | 35.0% |
| !! | GAATCTTCCTTTTCGATTTG+CGG | + | chr2_3:45258259-45258278 | Msa0293770:CDS | 35.0% |
| TTTAAGTCCGCAAATCGAAA+AGG | - | chr2_3:45258269-45258288 | None:intergenic | 35.0% | |
| TCTAATGACAACTCGTCAAA+AGG | + | chr2_3:45258295-45258314 | Msa0293770:CDS | 35.0% | |
| AATGAAGATCTTTCGAAACC+AGG | + | chr2_3:45258362-45258381 | Msa0293770:CDS | 35.0% | |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr2_3:45258597-45258616 | Msa0293770:intron | 35.0% |
| ! | TGGTTTAGAATTGAAGGTTC+TGG | + | chr2_3:45258597-45258616 | Msa0293770:intron | 35.0% |
| TGTACAGAGCACAAATTCTA+AGG | - | chr2_3:45259029-45259048 | None:intergenic | 35.0% | |
| ! | CATCGTAAGAGTGTGTTATT+TGG | + | chr2_3:45259301-45259320 | Msa0293770:intron | 35.0% |
| !!! | AGACATCAGCTACTTTTGAT+TGG | + | chr2_3:45259344-45259363 | Msa0293770:intron | 35.0% |
| ! | TTTTTCATGGTCTTTGCTCA+TGG | + | chr2_3:45259472-45259491 | Msa0293770:intron | 35.0% |
| ! | TTTTAATGGAAGGCCTACTT+CGG | + | chr2_3:45259632-45259651 | Msa0293770:intron | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr2_3:45259758-45259777 | Msa0293770:CDS | 35.0% |
| ACATTATGGTTCAGAGAATG+AGG | + | chr2_3:45259828-45259847 | Msa0293770:CDS | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr2_3:45259829-45259848 | Msa0293770:CDS | 35.0% | |
| ! | GGTTTCCAATGTTGATGTTT+TGG | + | chr2_3:45260111-45260130 | Msa0293770:CDS | 35.0% |
| TGCATCCAAAACATCAACAT+TGG | - | chr2_3:45260119-45260138 | None:intergenic | 35.0% | |
| CGATTATGATCTTCAAACCT+TGG | - | chr2_3:45260163-45260182 | None:intergenic | 35.0% | |
| CTTGAAAACATGTCGACATA+AGG | - | chr2_3:45260266-45260285 | None:intergenic | 35.0% | |
| !! | AAGATTTTGGAGGTCTTAAG+TGG | + | chr2_3:45260283-45260302 | Msa0293770:CDS | 35.0% |
| !! | CGCTTTAAAACATATTGTGC+AGG | - | chr2_3:45260340-45260359 | None:intergenic | 35.0% |
| !!! | CACAATATGTTTTAAAGCGG+TGG | + | chr2_3:45260341-45260360 | Msa0293770:CDS | 35.0% |
| CTGAAATCTACCATGAATGT+TGG | + | chr2_3:45260394-45260413 | Msa0293770:CDS | 35.0% | |
| !! | ACTGCTTTTGAAGACTTAGA+AGG | - | chr2_3:45260607-45260626 | None:intergenic | 35.0% |
| GAAGCAAAAGAAAGATGATG+AGG | + | chr2_3:45260759-45260778 | Msa0293770:intron | 35.0% | |
| ! | GAGGCTTTAACAATTTAAGC+GGG | + | chr2_3:45260778-45260797 | Msa0293770:intron | 35.0% |
| ! | AGGCTTTAACAATTTAAGCG+GGG | + | chr2_3:45260779-45260798 | Msa0293770:intron | 35.0% |
| ATCTGAGAGTGGACAATTGA+CGG | + | chr2_3:45257671-45257690 | Msa0293770:CDS | 40.0% | |
| !! | TCACATGTTGGCCTGTTTTT+AGG | - | chr2_3:45257951-45257970 | None:intergenic | 40.0% |
| !!! | TCTTTTGAAGTGATGGGTCA+AGG | + | chr2_3:45258221-45258240 | Msa0293770:CDS | 40.0% |
| !!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr2_3:45258425-45258444 | Msa0293770:CDS | 40.0% |
| !!! | GCTAGTATTTTTTGGGCAGA+TGG | + | chr2_3:45258425-45258444 | Msa0293770:CDS | 40.0% |
| TCCAGCTATGCAAAGATCAT+AGG | + | chr2_3:45259147-45259166 | Msa0293770:intron | 40.0% | |
| ACCTATGATCTTTGCATAGC+TGG | - | chr2_3:45259151-45259170 | None:intergenic | 40.0% | |
| TACATTTCAGCTGCCTTTCT+TGG | + | chr2_3:45259268-45259287 | Msa0293770:intron | 40.0% | |
| TGGTCTGTGTATATGGTTTG+AGG | - | chr2_3:45259408-45259427 | None:intergenic | 40.0% | |
