Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298790 | XP_004503368.1 | 69.672 | 366 | 77 | 9 | 1 | 353 | 1 | 345 | 5.70e-161 | 464 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298790 | sp|Q9LVI4|TIF6B_ARATH | 33.933 | 389 | 171 | 18 | 1 | 353 | 1 | 339 | 9.40e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298790 | A0A1S2YF40 | 69.672 | 366 | 77 | 9 | 1 | 353 | 1 | 345 | 2.72e-161 | 464 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0298790 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298790 | MtrunA17_Chr1g0161031 | 49.864 | 367 | 134 | 7 | 1 | 349 | 1 | 335 | 5.88e-104 | 310 |
| Msa0298790 | MtrunA17_Chr6g0478581 | 32.220 | 419 | 194 | 15 | 1 | 352 | 1 | 396 | 5.47e-46 | 162 |
| Msa0298790 | MtrunA17_Chr2g0301131 | 36.478 | 159 | 68 | 5 | 195 | 348 | 110 | 240 | 2.91e-16 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0298790 | AT3G17860.1 | 33.933 | 389 | 171 | 18 | 1 | 353 | 1 | 339 | 9.56e-36 | 133 |
| Msa0298790 | AT3G17860.2 | 34.393 | 346 | 152 | 16 | 44 | 353 | 20 | 326 | 1.89e-31 | 121 |
| Msa0298790 | AT3G17860.3 | 34.402 | 343 | 150 | 16 | 47 | 353 | 3 | 306 | 6.87e-31 | 119 |
| Msa0298790 | AT3G17860.4 | 34.402 | 343 | 150 | 16 | 47 | 353 | 3 | 306 | 6.87e-31 | 119 |
| Msa0298790 | AT1G48500.1 | 31.818 | 352 | 179 | 15 | 1 | 350 | 1 | 293 | 2.66e-25 | 104 |
| Msa0298790 | AT1G70700.2 | 36.245 | 229 | 88 | 9 | 113 | 341 | 50 | 220 | 3.47e-22 | 94.4 |
| Msa0298790 | AT1G70700.1 | 38.298 | 235 | 99 | 8 | 113 | 341 | 50 | 244 | 5.05e-22 | 94.4 |
| Msa0298790 | AT1G48500.2 | 31.045 | 335 | 171 | 14 | 1 | 334 | 1 | 276 | 6.25e-20 | 89.0 |
| Msa0298790 | AT1G70700.3 | 36.444 | 225 | 103 | 8 | 113 | 334 | 50 | 237 | 1.23e-18 | 85.1 |
| Msa0298790 | AT1G48500.3 | 31.142 | 289 | 152 | 11 | 47 | 334 | 4 | 246 | 5.67e-17 | 79.7 |
| Msa0298790 | AT5G20900.1 | 28.289 | 152 | 71 | 3 | 190 | 341 | 50 | 163 | 5.39e-11 | 61.6 |
Find 106 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGACGATGCTTGCATTTAT+AGG | 0.184858 | 2_3:+52994745 | None:intergenic |
| GATTTCTTGTTAATGTTATA+TGG | 0.220633 | 2_3:+52994907 | None:intergenic |
| TGAAACTGTATTAGCTTGAT+TGG | 0.288636 | 2_3:+52996427 | None:intergenic |
| ATGATCCATCATCACCATTA+TGG | 0.297946 | 2_3:+52997918 | None:intergenic |
| TAGTAAAATTACTACGATTC+AGG | 0.303233 | 2_3:+52996260 | None:intergenic |
| ACATCATGTTGTACAGGATA+TGG | 0.307686 | 2_3:+52996467 | None:intergenic |
| GAGGAGGCTGGTGCATTTGC+AGG | 0.320510 | 2_3:+52995622 | None:intergenic |
| CAACAGAAGAAGAAAGAAAA+AGG | 0.322679 | 2_3:+52998063 | None:intergenic |
| AGCAGATACTTTGTTGGAAA+AGG | 0.357605 | 2_3:+52997146 | None:intergenic |
| CATAAAACCAGCAGATGTTA+TGG | 0.358564 | 2_3:+52997062 | None:intergenic |
| CATATGAAGCTGCCACTACT+TGG | 0.361235 | 2_3:-52996344 | Msa0298790:CDS |
| AGTATGCGATGAAATAGATA+TGG | 0.369654 | 2_3:+52995585 | None:intergenic |
| GGAGGCTCGGCATTGCTAAC+AGG | 0.384286 | 2_3:+52995487 | None:intergenic |
| TTTAACTGCGAGAAATTCAT+TGG | 0.399647 | 2_3:+52995531 | None:intergenic |
| GTTGGTTGAGGCGATGTAAC+AGG | 0.403409 | 2_3:+52996314 | None:intergenic |
| TTACTACAGTCAAATGCATC+TGG | 0.414565 | 2_3:+52997036 | None:intergenic |
| TGTAGGCTTCACAAAGGGTT+CGG | 0.418966 | 2_3:-52997181 | Msa0298790:intron |
| TTTCTCGCAGTTAAAACAAC+TGG | 0.425409 | 2_3:-52995523 | Msa0298790:CDS |
| AAGATGGTAAGTTGGGAAGA+AGG | 0.425596 | 2_3:+52996129 | None:intergenic |
| CATAGCACAGACAGAACTTC+AGG | 0.434059 | 2_3:-52995674 | Msa0298790:CDS |
| CGCATAGAAGATGGTAAGTT+GGG | 0.437429 | 2_3:+52996122 | None:intergenic |
| TAGAAATCTTTCAATCATGA+TGG | 0.440350 | 2_3:-52996518 | Msa0298790:CDS |
| GGCACAAGCTATCCTGTTGT+TGG | 0.441454 | 2_3:-52995725 | Msa0298790:CDS |
| GCCATTACCATGCTGGCGTC+AGG | 0.443156 | 2_3:-52995451 | Msa0298790:intron |
| GTAGGCTTCACAAAGGGTTC+GGG | 0.445204 | 2_3:-52997180 | Msa0298790:intron |
| CACCATTCCTAGCCAACAAC+AGG | 0.452637 | 2_3:+52995713 | None:intergenic |
| ATCAACCATAATGGTGATGA+TGG | 0.457417 | 2_3:-52997923 | Msa0298790:CDS |
| ATATCTATTTCATCGCATAC+TGG | 0.462263 | 2_3:-52995583 | Msa0298790:CDS |
| GCAAATGCACCAGCCTCCTC+TGG | 0.467713 | 2_3:-52995619 | Msa0298790:CDS |
| CCCACCATTGGTGCCGTCGT+TGG | 0.469756 | 2_3:-52996287 | Msa0298790:CDS |
