Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297310 | XP_013464879.1 | 93.135 | 539 | 13 | 4 | 1 | 515 | 1 | 539 | 0.0 | 1017 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297310 | sp|P36616|DSK1_SCHPO | 41.545 | 479 | 226 | 10 | 13 | 453 | 54 | 516 | 1.56e-115 | 355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297310 | A0A072VA73 | 93.135 | 539 | 13 | 4 | 1 | 515 | 1 | 539 | 0.0 | 1017 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297310 | MtrunA17_Chr2g0320631 | 93.135 | 539 | 13 | 4 | 1 | 515 | 1 | 539 | 0.0 | 1017 |
| Msa0297310 | MtrunA17_Chr4g0027671 | 72.626 | 537 | 114 | 8 | 9 | 514 | 8 | 542 | 0.0 | 767 |
| Msa0297310 | MtrunA17_Chr1g0179611 | 65.537 | 531 | 142 | 9 | 7 | 505 | 11 | 532 | 0.0 | 704 |
| Msa0297310 | MtrunA17_Chr5g0407121 | 46.108 | 501 | 174 | 7 | 19 | 498 | 17 | 442 | 1.20e-152 | 443 |
| Msa0297310 | MtrunA17_Chr8g0370321 | 45.600 | 500 | 174 | 7 | 19 | 498 | 17 | 438 | 2.24e-149 | 434 |
| Msa0297310 | MtrunA17_Chr4g0058241 | 37.975 | 158 | 89 | 5 | 25 | 180 | 84 | 234 | 1.66e-25 | 108 |
| Msa0297310 | MtrunA17_Chr3g0116701 | 37.580 | 157 | 89 | 5 | 25 | 179 | 80 | 229 | 3.31e-24 | 105 |
| Msa0297310 | MtrunA17_Chr3g0139371 | 35.393 | 178 | 100 | 6 | 4 | 179 | 45 | 209 | 2.91e-23 | 102 |
| Msa0297310 | MtrunA17_Chr3g0139371 | 28.736 | 174 | 79 | 6 | 312 | 453 | 238 | 398 | 3.46e-12 | 68.2 |
| Msa0297310 | MtrunA17_Chr3g0123491 | 33.544 | 158 | 96 | 5 | 25 | 180 | 79 | 229 | 1.06e-21 | 97.4 |
| Msa0297310 | MtrunA17_Chr8g0369241 | 37.762 | 143 | 81 | 4 | 40 | 179 | 139 | 276 | 7.24e-20 | 93.6 |
| Msa0297310 | MtrunA17_Chr1g0210061 | 32.298 | 161 | 94 | 6 | 25 | 177 | 596 | 749 | 8.89e-15 | 77.4 |
| Msa0297310 | MtrunA17_Chr5g0437131 | 37.162 | 148 | 82 | 4 | 38 | 179 | 401 | 543 | 2.20e-13 | 72.8 |
| Msa0297310 | MtrunA17_Chr6g0480541 | 34.459 | 148 | 86 | 4 | 38 | 179 | 896 | 1038 | 2.23e-13 | 73.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0297310 | AT3G53030.1 | 66.219 | 521 | 127 | 9 | 7 | 498 | 9 | 509 | 0.0 | 681 |
| Msa0297310 | AT5G22840.1 | 66.095 | 525 | 136 | 8 | 7 | 503 | 12 | 522 | 0.0 | 671 |
| Msa0297310 | AT3G44850.1 | 66.853 | 537 | 136 | 10 | 1 | 501 | 1 | 531 | 0.0 | 661 |
| Msa0297310 | AT4G35500.1 | 46.822 | 472 | 172 | 6 | 21 | 468 | 19 | 435 | 5.01e-149 | 434 |
| Msa0297310 | AT4G35500.2 | 44.820 | 473 | 181 | 7 | 21 | 468 | 19 | 436 | 1.28e-139 | 410 |
| Msa0297310 | AT2G17530.2 | 60.526 | 190 | 72 | 2 | 21 | 208 | 19 | 207 | 1.59e-76 | 245 |
| Msa0297310 | AT2G17530.2 | 39.375 | 160 | 69 | 4 | 249 | 380 | 183 | 342 | 2.93e-25 | 107 |
| Msa0297310 | AT2G17530.1 | 60.526 | 190 | 72 | 2 | 21 | 208 | 19 | 207 | 3.19e-75 | 244 |
| Msa0297310 | AT2G17530.1 | 40.214 | 281 | 115 | 5 | 249 | 501 | 183 | 438 | 2.60e-62 | 210 |
| Msa0297310 | AT2G17530.3 | 60.526 | 190 | 72 | 2 | 21 | 208 | 19 | 207 | 3.19e-75 | 244 |
| Msa0297310 | AT2G17530.3 | 40.214 | 281 | 115 | 5 | 249 | 501 | 183 | 438 | 2.60e-62 | 210 |
| Msa0297310 | AT4G24740.4 | 37.791 | 172 | 97 | 6 | 25 | 194 | 84 | 247 | 2.50e-25 | 106 |
| Msa0297310 | AT4G24740.3 | 37.791 | 172 | 97 | 6 | 25 | 194 | 84 | 247 | 4.36e-25 | 106 |
| Msa0297310 | AT4G24740.7 | 37.791 | 172 | 97 | 6 | 25 | 194 | 46 | 209 | 7.10e-25 | 107 |
| Msa0297310 | AT4G24740.1 | 37.791 | 172 | 97 | 6 | 25 | 194 | 84 | 247 | 8.37e-25 | 107 |
| Msa0297310 | AT4G32660.3 | 37.107 | 159 | 91 | 4 | 23 | 179 | 47 | 198 | 3.30e-23 | 102 |
| Msa0297310 | AT4G32660.2 | 37.107 | 159 | 91 | 5 | 23 | 179 | 55 | 206 | 3.50e-23 | 101 |
| Msa0297310 | AT4G32660.1 | 37.107 | 159 | 91 | 4 | 23 | 179 | 55 | 206 | 3.96e-23 | 102 |
| Msa0297310 | AT3G53570.1 | 37.580 | 157 | 89 | 5 | 25 | 179 | 101 | 250 | 9.65e-23 | 101 |
| Msa0297310 | AT3G53570.4 | 37.580 | 157 | 89 | 5 | 25 | 179 | 101 | 250 | 9.65e-23 | 101 |
| Msa0297310 | AT3G53570.2 | 37.580 | 157 | 89 | 5 | 25 | 179 | 101 | 250 | 9.65e-23 | 101 |
| Msa0297310 | AT4G24740.5 | 39.073 | 151 | 83 | 5 | 46 | 194 | 1 | 144 | 1.11e-22 | 97.4 |
| Msa0297310 | AT3G53570.3 | 37.580 | 157 | 89 | 5 | 25 | 179 | 87 | 236 | 1.27e-22 | 100 |
| Msa0297310 | AT3G53570.5 | 37.580 | 157 | 89 | 5 | 25 | 179 | 87 | 236 | 1.27e-22 | 100 |
| Msa0297310 | AT4G24740.6 | 39.073 | 151 | 83 | 5 | 46 | 194 | 1 | 144 | 2.43e-22 | 98.2 |
| Msa0297310 | AT4G24740.9 | 39.073 | 151 | 83 | 5 | 46 | 194 | 1 | 144 | 2.43e-22 | 98.2 |
| Msa0297310 | AT4G24740.2 | 39.073 | 151 | 83 | 5 | 46 | 194 | 1 | 144 | 2.43e-22 | 98.2 |
| Msa0297310 | AT5G35980.1 | 37.584 | 149 | 85 | 4 | 40 | 185 | 122 | 265 | 5.48e-21 | 97.4 |
| Msa0297310 | AT5G35980.3 | 37.584 | 149 | 85 | 4 | 40 | 185 | 87 | 230 | 5.96e-21 | 97.4 |
| Msa0297310 | AT5G35980.2 | 37.584 | 149 | 85 | 4 | 40 | 185 | 122 | 265 | 1.09e-20 | 96.3 |
| Msa0297310 | AT1G13350.1 | 33.125 | 160 | 94 | 5 | 25 | 177 | 428 | 581 | 1.40e-15 | 80.5 |
| Msa0297310 | AT1G13350.2 | 33.125 | 160 | 94 | 5 | 25 | 177 | 455 | 608 | 1.89e-15 | 80.1 |
| Msa0297310 | AT3G25840.1 | 31.875 | 160 | 96 | 5 | 25 | 177 | 603 | 756 | 2.15e-15 | 79.7 |
| Msa0297310 | AT1G13350.3 | 33.125 | 160 | 94 | 5 | 25 | 177 | 501 | 654 | 3.93e-15 | 79.0 |
| Msa0297310 | AT3G25840.2 | 31.875 | 160 | 96 | 5 | 25 | 177 | 341 | 494 | 6.94e-15 | 78.2 |
| Msa0297310 | AT1G73460.2 | 33.784 | 148 | 87 | 4 | 38 | 179 | 856 | 998 | 1.04e-12 | 71.6 |
| Msa0297310 | AT1G73460.2 | 28.652 | 178 | 95 | 7 | 301 | 454 | 992 | 1161 | 3.93e-12 | 69.7 |
| Msa0297310 | AT1G73460.1 | 33.784 | 148 | 87 | 4 | 38 | 179 | 856 | 998 | 1.04e-12 | 71.6 |
| Msa0297310 | AT1G73460.1 | 28.652 | 178 | 95 | 7 | 301 | 454 | 992 | 1161 | 3.93e-12 | 69.7 |
| Msa0297310 | AT3G53640.1 | 31.250 | 160 | 97 | 5 | 25 | 177 | 309 | 462 | 1.04e-12 | 71.2 |
| Msa0297310 | AT1G73450.1 | 33.784 | 148 | 87 | 4 | 38 | 179 | 839 | 981 | 1.11e-12 | 71.2 |
| Msa0297310 | AT1G73450.1 | 28.652 | 178 | 95 | 7 | 301 | 454 | 975 | 1144 | 3.82e-12 | 69.7 |
| Msa0297310 | AT4G32660.4 | 38.000 | 100 | 54 | 3 | 82 | 179 | 1 | 94 | 1.78e-12 | 68.6 |
| Msa0297310 | AT3G17750.1 | 33.784 | 148 | 87 | 4 | 38 | 179 | 825 | 967 | 2.81e-12 | 70.1 |
| Msa0297310 | AT2G40120.1 | 33.548 | 155 | 92 | 4 | 31 | 179 | 252 | 401 | 8.80e-12 | 68.2 |
| Msa0297310 | AT2G40120.1 | 29.518 | 166 | 89 | 6 | 312 | 456 | 408 | 566 | 1.55e-11 | 67.4 |
Find 161 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCAGTGAATGGGAAAATT+AGG | 0.138672 | 2_3:-50996041 | None:intergenic |
| CTCTTGGCGGCCGCTATTCC+CGG | 0.220901 | 2_3:+51000628 | Msa0297310:CDS |
| TCTTTACTTGTGGGACTATT+AGG | 0.223443 | 2_3:-50997891 | None:intergenic |
| AAGTGCAAGCTTGTGGATTT+TGG | 0.224760 | 2_3:+50998020 | Msa0297310:CDS |
| CATTGATGATGGAGCTTCTT+GGG | 0.233630 | 2_3:+51000316 | Msa0297310:CDS |
| TGGAAATCTTTGAGTGTCTT+TGG | 0.244986 | 2_3:-51000990 | None:intergenic |
| TTGGACCACTTTAAGCATTC+AGG | 0.246674 | 2_3:+50997390 | Msa0297310:CDS |
| AGAAATTTGCTACCATGTTT+TGG | 0.273662 | 2_3:+50997518 | Msa0297310:CDS |
| GCATTGATGATGGAGCTTCT+TGG | 0.277074 | 2_3:+51000315 | Msa0297310:CDS |
| ACATTCGCCGGTTGCGGTTC+TGG | 0.294454 | 2_3:+51000682 | Msa0297310:CDS |
| GGAGGCTGTGGAAGTTAGTA+TGG | 0.298166 | 2_3:+51000944 | Msa0297310:CDS |
