AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0299940


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0299940 MtrunA17_Chr2g0324511 85.890 163 20 2 1 160 1 163 1.01e-92 275
Msa0299940 MtrunA17_Chr2g0324511 83.036 112 15 2 210 317 6 117 5.09e-54 176
Msa0299940 MtrunA17_Chr4g0040201 62.887 194 63 3 12 201 13 201 6.26e-79 241
Msa0299940 MtrunA17_Chr4g0040201 49.751 201 39 5 213 358 8 201 4.97e-49 164
Msa0299940 MtrunA17_Chr2g0324571 86.441 118 12 2 46 160 2 118 2.43e-64 201
Msa0299940 MtrunA17_Chr2g0324571 87.500 72 5 2 249 317 2 72 1.11e-32 119
Msa0299940 MtrunA17_Chr2g0324521 82.759 116 18 2 46 160 2 116 7.43e-58 184
Msa0299940 MtrunA17_Chr2g0324521 75.362 69 17 0 249 317 2 70 1.42e-27 105
Msa0299940 MtrunA17_Chr2g0324531 73.333 60 16 0 315 374 1 60 6.73e-24 93.6
Msa0299940 MtrunA17_Chr2g0324531 76.471 51 12 0 159 209 2 52 2.31e-20 84.0
Msa0299940 MtrunA17_Chr2g0282341 34.815 135 82 2 49 181 4 134 1.91e-23 94.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0299940 AT4G20970.1 37.430 179 98 5 13 180 11 186 6.46e-27 106
Msa0299940 AT4G20970.1 45.045 111 51 2 216 317 11 120 4.50e-16 76.3
Msa0299940 AT1G10585.1 28.571 175 115 4 11 184 12 177 3.58e-14 70.9
Msa0299940 AT1G10586.1 25.714 175 120 4 7 180 8 173 7.17e-11 61.2

Find 86 sgRNAs with CRISPR-Local

Find 847 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTCTGGGATCTTGAAAT+TGG 0.214902 2_3:+55230063 Msa0299940:CDS
TTTCAATCTCTCGCCTATTT+TGG 0.215651 2_3:-55218309 None:intergenic
TTTCAATCTCTCGCCTATTT+TGG 0.215651 2_3:-55229998 None:intergenic
TATCTCTTCAAATTCTTCTT+TGG 0.234992 2_3:+55216653 Msa0299940:CDS
ATTTCATGAATCTCTATTTC+TGG 0.237037 2_3:-55216534 None:intergenic
CAATTGTGGGATCTTGAAAT+TGG 0.247122 2_3:+55218374 Msa0299940:CDS
GGTGGCTGCTCGAGTTCTTC+TGG 0.260572 2_3:+55228969 Msa0299940:CDS
GGAGAAGAAAGAAAGTTTAA+TGG 0.269701 2_3:+55216455 Msa0299940:CDS
AGAGAAGAAAGAAAGTTTAA+TGG 0.275748 2_3:+55228926 Msa0299940:CDS
GAAGCATAAATATATGTATC+AGG 0.277327 2_3:+55230145 Msa0299940:three_prime_UTR
GGTGGCTGCTCGAGTTCTTC+TGG 0.283108 2_3:+55216498 Msa0299940:CDS
CCGCAATCTTTGTTACGATT+TGG 0.283657 2_3:+55218281 Msa0299940:CDS
CCGCAATCTTTGTTACGATT+TGG 0.283657 2_3:+55229970 Msa0299940:CDS
TGGAAACACAGCCTCAATTC+TGG 0.290627 2_3:+55230049 Msa0299940:CDS
ATCACCTTTGGATTATAGTT+AGG 0.301144 2_3:-55215317 None:intergenic
AGAAATAGAGATTCATGAAA+TGG 0.340707 2_3:+55216536 Msa0299940:CDS
GAGAGTTGAGTTTAGAAAAG+AGG 0.353043 2_3:-55215289 None:intergenic
GAGAGTTGAGTTTAGAAAAG+AGG 0.353043 2_3:-55228093 None:intergenic
TTTATGCTTCATCAAGGAAT+TGG 0.353724 2_3:-55230132 None:intergenic
GAGAAGAAAGAAAGTTTAAT+GGG 0.355968 2_3:+55228927 Msa0299940:CDS
GAGAAGAAAGAAAGTTTAAT+GGG 0.362015 2_3:+55216456 Msa0299940:CDS
CGATTTGGAGAAACCAAAAT+AGG 0.365801 2_3:+55218296 Msa0299940:CDS
CGATTTGGAGAAACCAAAAT+AGG 0.365801 2_3:+55229985 Msa0299940:CDS
AACTATCTTTCTTTCGACTT+TGG 0.382287 2_3:-55215237 None:intergenic
TAGAAAAGAGGATCTTCATT+TGG 0.386590 2_3:-55215277 None:intergenic
TAGAAAAGAGGATCTTCATT+TGG 0.386590 2_3:-55228081 None:intergenic
AACGATCTTTCTTTCGACTT+TGG 0.395490 2_3:-55228041 None:intergenic
ATTGCCTCATCTACTTGATC+AGG 0.400525 2_3:-55216390 None:intergenic
ATTGCCTCATCTACTTGATC+AGG 0.400525 2_3:-55228861 None:intergenic
TCACCTTTGGATTATAGTTA+GGG 0.404073 2_3:-55215316 None:intergenic
TTGAAATTGGAAGTGAGAGT+TGG 0.404544 2_3:+55218387 Msa0299940:CDS
TTGAAATTGGAAGTGAGAGT+TGG 0.404544 2_3:+55230076 Msa0299940:CDS
CAAACATTATATTTGTCTCT+AGG 0.410779 2_3:-55228899 None:intergenic
CTTTCGACTTTGGTTGAAGA+AGG 0.411324 2_3:-55228031 None:intergenic
TCTTCAAATTCTTCTTTGGC+TGG 0.418592 2_3:+55216657 Msa0299940:CDS
CGAGAGATTGAAAGCATTTG+TGG 0.420058 2_3:+55218319 Msa0299940:CDS
CGAGAGATTGAAAGCATTTG+TGG 0.420058 2_3:+55230008 Msa0299940:CDS
TGATTTCACAGAAAATAAAA+TGG 0.425918 2_3:-55216599 None:intergenic
TCAAGGAATTGGTAAACTCT+TGG 0.445020 2_3:-55230121 None:intergenic
GAAATAGAGATTCATGAAAT+GGG 0.448568 2_3:+55216537 Msa0299940:CDS
AAAATAGAGATTCATGAAAT+GGG 0.456591 2_3:+55229008 Msa0299940:CDS
TCTTCATACCGTGCTTGCTC+AGG 0.463347 2_3:+55216689 Msa0299940:CDS
TGAAATTGGAAGTGAGAGTT+GGG 0.469657 2_3:+55218388 Msa0299940:CDS
TGAAATTGGAAGTGAGAGTT+GGG 0.469657 2_3:+55230077 Msa0299940:CDS
GGAAACACAGCCTCAATTCT+GGG 0.475798 2_3:+55230050 Msa0299940:CDS
ATCACCTTTGGATTATAGCT+AGG 0.496982 2_3:-55228121 None:intergenic
AGGCAATAAACTACATAAAG+AGG 0.505072 2_3:+55216406 Msa0299940:CDS