| GAGGAGGAAATCAACCATAA+TGG | 0.472291 | 2_3:-52997932 | Msa0298790:CDS |
| AAAACTCTCTGCTGAACCTC+AGG | 0.473072 | 2_3:-52997013 | Msa0298790:intron |
| GCAGATACTTTGTTGGAAAA+GGG | 0.473482 | 2_3:+52997147 | None:intergenic |
| TCGCATACTGGTGCACAGTC+AGG | 0.473936 | 2_3:-52995571 | Msa0298790:CDS |
| ATAAAACCAGCAGATGTTAT+GGG | 0.478111 | 2_3:+52997063 | None:intergenic |
| ATATGAAGCTGCCACTACTT+GGG | 0.478655 | 2_3:-52996343 | Msa0298790:CDS |
| TCTGATCCCATAACATCTGC+TGG | 0.481214 | 2_3:-52997069 | Msa0298790:CDS |
| ACCTGACGCCAGCATGGTAA+TGG | 0.485087 | 2_3:+52995450 | None:intergenic |
| GCCGTTACAAAATGATTCCT+CGG | 0.488198 | 2_3:+52996389 | None:intergenic |
| TAAGTAGTTTCCTATGGCTA+GGG | 0.489451 | 2_3:+52994795 | None:intergenic |
| GTAATGGCATCGATTACTCT+TGG | 0.489598 | 2_3:+52995466 | None:intergenic |
| AAGAGAGATACCTTGTCGGC+AGG | 0.494472 | 2_3:+52996072 | None:intergenic |
| AGTTGGGAAGAAGGCAGAGA+TGG | 0.495544 | 2_3:+52996138 | None:intergenic |
| TCAGGCTCGGAAAGCATCCT+TGG | 0.496291 | 2_3:-52995272 | Msa0298790:CDS |
| TTAAGTAGTTTCCTATGGCT+AGG | 0.497263 | 2_3:+52994794 | None:intergenic |
| ATGTTAATTCAAAGGTGGAC+TGG | 0.500795 | 2_3:-52994658 | Msa0298790:three_prime_UTR |
| AGAAATCTTTCAATCATGAT+GGG | 0.503355 | 2_3:-52996517 | Msa0298790:CDS |
| AAGCTATCCTGTTGTTGGCT+AGG | 0.504599 | 2_3:-52995720 | Msa0298790:CDS |
| ATCGATTACTCTTGGAGGCT+CGG | 0.505842 | 2_3:+52995474 | None:intergenic |
| CAACTTACCATCTTCTATGC+GGG | 0.506683 | 2_3:-52996120 | Msa0298790:CDS |
| TCCAACGACGGCACCAATGG+TGG | 0.507504 | 2_3:+52996286 | None:intergenic |
| ATCTTCACATCATGTTGTAC+AGG | 0.507813 | 2_3:+52996461 | None:intergenic |
| GGCATTGCTAACAGGAGTGA+TGG | 0.514325 | 2_3:+52995495 | None:intergenic |
| TATGAAGCTGCCACTACTTG+GGG | 0.520183 | 2_3:-52996342 | Msa0298790:CDS |
| CAACCAACTCTTCCCACCAT+TGG | 0.522868 | 2_3:-52996299 | Msa0298790:CDS |
| CCGCATAGAAGATGGTAAGT+TGG | 0.523235 | 2_3:+52996121 | None:intergenic |
| ATCCTGTTGTTGGCTAGGAA+TGG | 0.530502 | 2_3:-52995715 | Msa0298790:CDS |
| AACAAAGAGAGATACCTTGT+CGG | 0.533016 | 2_3:+52996068 | None:intergenic |
| CCGTTACAAAATGATTCCTC+GGG | 0.539326 | 2_3:+52996390 | None:intergenic |
| CTCACGAGCACACCGTCACC+AGG | 0.542238 | 2_3:+52995649 | None:intergenic |
| TGGTTGAGCAGATACTTTGT+TGG | 0.544131 | 2_3:+52997140 | None:intergenic |
| GCACCAATGGTGGGAAGAGT+TGG | 0.549558 | 2_3:+52996296 | None:intergenic |
| GACGGTACCCGCATAGAAGA+TGG | 0.552065 | 2_3:+52996113 | None:intergenic |
| AGAGAGATACCTTGTCGGCA+GGG | 0.552823 | 2_3:+52996073 | None:intergenic |
| ACGGCTGGTCAGAATATGAA+TGG | 0.552877 | 2_3:-52996371 | Msa0298790:CDS |
| CTTGGATGACCAGAGGAGGC+TGG | 0.553563 | 2_3:+52995610 | None:intergenic |
| ATGCAGCGATACCTCAGGCT+CGG | 0.560553 | 2_3:-52995285 | Msa0298790:intron |
| ATGGCATCGATTACTCTTGG+AGG | 0.566283 | 2_3:+52995469 | None:intergenic |
| GGATAATAGTCCCTAGCCAT+AGG | 0.568051 | 2_3:-52994805 | Msa0298790:three_prime_UTR |
| GATGTCATTGAAAACATTGA+CGG | 0.568358 | 2_3:+52996095 | None:intergenic |
| CATTCCAACGACGGCACCAA+TGG | 0.572081 | 2_3:+52996283 | None:intergenic |
| AATCGATGCCATTACCATGC+TGG | 0.572186 | 2_3:-52995458 | Msa0298790:CDS |
| CAGACAGAACTTCAGGCACC+TGG | 0.577240 | 2_3:-52995667 | Msa0298790:CDS |
| ACTGGTGCACAGTCAGGCAG+TGG | 0.578273 | 2_3:-52995565 | Msa0298790:CDS |
| GTATGCGATGAAATAGATAT+GGG | 0.584760 | 2_3:+52995586 | None:intergenic |
| CCATGGTACTGCTAAGGAGG+AGG | 0.587651 | 2_3:-52997948 | Msa0298790:CDS |
| CAATGACATCCCTGCCGACA+AGG | 0.588647 | 2_3:-52996082 | Msa0298790:intron |
| GAACTTCAGGCACCTGGTGA+CGG | 0.589320 | 2_3:-52995661 | Msa0298790:CDS |
| TTACTATGTTAATTCAAAGG+TGG | 0.596731 | 2_3:-52994663 | Msa0298790:three_prime_UTR |
| GCATTGCTAACAGGAGTGAT+GGG | 0.603727 | 2_3:+52995496 | None:intergenic |
| ACTCCATGGTACTGCTAAGG+AGG | 0.604086 | 2_3:-52997951 | Msa0298790:CDS |
| TTCTAGAAAAGCGCAAGGAG+AGG | 0.607349 | 2_3:-52995243 | Msa0298790:intron |
| GGCTAGGAATGGTGTATCAG+TGG | 0.612360 | 2_3:-52995704 | Msa0298790:CDS |
| AATACTCTCTCAGCAGAGCA+AGG | 0.614497 | 2_3:-52994826 | Msa0298790:three_prime_UTR |
| ACTACTCCATGGTACTGCTA+AGG | 0.614665 | 2_3:-52997954 | Msa0298790:CDS |
| GATGAAATAGATATGGGACT+TGG | 0.616222 | 2_3:+52995592 | None:intergenic |
| CCTCCTCCTTAGCAGTACCA+TGG | 0.619904 | 2_3:+52997948 | None:intergenic |