| TTTCAACTGTTTGGCTCGCT+TGG | 0.308825 | 2_3:+50996359 | Msa0297310:CDS |
| GGATCTTTAGATGGATCTAT+TGG | 0.324147 | 2_3:-50997618 | None:intergenic |
| AGCAATGACTTCTGAAACTA+AGG | 0.331800 | 2_3:+50997920 | Msa0297310:CDS |
| CACAAGGAAGTCAGGTTTCT+AGG | 0.332484 | 2_3:+50997949 | Msa0297310:CDS |
| GGGTCATACTTAAGAGGTTA+TGG | 0.335126 | 2_3:+51001146 | Msa0297310:three_prime_UTR |
| ACTCCTAAAATATAACATTA+TGG | 0.337974 | 2_3:-51001384 | None:intergenic |
| TTCAGTGAATGGGAAAATTA+GGG | 0.339771 | 2_3:-50996040 | None:intergenic |
| TGGCATAACTCCATTGTAAT+AGG | 0.342783 | 2_3:-51001215 | None:intergenic |
| CGCTTGGGATACTCTCAAAT+TGG | 0.345638 | 2_3:+50996375 | Msa0297310:CDS |
| GTGAAACCAATTGTAGAAAA+TGG | 0.359586 | 2_3:+50997858 | Msa0297310:CDS |
| TCTAAAGATCCTAGAAAATC+AGG | 0.368774 | 2_3:+50997630 | Msa0297310:CDS |
| GCTGATTCATCTTTACTTGT+GGG | 0.369166 | 2_3:-50997900 | None:intergenic |
| GCGGTTCTGGCCTATTACTA+AGG | 0.369946 | 2_3:+51000695 | Msa0297310:CDS |
| TGTTCAGAGTAAGCTTGGTT+GGG | 0.371537 | 2_3:+50996330 | Msa0297310:CDS |
| TGAATCTATTTGAAGAATAA+TGG | 0.374054 | 2_3:-50996118 | None:intergenic |
| TTACTACAATCATCTTGTTC+AGG | 0.376415 | 2_3:-50997831 | None:intergenic |
| GGATGATGAGCATCTAATCT+AGG | 0.385887 | 2_3:-51001363 | None:intergenic |
| ATCCATGCTGATGCTATTAA+CGG | 0.392213 | 2_3:+51000885 | Msa0297310:CDS |
| TGGTTTGAGAAACCCTTCAT+AGG | 0.394006 | 2_3:+51001166 | Msa0297310:three_prime_UTR |
| GAAATGTGTTGTGAAGCTTT+TGG | 0.397383 | 2_3:+50997371 | Msa0297310:CDS |
| TAATGGTCAGCATGTTTGTA+TGG | 0.402029 | 2_3:+50997416 | Msa0297310:CDS |
| ATTTACTCTTCAGGATCATC+TGG | 0.402061 | 2_3:+51000293 | Msa0297310:intron |
| TTTAAGCATTCAGGGCCTAA+TGG | 0.407435 | 2_3:+50997399 | Msa0297310:CDS |
| TTCAACTGTTTGGCTCGCTT+GGG | 0.408495 | 2_3:+50996360 | Msa0297310:CDS |
| TTATAAGCATTATGTGCAAA+TGG | 0.411340 | 2_3:+51001125 | Msa0297310:three_prime_UTR |
| AGAATCCTCCTCTGCTGCCT+CGG | 0.415247 | 2_3:-50997802 | None:intergenic |
| GAGAAAAGCCTGGAAAGTTA+AGG | 0.417273 | 2_3:+51000907 | Msa0297310:CDS |
| GGATACAGTCTTGACTTTAG+TGG | 0.417337 | 2_3:-50997673 | None:intergenic |
| TGAGACACATTCGCCGGTTG+CGG | 0.421836 | 2_3:+51000676 | Msa0297310:CDS |
| TGCTGATTCATCTTTACTTG+TGG | 0.423615 | 2_3:-50997901 | None:intergenic |
| TGGACCACTTTAAGCATTCA+GGG | 0.426302 | 2_3:+50997391 | Msa0297310:CDS |
| TCTCTTGCCCTACCCTATGA+AGG | 0.427728 | 2_3:-51001179 | None:intergenic |
| ATTGGGTTGGAGTGAGATTG+AGG | 0.428449 | 2_3:-50996080 | None:intergenic |
| ATTAAGCTTCAAACTAGTAT+TGG | 0.429527 | 2_3:-50996173 | None:intergenic |
| TCCGTCAAAACCTTAGTAAT+AGG | 0.434151 | 2_3:-51000705 | None:intergenic |
| ATGGGGAATATGACCATTGA+TGG | 0.439672 | 2_3:+51000963 | Msa0297310:CDS |
| TTGTTCAGAGTAAGCTTGGT+TGG | 0.440447 | 2_3:+50996329 | Msa0297310:CDS |
| GCTTAATCCTTCGACTTCAA+TGG | 0.441539 | 2_3:+50996189 | Msa0297310:exon |
| TTCTTGTAAAAGTGTGTAGA+AGG | 0.444333 | 2_3:+51001248 | Msa0297310:three_prime_UTR |
| TGGTGGTGGATGAGAAAGAT+TGG | 0.445967 | 2_3:-50996098 | None:intergenic |
| GGATGTTCCACAAGGAAGTC+AGG | 0.451642 | 2_3:+50997941 | Msa0297310:CDS |
| TAGGGTAGGGCAAGAGAAGC+TGG | 0.453382 | 2_3:+51001185 | Msa0297310:three_prime_UTR |
| TTTCCCATTCACTGAATTCG+AGG | 0.463468 | 2_3:+50996047 | Msa0297310:five_prime_UTR |
| GAATCCTCCTCTGCTGCCTC+GGG | 0.466324 | 2_3:-50997801 | None:intergenic |
| AGAAAAGCCTGGAAAGTTAA+GGG | 0.469505 | 2_3:+51000908 | Msa0297310:CDS |
| TTGGGTTGGAGTGAGATTGA+GGG | 0.469888 | 2_3:-50996079 | None:intergenic |
| GTTCAGAGTAAGCTTGGTTG+GGG | 0.478128 | 2_3:+50996331 | Msa0297310:CDS |
| TCTTGGCGGCCGCTATTCCC+GGG | 0.484079 | 2_3:+51000629 | Msa0297310:CDS |
| CTCAGTGTCTTACTCATCCA+TGG | 0.484235 | 2_3:+51000820 | Msa0297310:CDS |
| TCAAGACTGTATCCAAGAAC+GGG | 0.487936 | 2_3:+50997682 | Msa0297310:intron |
| GGATCATCTGGCATTGATGA+TGG | 0.488648 | 2_3:+51000305 | Msa0297310:intron |
| TTGGAGTGAGATTGAGGGAA+AGG | 0.490176 | 2_3:-50996074 | None:intergenic |
| ATACAAACATGCTGACCATT+AGG | 0.491084 | 2_3:-50997414 | None:intergenic |
| GTAGCAAATTTCTTTGACCA+TGG | 0.492513 | 2_3:-50997508 | None:intergenic |
| ATATGCTTTGAGCTTGCCAC+TGG | 0.494568 | 2_3:+50998164 | Msa0297310:CDS |
| CTCTTGCCCTACCCTATGAA+GGG | 0.496347 | 2_3:-51001178 | None:intergenic |
| TATGTTGTTCAGAGTAAGCT+TGG | 0.499567 | 2_3:+50996325 | Msa0297310:CDS |
| TATAAGCATTATGTGCAAAT+GGG | 0.501452 | 2_3:+51001126 | Msa0297310:three_prime_UTR |
| GGAAAGTCCCGAGGCAGCAG+AGG | 0.502003 | 2_3:+50997794 | Msa0297310:CDS |
| GCTATTAACGGAGAAAAGCC+TGG | 0.503727 | 2_3:+51000897 | Msa0297310:CDS |
| TAATAGGCCAGAACCGCAAC+CGG | 0.505990 | 2_3:-51000689 | None:intergenic |
| AAAACCTCGAATTCAGTGAA+TGG | 0.506638 | 2_3:-50996051 | None:intergenic |
| AAACCTCGAATTCAGTGAAT+GGG | 0.509572 | 2_3:-50996050 | None:intergenic |
| GCAAATGGGTCATACTTAAG+AGG | 0.513458 | 2_3:+51001140 | Msa0297310:three_prime_UTR |
| TTTGTTCAGATTGCTCTTGG+CGG | 0.517367 | 2_3:+51000615 | Msa0297310:intron |
| AAAGAACGAGCAGGAGGCTG+TGG | 0.520764 | 2_3:+51000932 | Msa0297310:CDS |
| AATTTCTTTGACCATGGGAA+GGG | 0.522927 | 2_3:-50997502 | None:intergenic |
| GGTTATCATGCGGTTCAGAT+TGG | 0.523054 | 2_3:+50996280 | Msa0297310:CDS |
| GAGAAACCCTTCATAGGGTA+GGG | 0.526215 | 2_3:+51001172 | Msa0297310:three_prime_UTR |
| TTAGTGGTTGGAAGTATAAG+TGG | 0.528613 | 2_3:-50997657 | None:intergenic |
| ATTTCTTTGACCATGGGAAG+GGG | 0.529053 | 2_3:-50997501 | None:intergenic |
| GATGATGAGCATCTAATCTA+GGG | 0.529346 | 2_3:-51001362 | None:intergenic |
| GCACTACACGGAAGCGGCAA+TGG | 0.529430 | 2_3:+50997299 | Msa0297310:CDS |
| TCTCAAACAAATTGCTGAAG+GGG | 0.530198 | 2_3:+50997335 | Msa0297310:CDS |
| AAGTCCCGAGGCAGCAGAGG+AGG | 0.531648 | 2_3:+50997797 | Msa0297310:CDS |
| AAACATGATAAAAGCTCGAA+TGG | 0.532947 | 2_3:+50997711 | Msa0297310:CDS |
| CGAGGACCTGCACTCATCCA+TGG | 0.534400 | 2_3:-51000837 | None:intergenic |
| CAAAGTCAAGTAACGGAACA+AGG | 0.536228 | 2_3:-51000773 | None:intergenic |
| ATTCTCAAACAAATTGCTGA+AGG | 0.536936 | 2_3:+50997333 | Msa0297310:CDS |
| CATGGATGAGTGCAGGTCCT+CGG | 0.537891 | 2_3:+51000838 | Msa0297310:CDS |
| GGTTTGAGAAACCCTTCATA+GGG | 0.544952 | 2_3:+51001167 | Msa0297310:three_prime_UTR |
| TGAGAAACCCTTCATAGGGT+AGG | 0.545723 | 2_3:+51001171 | Msa0297310:three_prime_UTR |
| ACTCGACTCCGGCAGATATG+TGG | 0.548164 | 2_3:+50998129 | Msa0297310:CDS |
| TCCTTCGACTTCAATGGCGG+AGG | 0.550311 | 2_3:+50996195 | Msa0297310:exon |
| TGGATGGAAGCCTATTACAA+TGG | 0.552235 | 2_3:+51001205 | Msa0297310:three_prime_UTR |
| CTCCGTTAATAGCATCAGCA+TGG | 0.557184 | 2_3:-51000887 | None:intergenic |
| ACAGTGGTGATAACTATGAC+AGG | 0.561800 | 2_3:+50998207 | Msa0297310:CDS |
| TTCTCAAACAAATTGCTGAA+GGG | 0.564427 | 2_3:+50997334 | Msa0297310:CDS |
| TGCTCAGCACTACACGGAAG+CGG | 0.566332 | 2_3:+50997293 | Msa0297310:CDS |
| ACTCATCCATGGATGAGTGC+AGG | 0.567258 | 2_3:+51000831 | Msa0297310:CDS |
| AAATTTCTTTGACCATGGGA+AGG | 0.567519 | 2_3:-50997503 | None:intergenic |
| GTCAAGACTGTATCCAAGAA+CGG | 0.569523 | 2_3:+50997681 | Msa0297310:intron |
| GTGGATGAGAAAGATTGGGT+TGG | 0.570002 | 2_3:-50996093 | None:intergenic |
| GTGTAAGAAGATTGTCCCCA+AGG | 0.570530 | 2_3:-50997449 | None:intergenic |
| GTTAAGGGAAAAGAACGAGC+AGG | 0.570911 | 2_3:+51000923 | Msa0297310:CDS |