ATTTCAAGATCCCACAATTG+AGG 0.509351 2_3:-55218371 None:intergenic
CATATATTTATGCTTCATCA+AGG 0.515649 2_3:-55230138 None:intergenic
TCACCTTTGGATTATAGCTA+GGG 0.515824 2_3:-55228120 None:intergenic
TCATCTACTTGATCAGGTAA+TGG 0.516045 2_3:-55216384 None:intergenic
TCATCTACTTGATCAGGTAA+TGG 0.516045 2_3:-55228855 None:intergenic
ATTTCAAGATCCCAGAATTG+AGG 0.533997 2_3:-55230060 None:intergenic
AAGAAGAGATCACGTGGTGG+TGG 0.544599 2_3:+55216480 Msa0299940:CDS
GGAAACACAGCCTCAATTGT+GGG 0.559018 2_3:+55218361 Msa0299940:CDS
GACAAATATAAACTTAGCAA+AGG 0.562346 2_3:+55216434 Msa0299940:CDS
TCGACTTTGGTTGAAGAACA+AGG 0.563919 2_3:-55215224 None:intergenic
CTGTGTTTCCACATCGCTCA+CGG 0.565280 2_3:-55218348 None:intergenic
CTGTGTTTCCACATCGCTCA+CGG 0.565280 2_3:-55230037 None:intergenic
TGGAAACACAGCCTCAATTG+TGG 0.568137 2_3:+55218360 Msa0299940:CDS
TACAAGTGATAGTAACATGT+GGG 0.572565 2_3:+55216568 Msa0299940:CDS
AGATTGAAAGCATTTGTGGA+AGG 0.584279 2_3:+55218323 Msa0299940:CDS
AGATTGAAAGCATTTGTGGA+AGG 0.584279 2_3:+55230012 Msa0299940:CDS
TATATATACCTGAGCAAGCA+CGG 0.595399 2_3:-55216697 None:intergenic
AAGCATAAATATATGTATCA+GGG 0.602375 2_3:+55230146 Msa0299940:three_prime_UTR
GCACGGTATGAAGAAGTGAA+TGG 0.602985 2_3:-55216680 None:intergenic
TGTTACAATCACTTGTAGAG+TGG 0.604182 2_3:-55229033 None:intergenic
CCAAATCGTAACAAAGATTG+CGG 0.605051 2_3:-55218281 None:intergenic
CCAAATCGTAACAAAGATTG+CGG 0.605051 2_3:-55229970 None:intergenic
GTTACAATCACTTGTAGAGT+GGG 0.605139 2_3:-55229032 None:intergenic
TGTTACTATCACTTGTAGAG+TGG 0.621994 2_3:-55216562 None:intergenic
TCTCCCTAGCTATAATCCAA+AGG 0.625430 2_3:+55228117 Msa0299940:CDS
AATAAGAGATCACGTGATGG+TGG 0.625950 2_3:+55228951 Msa0299940:CDS
TCTCCCTAACTATAATCCAA+AGG 0.627898 2_3:+55215313 Msa0299940:CDS
ATTACCTGATCAAGTAGATG+AGG 0.635272 2_3:+55216386 Msa0299940:CDS
ATTACCTGATCAAGTAGATG+AGG 0.635272 2_3:+55228857 Msa0299940:CDS
CTACAAGTGATAGTAACATG+TGG 0.646380 2_3:+55216567 Msa0299940:CDS
GGAAATAAGAGATCACGTGA+TGG 0.672227 2_3:+55228948 Msa0299940:CDS
TCAATGGATCATAATCAACA+AGG 0.673310 2_3:+55215194 None:intergenic
GGAAGGATCCGTGAGCGATG+TGG 0.680798 2_3:+55218340 Msa0299940:CDS
GGAAGGATCCGTGAGCGATG+TGG 0.680798 2_3:+55230029 Msa0299940:CDS
ACAAGTGATAGTAACATGTG+GGG 0.710951 2_3:+55216569 Msa0299940:CDS
ATGGATCATAATCAACAAGG+AGG 0.711780 2_3:+55215197 Msa0299940:CDS
ACTGCATGAAGAGAACGTTG+AGG 0.725880 2_3:+55216629 Msa0299940:CDS
ATGGGAAAGAAGAGATCACG+TGG 0.742402 2_3:+55216474 Msa0299940:CDS
GGAAAGAAGAGATCACGTGG+TGG 0.761716 2_3:+55216477 Msa0299940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTATAATATTTGTTGTTA+GGG - chr2_3:55215876-55215895 None:intergenic 10.0%
!!! AAATTATAATATTTGTTGTT+AGG - chr2_3:55215877-55215896 None:intergenic 10.0%
!! ATATATGTATATATATATAG+GGG - chr2_3:55218108-55218127 None:intergenic 10.0%
!!! ATATATTTTTAATAGAATTC+TGG + chr2_3:55218573-55218592 Msa0299940:intron 10.0%
!! AAATATTATCATCAAATAAT+TGG + chr2_3:55218957-55218976 Msa0299940:intron 10.0%
!! GTTGAAAAAAAAATTATTAT+TGG + chr2_3:55219590-55219609 Msa0299940:intron 10.0%
!!! ATAAATAATTAATGTTTCTA+AGG + chr2_3:55220170-55220189 Msa0299940:intron 10.0%
!!! TTATGATAAATTGTTTATTT+TGG + chr2_3:55220556-55220575 Msa0299940:intron 10.0%
!!! GAATTTTATAATTTTTTTCA+AGG - chr2_3:55221211-55221230 None:intergenic 10.0%
!! TATTATTAAATATTGTATTG+GGG - chr2_3:55222304-55222323 None:intergenic 10.0%
!! GTCAAAAAATAAAATAAAAA+AGG + chr2_3:55225154-55225173 Msa0299940:intron 10.0%
!! TTTCAATTAAGTATTTAAAA+AGG - chr2_3:55225216-55225235 None:intergenic 10.0%
!! AAAATTAAATCATAATTCAT+CGG + chr2_3:55226778-55226797 Msa0299940:intron 10.0%
!!! TTGATTTTTTTATAAACCAA+AGG + chr2_3:55215369-55215388 Msa0299940:intron 15.0%
!! ATTGAACAAAAAAAAAACAT+GGG - chr2_3:55215553-55215572 None:intergenic 15.0%
!! AATTGAACAAAAAAAAAACA+TGG - chr2_3:55215554-55215573 None:intergenic 15.0%
!! AATATATTTATCAATCTTCT+AGG - chr2_3:55215997-55216016 None:intergenic 15.0%
!!! GACTTTTTTTTTAATCTTTA+CGG + chr2_3:55216081-55216100 Msa0299940:intron 15.0%
!!! TTAAAAGCTTATTTTTACAT+AGG + chr2_3:55216162-55216181 Msa0299940:intron 15.0%
!! ATGAATAACACATATTAATT+TGG + chr2_3:55216327-55216346 Msa0299940:intron 15.0%
!! ATATGTTATATCATGATTTA+TGG - chr2_3:55216948-55216967 None:intergenic 15.0%
!! CACATTCAAAAAATTAAAAA+GGG - chr2_3:55218498-55218517 None:intergenic 15.0%
!! ACACATTCAAAAAATTAAAA+AGG - chr2_3:55218499-55218518 None:intergenic 15.0%