| TCTTTCAATCATGATGGGCA+AGG | 0.623986 | 2_3:-52996512 | Msa0298790:CDS |
| CCAACGACGGCACCAATGGT+GGG | 0.628134 | 2_3:+52996287 | None:intergenic |
| CAGCATACCTGACGCCAGCA+TGG | 0.631084 | 2_3:+52995444 | None:intergenic |
| ACCTCAAAAGACATCAAATG+TGG | 0.632234 | 2_3:+52997120 | None:intergenic |
| CATTGACGAACTCATTCCCG+AGG | 0.632457 | 2_3:-52996406 | Msa0298790:CDS |
| AAGGATGCTTTCCGAGCCTG+AGG | 0.641286 | 2_3:+52995274 | None:intergenic |
| TTCAATCATGATGGGCAAGG+TGG | 0.642760 | 2_3:-52996509 | Msa0298790:CDS |
| CGATTCAGGCATTCCAACGA+CGG | 0.643026 | 2_3:+52996274 | None:intergenic |
| GTATGTGTAGGCTTCACAAA+GGG | 0.645767 | 2_3:-52997186 | Msa0298790:intron |
| CAAAGGGTTCGGGTGCACAA+TGG | 0.652681 | 2_3:-52997170 | Msa0298790:CDS |
| GATGGATCATGCAAACACTC+TGG | 0.653555 | 2_3:-52997905 | Msa0298790:intron |
| GGTATGTGTAGGCTTCACAA+AGG | 0.665915 | 2_3:-52997187 | Msa0298790:intron |
| ATGAAGCTGCCACTACTTGG+GGG | 0.671873 | 2_3:-52996341 | Msa0298790:CDS |
| CCAACTTACCATCTTCTATG+CGG | 0.674088 | 2_3:-52996121 | Msa0298790:CDS |
| GGGACTTGGATGACCAGAGG+AGG | 0.679930 | 2_3:+52995606 | None:intergenic |
| AAAATGGTGAGAGATTTCAT+GGG | 0.689320 | 2_3:-52997998 | Msa0298790:CDS |
| TATGGGACTTGGATGACCAG+AGG | 0.694039 | 2_3:+52995603 | None:intergenic |
| TGTACTTCATCATAATACAA+CGG | 0.704713 | 2_3:-52994877 | Msa0298790:exon |
| ATGGTGGGAAGAGTTGGTTG+AGG | 0.716568 | 2_3:+52996302 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTACTTTTATAAAGAAAA+GGG | + | chr2_3:52997507-52997526 | None:intergenic | 10.0% |
| !!! | ATTTTACTTTTATAAAGAAA+AGG | + | chr2_3:52997508-52997527 | None:intergenic | 10.0% |
| !! | CTCTTAAAAAATAAACAATA+TGG | + | chr2_3:52995023-52995042 | None:intergenic | 15.0% |
| !! | ACTTAGTAGTATATTAATTA+AGG | - | chr2_3:52996035-52996054 | Msa0298790:intron | 15.0% |
| !! | CTTAGTAGTATATTAATTAA+GGG | - | chr2_3:52996036-52996055 | Msa0298790:intron | 15.0% |
| !! | TTTACCTTGTATTTATTTAT+AGG | + | chr2_3:52996684-52996703 | None:intergenic | 15.0% |
| !! | TAAATAAATACAAGGTAAAA+AGG | - | chr2_3:52996685-52996704 | Msa0298790:intron | 15.0% |
| !! | AAATTATTAAATGTGTAGAA+TGG | + | chr2_3:52997393-52997412 | None:intergenic | 15.0% |
| !!! | ATTTTACTATGTTAATTCAA+AGG | - | chr2_3:52998047-52998066 | Msa0298790:five_prime_UTR | 15.0% |
| !!! | AAGTACTTTTCAATTTTCTT+TGG | - | chr2_3:52994832-52994851 | Msa0298790:three_prime_UTR | 20.0% |
| !!! | TTCAAATTCAACTTTTGTAA+CGG | + | chr2_3:52995193-52995212 | None:intergenic | 20.0% |
| !!! | AGAATTGATTTTGAAATGTT+TGG | + | chr2_3:52995395-52995414 | None:intergenic | 20.0% |
| !! | AGATTGAAAAATTCACAATA+TGG | + | chr2_3:52995481-52995500 | None:intergenic | 20.0% |
| !!! | AATCTATTTTTTATCCCTTA+AGG | - | chr2_3:52995496-52995515 | Msa0298790:CDS | 20.0% |
| !!! | TGTAACATTTTTTACATTGA+CGG | - | chr2_3:52995896-52995915 | Msa0298790:intron | 20.0% |
| !! | GTTTATGAACATTTAACATT+TGG | - | chr2_3:52995966-52995985 | Msa0298790:intron | 20.0% |
| !! | TTGTTTATTGAAATCTTGTT+TGG | - | chr2_3:52997327-52997346 | Msa0298790:intron | 20.0% |
| !!! | TGTTTATTGAAATCTTGTTT+GGG | - | chr2_3:52997328-52997347 | Msa0298790:intron | 20.0% |
| !! | GATTTCTTGTTAATGTTATA+TGG | + | chr2_3:52997809-52997828 | None:intergenic | 20.0% |
| ! | ATGGTACTCTAAACAAAAAA+CGG | + | chr2_3:52994862-52994881 | None:intergenic | 25.0% |
| !!! | TCATGAGTGTTTAATTTGAT+TGG | - | chr2_3:52994894-52994913 | Msa0298790:CDS | 25.0% |
| ! | ACATGTTTCTCGTATAAAAA+TGG | - | chr2_3:52995260-52995279 | Msa0298790:CDS | 25.0% |
| ! | TTAATGCTAAGATCAATTGT+AGG | - | chr2_3:52995297-52995316 | Msa0298790:intron | 25.0% |
| !! | GAATTGATTCAACTTCAAAT+TGG | + | chr2_3:52995341-52995360 | None:intergenic | 25.0% |
| !! | TTGAAATGTTTGGATCTTTT+CGG | + | chr2_3:52995385-52995404 | None:intergenic | 25.0% |
| !!! | TATATGTTTGGTTTCACTTT+TGG | + | chr2_3:52995445-52995464 | None:intergenic | 25.0% |
| ! | CTTGTACTTGTTTAAATTTG+AGG | + | chr2_3:52996065-52996084 | None:intergenic | 25.0% |
| ! | AATTGCAAACAAACAATAGA+AGG | + | chr2_3:52996169-52996188 | None:intergenic | 25.0% |
| ! | TAGAAATCTTTCAATCATGA+TGG | - | chr2_3:52996195-52996214 | Msa0298790:intron | 25.0% |
| ! | AGAAATCTTTCAATCATGAT+GGG | - | chr2_3:52996196-52996215 | Msa0298790:intron | 25.0% |