| TAGCAAATTTCTTTGACCAT+GGG | 0.571005 | 2_3:-50997507 | None:intergenic |
| CCTAATATGCCTACCTTGCG+AGG | 0.572307 | 2_3:-51000345 | None:intergenic |
| GCAAAGGACCACATATCTGC+CGG | 0.573521 | 2_3:-50998137 | None:intergenic |
| GAGGCTGTGGAAGTTAGTAT+GGG | 0.573693 | 2_3:+51000945 | Msa0297310:CDS |
| ATTGATGATGGAGCTTCTTG+GGG | 0.574003 | 2_3:+51000317 | Msa0297310:CDS |
| GGTGGTGGATGAGAAAGATT+GGG | 0.576553 | 2_3:-50996097 | None:intergenic |
| TCGTGGTATTCCCCTTCCCA+TGG | 0.577077 | 2_3:+50997491 | Msa0297310:CDS |
| TTTACAAGAAGTGAAAGAAG+TGG | 0.578789 | 2_3:-51001235 | None:intergenic |
| ACAGTCTTGACTTTAGTGGT+TGG | 0.580495 | 2_3:-50997669 | None:intergenic |
| CTCAAAGCATATGCAAGCAA+AGG | 0.581090 | 2_3:-50998153 | None:intergenic |
| GATTACAGTTCGGAAGATGA+AGG | 0.582493 | 2_3:+50996235 | Msa0297310:CDS |
| TCAGGAACAAAGTCAAGTAA+CGG | 0.586688 | 2_3:-51000780 | None:intergenic |
| AGATGCGAGTGATTACAGTT+CGG | 0.587171 | 2_3:+50996225 | Msa0297310:CDS |
| GCATGGATGCTATTCACTGA+GGG | 0.587196 | 2_3:-51000870 | None:intergenic |
| GTGATTTGAGACACATTCGC+CGG | 0.588620 | 2_3:+51000670 | Msa0297310:CDS |
| TGATCTTAAGTGCAAGCTTG+TGG | 0.588631 | 2_3:+50998013 | Msa0297310:CDS |
| GTAGGGCAAGAGAAGCTGGA+TGG | 0.592297 | 2_3:+51001189 | Msa0297310:three_prime_UTR |
| CCAATGTGCGGCTACTCCGA+TGG | 0.593521 | 2_3:-51001023 | None:intergenic |
| TCTTGGGGTGATGCCTCGCA+AGG | 0.594012 | 2_3:+51000332 | Msa0297310:CDS |
| TGATAACTATGACAGGGATG+AGG | 0.596142 | 2_3:+50998214 | Msa0297310:CDS |
| TTAAGAAACAAAAGATGTAA+CGG | 0.596342 | 2_3:-51001478 | None:intergenic |
| AATTGCTGAAGGGGATCTAG+AGG | 0.602637 | 2_3:+50997344 | Msa0297310:CDS |
| TGTCTTTGGAGATCCATCAA+TGG | 0.602892 | 2_3:-51000976 | None:intergenic |
| GGAAGTCAGGTTTCTAGGAG+AGG | 0.605679 | 2_3:+50997954 | Msa0297310:CDS |
| TAGGCCCTGAATGCTTAAAG+TGG | 0.607415 | 2_3:-50997395 | None:intergenic |
| TTTCCAATCTACAAAACCAT+CGG | 0.609430 | 2_3:+51001007 | Msa0297310:CDS |
| CCATCGGAGTAGCCGCACAT+TGG | 0.611688 | 2_3:+51001023 | Msa0297310:exon |
| TATTTGAAGAATAATGGTGG+TGG | 0.615793 | 2_3:-50996112 | None:intergenic |
| TAGTGGTTGGAAGTATAAGT+GGG | 0.617001 | 2_3:-50997656 | None:intergenic |
| TCCTCCGCCATTGAAGTCGA+AGG | 0.617006 | 2_3:-50996196 | None:intergenic |
| GTAAGACACTGAGCGGCCGT+TGG | 0.620524 | 2_3:-51000810 | None:intergenic |
| CTAGAAACCTGACTTCCTTG+TGG | 0.628911 | 2_3:-50997948 | None:intergenic |
| AATCCAAACCCACCAAAACA+TGG | 0.629227 | 2_3:-50997530 | None:intergenic |
| AGGTTCTAAATACTCGACTC+CGG | 0.631900 | 2_3:+50998118 | Msa0297310:intron |
| TGCATACACAAGCCAATGTG+CGG | 0.632900 | 2_3:-51001035 | None:intergenic |
| TAATCCTTCGACTTCAATGG+CGG | 0.636314 | 2_3:+50996192 | Msa0297310:exon |
| ACATTGAACATCATGCTCCA+AGG | 0.639562 | 2_3:-51001092 | None:intergenic |
| AAGGGAAAAGAACGAGCAGG+AGG | 0.644457 | 2_3:+51000926 | Msa0297310:CDS |
| AGCTCAGAAGGAAAGTCCCG+AGG | 0.651825 | 2_3:+50997785 | Msa0297310:CDS |
| GAAAAGTGCTCAGCACTACA+CGG | 0.656728 | 2_3:+50997287 | Msa0297310:CDS |
| GTGCACTCTATTGAGTGTGA+AGG | 0.658270 | 2_3:-51001277 | None:intergenic |
| ATCTATTTGAAGAATAATGG+TGG | 0.661720 | 2_3:-50996115 | None:intergenic |
| TGTTCCTGAAAAGAGACCAA+CGG | 0.664722 | 2_3:+51000794 | Msa0297310:CDS |
| CAGTGGTGATAACTATGACA+GGG | 0.667534 | 2_3:+50998208 | Msa0297310:CDS |
| CAAACGAGGTGGTTATCATG+CGG | 0.669550 | 2_3:+50996270 | Msa0297310:CDS |
| ACTGAGGGCTCAAGAGTCCG+AGG | 0.672144 | 2_3:-51000855 | None:intergenic |
| TTCGGAAGATGAAGGAACTG+AGG | 0.673927 | 2_3:+50996243 | Msa0297310:CDS |
| ATCAAGTATAGTGATTATCG+TGG | 0.676361 | 2_3:+50997474 | Msa0297310:intron |
| GAAACTAAGGATGTTCCACA+AGG | 0.679404 | 2_3:+50997933 | Msa0297310:CDS |
| AGGCTGTGGAAGTTAGTATG+GGG | 0.683437 | 2_3:+51000946 | Msa0297310:CDS |
| AGCATGGATGCTATTCACTG+AGG | 0.694541 | 2_3:-51000871 | None:intergenic |
| GGAACTGAGGATTACAAACG+AGG | 0.716479 | 2_3:+50996256 | Msa0297310:CDS |
| ACTGAGGATTACAAACGAGG+TGG | 0.729665 | 2_3:+50996259 | Msa0297310:CDS |
| TGGATGAGTAAGACACTGAG+CGG | 0.731118 | 2_3:-51000817 | None:intergenic |
| TCATAGTTATCACCACTGTG+AGG | 0.731898 | 2_3:-50998203 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATTTAAAATAAAAAACAA+TGG | - | chr2_3:50998820-50998839 | None:intergenic | 10.0% |
| !!! | AAAAACTTGAAATTTGAAAT+AGG | - | chr2_3:50996145-50996164 | None:intergenic | 15.0% |
| !! | ATAAATCAAAACAATGAAAA+GGG | - | chr2_3:50996407-50996426 | None:intergenic | 15.0% |
| !! | AATAAATCAAAACAATGAAA+AGG | - | chr2_3:50996408-50996427 | None:intergenic | 15.0% |
| !!! | TTTTCATTGTTTTGATTTAT+TGG | + | chr2_3:50996407-50996426 | Msa0297310:intron | 15.0% |
| !!! | TAATTTTCTCAAATTATTAG+TGG | - | chr2_3:50996889-50996908 | None:intergenic | 15.0% |
| !!! | TGAACTTCAAAATAAATTTT+TGG | + | chr2_3:50998247-50998266 | Msa0297310:intron | 15.0% |
| !! | AAAAATAAGAAACATTTAGA+GGG | + | chr2_3:50998334-50998353 | Msa0297310:intron | 15.0% |
| !!! | AAAAAATACTACTTTTAACT+TGG | + | chr2_3:50999045-50999064 | Msa0297310:intron | 15.0% |
| !!! | TACTTTTCGTTTTTAAATTA+CGG | - | chr2_3:50999688-50999707 | None:intergenic | 15.0% |
| !!! | CCTATACTTTTTTTTTTATT+GGG | + | chr2_3:51000081-51000100 | Msa0297310:intron | 15.0% |
| !!! | CTATACTTTTTTTTTTATTG+GGG | + | chr2_3:51000082-51000101 | Msa0297310:intron | 15.0% |
| !!! | TATACTTTTTTTTTTATTGG+GGG | + | chr2_3:51000083-51000102 | Msa0297310:intron | 15.0% |
| !!! | TTCAATTATTTCTAAGTTAT+TGG | + | chr2_3:51000136-51000155 | Msa0297310:intron | 15.0% |
| !!! | TCAATTATTTCTAAGTTATT+GGG | + | chr2_3:51000137-51000156 | Msa0297310:intron | 15.0% |
| !!! | GAGAATATTTTATTGTTTTT+TGG | + | chr2_3:51001321-51001340 | Msa0297310:three_prime_UTR | 15.0% |
| !! | TGAATCTATTTGAAGAATAA+TGG | - | chr2_3:50996121-50996140 | None:intergenic | 20.0% |
| !!! | TGATTATTGATTATTGAGTT+TGG | + | chr2_3:50996456-50996475 | Msa0297310:intron | 20.0% |
| !! | GTCAAATTGAAACTAATATA+AGG | + | chr2_3:50996623-50996642 | Msa0297310:intron | 20.0% |
| !! | TTGAAACTAATATAAGGATT+AGG | + | chr2_3:50996629-50996648 | Msa0297310:intron | 20.0% |
| !! | TCATATATATTGTGTGTTAT+TGG | + | chr2_3:50997121-50997140 | Msa0297310:intron | 20.0% |
| !!! | TTTATTTTGAAGTTCAAAAC+AGG | - | chr2_3:50998243-50998262 | None:intergenic | 20.0% |
| !! | TTGTTTATATATGTTGTCTT+AGG | + | chr2_3:50998295-50998314 | Msa0297310:intron | 20.0% |
| !! | GAAAAATAAGAAACATTTAG+AGG | + | chr2_3:50998333-50998352 | Msa0297310:intron | 20.0% |
| !!! | ACATTTGTTTGTTAAAAAGT+TGG | + | chr2_3:50998358-50998377 | Msa0297310:intron | 20.0% |
| !!! | AATTCTAAGACAAACTATTT+TGG | - | chr2_3:50998415-50998434 | None:intergenic | 20.0% |
| !!! | AAATAGTTTGTCTTAGAATT+TGG | + | chr2_3:50998415-50998434 | Msa0297310:intron | 20.0% |
| !!! | AATAGTTTGTCTTAGAATTT+GGG | + | chr2_3:50998416-50998435 | Msa0297310:intron | 20.0% |
| !!! | ACACTTATAGACATATTTTT+AGG | + | chr2_3:50998487-50998506 | Msa0297310:intron | 20.0% |
| !! | AAGTTATTAGTAAAAAAACG+TGG | - | chr2_3:50999007-50999026 | None:intergenic | 20.0% |
| !!! | ATAAAGTGAAGACATTTTTT+AGG | + | chr2_3:50999121-50999140 | Msa0297310:intron | 20.0% |
| !! | ATTATATAAACAAACTGACT+AGG | + | chr2_3:50999154-50999173 | Msa0297310:intron | 20.0% |