!! TATTGTCAAAAAATAATAGA+CGG - chr2_3:55218912-55218931 None:intergenic 15.0%
!! AATATCATTTCTCTATATAA+AGG + chr2_3:55219536-55219555 Msa0299940:intron 15.0%
!!! ATCTATAACTAATTTTGATT+TGG - chr2_3:55221233-55221252 None:intergenic 15.0%
!! TCAAAATTAGTTATAGATAT+TGG + chr2_3:55221235-55221254 Msa0299940:intron 15.0%
!!! GAATAGAACAATTTTTTATT+AGG - chr2_3:55221729-55221748 None:intergenic 15.0%
!!! GAATAGAACAATTTTTTATT+AGG - chr2_3:55221729-55221748 None:intergenic 15.0%
!!! GATTTTTTGTTAAATATAGA+AGG - chr2_3:55223325-55223344 None:intergenic 15.0%
!! TCTATATTTAACAAAAAATC+TGG + chr2_3:55223325-55223344 Msa0299940:intron 15.0%
!!! ATTTGTATCATTTTATATCA+AGG + chr2_3:55223845-55223864 Msa0299940:intron 15.0%
!! ATATTATTACTTGATGAATT+GGG - chr2_3:55224927-55224946 None:intergenic 15.0%
!! TATATTATTACTTGATGAAT+TGG - chr2_3:55224928-55224947 None:intergenic 15.0%
!! TAATATAGAAAAAACACAAA+TGG + chr2_3:55224941-55224960 Msa0299940:intron 15.0%
!! ATGTGTAAAATAAATGTATA+TGG + chr2_3:55225070-55225089 Msa0299940:intron 15.0%
!! TGTGTAAAATAAATGTATAT+GGG + chr2_3:55225071-55225090 Msa0299940:intron 15.0%
!! TTAAACTTTAGATATATTCA+TGG + chr2_3:55225261-55225280 Msa0299940:intron 15.0%
!! AAAAAACAGATATCTATTAA+AGG + chr2_3:55225480-55225499 Msa0299940:intron 15.0%
!! TGTGAATTTAATGATAAATA+AGG + chr2_3:55225878-55225897 Msa0299940:intron 15.0%
!! ATACATCAAAAAATACTATT+AGG + chr2_3:55226424-55226443 Msa0299940:intron 15.0%
!!! TTTTTCTCTTAATAATAATG+CGG + chr2_3:55227264-55227283 Msa0299940:intron 15.0%
!!! TTTTCTTCTTTTTTTTTTTC+CGG - chr2_3:55227345-55227364 None:intergenic 15.0%
!! TTTAGTAGATATATATAGTT+TGG - chr2_3:55227849-55227868 None:intergenic 15.0%
!!! TATTTGTTGTAACAAAAATT+CGG + chr2_3:55227970-55227989 Msa0299940:intron 15.0%
!!! GATAATTTTTTTTGTTATGT+AGG - chr2_3:55228603-55228622 None:intergenic 15.0%
!! AACACATATACTTATTAATT+TGG + chr2_3:55228798-55228817 Msa0299940:intron 15.0%
!! TAATTTCACAGAAAATAAAA+TGG - chr2_3:55229073-55229092 None:intergenic 15.0%
!!! TTTTTAGAATTTTTAACATG+TGG - chr2_3:55229343-55229362 None:intergenic 15.0%
!!! TAAACATAGAAATTTTGTAT+TGG - chr2_3:55229435-55229454 None:intergenic 15.0%
!! GAAAAAAAAAAGTTATATCA+TGG - chr2_3:55229506-55229525 None:intergenic 15.0%
!!! TAAAAATATTGCAACATTTT+TGG - chr2_3:55229749-55229768 None:intergenic 15.0%
!! GGTAAATTAAAGAAGAAAAA+AGG - chr2_3:55215602-55215621 None:intergenic 20.0%
!! TGATTTCACAGAAAATAAAA+TGG - chr2_3:55216602-55216621 None:intergenic 20.0%
!!! TTTCTTTTTTTGAAGAAAAG+TGG + chr2_3:55216847-55216866 Msa0299940:intron 20.0%
!! TAAATTTAATAGTGTGACAT+TGG + chr2_3:55216913-55216932 Msa0299940:intron 20.0%
!!! TTATTTTCTATAACATGGAA+AGG - chr2_3:55216976-55216995 None:intergenic 20.0%
!!! TATGTATATATATGCACTTT+TGG - chr2_3:55217101-55217120 None:intergenic 20.0%
!! AAAAAAAACAAAGAGAGAAA+AGG - chr2_3:55217448-55217467 None:intergenic 20.0%
!!! AACATGAATTTTTAATCAAG+TGG + chr2_3:55217570-55217589 Msa0299940:intron 20.0%
!!! CTTTTTAGCTTAATTTTCAT+AGG + chr2_3:55217659-55217678 Msa0299940:intron 20.0%
!!! ATTTTTTGAAGAATAGAACT+TGG + chr2_3:55217720-55217739 Msa0299940:intron 20.0%
!! AATTTATATACCATTTGTAC+AGG - chr2_3:55217783-55217802 None:intergenic 20.0%
!! TGTACAAATGGTATATAAAT+TGG + chr2_3:55217782-55217801 Msa0299940:intron 20.0%
!! GGTATATAAATTGGAAAATA+CGG + chr2_3:55217791-55217810 Msa0299940:intron 20.0%
!!! TCTAAGCCATTAATTTTAAT+TGG + chr2_3:55218024-55218043 Msa0299940:intron 20.0%
!!! AAAAGATTAGCTCATAATTA+AGG + chr2_3:55218540-55218559 Msa0299940:intron 20.0%
!!! AAGAAAACTTTTGTAGTATT+TGG + chr2_3:55218723-55218742 Msa0299940:intron 20.0%
!!! TAGTATTTGGAAATTTTTCA+AGG + chr2_3:55218736-55218755 Msa0299940:intron 20.0%
!! TTCAAGGAAGAATAATAAAA+CGG + chr2_3:55218752-55218771 Msa0299940:intron 20.0%
!!! GTTTGAAATAGCTATTATAA+GGG - chr2_3:55218820-55218839 None:intergenic 20.0%
!!! TGTTTGAAATAGCTATTATA+AGG - chr2_3:55218821-55218840 None:intergenic 20.0%
!! ATTGTCAAAAAATAATAGAC+GGG - chr2_3:55218911-55218930 None:intergenic 20.0%
!!! TACTCTTCAAACATTTTATT+AGG + chr2_3:55218992-55219011 Msa0299940:intron 20.0%
!!! AAAAAAAAAGTGTTTCAAAC+AGG - chr2_3:55219079-55219098 None:intergenic 20.0%
!!! TTTTGGTTTTTTAAATGTTG+GGG - chr2_3:55219169-55219188 None:intergenic 20.0%
!!! GTTTTGGTTTTTTAAATGTT+GGG - chr2_3:55219170-55219189 None:intergenic 20.0%