| TCAAACCATATACACAGACC+AGG | + | chr2_3:45259407-45259426 | Msa0293770:intron | 40.0% | |
| !! | TATGCATTGGTCTTCAGCTT+GGG | + | chr2_3:45259688-45259707 | Msa0293770:intron | 40.0% |
| AATCGAACAAGTGAATGGTC+TGG | - | chr2_3:45259794-45259813 | None:intergenic | 40.0% | |
| ! | GAGGGATAATCATGCTGATT+TGG | + | chr2_3:45259847-45259866 | Msa0293770:CDS | 40.0% |
| !! | TCATGCTGATTTGGACTTCA+AGG | + | chr2_3:45259856-45259875 | Msa0293770:CDS | 40.0% |
| TATGAGGAGGACACAACAAA+AGG | + | chr2_3:45260004-45260023 | Msa0293770:CDS | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr2_3:45260005-45260024 | Msa0293770:CDS | 40.0% | |
| TTGAAACAAACCTTTCCCCA+AGG | + | chr2_3:45260143-45260162 | Msa0293770:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+CGG | + | chr2_3:45260236-45260255 | Msa0293770:CDS | 40.0% | |
| ATGTCGTATGTTTGAGAACC+GGG | + | chr2_3:45260237-45260256 | Msa0293770:CDS | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | - | chr2_3:45260382-45260401 | None:intergenic | 40.0% | |
| GTCTTTAGTGCCAACATTCA+TGG | - | chr2_3:45260407-45260426 | None:intergenic | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | - | chr2_3:45260431-45260450 | None:intergenic | 40.0% | |
| ATTTCTCAACGGTGTTCTTG+AGG | + | chr2_3:45260516-45260535 | Msa0293770:CDS | 40.0% | |
| ! | TGAAGACTTAGAAGGCGTAA+CGG | - | chr2_3:45260599-45260618 | None:intergenic | 40.0% |
| AGTCGCTTCTTTGACCTAAT+TGG | - | chr2_3:45260685-45260704 | None:intergenic | 40.0% | |
| TTTGCTTCTTCCGAGCTATA+AGG | - | chr2_3:45260747-45260766 | None:intergenic | 40.0% | |
| GTCAATTCTGATGTAATGCG+CGG | + | chr2_3:45261169-45261188 | Msa0293770:CDS | 40.0% | |
| AGAACTGGACTGTCACATGT+TGG | - | chr2_3:45257963-45257982 | None:intergenic | 45.0% | |
| GAAAAACCAGAGGAAAGGGT+TGG | + | chr2_3:45258005-45258024 | Msa0293770:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+TGG | - | chr2_3:45258014-45258033 | None:intergenic | 45.0% | |
| !! | GAAAGGGTTGGTTGTAAAGC+TGG | + | chr2_3:45258017-45258036 | Msa0293770:CDS | 45.0% |
| GACAACTCGTCAAAAGGAGA+TGG | + | chr2_3:45258301-45258320 | Msa0293770:CDS | 45.0% | |
| AACTCGTCAAAAGGAGATGG+TGG | + | chr2_3:45258304-45258323 | Msa0293770:CDS | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | - | chr2_3:45258403-45258422 | None:intergenic | 45.0% | |
| TGTCTTCTGCAGCATCAACT+TGG | - | chr2_3:45258403-45258422 | None:intergenic | 45.0% | |
| ATTTGTGCTCTGTACAGCCA+TGG | + | chr2_3:45259033-45259052 | Msa0293770:intron | 45.0% | |
| AGCCACTTAAAGTCCGAAGT+AGG | - | chr2_3:45259648-45259667 | None:intergenic | 45.0% | |
| !! | CTATGCATTGGTCTTCAGCT+TGG | + | chr2_3:45259687-45259706 | Msa0293770:intron | 45.0% |
| ! | GTGAGGTCACATTTTACAGC+TGG | + | chr2_3:45259710-45259729 | Msa0293770:CDS | 45.0% |
| ATCCCAACAGTCAGCTTATG+CGG | + | chr2_3:45259906-45259925 | Msa0293770:CDS | 45.0% | |
| GATCTTCAAACCTTGGGGAA+AGG | - | chr2_3:45260156-45260175 | None:intergenic | 45.0% | |
| TGTCGTATGTTTGAGAACCG+GGG | + | chr2_3:45260238-45260257 | Msa0293770:CDS | 45.0% | |
| TGTTCTTGAGGCAGGGAAAA+AGG | + | chr2_3:45260528-45260547 | Msa0293770:CDS | 45.0% | |
| CTGTCTGTGAACCATCTGTT+GGG | + | chr2_3:45260629-45260648 | Msa0293770:CDS | 45.0% | |
| CTCAAGTAGCGCAAATGCTC+TGG | - | chr2_3:45258125-45258144 | None:intergenic | 50.0% | |