| !!! | ATATTGAGTTATTTTAGAAG+AGG | + | chr2_3:50999381-50999400 | Msa0297310:intron | 20.0% |
| !!! | GCCTATACTTTTTTTTTTAT+TGG | + | chr2_3:51000080-51000099 | Msa0297310:intron | 20.0% |
| !!! | CCCAATAAAAAAAAAAGTAT+AGG | - | chr2_3:51000084-51000103 | None:intergenic | 20.0% |
| !!! | CAATTATTTCTAAGTTATTG+GGG | + | chr2_3:51000138-51000157 | Msa0297310:intron | 20.0% |
| !!! | AATTATTTCTAAGTTATTGG+GGG | + | chr2_3:51000139-51000158 | Msa0297310:intron | 20.0% |
| !!! | ATCAATATGCAATATTTCTA+AGG | - | chr2_3:51000180-51000199 | None:intergenic | 20.0% |
| !!! | GATTTTAAAATTTACTCTTC+AGG | + | chr2_3:51000284-51000303 | Msa0297310:intron | 20.0% |
| !! | AGGATAATATGTATCTATAA+TGG | - | chr2_3:51000489-51000508 | None:intergenic | 20.0% |
| !!! | AAATAATTGTTCAAGTTTTG+AGG | - | chr2_3:51000597-51000616 | None:intergenic | 20.0% |
| !!! | TTTTATATGGTAAGTTTTGA+TGG | + | chr2_3:51001068-51001087 | Msa0297310:three_prime_UTR | 20.0% |
| !!! | CATCCATAATGTTATATTTT+AGG | + | chr2_3:51001381-51001400 | Msa0297310:three_prime_UTR | 20.0% |
| !! | ACTCCTAAAATATAACATTA+TGG | - | chr2_3:51001387-51001406 | None:intergenic | 20.0% |
| ! | ATCTATTTGAAGAATAATGG+TGG | - | chr2_3:50996118-50996137 | None:intergenic | 25.0% |
| ! | ATTAAGCTTCAAACTAGTAT+TGG | - | chr2_3:50996176-50996195 | None:intergenic | 25.0% |
| !!! | ATTATTGAGTTTGGTGTTTT+TGG | + | chr2_3:50996465-50996484 | Msa0297310:intron | 25.0% |
| !!! | TTATTGAGTTTGGTGTTTTT+GGG | + | chr2_3:50996466-50996485 | Msa0297310:intron | 25.0% |
| !!! | TGCTTTTTTCTTGTTTTCTA+TGG | + | chr2_3:50996540-50996559 | Msa0297310:intron | 25.0% |
| ! | ATTGAAAACTCTACTAACAA+TGG | + | chr2_3:50997223-50997242 | Msa0297310:intron | 25.0% |
| ! | TTGAAAACTCTACTAACAAT+GGG | + | chr2_3:50997224-50997243 | Msa0297310:intron | 25.0% |
| !! | AGCACTTTTCTGAATTTTTA+AGG | - | chr2_3:50997277-50997296 | None:intergenic | 25.0% |
| ! | GGTAAAATTGATAAGTTATG+TGG | + | chr2_3:50998389-50998408 | Msa0297310:intron | 25.0% |
| !! | ATAGTTTGTCTTAGAATTTG+GGG | + | chr2_3:50998417-50998436 | Msa0297310:intron | 25.0% |
| !!! | TCTGATACCATTTTAGAATT+TGG | + | chr2_3:50998621-50998640 | Msa0297310:intron | 25.0% |
| !!! | CTGATACCATTTTAGAATTT+GGG | + | chr2_3:50998622-50998641 | Msa0297310:intron | 25.0% |
| !! | ACTAGTTTGAGATATTAGTA+AGG | + | chr2_3:50998651-50998670 | Msa0297310:intron | 25.0% |
| !! | TTTTTGATCTAGTAAACATG+AGG | + | chr2_3:50998695-50998714 | Msa0297310:intron | 25.0% |
| !! | TTTTGATCTAGTAAACATGA+GGG | + | chr2_3:50998696-50998715 | Msa0297310:intron | 25.0% |
| ! | AATCTAAACACAGTGAATTT+AGG | - | chr2_3:50998782-50998801 | None:intergenic | 25.0% |
| !!! | TTCATGCTTTTGAGTTATAT+AGG | + | chr2_3:50998837-50998856 | Msa0297310:intron | 25.0% |
| !! | CATAAGATACTTTTCCAAAA+GGG | - | chr2_3:50998917-50998936 | None:intergenic | 25.0% |
| !!! | TTGAACTTGTTTTTGTTTCT+TGG | + | chr2_3:50999194-50999213 | Msa0297310:intron | 25.0% |
| ! | AAATTTACTAAAACTCAGAC+TGG | - | chr2_3:50999288-50999307 | None:intergenic | 25.0% |
| !! | GTAAATTTTCACAATCTTTC+TGG | + | chr2_3:50999300-50999319 | Msa0297310:intron | 25.0% |
| ! | CTTTATAACTCAATATATCC+AGG | + | chr2_3:50999548-50999567 | Msa0297310:intron | 25.0% |
| !! | ACATTTTCTTCAAGTATGTA+CGG | + | chr2_3:50999988-51000007 | Msa0297310:intron | 25.0% |
| ! | GAAATAATTGAACTGTACAA+TGG | - | chr2_3:51000128-51000147 | None:intergenic | 25.0% |
| !! | GCAATATTTCTAAGGAAATA+AGG | - | chr2_3:51000172-51000191 | None:intergenic | 25.0% |
| ! | CTTACCATATAAAAAGTAAC+AGG | - | chr2_3:51001062-51001081 | None:intergenic | 25.0% |
| ! | TTATAAGCATTATGTGCAAA+TGG | + | chr2_3:51001125-51001144 | Msa0297310:three_prime_UTR | 25.0% |
| ! | TATAAGCATTATGTGCAAAT+GGG | + | chr2_3:51001126-51001145 | Msa0297310:three_prime_UTR | 25.0% |
| !!! | TTTTTGAGTTGTGTTTGGTT+TGG | - | chr2_3:50996020-50996039 | None:intergenic | 30.0% |
| TTCAGTGAATGGGAAAATTA+GGG | - | chr2_3:50996043-50996062 | None:intergenic | 30.0% | |
| ATTCAGTGAATGGGAAAATT+AGG | - | chr2_3:50996044-50996063 | None:intergenic | 30.0% | |
| TATTTGAAGAATAATGGTGG+TGG | - | chr2_3:50996115-50996134 | None:intergenic | 30.0% | |
| ! | ATTGGTGACACTTTCAAAAA+TGG | + | chr2_3:50996298-50996317 | Msa0297310:CDS | 30.0% |
| ! | TTGGTGACACTTTCAAAAAT+GGG | + | chr2_3:50996299-50996318 | Msa0297310:CDS | 30.0% |
| TTGAATGTAACTACAAGTCT+CGG | + | chr2_3:50996747-50996766 | Msa0297310:intron | 30.0% | |
| TCTCAAATTATTAGTGGTGT+CGG | - | chr2_3:50996883-50996902 | None:intergenic | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr2_3:50996914-50996933 | Msa0297310:intron | 30.0% | |
| GAAACTAGAAAGAGAATCAA+GGG | - | chr2_3:50997089-50997108 | None:intergenic | 30.0% | |
| AGAAACTAGAAAGAGAATCA+AGG | - | chr2_3:50997090-50997109 | None:intergenic | 30.0% | |
| !! | CTCTTTCTAGTTTCTTTAGT+TGG | + | chr2_3:50997095-50997114 | Msa0297310:intron | 30.0% |
| !! | TTTCTAGTTTCTTTAGTTGG+TGG | + | chr2_3:50997098-50997117 | Msa0297310:intron | 30.0% |
| ! | GTTATTGGAGTTCTTTTCAT+TGG | + | chr2_3:50997136-50997155 | Msa0297310:intron | 30.0% |
| TGAAAACTCTACTAACAATG+GGG | + | chr2_3:50997225-50997244 | Msa0297310:intron | 30.0% | |
| ATTCTCAAACAAATTGCTGA+AGG | + | chr2_3:50997333-50997352 | Msa0297310:CDS | 30.0% | |
| TTCTCAAACAAATTGCTGAA+GGG | + | chr2_3:50997334-50997353 | Msa0297310:CDS | 30.0% | |
| ! | TGTATGGTTTTTGAATTCCT+TGG | + | chr2_3:50997432-50997451 | Msa0297310:CDS | 30.0% |
| ! | GTATGGTTTTTGAATTCCTT+GGG | + | chr2_3:50997433-50997452 | Msa0297310:CDS | 30.0% |
| ! | TATGGTTTTTGAATTCCTTG+GGG | + | chr2_3:50997434-50997453 | Msa0297310:CDS | 30.0% |
| ATCAAGTATAGTGATTATCG+TGG | + | chr2_3:50997474-50997493 | Msa0297310:intron | 30.0% | |
| TAGCAAATTTCTTTGACCAT+GGG | - | chr2_3:50997510-50997529 | None:intergenic | 30.0% | |
| !!! | AGAAATTTGCTACCATGTTT+TGG | + | chr2_3:50997518-50997537 | Msa0297310:CDS | 30.0% |
| !!! | GATTTTCTAGGATCTTTAGA+TGG | - | chr2_3:50997630-50997649 | None:intergenic | 30.0% |
| TCTAAAGATCCTAGAAAATC+AGG | + | chr2_3:50997630-50997649 | Msa0297310:CDS | 30.0% | |
| AAACATGATAAAAGCTCGAA+TGG | + | chr2_3:50997711-50997730 | Msa0297310:CDS | 30.0% | |
| TTACTACAATCATCTTGTTC+AGG | - | chr2_3:50997834-50997853 | None:intergenic | 30.0% | |
| GTGAAACCAATTGTAGAAAA+TGG | + | chr2_3:50997858-50997877 | Msa0297310:CDS | 30.0% | |
| TTACAAATGATATCCAGACT+AGG | + | chr2_3:50998069-50998088 | Msa0297310:intron | 30.0% | |
| GTTAAAAAGTTGGATCAAGT+TGG | + | chr2_3:50998368-50998387 | Msa0297310:intron | 30.0% | |
| CTAACTTAACACTACAAAAC+CGG | + | chr2_3:50998442-50998461 | Msa0297310:intron | 30.0% | |
| !!! | ACCATTTTAGAATTTGGGTT+AGG | + | chr2_3:50998627-50998646 | Msa0297310:intron | 30.0% |
| !!! | CCATTTTAGAATTTGGGTTA+GGG | + | chr2_3:50998628-50998647 | Msa0297310:intron | 30.0% |
| GTTTACTAGATCAAAAAGCA+AGG | - | chr2_3:50998692-50998711 | None:intergenic | 30.0% | |
| ! | ATTTCTATCTTTTGCCCTTT+TGG | + | chr2_3:50998900-50998919 | Msa0297310:intron | 30.0% |
| ! | CCATAAGATACTTTTCCAAA+AGG | - | chr2_3:50998918-50998937 | None:intergenic | 30.0% |
| !!! | CCTTTTGGAAAAGTATCTTA+TGG | + | chr2_3:50998915-50998934 | Msa0297310:intron | 30.0% |