!!! AGTTTTGGTTTTTTAAATGT+TGG - chr2_3:55219171-55219190 None:intergenic 20.0%
!! AAAATAATAGAGAGAGAAAA+AGG + chr2_3:55219439-55219458 Msa0299940:intron 20.0%
!!! AAATATTGATGGTAGTAATA+AGG + chr2_3:55219783-55219802 Msa0299940:intron 20.0%
!!! AATATTGATGGTAGTAATAA+GGG + chr2_3:55219784-55219803 Msa0299940:intron 20.0%
!! AAGAATAATGCAGAATATAA+GGG - chr2_3:55220058-55220077 None:intergenic 20.0%
!! TAAGAATAATGCAGAATATA+AGG - chr2_3:55220059-55220078 None:intergenic 20.0%
!! AAAAAGATAGACTAAAGTTA+TGG - chr2_3:55220208-55220227 None:intergenic 20.0%
!! AATGGAATAAATTAACTACA+GGG - chr2_3:55220344-55220363 None:intergenic 20.0%
!! AAATGGAATAAATTAACTAC+AGG - chr2_3:55220345-55220364 None:intergenic 20.0%
!!! ATTTATTCCATTTTCATTGA+AGG + chr2_3:55220352-55220371 Msa0299940:intron 20.0%
!!! TTTATTTTGAAGCAAGAATA+TGG + chr2_3:55220399-55220418 Msa0299940:intron 20.0%
!! TGAAATGTATTAAATGACAT+TGG - chr2_3:55220432-55220451 None:intergenic 20.0%
!! AATACATTTCATGATCATAA+TGG + chr2_3:55220441-55220460 Msa0299940:intron 20.0%
!!! GTTTATTTTGGAATTACTTA+TGG + chr2_3:55220568-55220587 Msa0299940:intron 20.0%
!!! AATTTTTTTCAAGGAGTAAT+AGG - chr2_3:55221202-55221221 None:intergenic 20.0%
!! ACAGAGAATAATAAGAAAAA+GGG + chr2_3:55221456-55221475 Msa0299940:intron 20.0%
!! ATAAATTATGTGGTTTACTA+AGG - chr2_3:55221907-55221926 None:intergenic 20.0%
!!! ATGATGATTTATGACTATTT+TGG - chr2_3:55222375-55222394 None:intergenic 20.0%
!!! GTTTATATTTTATCTTGTTC+TGG - chr2_3:55222506-55222525 None:intergenic 20.0%
!! AAAACTCCTAATAAAAATCA+TGG + chr2_3:55223480-55223499 Msa0299940:intron 20.0%
!! AAACTCCTAATAAAAATCAT+GGG + chr2_3:55223481-55223500 Msa0299940:intron 20.0%
!! AATTTCCTCTATCAAAATAA+AGG + chr2_3:55223520-55223539 Msa0299940:intron 20.0%
!! AAAGATAAAACTATTTAGAG+AGG + chr2_3:55223660-55223679 Msa0299940:intron 20.0%
!! AAGATAAAACTATTTAGAGA+GGG + chr2_3:55223661-55223680 Msa0299940:intron 20.0%
!!! CTAACATTTTACTTATTCAT+AGG - chr2_3:55224102-55224121 None:intergenic 20.0%
!! AAAATGTAAATAGCTTCAAT+TGG - chr2_3:55224427-55224446 None:intergenic 20.0%
!! AAATTACATCAATTCATCAA+GGG - chr2_3:55224756-55224775 None:intergenic 20.0%
!! TAAATTACATCAATTCATCA+AGG - chr2_3:55224757-55224776 None:intergenic 20.0%
!!! AAATGAGACTTTTATTTGAT+AGG + chr2_3:55224891-55224910 Msa0299940:intron 20.0%
!!! AATGAGACTTTTATTTGATA+GGG + chr2_3:55224892-55224911 Msa0299940:intron 20.0%
!! TATTATTACTTGATGAATTG+GGG - chr2_3:55224926-55224945 None:intergenic 20.0%
!!! AGTATTTAAAAAGGTATGAT+TGG - chr2_3:55225207-55225226 None:intergenic 20.0%
!! GACTTACTTAAATTCTTTAA+TGG - chr2_3:55225541-55225560 None:intergenic 20.0%
!!! TTCTAAAACATCAAAAGAAA+AGG - chr2_3:55225739-55225758 None:intergenic 20.0%
!! ATTGAAAAGGAATTTAATTG+AGG + chr2_3:55226157-55226176 Msa0299940:intron 20.0%
!! AAAAGAGTAAATACAAATTG+AGG + chr2_3:55226184-55226203 Msa0299940:intron 20.0%
!!! ATATGAACAATATTTTTACG+AGG + chr2_3:55226629-55226648 Msa0299940:intron 20.0%
!!! AATTTGTTACTTAAAGTTGT+TGG - chr2_3:55226723-55226742 None:intergenic 20.0%
!!! TTGATTTTATTTTACAAGCA+TGG - chr2_3:55226760-55226779 None:intergenic 20.0%
!!! CTTCTAGAAAAAGAAAAAAT+TGG - chr2_3:55226992-55227011 None:intergenic 20.0%
!!! TTTTGAATTGAAAAGACAAA+CGG + chr2_3:55227233-55227252 Msa0299940:intron 20.0%
!!! TAAGTGATAAGAGTTTTTTT+TGG + chr2_3:55227376-55227395 Msa0299940:intron 20.0%
!! AGCTTATTCTTGTAAATATA+AGG + chr2_3:55227508-55227527 Msa0299940:intron 20.0%
!! GCTTATTCTTGTAAATATAA+GGG + chr2_3:55227509-55227528 Msa0299940:intron 20.0%
!! CTTATTCTTGTAAATATAAG+GGG + chr2_3:55227510-55227529 Msa0299940:intron 20.0%
!! TTTCATGTATATATGCAAAA+TGG + chr2_3:55227716-55227735 Msa0299940:intron 20.0%
!! TTCATGTATATATGCAAAAT+GGG + chr2_3:55227717-55227736 Msa0299940:intron 20.0%
!!! ATTTGTTGTAACAAAAATTC+GGG + chr2_3:55227971-55227990 Msa0299940:intron 20.0%
!! CATATATGTATATTCATTTG+AGG + chr2_3:55228171-55228190 Msa0299940:intron 20.0%
!!! ATGTCGTTTTTTTTTTTTAC+AGG - chr2_3:55228222-55228241 None:intergenic 20.0%
!! TGACAAAAATAAAGAGAAAA+TGG - chr2_3:55228558-55228577 None:intergenic 20.0%
!! CCTATATGAAATGAATATAT+AGG - chr2_3:55228756-55228775 None:intergenic 20.0%
!! CCTATATATTCATTTCATAT+AGG + chr2_3:55228753-55228772 Msa0299940:intron 20.0%
!!! TGTTATTTTTCATTTAATGC+AGG + chr2_3:55228821-55228840 Msa0299940:intron 20.0%
!!! ATTTCATGAATCTCTATTTT+TGG - chr2_3:55229008-55229027 None:intergenic 20.0%