| ! | TAGTAAAATTACTACGATTC+AGG | + | chr2_3:52996456-52996475 | None:intergenic | 25.0% |
| ! | TGTATTTATTTATAGGCAGA+AGG | + | chr2_3:52996677-52996696 | None:intergenic | 25.0% |
| ! | TCTGCCTATAAATAAATACA+AGG | - | chr2_3:52996677-52996696 | Msa0298790:intron | 25.0% |
| ! | CAAGGAAAAAAAATGAATTG+TGG | + | chr2_3:52996711-52996730 | None:intergenic | 25.0% |
| !! | TTTTTCGTTAACCAAGTTAT+TGG | + | chr2_3:52996921-52996940 | None:intergenic | 25.0% |
| !! | GTTTATTGAAATCTTGTTTG+GGG | - | chr2_3:52997329-52997348 | Msa0298790:intron | 25.0% |
| ! | AAAAGTAATGTGTGTAGAAA+TGG | + | chr2_3:52997658-52997677 | None:intergenic | 25.0% |
| ! | TGTACTTCATCATAATACAA+CGG | - | chr2_3:52997836-52997855 | Msa0298790:intron | 25.0% |
| !!! | TTCTTTTAAGTAGTTTCCTA+TGG | + | chr2_3:52997927-52997946 | None:intergenic | 25.0% |
| ! | TTACTATGTTAATTCAAAGG+TGG | - | chr2_3:52998050-52998069 | Msa0298790:five_prime_UTR | 25.0% |
| CAACAGAAGAAGAAAGAAAA+AGG | + | chr2_3:52994653-52994672 | None:intergenic | 30.0% | |
| !! | ATTTTTCAGAGACAAAGGAA+AGG | + | chr2_3:52994700-52994719 | None:intergenic | 30.0% |
| ! | TTTCCTTTGTCTCTGAAAAA+TGG | - | chr2_3:52994699-52994718 | Msa0298790:three_prime_UTR | 30.0% |
| AAAAATGGTGAGAGATTTCA+TGG | - | chr2_3:52994714-52994733 | Msa0298790:three_prime_UTR | 30.0% | |
| AAAATGGTGAGAGATTTCAT+GGG | - | chr2_3:52994715-52994734 | Msa0298790:three_prime_UTR | 30.0% | |
| AAAGAAAAAGAACTACTCCA+TGG | - | chr2_3:52994748-52994767 | Msa0298790:three_prime_UTR | 30.0% | |
| !! | TGAGTGTTTAATTTGATTGG+TGG | - | chr2_3:52994897-52994916 | Msa0298790:CDS | 30.0% |
| GTGTGCTAAATTTGTAATTC+CGG | - | chr2_3:52994972-52994991 | Msa0298790:intron | 30.0% | |
| TGTGCTAAATTTGTAATTCC+GGG | - | chr2_3:52994973-52994992 | Msa0298790:intron | 30.0% | |
| !!! | AGTTGATAACAAATTTTCCC+CGG | + | chr2_3:52994994-52995013 | None:intergenic | 30.0% |
| ATCAGTTTGACAAAATTTGG+TGG | + | chr2_3:52995130-52995149 | None:intergenic | 30.0% | |
| ! | CCAAATTTTGTCAAACTGAT+CGG | - | chr2_3:52995130-52995149 | Msa0298790:intron | 30.0% |
| AACCAAACATATACACTTAG+TGG | - | chr2_3:52995452-52995471 | Msa0298790:CDS | 30.0% | |
| ATCCACTAAGTGTATATGTT+TGG | + | chr2_3:52995457-52995476 | None:intergenic | 30.0% | |
| ! | TTTTATCCCTTAAGGTATAG+TGG | - | chr2_3:52995504-52995523 | Msa0298790:CDS | 30.0% |
| TTTATCCCTTAAGGTATAGT+GGG | - | chr2_3:52995505-52995524 | Msa0298790:CDS | 30.0% | |
| ATAAAACCAGCAGATGTTAT+GGG | + | chr2_3:52995653-52995672 | None:intergenic | 30.0% | |
| AAACAATAGAAGGAAGTGAA+GGG | + | chr2_3:52996159-52996178 | None:intergenic | 30.0% | |
| ! | TGAAACTGTATTAGCTTGAT+TGG | + | chr2_3:52996289-52996308 | None:intergenic | 30.0% |
| GATGTCATTGAAAACATTGA+CGG | + | chr2_3:52996621-52996640 | None:intergenic | 30.0% | |
| GTATGCGATGAAATAGATAT+GGG | + | chr2_3:52997130-52997149 | None:intergenic | 30.0% | |
| AGTATGCGATGAAATAGATA+TGG | + | chr2_3:52997131-52997150 | None:intergenic | 30.0% | |
| ATATCTATTTCATCGCATAC+TGG | - | chr2_3:52997130-52997149 | Msa0298790:CDS | 30.0% | |
| TTTAACTGCGAGAAATTCAT+TGG | + | chr2_3:52997185-52997204 | None:intergenic | 30.0% | |
| CTAACTGCAATAATGAGAAA+TGG | + | chr2_3:52997301-52997320 | None:intergenic | 30.0% | |
| CCATCCTAGATTAGATTTAA+GGG | - | chr2_3:52997629-52997648 | Msa0298790:intron | 30.0% | |
| CATTTAGTATTGTGTTTGCA+GGG | - | chr2_3:52997769-52997788 | Msa0298790:intron | 30.0% | |
| ! | AAGTACGTTCATAACTTTTG+CGG | - | chr2_3:52998017-52998036 | Msa0298790:exon | 30.0% |
| !! | TGTTGACGATTTTCTGAAGA+AGG | - | chr2_3:52994668-52994687 | Msa0298790:three_prime_UTR | 35.0% |
| !! | TCACCATTTTTCAGAGACAA+AGG | + | chr2_3:52994705-52994724 | None:intergenic | 35.0% |
| ! | ATCAACCATAATGGTGATGA+TGG | - | chr2_3:52994790-52994809 | Msa0298790:three_prime_UTR | 35.0% |
| ATGATCCATCATCACCATTA+TGG | + | chr2_3:52994798-52994817 | None:intergenic | 35.0% | |
| GTGCTAAATTTGTAATTCCG+GGG | - | chr2_3:52994974-52994993 | Msa0298790:intron | 35.0% | |
| ! | CTAAACATGCACTGATCTTA+AGG | + | chr2_3:52995064-52995083 | None:intergenic | 35.0% |
| AAGATCAGTGCATGTTTAGA+TGG | - | chr2_3:52995065-52995084 | Msa0298790:intron | 35.0% | |
| TAGATGGATGGTGAATTTGA+TGG | - | chr2_3:52995081-52995100 | Msa0298790:intron | 35.0% | |