| AACACAAGACAATTTCTGAT+TGG | - | chr2_3:50998969-50998988 | None:intergenic | 30.0% | |
| CAGAAATTGTCTTGTGTTAA+TGG | + | chr2_3:50998971-50998990 | Msa0297310:intron | 30.0% | |
| GGTCATTGTGATTTAATCTA+TGG | + | chr2_3:50999066-50999085 | Msa0297310:intron | 30.0% | |
| ! | TGAAAAGCGAAAAGTTTTCA+TGG | - | chr2_3:50999430-50999449 | None:intergenic | 30.0% |
| ACTGTGTATTTCATTCTACA+TGG | - | chr2_3:50999587-50999606 | None:intergenic | 30.0% | |
| GTACTCAGAAAACATACAAT+CGG | - | chr2_3:50999627-50999646 | None:intergenic | 30.0% | |
| CTCTCAATATTATCAAGATC+TGG | + | chr2_3:51000058-51000077 | Msa0297310:intron | 30.0% | |
| ! | TGTATTTCAGACTTTTCAGT+GGG | - | chr2_3:51000219-51000238 | None:intergenic | 30.0% |
| GGAGTAACTGAATAATATGA+GGG | - | chr2_3:51000468-51000487 | None:intergenic | 30.0% | |
| TGGAGTAACTGAATAATATG+AGG | - | chr2_3:51000469-51000488 | None:intergenic | 30.0% | |
| AGAAAGAGAGTAGATACAAT+AGG | - | chr2_3:51000516-51000535 | None:intergenic | 30.0% | |
| ! | TATTTTGTTCAGATTGCTCT+TGG | + | chr2_3:51000612-51000631 | Msa0297310:intron | 30.0% |
| TTTCCAATCTACAAAACCAT+CGG | + | chr2_3:51001007-51001026 | Msa0297310:CDS | 30.0% | |
| !!! | GCAACCTGTTACTTTTTATA+TGG | + | chr2_3:51001055-51001074 | Msa0297310:three_prime_UTR | 30.0% |
| TTTACAAGAAGTGAAAGAAG+TGG | - | chr2_3:51001238-51001257 | None:intergenic | 30.0% | |
| ! | TTCTTGTAAAAGTGTGTAGA+AGG | + | chr2_3:51001248-51001267 | Msa0297310:three_prime_UTR | 30.0% |
| !!! | TTCTTGTTTTTGTTGTTGCC+GGG | - | chr2_3:50995994-50996013 | None:intergenic | 35.0% |
| !!! | CTTCTTGTTTTTGTTGTTGC+CGG | - | chr2_3:50995995-50996014 | None:intergenic | 35.0% |
| !!! | TAGGGTTTTTGAGTTGTGTT+TGG | - | chr2_3:50996025-50996044 | None:intergenic | 35.0% |
| AAACCTCGAATTCAGTGAAT+GGG | - | chr2_3:50996053-50996072 | None:intergenic | 35.0% | |
| AAAACCTCGAATTCAGTGAA+TGG | - | chr2_3:50996054-50996073 | None:intergenic | 35.0% | |
| TATGTTGTTCAGAGTAAGCT+TGG | + | chr2_3:50996325-50996344 | Msa0297310:CDS | 35.0% | |
| !!! | TTGGTGTTTTTGGGTTATGA+AGG | + | chr2_3:50996475-50996494 | Msa0297310:intron | 35.0% |
| !!! | TGGTGTTTTTGGGTTATGAA+GGG | + | chr2_3:50996476-50996495 | Msa0297310:intron | 35.0% |
| TAGGTTGTGTGTGTTTAGTT+TGG | + | chr2_3:50997021-50997040 | Msa0297310:intron | 35.0% | |
| ! | ACTATGTTTGTTGAAAGCCT+AGG | + | chr2_3:50997177-50997196 | Msa0297310:intron | 35.0% |
| TCTCAAACAAATTGCTGAAG+GGG | + | chr2_3:50997335-50997354 | Msa0297310:CDS | 35.0% | |
| ! | GAAATGTGTTGTGAAGCTTT+TGG | + | chr2_3:50997371-50997390 | Msa0297310:CDS | 35.0% |
| ATACAAACATGCTGACCATT+AGG | - | chr2_3:50997417-50997436 | None:intergenic | 35.0% | |
| TAATGGTCAGCATGTTTGTA+TGG | + | chr2_3:50997416-50997435 | Msa0297310:CDS | 35.0% | |
| AATTTCTTTGACCATGGGAA+GGG | - | chr2_3:50997505-50997524 | None:intergenic | 35.0% | |
| AAATTTCTTTGACCATGGGA+AGG | - | chr2_3:50997506-50997525 | None:intergenic | 35.0% | |
| GTAGCAAATTTCTTTGACCA+TGG | - | chr2_3:50997511-50997530 | None:intergenic | 35.0% | |
| !!! | AATTTGCTACCATGTTTTGG+TGG | + | chr2_3:50997521-50997540 | Msa0297310:CDS | 35.0% |
| !!! | ATTTGCTACCATGTTTTGGT+GGG | + | chr2_3:50997522-50997541 | Msa0297310:CDS | 35.0% |
| ! | GAGACAAGCAAAACATTTTC+TGG | - | chr2_3:50997597-50997616 | None:intergenic | 35.0% |
| GGATCTTTAGATGGATCTAT+TGG | - | chr2_3:50997621-50997640 | None:intergenic | 35.0% | |
| ! | TAGTGGTTGGAAGTATAAGT+GGG | - | chr2_3:50997659-50997678 | None:intergenic | 35.0% |
| ! | TTAGTGGTTGGAAGTATAAG+TGG | - | chr2_3:50997660-50997679 | None:intergenic | 35.0% |
| ! | CGAGCTTTTATCATGTTTTG+TGG | - | chr2_3:50997709-50997728 | None:intergenic | 35.0% |
| !!! | CATCTTCTTTTTCTGGTTCT+TGG | - | chr2_3:50997745-50997764 | None:intergenic | 35.0% |
| AGAACCAGAAAAAGAAGATG+CGG | + | chr2_3:50997745-50997764 | Msa0297310:CDS | 35.0% | |
| ! | TTTTCCGCATCTTCTTTTTC+TGG | - | chr2_3:50997752-50997771 | None:intergenic | 35.0% |
| GAAAAAGAAGATGCGGAAAA+AGG | + | chr2_3:50997752-50997771 | Msa0297310:CDS | 35.0% | |
| ! | CCTTCACCATTTTCTACAAT+TGG | - | chr2_3:50997867-50997886 | None:intergenic | 35.0% |
| CCAATTGTAGAAAATGGTGA+AGG | + | chr2_3:50997864-50997883 | Msa0297310:intron | 35.0% | |
| TCTTTACTTGTGGGACTATT+AGG | - | chr2_3:50997894-50997913 | None:intergenic | 35.0% | |
| ! | GCTGATTCATCTTTACTTGT+GGG | - | chr2_3:50997903-50997922 | None:intergenic | 35.0% |
| !! | TGCTGATTCATCTTTACTTG+TGG | - | chr2_3:50997904-50997923 | None:intergenic | 35.0% |
| !! | AGCAATGACTTCTGAAACTA+AGG | + | chr2_3:50997920-50997939 | Msa0297310:CDS | 35.0% |
| !! | TGGATTTTGGAAATGCTTGT+TGG | + | chr2_3:50998033-50998052 | Msa0297310:CDS | 35.0% |
| !! | CGGTTTTGTAGTGTTAAGTT+AGG | - | chr2_3:50998444-50998463 | None:intergenic | 35.0% |
| ! | CCCTAACCCAAATTCTAAAA+TGG | - | chr2_3:50998631-50998650 | None:intergenic | 35.0% |
| GAGATATTAGTAAGGACGTT+AGG | + | chr2_3:50998659-50998678 | Msa0297310:intron | 35.0% | |
| ! | AAACATGAGGGAAGTTTTTG+TGG | + | chr2_3:50998708-50998727 | Msa0297310:intron | 35.0% |
| ! | TGGAAGCTATTTGACTTTGA+TGG | + | chr2_3:50998744-50998763 | Msa0297310:intron | 35.0% |
| ! | GGAAGCTATTTGACTTTGAT+GGG | + | chr2_3:50998745-50998764 | Msa0297310:intron | 35.0% |
| TGGAATATTATGAGCGTGTT+TGG | + | chr2_3:50999214-50999233 | Msa0297310:intron | 35.0% | |
| ATATTATGAGCGTGTTTGGA+AGG | + | chr2_3:50999218-50999237 | Msa0297310:intron | 35.0% | |
| TATTATGAGCGTGTTTGGAA+GGG | + | chr2_3:50999219-50999238 | Msa0297310:intron | 35.0% | |
| ATTTCATTCTACATGGCAGA+AGG | - | chr2_3:50999580-50999599 | None:intergenic | 35.0% | |
| AGTAGTATAGGGAAGTCTAA+GGG | - | chr2_3:50999755-50999774 | None:intergenic | 35.0% | |
| ACCACGATAAAGTTCGTTAT+AGG | + | chr2_3:50999783-50999802 | Msa0297310:intron | 35.0% | |
| ACCTATAACGAACTTTATCG+TGG | - | chr2_3:50999787-50999806 | None:intergenic | 35.0% | |
| ! | ACATGCTTACGTAGCAATTT+TGG | + | chr2_3:50999956-50999975 | Msa0297310:intron | 35.0% |
| ! | CATGCTTACGTAGCAATTTT+GGG | + | chr2_3:50999957-50999976 | Msa0297310:intron | 35.0% |
| ! | ATGCTTACGTAGCAATTTTG+GGG | + | chr2_3:50999958-50999977 | Msa0297310:intron | 35.0% |
| ! | TCTAGAGTAAACCACCAAAT+TGG | + | chr2_3:51000016-51000035 | Msa0297310:intron | 35.0% |
| TACAAAGACATGGACCAATT+TGG | - | chr2_3:51000033-51000052 | None:intergenic | 35.0% | |
| GAGAGTGAATTACAAAGACA+TGG | - | chr2_3:51000043-51000062 | None:intergenic | 35.0% | |
| ! | CTGTATTTCAGACTTTTCAG+TGG | - | chr2_3:51000220-51000239 | None:intergenic | 35.0% |
| ! | AAAAGTCTGAAATACAGCTG+TGG | + | chr2_3:51000223-51000242 | Msa0297310:intron | 35.0% |
| ATTTACTCTTCAGGATCATC+TGG | + | chr2_3:51000293-51000312 | Msa0297310:intron | 35.0% | |
| TTTGCATGTTGATATGCACA+AGG | + | chr2_3:51000406-51000425 | Msa0297310:intron | 35.0% | |
| GAGTAGATACAATAGGATCA+AGG | - | chr2_3:51000509-51000528 | None:intergenic | 35.0% | |
| AGATCTATTGAAAAAGTCCC+GGG | - | chr2_3:51000649-51000668 | None:intergenic | 35.0% | |
| CAGATCTATTGAAAAAGTCC+CGG | - | chr2_3:51000650-51000669 | None:intergenic | 35.0% | |
| !! | GCCTATTACTAAGGTTTTGA+CGG | + | chr2_3:51000704-51000723 | Msa0297310:CDS | 35.0% |
| TCCGTCAAAACCTTAGTAAT+AGG | - | chr2_3:51000708-51000727 | None:intergenic | 35.0% | |