!! AAAAATAGAGATTCATGAAA+TGG + chr2_3:55229007-55229026 Msa0299940:CDS 20.0%
!! AAAATAGAGATTCATGAAAT+GGG + chr2_3:55229008-55229027 Msa0299940:CDS 20.0%
!! AAAAGTTATATCATGGTTTA+TGG - chr2_3:55229499-55229518 None:intergenic 20.0%
!! AAAAACACGAAACTAAAAAA+TGG + chr2_3:55229674-55229693 Msa0299940:intron 20.0%
!!! ATTGATTCTTTTGCAAAATA+TGG - chr2_3:55229846-55229865 None:intergenic 20.0%
!! TTGTGTAAAAAAATGTTGAA+GGG - chr2_3:55229872-55229891 None:intergenic 20.0%
!! ATTGTGTAAAAAAATGTTGA+AGG - chr2_3:55229873-55229892 None:intergenic 20.0%
! GAAAGATAGTTGAGAAAAAT+AGG + chr2_3:55215249-55215268 Msa0299940:CDS 25.0%
! ATACATGTATATGAATGTGA+AGG - chr2_3:55215410-55215429 None:intergenic 25.0%
! TATTCATGTGAGGAATAAAT+CGG + chr2_3:55215433-55215452 Msa0299940:intron 25.0%
!! TGTTAAAACATTTTACACCA+AGG + chr2_3:55215506-55215525 Msa0299940:intron 25.0%
! AAAAAAAAAACATGGGTTCA+TGG - chr2_3:55215546-55215565 None:intergenic 25.0%
! AGAAAAAAGGAGAAGAAAAA+AGG - chr2_3:55215589-55215608 None:intergenic 25.0%
!!! TTTTCTTCTTTAATTTACCC+TGG + chr2_3:55215603-55215622 Msa0299940:intron 25.0%
! TAAAGAAAAACATGAATCCA+GGG - chr2_3:55215623-55215642 None:intergenic 25.0%
! TTAAAGAAAAACATGAATCC+AGG - chr2_3:55215624-55215643 None:intergenic 25.0%
!! TAAAGAGAATTTTGCTGAAT+TGG - chr2_3:55215740-55215759 None:intergenic 25.0%
! GCAAAATTCTCTTTAACATT+TGG + chr2_3:55215745-55215764 Msa0299940:intron 25.0%
! TGTTATGTTTCATTTAATGC+AGG + chr2_3:55216350-55216369 Msa0299940:intron 25.0%
! GACAAATATAAACTTAGCAA+AGG + chr2_3:55216434-55216453 Msa0299940:CDS 25.0%
! GAGAAGAAAGAAAGTTTAAT+GGG + chr2_3:55216456-55216475 Msa0299940:CDS 25.0%
! ATTTCATGAATCTCTATTTC+TGG - chr2_3:55216537-55216556 None:intergenic 25.0%
! AGAAATAGAGATTCATGAAA+TGG + chr2_3:55216536-55216555 Msa0299940:CDS 25.0%
! GAAATAGAGATTCATGAAAT+GGG + chr2_3:55216537-55216556 Msa0299940:CDS 25.0%
! TATCTCTTCAAATTCTTCTT+TGG + chr2_3:55216653-55216672 Msa0299940:CDS 25.0%
!! AATGTTATTTGCATGTGTAT+AGG - chr2_3:55216748-55216767 None:intergenic 25.0%
!!! GGAGTTTATTTTCTATAACA+TGG - chr2_3:55216981-55217000 None:intergenic 25.0%
! AAAAATCCCGAAACTAAAAA+TGG + chr2_3:55217020-55217039 Msa0299940:intron 25.0%
!!! TTAGTTCCATTTTTAGTTTC+GGG - chr2_3:55217029-55217048 None:intergenic 25.0%
!!! CTTAGTTCCATTTTTAGTTT+CGG - chr2_3:55217030-55217049 None:intergenic 25.0%
! TTCATTTATCCTCAAATCTA+AGG + chr2_3:55217603-55217622 Msa0299940:intron 25.0%
!!! TAAGCTAAAAAGTTTTAACC+TGG - chr2_3:55217651-55217670 None:intergenic 25.0%
!! ATTGATGATTCCTATATATC+AGG + chr2_3:55217872-55217891 Msa0299940:intron 25.0%
! AGGATGAAATTTCATAGAAT+TGG + chr2_3:55217917-55217936 Msa0299940:intron 25.0%
! GGATGAAATTTCATAGAATT+GGG + chr2_3:55217918-55217937 Msa0299940:intron 25.0%
!!! AAGCCATTAATTTTAATTGG+AGG + chr2_3:55218027-55218046 Msa0299940:intron 25.0%
!!! AGCCATTAATTTTAATTGGA+GGG + chr2_3:55218028-55218047 Msa0299940:intron 25.0%
!! GTCTTAACAATATTTTGTGA+AGG + chr2_3:55218180-55218199 Msa0299940:intron 25.0%
! TAGCATAGATATATCTATGA+GGG + chr2_3:55218457-55218476 Msa0299940:intron 25.0%
!! TGATCAAAGTACTTTGTAAA+AGG + chr2_3:55219046-55219065 Msa0299940:intron 25.0%
!! AAAACAGGTAAATTGTGTTT+TGG - chr2_3:55219135-55219154 None:intergenic 25.0%
!!! ACTGATCCTTTTATTTATCT+TGG + chr2_3:55219326-55219345 Msa0299940:intron 25.0%
! TGGATACCAAGATAAATAAA+AGG - chr2_3:55219335-55219354 None:intergenic 25.0%
! CTTGGTATCCATATATATAA+AGG + chr2_3:55219344-55219363 Msa0299940:intron 25.0%
! TCACTACTCCTTTATATATA+TGG - chr2_3:55219355-55219374 None:intergenic 25.0%
! GTCAAAAAGTTGTTAGAAAA+TGG + chr2_3:55219506-55219525 Msa0299940:intron 25.0%
! TCATTTCTCTATATAAAGGT+AGG + chr2_3:55219540-55219559 Msa0299940:intron 25.0%
!!! ATGGTGTTGATAAGATATAT+AGG - chr2_3:55219616-55219635 None:intergenic 25.0%
! ATATATCTTATCAACACCAT+TGG + chr2_3:55219616-55219635 Msa0299940:intron 25.0%
!! ATTTTATATCCACTACGAAA+TGG + chr2_3:55220085-55220104 Msa0299940:intron 25.0%
!! ACTTTAAAGATGTTACAGAA+AGG - chr2_3:55220532-55220551 None:intergenic 25.0%
! TTTATTACTCTTACCTACTA+GGG - chr2_3:55220876-55220895 None:intergenic 25.0%
! AGGTAAGAGTAATAAAGTAA+AGG + chr2_3:55220880-55220899 Msa0299940:intron 25.0%
! AGTTTAAAGAAGACAAGTAA+AGG + chr2_3:55220942-55220961 Msa0299940:intron 25.0%
! GTTTAAAGAAGACAAGTAAA+GGG + chr2_3:55220943-55220962 Msa0299940:intron 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - chr2_3:55220985-55221004 None:intergenic 25.0%