| !! | ATGGTGAATTTGATGGTGAT+TGG | - | chr2_3:52995088-52995107 | Msa0298790:intron | 35.0% |
| CCGATCAGTTTGACAAAATT+TGG | + | chr2_3:52995133-52995152 | None:intergenic | 35.0% | |
| AGATCAATTGTAGGAGTCAA+AGG | - | chr2_3:52995306-52995325 | Msa0298790:intron | 35.0% | |
| ACATACCCACTATACCTTAA+GGG | + | chr2_3:52995513-52995532 | None:intergenic | 35.0% | |
| GCAGATACTTTGTTGGAAAA+GGG | + | chr2_3:52995569-52995588 | None:intergenic | 35.0% | |
| AGCAGATACTTTGTTGGAAA+AGG | + | chr2_3:52995570-52995589 | None:intergenic | 35.0% | |
| ! | ACCACATTTGATGTCTTTTG+AGG | - | chr2_3:52995592-52995611 | Msa0298790:CDS | 35.0% |
| ACCTCAAAAGACATCAAATG+TGG | + | chr2_3:52995596-52995615 | None:intergenic | 35.0% | |
| CATAAAACCAGCAGATGTTA+TGG | + | chr2_3:52995654-52995673 | None:intergenic | 35.0% | |
| TTACTACAGTCAAATGCATC+TGG | + | chr2_3:52995680-52995699 | None:intergenic | 35.0% | |
| CAAACAATAGAAGGAAGTGA+AGG | + | chr2_3:52996160-52996179 | None:intergenic | 35.0% | |
| ACATCATGTTGTACAGGATA+TGG | + | chr2_3:52996249-52996268 | None:intergenic | 35.0% | |
| ATCTTCACATCATGTTGTAC+AGG | + | chr2_3:52996255-52996274 | None:intergenic | 35.0% | |
| AACAAAGAGAGATACCTTGT+CGG | + | chr2_3:52996648-52996667 | None:intergenic | 35.0% | |
| !! | CAATGTAATGTTGGTGATCA+AGG | + | chr2_3:52996743-52996762 | None:intergenic | 35.0% |
| CTTGATCACCAACATTACAT+TGG | - | chr2_3:52996741-52996760 | Msa0298790:intron | 35.0% | |
| ATTAAGCTTGACTATGGTCA+AGG | + | chr2_3:52996950-52996969 | None:intergenic | 35.0% | |
| ACCATAGTCAAGCTTAATTG+TGG | - | chr2_3:52996952-52996971 | Msa0298790:intron | 35.0% | |
| ! | AATTGTGGCACTATTTCTTC+AGG | - | chr2_3:52996967-52996986 | Msa0298790:intron | 35.0% |
| GATGAAATAGATATGGGACT+TGG | + | chr2_3:52997124-52997143 | None:intergenic | 35.0% | |
| TTTCTCGCAGTTAAAACAAC+TGG | - | chr2_3:52997190-52997209 | Msa0298790:intron | 35.0% | |
| CCCTTAAATCTAATCTAGGA+TGG | + | chr2_3:52997632-52997651 | None:intergenic | 35.0% | |
| GTTGCCCTTAAATCTAATCT+AGG | + | chr2_3:52997636-52997655 | None:intergenic | 35.0% | |
| GCATTTAGTATTGTGTTTGC+AGG | - | chr2_3:52997768-52997787 | Msa0298790:intron | 35.0% | |
| TAAGTAGTTTCCTATGGCTA+GGG | + | chr2_3:52997921-52997940 | None:intergenic | 35.0% | |
| TTAAGTAGTTTCCTATGGCT+AGG | + | chr2_3:52997922-52997941 | None:intergenic | 35.0% | |
| ! | AGTACGTTCATAACTTTTGC+GGG | - | chr2_3:52998018-52998037 | Msa0298790:five_prime_UTR | 35.0% |
| ATGTTAATTCAAAGGTGGAC+TGG | - | chr2_3:52998055-52998074 | Msa0298790:five_prime_UTR | 35.0% | |
| GAGGAGGAAATCAACCATAA+TGG | - | chr2_3:52994781-52994800 | Msa0298790:three_prime_UTR | 40.0% | |
| CTCATGAATGTTTGCATGCA+TGG | + | chr2_3:52994881-52994900 | None:intergenic | 40.0% | |
| TCAGTGCATGTTTAGATGGA+TGG | - | chr2_3:52995069-52995088 | Msa0298790:intron | 40.0% | |
| CACATACCCACTATACCTTA+AGG | + | chr2_3:52995514-52995533 | None:intergenic | 40.0% | |
| !! | AAGGTATAGTGGGTATGTGT+AGG | - | chr2_3:52995515-52995534 | Msa0298790:CDS | 40.0% |
| GTATGTGTAGGCTTCACAAA+GGG | - | chr2_3:52995527-52995546 | Msa0298790:CDS | 40.0% | |
| TGGTTGAGCAGATACTTTGT+TGG | + | chr2_3:52995576-52995595 | None:intergenic | 40.0% | |
| ! | AGTTTAAAGCCTGAACAGCA+CGG | + | chr2_3:52995742-52995761 | None:intergenic | 40.0% |
| GTAATGATCGACGATTAAGC+TGG | - | chr2_3:52995865-52995884 | Msa0298790:intron | 40.0% | |
| CCAATCAGACTAGAATACAC+TGG | + | chr2_3:52995997-52996016 | None:intergenic | 40.0% | |
| CCAGTGTATTCTAGTCTGAT+TGG | - | chr2_3:52995994-52996013 | Msa0298790:intron | 40.0% | |
| !! | TCTTTCAATCATGATGGGCA+AGG | - | chr2_3:52996201-52996220 | Msa0298790:intron | 40.0% |
| CCGTTACAAAATGATTCCTC+GGG | + | chr2_3:52996326-52996345 | None:intergenic | 40.0% | |
| ! | CCCGAGGAATCATTTTGTAA+CGG | - | chr2_3:52996323-52996342 | Msa0298790:CDS | 40.0% |
| GCCGTTACAAAATGATTCCT+CGG | + | chr2_3:52996327-52996346 | None:intergenic | 40.0% | |
| ! | AGGAATCATTTTGTAACGGC+TGG | - | chr2_3:52996327-52996346 | Msa0298790:CDS | 40.0% |
| ATATGAAGCTGCCACTACTT+GGG | - | chr2_3:52996370-52996389 | Msa0298790:CDS | 40.0% | |
| ! | AAGATGGTAAGTTGGGAAGA+AGG | + | chr2_3:52996587-52996606 | None:intergenic | 40.0% |