| TCAGGAACAAAGTCAAGTAA+CGG | - | chr2_3:51000783-51000802 | None:intergenic | 35.0% | |
| ATCCATGCTGATGCTATTAA+CGG | + | chr2_3:51000885-51000904 | Msa0297310:CDS | 35.0% | |
| AGAAAAGCCTGGAAAGTTAA+GGG | + | chr2_3:51000908-51000927 | Msa0297310:CDS | 35.0% | |
| ! | TTCTTTTCCCTTAACTTTCC+AGG | - | chr2_3:51000918-51000937 | None:intergenic | 35.0% |
| TGGAAATCTTTGAGTGTCTT+TGG | - | chr2_3:51000993-51001012 | None:intergenic | 35.0% | |
| TGGCATAACTCCATTGTAAT+AGG | - | chr2_3:51001218-51001237 | None:intergenic | 35.0% | |
| GATGATGAGCATCTAATCTA+GGG | - | chr2_3:51001365-51001384 | None:intergenic | 35.0% | |
| TTTCCCATTCACTGAATTCG+AGG | + | chr2_3:50996047-50996066 | Msa0297310:five_prime_UTR | 40.0% | |
| GCTTAATCCTTCGACTTCAA+TGG | + | chr2_3:50996189-50996208 | Msa0297310:exon | 40.0% | |
| TAATCCTTCGACTTCAATGG+CGG | + | chr2_3:50996192-50996211 | Msa0297310:exon | 40.0% | |
| AGATGCGAGTGATTACAGTT+CGG | + | chr2_3:50996225-50996244 | Msa0297310:CDS | 40.0% | |
| GATTACAGTTCGGAAGATGA+AGG | + | chr2_3:50996235-50996254 | Msa0297310:CDS | 40.0% | |
| TTGTTCAGAGTAAGCTTGGT+TGG | + | chr2_3:50996329-50996348 | Msa0297310:CDS | 40.0% | |
| TGTTCAGAGTAAGCTTGGTT+GGG | + | chr2_3:50996330-50996349 | Msa0297310:CDS | 40.0% | |
| !!! | GGGGTCATTTTTCAACTGTT+TGG | + | chr2_3:50996350-50996369 | Msa0297310:CDS | 40.0% |
| ! | ATGATGCACCGACATATACA+CGG | + | chr2_3:50996667-50996686 | Msa0297310:intron | 40.0% |
| CGACATGTCATTGTCATATC+CGG | - | chr2_3:50996696-50996715 | None:intergenic | 40.0% | |
| TATGTAGCACCAATGAAGCA+CGG | - | chr2_3:50997003-50997022 | None:intergenic | 40.0% | |
| ! | TCAGAGCATGTTTGTTACCT+AGG | - | chr2_3:50997197-50997216 | None:intergenic | 40.0% |
| TTGGACCACTTTAAGCATTC+AGG | + | chr2_3:50997390-50997409 | Msa0297310:CDS | 40.0% | |
| TGGACCACTTTAAGCATTCA+GGG | + | chr2_3:50997391-50997410 | Msa0297310:CDS | 40.0% | |
| TTTAAGCATTCAGGGCCTAA+TGG | + | chr2_3:50997399-50997418 | Msa0297310:CDS | 40.0% | |
| ATTTCTTTGACCATGGGAAG+GGG | - | chr2_3:50997504-50997523 | None:intergenic | 40.0% | |
| AATCCAAACCCACCAAAACA+TGG | - | chr2_3:50997533-50997552 | None:intergenic | 40.0% | |
| ACAGTCTTGACTTTAGTGGT+TGG | - | chr2_3:50997672-50997691 | None:intergenic | 40.0% | |
| GGATACAGTCTTGACTTTAG+TGG | - | chr2_3:50997676-50997695 | None:intergenic | 40.0% | |
| GTCAAGACTGTATCCAAGAA+CGG | + | chr2_3:50997681-50997700 | Msa0297310:intron | 40.0% | |
| TCAAGACTGTATCCAAGAAC+GGG | + | chr2_3:50997682-50997701 | Msa0297310:intron | 40.0% | |
| GAAACTAAGGATGTTCCACA+AGG | + | chr2_3:50997933-50997952 | Msa0297310:CDS | 40.0% | |
| TGATCTTAAGTGCAAGCTTG+TGG | + | chr2_3:50998013-50998032 | Msa0297310:CDS | 40.0% | |
| ! | AAGTGCAAGCTTGTGGATTT+TGG | + | chr2_3:50998020-50998039 | Msa0297310:CDS | 40.0% |
| TTAGAACCTAGAAGAACCTC+AGG | - | chr2_3:50998107-50998126 | None:intergenic | 40.0% | |
| !! | AGGTTCTAAATACTCGACTC+CGG | + | chr2_3:50998118-50998137 | Msa0297310:intron | 40.0% |
| CTCAAAGCATATGCAAGCAA+AGG | - | chr2_3:50998156-50998175 | None:intergenic | 40.0% | |
| ATCAAAAAGAACATCGCCAG+TGG | - | chr2_3:50998183-50998202 | None:intergenic | 40.0% | |
| ! | GTTCTTTTTGATCCTCACAG+TGG | + | chr2_3:50998191-50998210 | Msa0297310:CDS | 40.0% |
| TCATAGTTATCACCACTGTG+AGG | - | chr2_3:50998206-50998225 | None:intergenic | 40.0% | |
| ACAGTGGTGATAACTATGAC+AGG | + | chr2_3:50998207-50998226 | Msa0297310:CDS | 40.0% | |
| CAGTGGTGATAACTATGACA+GGG | + | chr2_3:50998208-50998227 | Msa0297310:CDS | 40.0% | |
| TGATAACTATGACAGGGATG+AGG | + | chr2_3:50998214-50998233 | Msa0297310:CDS | 40.0% | |
| !! | TAAAAGTACCACATCGGATG+AGG | - | chr2_3:50998518-50998537 | None:intergenic | 40.0% |
| !! | GGGTGTTAAAAGTACCACAT+CGG | - | chr2_3:50998524-50998543 | None:intergenic | 40.0% |
| !!! | TTTGTGGTGATGGCATGTTT+TGG | + | chr2_3:50998724-50998743 | Msa0297310:intron | 40.0% |
| AACTCAATATATCCAGGCAG+AGG | + | chr2_3:50999554-50999573 | Msa0297310:intron | 40.0% | |
| CAGTAGTATAGGGAAGTCTA+AGG | - | chr2_3:50999756-50999775 | None:intergenic | 40.0% | |
| GGTTTGTCGTCAGTAGTATA+GGG | - | chr2_3:50999766-50999785 | None:intergenic | 40.0% | |
| ! | TGGTTTGTCGTCAGTAGTAT+AGG | - | chr2_3:50999767-50999786 | None:intergenic | 40.0% |
| TTTCGTCTACTCCTTGTTAC+TGG | + | chr2_3:50999835-50999854 | Msa0297310:intron | 40.0% | |
| TACTCCTTGTTACTGGAGAT+AGG | + | chr2_3:50999842-50999861 | Msa0297310:intron | 40.0% | |
| TGTTCCTATCTCCAGTAACA+AGG | - | chr2_3:50999849-50999868 | None:intergenic | 40.0% | |
| GTTACTGGAGATAGGAACAA+AGG | + | chr2_3:50999850-50999869 | Msa0297310:intron | 40.0% | |
| GGAGATAGGAACAAAGGTTA+AGG | + | chr2_3:50999856-50999875 | Msa0297310:intron | 40.0% | |
| AAAGACATGGACCAATTTGG+TGG | - | chr2_3:51000030-51000049 | None:intergenic | 40.0% | |
| !! | CATTGATGATGGAGCTTCTT+GGG | + | chr2_3:51000316-51000335 | Msa0297310:CDS | 40.0% |
| !! | ATTGATGATGGAGCTTCTTG+GGG | + | chr2_3:51000317-51000336 | Msa0297310:CDS | 40.0% |
| TTTGTTCAGATTGCTCTTGG+CGG | + | chr2_3:51000615-51000634 | Msa0297310:intron | 40.0% | |
| !!! | CGGGACTTTTTCAATAGATC+TGG | + | chr2_3:51000648-51000667 | Msa0297310:CDS | 40.0% |
| ! | CAAAGTCAAGTAACGGAACA+AGG | - | chr2_3:51000776-51000795 | None:intergenic | 40.0% |
| TGTTCCTGAAAAGAGACCAA+CGG | + | chr2_3:51000794-51000813 | Msa0297310:CDS | 40.0% | |
| GAGAAAAGCCTGGAAAGTTA+AGG | + | chr2_3:51000907-51000926 | Msa0297310:CDS | 40.0% | |
| ATGGGGAATATGACCATTGA+TGG | + | chr2_3:51000963-51000982 | Msa0297310:CDS | 40.0% | |
| ! | TGTCTTTGGAGATCCATCAA+TGG | - | chr2_3:51000979-51000998 | None:intergenic | 40.0% |
| !!! | ACTCCGATGGTTTTGTAGAT+TGG | - | chr2_3:51001013-51001032 | None:intergenic | 40.0% |
| !! | TGGTAAGTTTTGATGGTCCT+TGG | + | chr2_3:51001075-51001094 | Msa0297310:three_prime_UTR | 40.0% |
| ACATTGAACATCATGCTCCA+AGG | - | chr2_3:51001095-51001114 | None:intergenic | 40.0% | |
| GCAAATGGGTCATACTTAAG+AGG | + | chr2_3:51001140-51001159 | Msa0297310:three_prime_UTR | 40.0% | |
| GGGTCATACTTAAGAGGTTA+TGG | + | chr2_3:51001146-51001165 | Msa0297310:three_prime_UTR | 40.0% | |
| TGGTTTGAGAAACCCTTCAT+AGG | + | chr2_3:51001166-51001185 | Msa0297310:three_prime_UTR | 40.0% | |
| GGTTTGAGAAACCCTTCATA+GGG | + | chr2_3:51001167-51001186 | Msa0297310:three_prime_UTR | 40.0% | |
| TGGATGGAAGCCTATTACAA+TGG | + | chr2_3:51001205-51001224 | Msa0297310:three_prime_UTR | 40.0% | |
| GGATGATGAGCATCTAATCT+AGG | - | chr2_3:51001366-51001385 | None:intergenic | 40.0% | |
| TTGGAGTGAGATTGAGGGAA+AGG | - | chr2_3:50996077-50996096 | None:intergenic | 45.0% | |
| !! | TTGGGTTGGAGTGAGATTGA+GGG | - | chr2_3:50996082-50996101 | None:intergenic | 45.0% |
| !! | ATTGGGTTGGAGTGAGATTG+AGG | - | chr2_3:50996083-50996102 | None:intergenic | 45.0% |
| GTGGATGAGAAAGATTGGGT+TGG | - | chr2_3:50996096-50996115 | None:intergenic | 45.0% | |
| !! | GGTGGTGGATGAGAAAGATT+GGG | - | chr2_3:50996100-50996119 | None:intergenic | 45.0% |
| !! | TGGTGGTGGATGAGAAAGAT+TGG | - | chr2_3:50996101-50996120 | None:intergenic | 45.0% |
| TTCGGAAGATGAAGGAACTG+AGG | + | chr2_3:50996243-50996262 | Msa0297310:CDS | 45.0% | |
| GGAACTGAGGATTACAAACG+AGG | + | chr2_3:50996256-50996275 | Msa0297310:CDS | 45.0% | |