!!! TAAGCAAAAAACCACTTTTT+AGG + chr2_3:55220995-55221014 Msa0299940:intron 25.0%
! ATCATAATGAACCTAAAAAG+TGG - chr2_3:55221009-55221028 None:intergenic 25.0%
! ACGATTTCAAATCCAATATT+TGG + chr2_3:55221134-55221153 Msa0299940:intron 25.0%
!! GTATTAGCTTATTGTCTTAA+AGG + chr2_3:55221268-55221287 Msa0299940:intron 25.0%
! GACAGAGAATAATAAGAAAA+AGG + chr2_3:55221455-55221474 Msa0299940:intron 25.0%
! TTCTATTCAAGATTCAAACT+CGG + chr2_3:55221741-55221760 Msa0299940:intron 25.0%
! TGTACAAAGGATAAATTATG+TGG - chr2_3:55221917-55221936 None:intergenic 25.0%
! TACTATTTGTAGATGTACAA+AGG - chr2_3:55221930-55221949 None:intergenic 25.0%
! AATTACTTCAAAAACATGCA+GGG + chr2_3:55222011-55222030 Msa0299940:intron 25.0%
! ATATATTCTTAACTAAGCGA+GGG - chr2_3:55222070-55222089 None:intergenic 25.0%
! AATATATTCTTAACTAAGCG+AGG - chr2_3:55222071-55222090 None:intergenic 25.0%
! TTTAAATACTAGTACATGTG+TGG + chr2_3:55222093-55222112 Msa0299940:intron 25.0%
! AATTCAACAGATAATCACAA+AGG + chr2_3:55222324-55222343 Msa0299940:intron 25.0%
!!! TGACTATTTTGGATTATTGA+TGG - chr2_3:55222364-55222383 None:intergenic 25.0%
!!! TGTTCTGGATTTATTTTTTG+AGG - chr2_3:55222491-55222510 None:intergenic 25.0%
! TGAACTTAAGCATAACATTT+AGG + chr2_3:55222723-55222742 Msa0299940:intron 25.0%
!!! TTGTTATATCTAGTGTTGAT+GGG - chr2_3:55222845-55222864 None:intergenic 25.0%
!! ATTAAGTGTGATTTGATGAT+GGG - chr2_3:55222921-55222940 None:intergenic 25.0%
! TAATGTGAATGTGATGTAAA+TGG - chr2_3:55222944-55222963 None:intergenic 25.0%
! TTTGTTAAATATAGAAGGTC+TGG - chr2_3:55223320-55223339 None:intergenic 25.0%
! ATTTAACAAAAAATCTGGTC+TGG + chr2_3:55223330-55223349 Msa0299940:intron 25.0%
!!! CTTTTTATTGTTGTTATGGT+TGG - chr2_3:55223418-55223437 None:intergenic 25.0%
! CAACCATAACAACAATAAAA+AGG + chr2_3:55223416-55223435 Msa0299940:intron 25.0%
!!! ACTCCTTTTTATTGTTGTTA+TGG - chr2_3:55223422-55223441 None:intergenic 25.0%
!! TAAGTCCCATGATTTTTATT+AGG - chr2_3:55223489-55223508 None:intergenic 25.0%
!!! TGTAACCTTTATTTTGATAG+AGG - chr2_3:55223528-55223547 None:intergenic 25.0%
! AGATAAAACTATTTAGAGAG+GGG + chr2_3:55223662-55223681 Msa0299940:intron 25.0%
!! TTTTGATCTATGATTGTCAA+TGG + chr2_3:55223713-55223732 Msa0299940:intron 25.0%
! TCAAGTGATTATACTCTTTA+TGG + chr2_3:55223768-55223787 Msa0299940:intron 25.0%
!! TGTATCATTTTATATCAAGG+TGG + chr2_3:55223848-55223867 Msa0299940:intron 25.0%
! AATAAGACTATATCCAATTG+AGG + chr2_3:55224334-55224353 Msa0299940:intron 25.0%
! AAAATGTAAATTGCCTCAAT+TGG - chr2_3:55224350-55224369 None:intergenic 25.0%
! TGTCTAAAAACGTCTTAAAT+AGG + chr2_3:55224394-55224413 Msa0299940:intron 25.0%
! TATTTCATTTGGTCATTTGA+GGG - chr2_3:55224489-55224508 None:intergenic 25.0%
! TTATTTCATTTGGTCATTTG+AGG - chr2_3:55224490-55224509 None:intergenic 25.0%
!! CATCAATTAATTTGACCATT+TGG - chr2_3:55224513-55224532 None:intergenic 25.0%
! AATGGTCAAATTAATTGATG+TGG + chr2_3:55224513-55224532 Msa0299940:intron 25.0%
! ATTCATTTGTCATATCCATT+TGG - chr2_3:55224546-55224565 None:intergenic 25.0%
! AAATGGATATGACAAATGAA+TGG + chr2_3:55224545-55224564 Msa0299940:intron 25.0%
!!! ATGATTCGATTTTGAAATGA+AGG + chr2_3:55224623-55224642 Msa0299940:intron 25.0%
! AATTACATCAATTCATCAAG+GGG - chr2_3:55224755-55224774 None:intergenic 25.0%
! TCAAATCATATTTGTCGTTA+GGG - chr2_3:55224781-55224800 None:intergenic 25.0%
! ATCAAATCATATTTGTCGTT+AGG - chr2_3:55224782-55224801 None:intergenic 25.0%
! CGACAAATATGATTTGATTA+TGG + chr2_3:55224784-55224803 Msa0299940:intron 25.0%
! ATTATTACTTGATGAATTGG+GGG - chr2_3:55224925-55224944 None:intergenic 25.0%
! TATGAGTTGCTATATTCATT+TGG - chr2_3:55225005-55225024 None:intergenic 25.0%
!!! AGATATCTATTAAAGGCATT+GGG + chr2_3:55225487-55225506 Msa0299940:intron 25.0%
! AAACATCAAAAGAAAAGGAA+TGG - chr2_3:55225970-55225989 None:intergenic 25.0%
!! CACTAAAACATCAAAAGTTT+TGG - chr2_3:55225775-55225794 None:intergenic 25.0%
!! TTTATTGTGTTTTCCAACAA+GGG - chr2_3:55225824-55225843 None:intergenic 25.0%
! AGCTAAAACATCAAAAGAAA+AGG + chr2_3:55225965-55225984 Msa0299940:intron 25.0%
! AAACATCAAAAGAAAAGGAA+TGG + chr2_3:55225970-55225989 Msa0299940:intron 25.0%
!!! GTTGATTTGATGTATTGTTT+GGG - chr2_3:55226329-55226348 None:intergenic 25.0%
!!! AGTTGATTTGATGTATTGTT+TGG - chr2_3:55226330-55226349 None:intergenic 25.0%
! CATTATAAAATCGACGTATA+AGG + chr2_3:55226532-55226551 Msa0299940:intron 25.0%
! AAATACTGATACATTGTGAT+TGG - chr2_3:55226954-55226973 None:intergenic 25.0%