| CGCATAGAAGATGGTAAGTT+GGG | + | chr2_3:52996594-52996613 | None:intergenic | 40.0% | |
| CCAACTTACCATCTTCTATG+CGG | - | chr2_3:52996592-52996611 | Msa0298790:intron | 40.0% | |
| CAACTTACCATCTTCTATGC+GGG | - | chr2_3:52996593-52996612 | Msa0298790:intron | 40.0% | |
| GAATCAGAGACCTAGCTTAA+GGG | + | chr2_3:52996792-52996811 | None:intergenic | 40.0% | |
| ATGGGGAAAAAATGGTTGAG+AGG | - | chr2_3:52996823-52996842 | Msa0298790:intron | 40.0% | |
| GCCACAATTAAGCTTGACTA+TGG | + | chr2_3:52996956-52996975 | None:intergenic | 40.0% | |
| !! | GTAATGGCATCGATTACTCT+TGG | + | chr2_3:52997250-52997269 | None:intergenic | 40.0% |
| GGTATCGCTGCATAAAAGAT+TGG | + | chr2_3:52997421-52997440 | None:intergenic | 40.0% | |
| !! | CTTTTCTAGAAAACGAGCCA+AGG | + | chr2_3:52997461-52997480 | None:intergenic | 40.0% |
| !! | TCGTTTTCTAGAAAAGCGCA+AGG | - | chr2_3:52997465-52997484 | Msa0298790:intron | 40.0% |
| TCATTGCCCCTCAATTTGAA+GGG | + | chr2_3:52997688-52997707 | None:intergenic | 40.0% | |
| ACGACGATGCTTGCATTTAT+AGG | + | chr2_3:52997971-52997990 | None:intergenic | 40.0% | |
| ! | GTACGTTCATAACTTTTGCG+GGG | - | chr2_3:52998019-52998038 | Msa0298790:five_prime_UTR | 40.0% |
| ! | TTCATAACTTTTGCGGGGTA+GGG | - | chr2_3:52998024-52998043 | Msa0298790:five_prime_UTR | 40.0% |
| ACTACTCCATGGTACTGCTA+AGG | - | chr2_3:52994759-52994778 | Msa0298790:three_prime_UTR | 45.0% | |
| GATGGATCATGCAAACACTC+TGG | - | chr2_3:52994808-52994827 | Msa0298790:three_prime_UTR | 45.0% | |
| GGTATGTGTAGGCTTCACAA+AGG | - | chr2_3:52995526-52995545 | Msa0298790:CDS | 45.0% | |
| TGTAGGCTTCACAAAGGGTT+CGG | - | chr2_3:52995532-52995551 | Msa0298790:CDS | 45.0% | |
| TCTGATCCCATAACATCTGC+TGG | - | chr2_3:52995644-52995663 | Msa0298790:CDS | 45.0% | |
| AAAACTCTCTGCTGAACCTC+AGG | - | chr2_3:52995700-52995719 | Msa0298790:CDS | 45.0% | |
| AAAGGGTAGCATCAAACCTG+AGG | + | chr2_3:52995719-52995738 | None:intergenic | 45.0% | |
| !! | TTCAATCATGATGGGCAAGG+TGG | - | chr2_3:52996204-52996223 | Msa0298790:intron | 45.0% |
| ! | ACGGCTGGTCAGAATATGAA+TGG | - | chr2_3:52996342-52996361 | Msa0298790:CDS | 45.0% |
| CATATGAAGCTGCCACTACT+TGG | - | chr2_3:52996369-52996388 | Msa0298790:CDS | 45.0% | |
| TATGAAGCTGCCACTACTTG+GGG | - | chr2_3:52996371-52996390 | Msa0298790:CDS | 45.0% | |
| CCGCATAGAAGATGGTAAGT+TGG | + | chr2_3:52996595-52996614 | None:intergenic | 45.0% | |
| !! | TGATCAAGGTCAAGTTGGCA+AGG | + | chr2_3:52996729-52996748 | None:intergenic | 45.0% |
| !! | GTTGGTGATCAAGGTCAAGT+TGG | + | chr2_3:52996734-52996753 | None:intergenic | 45.0% |
| CACTCGGACCAATGTAATGT+TGG | + | chr2_3:52996752-52996771 | None:intergenic | 45.0% | |
| CATTGGTCCGAGTGAAAAAC+TGG | - | chr2_3:52996758-52996777 | Msa0298790:intron | 45.0% | |
| TCCGAGTGAAAAACTGGACT+CGG | - | chr2_3:52996764-52996783 | Msa0298790:intron | 45.0% | |
| ! | TCCGAGTCCAGTTTTTCACT+CGG | + | chr2_3:52996768-52996787 | None:intergenic | 45.0% |
| CGAATCAGAGACCTAGCTTA+AGG | + | chr2_3:52996793-52996812 | None:intergenic | 45.0% | |
| !!! | CCATTTTTTCCCCATCCACA+AGG | + | chr2_3:52996818-52996837 | None:intergenic | 45.0% |
| CCTTGTGGATGGGGAAAAAA+TGG | - | chr2_3:52996815-52996834 | Msa0298790:intron | 45.0% | |
| !! | CTGACGACTAGTCTCTGTTT+GGG | + | chr2_3:52996880-52996899 | None:intergenic | 45.0% |
| ! | AGACTAGTCGTCAGCAAAGT+CGG | - | chr2_3:52996886-52996905 | Msa0298790:intron | 45.0% |
| GGTGGATCACACCAATAACT+TGG | - | chr2_3:52996907-52996926 | Msa0298790:intron | 45.0% | |
| ! | AAGCTATCCTGTTGTTGGCT+AGG | - | chr2_3:52996993-52997012 | Msa0298790:intron | 45.0% |
| ! | ATCCTGTTGTTGGCTAGGAA+TGG | - | chr2_3:52996998-52997017 | Msa0298790:intron | 45.0% |
| CATAGCACAGACAGAACTTC+AGG | - | chr2_3:52997039-52997058 | Msa0298790:CDS | 45.0% | |
| GCATTGCTAACAGGAGTGAT+GGG | + | chr2_3:52997220-52997239 | None:intergenic | 45.0% | |
| ATCGATTACTCTTGGAGGCT+CGG | + | chr2_3:52997242-52997261 | None:intergenic | 45.0% | |
| !! | ATGGCATCGATTACTCTTGG+AGG | + | chr2_3:52997247-52997266 | None:intergenic | 45.0% |
| AATCGATGCCATTACCATGC+TGG | - | chr2_3:52997255-52997274 | Msa0298790:intron | 45.0% | |
| ! | CTTTTATGCAGCGATACCTC+AGG | - | chr2_3:52997423-52997442 | Msa0298790:intron | 45.0% |
| ! | TTCTAGAAAAGCGCAAGGAG+AGG | - | chr2_3:52997470-52997489 | Msa0298790:intron | 45.0% |