| ACTGAGGATTACAAACGAGG+TGG | + | chr2_3:50996259-50996278 | Msa0297310:CDS | 45.0% | |
| CAAACGAGGTGGTTATCATG+CGG | + | chr2_3:50996270-50996289 | Msa0297310:CDS | 45.0% | |
| GGTTATCATGCGGTTCAGAT+TGG | + | chr2_3:50996280-50996299 | Msa0297310:CDS | 45.0% | |
| GTTCAGAGTAAGCTTGGTTG+GGG | + | chr2_3:50996331-50996350 | Msa0297310:CDS | 45.0% | |
| ! | TTTCAACTGTTTGGCTCGCT+TGG | + | chr2_3:50996359-50996378 | Msa0297310:CDS | 45.0% |
| ! | TTCAACTGTTTGGCTCGCTT+GGG | + | chr2_3:50996360-50996379 | Msa0297310:CDS | 45.0% |
| CGCTTGGGATACTCTCAAAT+TGG | + | chr2_3:50996375-50996394 | Msa0297310:CDS | 45.0% | |
| GACCAATGTCCAACACATGT+CGG | - | chr2_3:50996787-50996806 | None:intergenic | 45.0% | |
| GACATTGGTCACACCTTTGA+TGG | + | chr2_3:50996797-50996816 | Msa0297310:intron | 45.0% | |
| ! | CACACCTTTGATGGAAGTGT+TGG | + | chr2_3:50996806-50996825 | Msa0297310:intron | 45.0% |
| GTGCCTATGAAGCATGGATA+CGG | + | chr2_3:50996828-50996847 | Msa0297310:intron | 45.0% | |
| TGTCCGTATCCATGCTTCAT+AGG | - | chr2_3:50996834-50996853 | None:intergenic | 45.0% | |
| !! | TACAAGTGTCGGTGTTGTGT+CGG | + | chr2_3:50996925-50996944 | Msa0297310:intron | 45.0% |
| !! | GTGCTTCATTGGTGCTACAT+AGG | + | chr2_3:50997002-50997021 | Msa0297310:intron | 45.0% |
| !! | GAAAAGTGCTCAGCACTACA+CGG | + | chr2_3:50997287-50997306 | Msa0297310:CDS | 45.0% |
| AATTGCTGAAGGGGATCTAG+AGG | + | chr2_3:50997344-50997363 | Msa0297310:CDS | 45.0% | |
| TAGGCCCTGAATGCTTAAAG+TGG | - | chr2_3:50997398-50997417 | None:intergenic | 45.0% | |
| GTGTAAGAAGATTGTCCCCA+AGG | - | chr2_3:50997452-50997471 | None:intergenic | 45.0% | |
| !!! | CTACCATGTTTTGGTGGGTT+TGG | + | chr2_3:50997527-50997546 | Msa0297310:CDS | 45.0% |
| ! | AGTGGGACTCCTGATTTTCT+AGG | - | chr2_3:50997642-50997661 | None:intergenic | 45.0% |
| ! | ATGTTTTGTGGTCCCGTTCT+TGG | - | chr2_3:50997697-50997716 | None:intergenic | 45.0% |
| GGCTAAAAAAGCAGCTCAGA+AGG | + | chr2_3:50997773-50997792 | Msa0297310:CDS | 45.0% | |
| CTAGAAACCTGACTTCCTTG+TGG | - | chr2_3:50997951-50997970 | None:intergenic | 45.0% | |
| CACAAGGAAGTCAGGTTTCT+AGG | + | chr2_3:50997949-50997968 | Msa0297310:CDS | 45.0% | |
| GACATCTATACTGCCTAGTC+TGG | - | chr2_3:50998085-50998104 | None:intergenic | 45.0% | |
| TAGGCAGTATAGATGTCCTG+AGG | + | chr2_3:50998088-50998107 | Msa0297310:intron | 45.0% | |
| AGATGTCCTGAGGTTCTTCT+AGG | + | chr2_3:50998098-50998117 | Msa0297310:intron | 45.0% | |
| ! | ATATGCTTTGAGCTTGCCAC+TGG | + | chr2_3:50998164-50998183 | Msa0297310:CDS | 45.0% |
| !! | CACTACAAAACCGGCTTGTA+AGG | + | chr2_3:50998451-50998470 | Msa0297310:intron | 45.0% |
| !! | TACAAAACCGGCTTGTAAGG+TGG | + | chr2_3:50998454-50998473 | Msa0297310:intron | 45.0% |
| !! | ACAAAACCGGCTTGTAAGGT+GGG | + | chr2_3:50998455-50998474 | Msa0297310:intron | 45.0% |
| ! | GAGGGAAGTTTTTGTGGTGA+TGG | + | chr2_3:50998714-50998733 | Msa0297310:intron | 45.0% |
| TGGTTCGTCTAGAAACCTAG+CGG | + | chr2_3:50998935-50998954 | Msa0297310:intron | 45.0% | |
| TGTGTTTGGATGGAGGGTTT+AGG | - | chr2_3:50999732-50999751 | None:intergenic | 45.0% | |
| ! | TAAGGGTGTGTTTGGATGGA+GGG | - | chr2_3:50999738-50999757 | None:intergenic | 45.0% |
| ! | AGTCTAAGGGTGTGTTTGGA+TGG | - | chr2_3:50999742-50999761 | None:intergenic | 45.0% |
| !! | GGATCATCTGGCATTGATGA+TGG | + | chr2_3:51000305-51000324 | Msa0297310:intron | 45.0% |
| !! | GCATTGATGATGGAGCTTCT+TGG | + | chr2_3:51000315-51000334 | Msa0297310:CDS | 45.0% |
| TGAAAAAGTCCCGGGAATAG+CGG | - | chr2_3:51000641-51000660 | None:intergenic | 45.0% | |
| ! | GTGATTTGAGACACATTCGC+CGG | + | chr2_3:51000670-51000689 | Msa0297310:CDS | 45.0% |
| TGGATGAGTAAGACACTGAG+CGG | - | chr2_3:51000820-51000839 | None:intergenic | 45.0% | |
| CTCAGTGTCTTACTCATCCA+TGG | + | chr2_3:51000820-51000839 | Msa0297310:CDS | 45.0% | |
| GCATGGATGCTATTCACTGA+GGG | - | chr2_3:51000873-51000892 | None:intergenic | 45.0% | |
| AGCATGGATGCTATTCACTG+AGG | - | chr2_3:51000874-51000893 | None:intergenic | 45.0% | |
| CTCCGTTAATAGCATCAGCA+TGG | - | chr2_3:51000890-51000909 | None:intergenic | 45.0% | |
| GCTATTAACGGAGAAAAGCC+TGG | + | chr2_3:51000897-51000916 | Msa0297310:CDS | 45.0% | |
| GTTAAGGGAAAAGAACGAGC+AGG | + | chr2_3:51000923-51000942 | Msa0297310:CDS | 45.0% | |
| GAGGCTGTGGAAGTTAGTAT+GGG | + | chr2_3:51000945-51000964 | Msa0297310:CDS | 45.0% | |
| AGGCTGTGGAAGTTAGTATG+GGG | + | chr2_3:51000946-51000965 | Msa0297310:CDS | 45.0% | |
| TGCATACACAAGCCAATGTG+CGG | - | chr2_3:51001038-51001057 | None:intergenic | 45.0% | |
| TGAGAAACCCTTCATAGGGT+AGG | + | chr2_3:51001171-51001190 | Msa0297310:three_prime_UTR | 45.0% | |
| GAGAAACCCTTCATAGGGTA+GGG | + | chr2_3:51001172-51001191 | Msa0297310:three_prime_UTR | 45.0% | |
| GTGCACTCTATTGAGTGTGA+AGG | - | chr2_3:51001280-51001299 | None:intergenic | 45.0% | |
| !!! | ATGTTTTTTAATATAATTTT+TGG | - | chr2_3:50999812-50999831 | None:intergenic | 5.0% |
| ACCGACATATACACGGACAC+CGG | + | chr2_3:50996674-50996693 | Msa0297310:intron | 50.0% | |
| TCCGGTGTCCGTGTATATGT+CGG | - | chr2_3:50996678-50996697 | None:intergenic | 50.0% | |
| TGTCAGAGTCCGACATGTGT+TGG | + | chr2_3:50996775-50996794 | Msa0297310:intron | 50.0% | |
| GTCCGACATGTGTTGGACAT+TGG | + | chr2_3:50996782-50996801 | Msa0297310:intron | 50.0% | |
| GGCACCAACACTTCCATCAA+AGG | - | chr2_3:50996813-50996832 | None:intergenic | 50.0% | |
| ! | GTGTTGGTGCCTATGAAGCA+TGG | + | chr2_3:50996822-50996841 | Msa0297310:intron | 50.0% |
| TGAAGCATGGATACGGACAC+CGG | + | chr2_3:50996835-50996854 | Msa0297310:intron | 50.0% | |
| GATTATGCGTGTCCCAGTGT+TGG | - | chr2_3:50996970-50996989 | None:intergenic | 50.0% | |
| GACACGCATAATCCGAGAAG+TGG | + | chr2_3:50996977-50996996 | Msa0297310:intron | 50.0% | |
| AATGAAGCACGGCCACTTCT+CGG | - | chr2_3:50996992-50997011 | None:intergenic | 50.0% | |
| GGATGTTCCACAAGGAAGTC+AGG | + | chr2_3:50997941-50997960 | Msa0297310:CDS | 50.0% | |
| ! | GGAAGTCAGGTTTCTAGGAG+AGG | + | chr2_3:50997954-50997973 | Msa0297310:CDS | 50.0% |
| GCAAAGGACCACATATCTGC+CGG | - | chr2_3:50998140-50998159 | None:intergenic | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+GGG | + | chr2_3:50998456-50998475 | Msa0297310:intron | 50.0% |
| TCATTCCCCACCTTACAAGC+CGG | - | chr2_3:50998464-50998483 | None:intergenic | 50.0% | |
| GTACCACATCGGATGAGGTA+TGG | - | chr2_3:50998513-50998532 | None:intergenic | 50.0% | |
| TTAACACCCTCCTCGTGTCT+AGG | + | chr2_3:50998535-50998554 | Msa0297310:intron | 50.0% | |
| TTCAGTCCTAGACACGAGGA+GGG | - | chr2_3:50998544-50998563 | None:intergenic | 50.0% | |
| CGTGATGAGTGACTCGATAG+CGG | + | chr2_3:50998573-50998592 | Msa0297310:intron | 50.0% | |
| TGACCCAGCAGATCTCATGT+AGG | + | chr2_3:50998597-50998616 | Msa0297310:intron | 50.0% | |
| GAGCCTACATGAGATCTGCT+GGG | - | chr2_3:50998603-50998622 | None:intergenic | 50.0% | |
| AGAGCCTACATGAGATCTGC+TGG | - | chr2_3:50998604-50998623 | None:intergenic | 50.0% | |
| TGATTGGCAACACTTCCGCT+AGG | - | chr2_3:50998953-50998972 | None:intergenic | 50.0% | |
| TGGAGGGTTTAGGAGGTGAA+GGG | - | chr2_3:50999722-50999741 | None:intergenic | 50.0% | |
| ATGGAGGGTTTAGGAGGTGA+AGG | - | chr2_3:50999723-50999742 | None:intergenic | 50.0% | |