! ATAATACATGTTCGAATGAA+TGG - chr2_3:55227133-55227152 None:intergenic 25.0%
! TTCATTCGAACATGTATTAT+AGG + chr2_3:55227133-55227152 Msa0299940:intron 25.0%
!!! TTGATTTGGATTTAGAATTG+TGG - chr2_3:55227942-55227961 None:intergenic 25.0%
! TCTAAATCCAAATCAACTTT+AGG + chr2_3:55227946-55227965 Msa0299940:intron 25.0%
!! CAAATAACCTAAAGTTGATT+TGG - chr2_3:55227956-55227975 None:intergenic 25.0%
!! TTTGTTGTAACAAAAATTCG+GGG + chr2_3:55227972-55227991 Msa0299940:intron 25.0%
! TATATAGTTACCAATCTCAA+AGG - chr2_3:55228252-55228271 None:intergenic 25.0%
!!! AATTGGTTTTACATCAACAA+CGG - chr2_3:55228346-55228365 None:intergenic 25.0%
! TGTACATTCTAAGTGTAAAT+TGG - chr2_3:55228363-55228382 None:intergenic 25.0%
! AATTTACACTTAGAATGTAC+AGG + chr2_3:55228362-55228381 Msa0299940:intron 25.0%
! ATTTACACTTAGAATGTACA+GGG + chr2_3:55228363-55228382 Msa0299940:intron 25.0%
!! CTCGGTTCTAATATTAAAAA+TGG + chr2_3:55228407-55228426 Msa0299940:intron 25.0%
! CAAACATTATATTTGTCTCT+AGG - chr2_3:55228902-55228921 None:intergenic 25.0%
! AGAGAAGAAAGAAAGTTTAA+TGG + chr2_3:55228926-55228945 Msa0299940:CDS 25.0%
! GAGAAGAAAGAAAGTTTAAT+GGG + chr2_3:55216456-55216475 Msa0299940:CDS 25.0%
! TATCTCTTCAAATTCTTCTT+TGG + chr2_3:55216653-55216672 Msa0299940:CDS 25.0%
!! AATTTTTAACATGTGGCTTA+AGG - chr2_3:55229336-55229355 None:intergenic 25.0%
! ATATGTGACATTGTTCATTA+GGG - chr2_3:55229584-55229603 None:intergenic 25.0%
!!! TCCAAATTGAGTTTTTTTTG+AGG + chr2_3:55229625-55229644 Msa0299940:intron 25.0%
!!! CCAAATTGAGTTTTTTTTGA+GGG + chr2_3:55229626-55229645 Msa0299940:intron 25.0%
! CATATATTTATGCTTCATCA+AGG - chr2_3:55230141-55230160 None:intergenic 25.0%
AACTATCTTTCTTTCGACTT+TGG - chr2_3:55215240-55215259 None:intergenic 30.0%
TAGAAAAGAGGATCTTCATT+TGG - chr2_3:55215280-55215299 None:intergenic 30.0%
TCACCTTTGGATTATAGTTA+GGG - chr2_3:55215319-55215338 None:intergenic 30.0%
ATCACCTTTGGATTATAGTT+AGG - chr2_3:55215320-55215339 None:intergenic 30.0%
CATGTATGTATATTCATGTG+AGG + chr2_3:55215423-55215442 Msa0299940:intron 30.0%
! TGCATAACTCTTTGTTGTAT+TGG + chr2_3:55215463-55215482 Msa0299940:intron 30.0%
!!! TGAGATAGCTTTTTGATTTG+AGG + chr2_3:55215691-55215710 Msa0299940:intron 30.0%
!! AGAGCACTTCTTGTAATTTT+TGG + chr2_3:55215822-55215841 Msa0299940:intron 30.0%
TGTACAAAGTCAGAAAGAAA+AGG - chr2_3:55215956-55215975 None:intergenic 30.0%
TAGGGTTTAGTAATAAGAAG+AGG - chr2_3:55216280-55216299 None:intergenic 30.0%
AGGCAATAAACTACATAAAG+AGG + chr2_3:55216406-55216425 Msa0299940:CDS 30.0%
GGAGAAGAAAGAAAGTTTAA+TGG + chr2_3:55216455-55216474 Msa0299940:CDS 30.0%
TACAAGTGATAGTAACATGT+GGG + chr2_3:55216568-55216587 Msa0299940:CDS 30.0%
ATAGTGTGACATTGGTAAAT+TGG + chr2_3:55216921-55216940 Msa0299940:intron 30.0%
AGAGCACAATTTATAATGAG+AGG + chr2_3:55217307-55217326 Msa0299940:intron 30.0%
ATTTATAATGAGAGGATGAG+AGG + chr2_3:55217315-55217334 Msa0299940:intron 30.0%
AATCTGGAGATAAGAAACAA+TGG - chr2_3:55217546-55217565 None:intergenic 30.0%
! ATTGTTTCTTATCTCCAGAT+TGG + chr2_3:55217545-55217564 Msa0299940:intron 30.0%
AAAATTCATGTTGTCCAATC+TGG - chr2_3:55217562-55217581 None:intergenic 30.0%
TGAATCAATTCCTGTACAAA+TGG + chr2_3:55217770-55217789 Msa0299940:intron 30.0%
AAAAGCTCAACCTGATATAT+AGG - chr2_3:55217885-55217904 None:intergenic 30.0%
GACCCTCCAATTAAAATTAA+TGG - chr2_3:55218033-55218052 None:intergenic 30.0%
ATCTTATAATGAGAGATGAG+AGG - chr2_3:55218066-55218085 None:intergenic 30.0%
GATATATCTATGCTACATCA+AGG - chr2_3:55218452-55218471 None:intergenic 30.0%
GTAGCATAGATATATCTATG+AGG + chr2_3:55218456-55218475 Msa0299940:intron 30.0%
ATAGATATATCTATGAGGGT+CGG + chr2_3:55218461-55218480 Msa0299940:intron 30.0%
TGCATATGTTATACACACAT+GGG - chr2_3:55218656-55218675 None:intergenic 30.0%
TTGCATATGTTATACACACA+TGG - chr2_3:55218657-55218676 None:intergenic 30.0%
! CGAATTTTGTGTGTAGTATA+TGG + chr2_3:55218689-55218708 Msa0299940:intron 30.0%
AGTACTTTGTAAAAGGCTAT+TGG + chr2_3:55219053-55219072 Msa0299940:intron 30.0%
TACAACTTTCATGACAACTT+TGG + chr2_3:55219394-55219413 Msa0299940:intron 30.0%
!! TTGGTTTTCTCTCTTTTGAT+TGG + chr2_3:55219413-55219432 Msa0299940:intron 30.0%
AATACTAACGTACCTTATGT+CGG + chr2_3:55219565-55219584 Msa0299940:intron 30.0%
!!! TTTTTTCAACAACCGACATA+AGG - chr2_3:55219580-55219599 None:intergenic 30.0%
!!! GGTGGATTAAAATTTTTGTG+TGG + chr2_3:55219641-55219660 Msa0299940:intron 30.0%