| !! | GAAGTGATGGGTCAAGGAGT+TGG | + | chr2_3:45258227-45258246 | Msa0293770:CDS | 50.0% |
| ACCATATACACAGACCAGGC+TGG | + | chr2_3:45259411-45259430 | Msa0293770:intron | 50.0% | |
| ACCAGCCTGGTCTGTGTATA+TGG | - | chr2_3:45259415-45259434 | None:intergenic | 50.0% | |
| TGGTCTTTGCTCATGGCACA+TGG | + | chr2_3:45259479-45259498 | Msa0293770:intron | 50.0% | |
| GGTCTTTGCTCATGGCACAT+GGG | + | chr2_3:45259480-45259499 | Msa0293770:intron | 50.0% | |
| GGCCTACTTCGGACTTTAAG+TGG | + | chr2_3:45259643-45259662 | Msa0293770:intron | 50.0% | |
| !! | ATTGGTCTTCAGCTTGGGTG+AGG | + | chr2_3:45259693-45259712 | Msa0293770:intron | 50.0% |
| GACCGCATAAGCTGACTGTT+GGG | - | chr2_3:45259911-45259930 | None:intergenic | 50.0% | |
| GGGTTGTCACAGTCGACATT+AGG | + | chr2_3:45260194-45260213 | Msa0293770:CDS | 50.0% | |
| CATGTCGACATAAGGAACCC+CGG | - | chr2_3:45260258-45260277 | None:intergenic | 50.0% | |
| TACACGTGTTTGCGCAGATG+CGG | + | chr2_3:45260480-45260499 | Msa0293770:CDS | 50.0% | |
| TCAACGGTGTTCTTGAGGCA+GGG | + | chr2_3:45260521-45260540 | Msa0293770:CDS | 50.0% | |
| GCTGTCTGTGAACCATCTGT+TGG | + | chr2_3:45260628-45260647 | Msa0293770:CDS | 50.0% | |
| ! | TTTGGTGCAGTCCCAACAGA+TGG | - | chr2_3:45260643-45260662 | None:intergenic | 50.0% |
| !! | GTGATGGGTCAAGGAGTTGG+AGG | + | chr2_3:45258230-45258249 | Msa0293770:CDS | 55.0% |
| ! | CGTCAAAAGGAGATGGTGGC+TGG | + | chr2_3:45258308-45258327 | Msa0293770:CDS | 55.0% |
| ACTTCAACAACGCACCAGCC+TGG | - | chr2_3:45259428-45259447 | None:intergenic | 55.0% | |
| GGACCGCATAAGCTGACTGT+TGG | - | chr2_3:45259912-45259931 | None:intergenic | 55.0% | |
| CTCAACGGTGTTCTTGAGGC+AGG | + | chr2_3:45260520-45260539 | Msa0293770:CDS | 55.0% | |
| TGAGGCAGGGAAAAAGGCAG+AGG | + | chr2_3:45260534-45260553 | Msa0293770:CDS | 55.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | chr2_3:45258235-45258254 | Msa0293770:CDS | 60.0% | |
| ACGTGTTTGCGCAGATGCGG+AGG | + | chr2_3:45260483-45260502 | Msa0293770:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 45257606 | 45261237 | 45257606 | ID=Msa0293770;Name=Msa0293770 |
| chr2_3 | mRNA | 45257606 | 45261237 | 45257606 | ID=Msa0293770-mRNA-1;Parent=Msa0293770;Name=Msa0293770-mRNA-1;_AED=0.14;_eAED=0.16;_QI=45|0|0.25|0.75|1|1|4|0|704 |
| chr2_3 | exon | 45257606 | 45258533 | 45257606 | ID=Msa0293770-mRNA-1:exon:14113;Parent=Msa0293770-mRNA-1 |
| chr2_3 | exon | 45258687 | 45258836 | 45258687 | ID=Msa0293770-mRNA-1:exon:14114;Parent=Msa0293770-mRNA-1 |
| chr2_3 | exon | 45259705 | 45260709 | 45259705 | ID=Msa0293770-mRNA-1:exon:14115;Parent=Msa0293770-mRNA-1 |
| chr2_3 | exon | 45261161 | 45261237 | 45261161 | ID=Msa0293770-mRNA-1:exon:14116;Parent=Msa0293770-mRNA-1 |
| chr2_3 | five_prime_UTR | 45257606 | 45257650 | 45257606 | ID=Msa0293770-mRNA-1:five_prime_utr;Parent=Msa0293770-mRNA-1 |
| chr2_3 | CDS | 45257651 | 45258533 | 45257651 | ID=Msa0293770-mRNA-1:cds;Parent=Msa0293770-mRNA-1 |
| chr2_3 | CDS | 45258687 | 45258836 | 45258687 | ID=Msa0293770-mRNA-1:cds;Parent=Msa0293770-mRNA-1 |
| chr2_3 | CDS | 45259705 | 45260709 | 45259705 | ID=Msa0293770-mRNA-1:cds;Parent=Msa0293770-mRNA-1 |
| chr2_3 | CDS | 45261161 | 45261237 | 45261161 | ID=Msa0293770-mRNA-1:cds;Parent=Msa0293770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