| GTTTGGATGGAGGGTTTAGG+AGG | - | chr2_3:50999729-50999748 | None:intergenic | 50.0% | |
| ! | CTAAGGGTGTGTTTGGATGG+AGG | - | chr2_3:50999739-50999758 | None:intergenic | 50.0% |
| ! | GGGAAGTCTAAGGGTGTGTT+TGG | - | chr2_3:50999746-50999765 | None:intergenic | 50.0% |
| CCTAATATGCCTACCTTGCG+AGG | - | chr2_3:51000348-51000367 | None:intergenic | 50.0% | |
| CCTCGCAAGGTAGGCATATT+AGG | + | chr2_3:51000345-51000364 | Msa0297310:intron | 50.0% | |
| TAATAGGCCAGAACCGCAAC+CGG | - | chr2_3:51000692-51000711 | None:intergenic | 50.0% | |
| ! | GCGGTTCTGGCCTATTACTA+AGG | + | chr2_3:51000695-51000714 | Msa0297310:CDS | 50.0% |
| ACTCATCCATGGATGAGTGC+AGG | + | chr2_3:51000831-51000850 | Msa0297310:CDS | 50.0% | |
| AAGGGAAAAGAACGAGCAGG+AGG | + | chr2_3:51000926-51000945 | Msa0297310:CDS | 50.0% | |
| GGAGGCTGTGGAAGTTAGTA+TGG | + | chr2_3:51000944-51000963 | Msa0297310:CDS | 50.0% | |
| CTCTTGCCCTACCCTATGAA+GGG | - | chr2_3:51001181-51001200 | None:intergenic | 50.0% | |
| TCTCTTGCCCTACCCTATGA+AGG | - | chr2_3:51001182-51001201 | None:intergenic | 50.0% | |
| TCCTTCGACTTCAATGGCGG+AGG | + | chr2_3:50996195-50996214 | Msa0297310:exon | 55.0% | |
| TCCTCCGCCATTGAAGTCGA+AGG | - | chr2_3:50996199-50996218 | None:intergenic | 55.0% | |
| GTCAGTGTCTGTGTCGTGTC+CGG | - | chr2_3:50996857-50996876 | None:intergenic | 55.0% | |
| ACACGACACGTGTCCAACAC+TGG | + | chr2_3:50996954-50996973 | Msa0297310:intron | 55.0% | |
| CACGACACGTGTCCAACACT+GGG | + | chr2_3:50996955-50996974 | Msa0297310:intron | 55.0% | |
| GAGAAGTGGCCGTGCTTCAT+TGG | + | chr2_3:50996991-50997010 | Msa0297310:intron | 55.0% | |
| TGCTCAGCACTACACGGAAG+CGG | + | chr2_3:50997293-50997312 | Msa0297310:CDS | 55.0% | |
| TCGTGGTATTCCCCTTCCCA+TGG | + | chr2_3:50997491-50997510 | Msa0297310:CDS | 55.0% | |
| AGCTCAGAAGGAAAGTCCCG+AGG | + | chr2_3:50997785-50997804 | Msa0297310:CDS | 55.0% | |
| AGAATCCTCCTCTGCTGCCT+CGG | - | chr2_3:50997805-50997824 | None:intergenic | 55.0% | |
| ACTCGACTCCGGCAGATATG+TGG | + | chr2_3:50998129-50998148 | Msa0297310:CDS | 55.0% | |
| AGGCCATACCTCATCCGATG+TGG | + | chr2_3:50998507-50998526 | Msa0297310:intron | 55.0% | |
| GTTCAGTCCTAGACACGAGG+AGG | - | chr2_3:50998545-50998564 | None:intergenic | 55.0% | |
| GGTGTTCAGTCCTAGACACG+AGG | - | chr2_3:50998548-50998567 | None:intergenic | 55.0% | |
| CGAGTCACTCATCACGCTTC+AGG | - | chr2_3:50998569-50998588 | None:intergenic | 55.0% | |
| GGTTTAGGAGGTGAAGGGAG+GGG | - | chr2_3:50999717-50999736 | None:intergenic | 55.0% | |
| GGGTTTAGGAGGTGAAGGGA+GGG | - | chr2_3:50999718-50999737 | None:intergenic | 55.0% | |
| AGGGTTTAGGAGGTGAAGGG+AGG | - | chr2_3:50999719-50999738 | None:intergenic | 55.0% | |
| ! | TGAGACACATTCGCCGGTTG+CGG | + | chr2_3:51000676-51000695 | Msa0297310:CDS | 55.0% |
| CATGGATGAGTGCAGGTCCT+CGG | + | chr2_3:51000838-51000857 | Msa0297310:CDS | 55.0% | |
| AAAGAACGAGCAGGAGGCTG+TGG | + | chr2_3:51000932-51000951 | Msa0297310:CDS | 55.0% | |
| TAGGGTAGGGCAAGAGAAGC+TGG | + | chr2_3:51001185-51001204 | Msa0297310:three_prime_UTR | 55.0% | |
| GTAGGGCAAGAGAAGCTGGA+TGG | + | chr2_3:51001189-51001208 | Msa0297310:three_prime_UTR | 55.0% | |
| GCACTACACGGAAGCGGCAA+TGG | + | chr2_3:50997299-50997318 | Msa0297310:CDS | 60.0% | |
| GAATCCTCCTCTGCTGCCTC+GGG | - | chr2_3:50997804-50997823 | None:intergenic | 60.0% | |
| TAGGAGGTGAAGGGAGGGGA+GGG | - | chr2_3:50999713-50999732 | None:intergenic | 60.0% | |
| TTAGGAGGTGAAGGGAGGGG+AGG | - | chr2_3:50999714-50999733 | None:intergenic | 60.0% | |
| TCTTGGGGTGATGCCTCGCA+AGG | + | chr2_3:51000332-51000351 | Msa0297310:CDS | 60.0% | |
| ! | ACATTCGCCGGTTGCGGTTC+TGG | + | chr2_3:51000682-51000701 | Msa0297310:CDS | 60.0% |
| !! | GCGGCCGTTGGTCTCTTTTC+AGG | - | chr2_3:51000801-51000820 | None:intergenic | 60.0% |
| GTAAGACACTGAGCGGCCGT+TGG | - | chr2_3:51000813-51000832 | None:intergenic | 60.0% | |
| CGAGGACCTGCACTCATCCA+TGG | - | chr2_3:51000840-51000859 | None:intergenic | 60.0% | |
| ACTGAGGGCTCAAGAGTCCG+AGG | - | chr2_3:51000858-51000877 | None:intergenic | 60.0% | |
| CCAATGTGCGGCTACTCCGA+TGG | - | chr2_3:51001026-51001045 | None:intergenic | 60.0% | |
| CCATCGGAGTAGCCGCACAT+TGG | + | chr2_3:51001023-51001042 | Msa0297310:exon | 60.0% | |
| GGAAAGTCCCGAGGCAGCAG+AGG | + | chr2_3:50997794-50997813 | Msa0297310:CDS | 65.0% | |
| AAGTCCCGAGGCAGCAGAGG+AGG | + | chr2_3:50997797-50997816 | Msa0297310:CDS | 65.0% | |
| CATGGCAGAAGGCCTCTGCC+TGG | - | chr2_3:50999569-50999588 | None:intergenic | 65.0% | |
| GGGGTGATGCCTCGCAAGGT+AGG | + | chr2_3:51000336-51000355 | Msa0297310:intron | 65.0% | |
| CTCTTGGCGGCCGCTATTCC+CGG | + | chr2_3:51000628-51000647 | Msa0297310:CDS | 65.0% | |
| TCTTGGCGGCCGCTATTCCC+GGG | + | chr2_3:51000629-51000648 | Msa0297310:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 50995991 | 51001485 | 50995991 | ID=Msa0297310;Name=Msa0297310 |
| chr2_3 | mRNA | 50995991 | 51001485 | 50995991 | ID=Msa0297310-mRNA-1;Parent=Msa0297310;Name=Msa0297310-mRNA-1;_AED=0.04;_eAED=0.04;_QI=217|0.37|0.33|1|0.25|0.22|9|451|515 |
| chr2_3 | exon | 50995991 | 50996396 | 50995991 | ID=Msa0297310-mRNA-1:exon:16085;Parent=Msa0297310-mRNA-1 |
| chr2_3 | exon | 50997264 | 50997478 | 50997264 | ID=Msa0297310-mRNA-1:exon:16086;Parent=Msa0297310-mRNA-1 |
| chr2_3 | exon | 50997485 | 50997680 | 50997485 | ID=Msa0297310-mRNA-1:exon:16087;Parent=Msa0297310-mRNA-1 |
| chr2_3 | exon | 50997687 | 50997879 | 50997687 | ID=Msa0297310-mRNA-1:exon:16088;Parent=Msa0297310-mRNA-1 |
| chr2_3 | exon | 50997886 | 50998057 | 50997886 | ID=Msa0297310-mRNA-1:exon:16089;Parent=Msa0297310-mRNA-1 |
| chr2_3 | exon | 50998086 | 50998093 | 50998086 | ID=Msa0297310-mRNA-1:exon:16090;Parent=Msa0297310-mRNA-1 |
| chr2_3 | exon | 50998120 | 50998235 | 50998120 | ID=Msa0297310-mRNA-1:exon:16091;Parent=Msa0297310-mRNA-1 |
| chr2_3 | exon | 51000306 | 51000353 | 51000306 | ID=Msa0297310-mRNA-1:exon:16092;Parent=Msa0297310-mRNA-1 |
| chr2_3 | exon | 51000624 | 51001485 | 51000624 | ID=Msa0297310-mRNA-1:exon:16093;Parent=Msa0297310-mRNA-1 |
| chr2_3 | five_prime_UTR | 50995991 | 50996207 | 50995991 | ID=Msa0297310-mRNA-1:five_prime_utr;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 50996208 | 50996396 | 50996208 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 50997264 | 50997478 | 50997264 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 50997485 | 50997680 | 50997485 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 50997687 | 50997879 | 50997687 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 50997886 | 50998057 | 50997886 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 50998086 | 50998093 | 50998086 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 50998120 | 50998235 | 50998120 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 51000306 | 51000353 | 51000306 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | CDS | 51000624 | 51001034 | 51000624 | ID=Msa0297310-mRNA-1:cds;Parent=Msa0297310-mRNA-1 |
| chr2_3 | three_prime_UTR | 51001035 | 51001485 | 51001035 | ID=Msa0297310-mRNA-1:three_prime_utr;Parent=Msa0297310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