| ! | TTTTGCGCCCCTTCAAATTG+AGG | - | chr2_3:52997677-52997696 | Msa0298790:intron | 45.0% |
| TTTGCGCCCCTTCAAATTGA+GGG | - | chr2_3:52997678-52997697 | Msa0298790:intron | 45.0% | |
| CATTGCCCCTCAATTTGAAG+GGG | + | chr2_3:52997687-52997706 | None:intergenic | 45.0% | |
| CTCATTGCCCCTCAATTTGA+AGG | + | chr2_3:52997689-52997708 | None:intergenic | 45.0% | |
| CTTCAAATTGAGGGGCAATG+AGG | - | chr2_3:52997687-52997706 | Msa0298790:intron | 45.0% | |
| AATACTCTCTCAGCAGAGCA+AGG | - | chr2_3:52997887-52997906 | Msa0298790:intron | 45.0% | |
| GGATAATAGTCCCTAGCCAT+AGG | - | chr2_3:52997908-52997927 | Msa0298790:CDS | 45.0% | |
| ! | GTTCATAACTTTTGCGGGGT+AGG | - | chr2_3:52998023-52998042 | Msa0298790:five_prime_UTR | 45.0% |
| ACTCCATGGTACTGCTAAGG+AGG | - | chr2_3:52994762-52994781 | Msa0298790:three_prime_UTR | 50.0% | |
| GTAGGCTTCACAAAGGGTTC+GGG | - | chr2_3:52995533-52995552 | Msa0298790:CDS | 50.0% | |
| AAGCCTGAACAGCACGGAAA+GGG | + | chr2_3:52995736-52995755 | None:intergenic | 50.0% | |
| AAAGCCTGAACAGCACGGAA+AGG | + | chr2_3:52995737-52995756 | None:intergenic | 50.0% | |
| CATTGACGAACTCATTCCCG+AGG | - | chr2_3:52996307-52996326 | Msa0298790:CDS | 50.0% | |
| ATGAAGCTGCCACTACTTGG+GGG | - | chr2_3:52996372-52996391 | Msa0298790:CDS | 50.0% | |
| ACAGGTATTCCCCCAAGTAG+TGG | + | chr2_3:52996384-52996403 | None:intergenic | 50.0% | |
| GTTGGTTGAGGCGATGTAAC+AGG | + | chr2_3:52996402-52996421 | None:intergenic | 50.0% | |
| ! | ATGGTGGGAAGAGTTGGTTG+AGG | + | chr2_3:52996414-52996433 | None:intergenic | 50.0% |
| CAACCAACTCTTCCCACCAT+TGG | - | chr2_3:52996414-52996433 | Msa0298790:CDS | 50.0% | |
| CGATTCAGGCATTCCAACGA+CGG | + | chr2_3:52996442-52996461 | None:intergenic | 50.0% | |
| AGTTGGGAAGAAGGCAGAGA+TGG | + | chr2_3:52996578-52996597 | None:intergenic | 50.0% | |
| AGAGAGATACCTTGTCGGCA+GGG | + | chr2_3:52996643-52996662 | None:intergenic | 50.0% | |
| AAGAGAGATACCTTGTCGGC+AGG | + | chr2_3:52996644-52996663 | None:intergenic | 50.0% | |
| ! | TCTGATTCGAGCCTTGTGGA+TGG | - | chr2_3:52996804-52996823 | Msa0298790:intron | 50.0% |
| ! | CTGATTCGAGCCTTGTGGAT+GGG | - | chr2_3:52996805-52996824 | Msa0298790:intron | 50.0% |
| ! | TGATTCGAGCCTTGTGGATG+GGG | - | chr2_3:52996806-52996825 | Msa0298790:intron | 50.0% |
| CTAGTCTCTGTTTGGGAGCA+TGG | + | chr2_3:52996873-52996892 | None:intergenic | 50.0% | |
| !! | GCTGACGACTAGTCTCTGTT+TGG | + | chr2_3:52996881-52996900 | None:intergenic | 50.0% |
| GGCACAAGCTATCCTGTTGT+TGG | - | chr2_3:52996988-52997007 | Msa0298790:intron | 50.0% | |
| CACCATTCCTAGCCAACAAC+AGG | + | chr2_3:52997003-52997022 | None:intergenic | 50.0% | |
| GGCTAGGAATGGTGTATCAG+TGG | - | chr2_3:52997009-52997028 | Msa0298790:intron | 50.0% | |
| TATGGGACTTGGATGACCAG+AGG | + | chr2_3:52997113-52997132 | None:intergenic | 50.0% | |
| GGCATTGCTAACAGGAGTGA+TGG | + | chr2_3:52997221-52997240 | None:intergenic | 50.0% | |
| TTGCGCCCCTTCAAATTGAG+GGG | - | chr2_3:52997679-52997698 | Msa0298790:intron | 50.0% | |
| CCTCCTCCTTAGCAGTACCA+TGG | + | chr2_3:52994768-52994787 | None:intergenic | 55.0% | |
| CCATGGTACTGCTAAGGAGG+AGG | - | chr2_3:52994765-52994784 | Msa0298790:three_prime_UTR | 55.0% | |
| ACACGCGCTAAGCGCATGTT+TGG | + | chr2_3:52995161-52995180 | None:intergenic | 55.0% | |
| ACATGCGCTTAGCGCGTGTT+TGG | - | chr2_3:52995162-52995181 | Msa0298790:intron | 55.0% | |
| CAAAGGGTTCGGGTGCACAA+TGG | - | chr2_3:52995543-52995562 | Msa0298790:CDS | 55.0% | |
| ! | CTACCCTTTCCGTGCTGTTC+AGG | - | chr2_3:52995730-52995749 | Msa0298790:intron | 55.0% |
| ! | GCACCAATGGTGGGAAGAGT+TGG | + | chr2_3:52996420-52996439 | None:intergenic | 55.0% |
| CATTCCAACGACGGCACCAA+TGG | + | chr2_3:52996433-52996452 | None:intergenic | 55.0% | |
| GACGGTACCCGCATAGAAGA+TGG | + | chr2_3:52996603-52996622 | None:intergenic | 55.0% | |
| CAATGACATCCCTGCCGACA+AGG | - | chr2_3:52996631-52996650 | Msa0298790:intron | 55.0% | |
| GGACTCGGATCCCTTAAGCT+AGG | - | chr2_3:52996779-52996798 | Msa0298790:intron | 55.0% | |
| ! | GGTCTCTGATTCGAGCCTTG+TGG | - | chr2_3:52996800-52996819 | Msa0298790:intron | 55.0% |
| CTAGTCGTCAGCAAAGTCGG+TGG | - | chr2_3:52996889-52996908 | Msa0298790:intron | 55.0% | |
| CAGACAGAACTTCAGGCACC+TGG | - | chr2_3:52997046-52997065 | Msa0298790:CDS | 55.0% | |
| GAACTTCAGGCACCTGGTGA+CGG | - | chr2_3:52997052-52997071 | Msa0298790:CDS | 55.0% | |
| TCGCATACTGGTGCACAGTC+AGG | - | chr2_3:52997142-52997161 | Msa0298790:CDS | 55.0% | |
| ACCTGACGCCAGCATGGTAA+TGG | + | chr2_3:52997266-52997285 | None:intergenic | 55.0% | |
| ATGCAGCGATACCTCAGGCT+CGG | - | chr2_3:52997428-52997447 | Msa0298790:intron | 55.0% | |
| AAGGATGCTTTCCGAGCCTG+AGG | + | chr2_3:52997442-52997461 | None:intergenic | 55.0% | |
| !! | TCAGGCTCGGAAAGCATCCT+TGG | - | chr2_3:52997441-52997460 | Msa0298790:intron | 55.0% |
| CCAACGACGGCACCAATGGT+GGG | + | chr2_3:52996429-52996448 | None:intergenic | 60.0% | |
| TCCAACGACGGCACCAATGG+TGG | + | chr2_3:52996430-52996449 | None:intergenic | 60.0% | |
| GAGAGGATAGACCCCGCTGA+AGG | - | chr2_3:52996840-52996859 | Msa0298790:intron | 60.0% | |
| AGGATAGACCCCGCTGAAGG+TGG | - | chr2_3:52996843-52996862 | Msa0298790:intron | 60.0% | |
| ATGGCTGACCACCTTCAGCG+GGG | + | chr2_3:52996854-52996873 | None:intergenic | 60.0% | |
| CATGGCTGACCACCTTCAGC+GGG | + | chr2_3:52996855-52996874 | None:intergenic | 60.0% | |
| GCATGGCTGACCACCTTCAG+CGG | + | chr2_3:52996856-52996875 | None:intergenic | 60.0% | |
| GAGGAGGCTGGTGCATTTGC+AGG | + | chr2_3:52997094-52997113 | None:intergenic | 60.0% | |
| GCAAATGCACCAGCCTCCTC+TGG | - | chr2_3:52997094-52997113 | Msa0298790:CDS | 60.0% | |
| CTTGGATGACCAGAGGAGGC+TGG | + | chr2_3:52997106-52997125 | None:intergenic | 60.0% | |
| GGGACTTGGATGACCAGAGG+AGG | + | chr2_3:52997110-52997129 | None:intergenic | 60.0% | |
| ACTGGTGCACAGTCAGGCAG+TGG | - | chr2_3:52997148-52997167 | Msa0298790:CDS | 60.0% | |
| GGAGGCTCGGCATTGCTAAC+AGG | + | chr2_3:52997229-52997248 | None:intergenic | 60.0% | |
| GCCATTACCATGCTGGCGTC+AGG | - | chr2_3:52997262-52997281 | Msa0298790:intron | 60.0% | |
| CAGCATACCTGACGCCAGCA+TGG | + | chr2_3:52997272-52997291 | None:intergenic | 60.0% | |
| CATGCTGGCGTCAGGTATGC+TGG | - | chr2_3:52997270-52997289 | Msa0298790:intron | 60.0% | |
| !! | CCCACCATTGGTGCCGTCGT+TGG | - | chr2_3:52996426-52996445 | Msa0298790:CDS | 65.0% |
| CTCACGAGCACACCGTCACC+AGG | + | chr2_3:52997067-52997086 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 52994643 | 52998092 | 52994643 | ID=Msa0298790;Name=Msa0298790 |
| chr2_3 | mRNA | 52994643 | 52998092 | 52994643 | ID=Msa0298790-mRNA-1;Parent=Msa0298790;Name=Msa0298790-mRNA-1;_AED=0.06;_eAED=0.06;_QI=75|1|1|1|1|1|7|242|353 |
| chr2_3 | exon | 52994643 | 52994945 | 52994643 | ID=Msa0298790-mRNA-1:exon:17007;Parent=Msa0298790-mRNA-1 |
| chr2_3 | exon | 52995244 | 52995301 | 52995244 | ID=Msa0298790-mRNA-1:exon:17006;Parent=Msa0298790-mRNA-1 |
| chr2_3 | exon | 52995452 | 52995746 | 52995452 | ID=Msa0298790-mRNA-1:exon:17005;Parent=Msa0298790-mRNA-1 |
| chr2_3 | exon | 52996083 | 52996170 | 52996083 | ID=Msa0298790-mRNA-1:exon:17004;Parent=Msa0298790-mRNA-1 |
| chr2_3 | exon | 52996275 | 52996537 | 52996275 | ID=Msa0298790-mRNA-1:exon:17003;Parent=Msa0298790-mRNA-1 |
| chr2_3 | exon | 52997014 | 52997198 | 52997014 | ID=Msa0298790-mRNA-1:exon:17002;Parent=Msa0298790-mRNA-1 |
| chr2_3 | exon | 52997906 | 52998092 | 52997906 | ID=Msa0298790-mRNA-1:exon:17001;Parent=Msa0298790-mRNA-1 |
| chr2_3 | five_prime_UTR | 52998018 | 52998092 | 52998018 | ID=Msa0298790-mRNA-1:five_prime_utr;Parent=Msa0298790-mRNA-1 |
| chr2_3 | CDS | 52997906 | 52998017 | 52997906 | ID=Msa0298790-mRNA-1:cds;Parent=Msa0298790-mRNA-1 |
| chr2_3 | CDS | 52997014 | 52997198 | 52997014 | ID=Msa0298790-mRNA-1:cds;Parent=Msa0298790-mRNA-1 |
| chr2_3 | CDS | 52996275 | 52996537 | 52996275 | ID=Msa0298790-mRNA-1:cds;Parent=Msa0298790-mRNA-1 |
| chr2_3 | CDS | 52996083 | 52996170 | 52996083 | ID=Msa0298790-mRNA-1:cds;Parent=Msa0298790-mRNA-1 |
| chr2_3 | CDS | 52995452 | 52995746 | 52995452 | ID=Msa0298790-mRNA-1:cds;Parent=Msa0298790-mRNA-1 |
| chr2_3 | CDS | 52995244 | 52995301 | 52995244 | ID=Msa0298790-mRNA-1:cds;Parent=Msa0298790-mRNA-1 |
| chr2_3 | CDS | 52994885 | 52994945 | 52994885 | ID=Msa0298790-mRNA-1:cds;Parent=Msa0298790-mRNA-1 |
| chr2_3 | three_prime_UTR | 52994643 | 52994884 | 52994643 | ID=Msa0298790-mRNA-1:three_prime_utr;Parent=Msa0298790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