TGGTTCAAGTGAAATATTGA+TGG + chr2_3:55219772-55219791 Msa0299940:intron 30.0%
AACTACAGGGAGATAAATTA+TGG - chr2_3:55220331-55220350 None:intergenic 30.0%
! ATTCCATTTTCATTGAAGGT+AGG + chr2_3:55220356-55220375 Msa0299940:intron 30.0%
AAACCTACCTTCAATGAAAA+TGG - chr2_3:55220362-55220381 None:intergenic 30.0%
! CCTAAGTTCATTCTTTCTTT+TGG - chr2_3:55220625-55220644 None:intergenic 30.0%
CCAAAAGAAAGAATGAACTT+AGG + chr2_3:55220622-55220641 Msa0299940:intron 30.0%
! ACAGCATTTTTCTATGGATT+GGG - chr2_3:55220691-55220710 None:intergenic 30.0%
! AGAAAGACAGCATTTTTCTA+TGG - chr2_3:55220697-55220716 None:intergenic 30.0%
AGAAACAAGAAGCTGAAAAA+TGG - chr2_3:55220720-55220739 None:intergenic 30.0%
GAAGAAAGAGCAAACAAAAA+AGG - chr2_3:55220744-55220763 None:intergenic 30.0%
CTTTATTACTCTTACCTACT+AGG - chr2_3:55220877-55220896 None:intergenic 30.0%
TAGAAGCTCTTTCCAAATAT+TGG - chr2_3:55221149-55221168 None:intergenic 30.0%
TTCTAGTAATGATTCTGTGA+AGG + chr2_3:55221164-55221183 Msa0299940:intron 30.0%
TCTAGTAATGATTCTGTGAA+GGG + chr2_3:55221165-55221184 Msa0299940:intron 30.0%
! CATTCTCTTCAGTTTTCAAA+AGG - chr2_3:55221351-55221370 None:intergenic 30.0%
!! CTTTTGAAAACTGAAGAGAA+TGG + chr2_3:55221349-55221368 Msa0299940:intron 30.0%
! AAAGAACTAGAAGGTATAGA+TGG + chr2_3:55221405-55221424 Msa0299940:intron 30.0%
ACATACAACACACAAAATGA+CGG - chr2_3:55221550-55221569 None:intergenic 30.0%
GAAAAACTTGCATCTTGAAA+AGG + chr2_3:55221610-55221629 Msa0299940:intron 30.0%
!! TTTTTAGCCCTCCAATTTAT+TGG + chr2_3:55221656-55221675 Msa0299940:intron 30.0%
! TTTTAGCCCTCCAATTTATT+GGG + chr2_3:55221657-55221676 Msa0299940:intron 30.0%
!! TTACTTGCTTTTAAGCGTAT+AGG - chr2_3:55221771-55221790 None:intergenic 30.0%
TCGTTATTAGCTAACTGTTT+AGG - chr2_3:55221838-55221857 None:intergenic 30.0%
!!! CTGCATGTTTTTGAAGTAAT+TGG - chr2_3:55222012-55222031 None:intergenic 30.0%
CAATTACTTCAAAAACATGC+AGG + chr2_3:55222010-55222029 Msa0299940:intron 30.0%
!!! TAACTGAGCTTGTTTTATCA+TGG - chr2_3:55222253-55222272 None:intergenic 30.0%
AATATTGTATTGGGGTTTGA+GGG - chr2_3:55222296-55222315 None:intergenic 30.0%
AAATATTGTATTGGGGTTTG+AGG - chr2_3:55222297-55222316 None:intergenic 30.0%
!!! CCTTTTTTGCTTTTGCTTTT+TGG - chr2_3:55222570-55222589 None:intergenic 30.0%
CCAAAAAGCAAAAGCAAAAA+AGG + chr2_3:55222567-55222586 Msa0299940:intron 30.0%
AAAAGCAAAAGCAAAAAAGG+AGG + chr2_3:55222570-55222589 Msa0299940:intron 30.0%
AGGAATTAAAACATCACACA+TGG + chr2_3:55222743-55222762 Msa0299940:intron 30.0%
GCATGTAATGATAGTATTTG+AGG - chr2_3:55222785-55222804 None:intergenic 30.0%
! CTTGTTATATCTAGTGTTGA+TGG - chr2_3:55222846-55222865 None:intergenic 30.0%
!! TTAAGTGTGATTTGATGATG+GGG - chr2_3:55222920-55222939 None:intergenic 30.0%
GATTAAGTGTGATTTGATGA+TGG - chr2_3:55222922-55222941 None:intergenic 30.0%
TGTGTATTTGAAGATGTGAA+AGG - chr2_3:55223047-55223066 None:intergenic 30.0%
GTAATTTAAGCTTGAGATGA+TGG - chr2_3:55223132-55223151 None:intergenic 30.0%
!! TTTAAATACGCCGACTTAAT+AGG + chr2_3:55223229-55223248 Msa0299940:intron 30.0%
!!! GCTTAAGAGGATTTTTTGAA+TGG + chr2_3:55223251-55223270 Msa0299940:intron 30.0%
! TCTGACCTTTTATGCTAAAT+AGG + chr2_3:55223281-55223300 Msa0299940:intron 30.0%
AGAAGCCTATTTAGCATAAA+AGG - chr2_3:55223289-55223308 None:intergenic 30.0%
!!! AGACATTAGAGTTTTAAACG+TGG + chr2_3:55223457-55223476 Msa0299940:intron 30.0%
! ATCTTTTCTTTGTGTCAGTT+TGG - chr2_3:55223646-55223665 None:intergenic 30.0%
ACATTGTGAAAATTCTTGAG+TGG + chr2_3:55223738-55223757 Msa0299940:intron 30.0%
AGTGATTATACTCTTTATGG+TGG + chr2_3:55223771-55223790 Msa0299940:intron 30.0%
! TTCTTTTGAACTATGATTGC+CGG + chr2_3:55223804-55223823 Msa0299940:intron 30.0%
!!! TTTGTTTTGATTGTTGTCAC+CGG - chr2_3:55223826-55223845 None:intergenic 30.0%
AAAATGGATCCTGTAATAAG+AGG + chr2_3:55223999-55224018 Msa0299940:intron 30.0%
GTGAGTATTATATTTGTGAG+TGG + chr2_3:55224061-55224080 Msa0299940:intron 30.0%
AAACTACCATTTGTATGTTG+GGG - chr2_3:55224240-55224259 None:intergenic 30.0%
GAAACTACCATTTGTATGTT+GGG - chr2_3:55224241-55224260 None:intergenic 30.0%
TGAAACTACCATTTGTATGT+TGG - chr2_3:55224242-55224261 None:intergenic 30.0%
GTAAATGAAAGTTCGAATCA+TGG + chr2_3:55224271-55224290 Msa0299940:intron 30.0%
CATTTGAGGGAATAAAAGAT+TGG - chr2_3:55224476-55224495 None:intergenic 30.0%
GACCAAATGAAATAACCAAA+TGG + chr2_3:55224495-55224514 Msa0299940:intron 30.0%
! GACCATTTGGTTATTTCATT+TGG - chr2_3:55224500-55224519 None:intergenic 30.0%
AATTCATCAAGAGGTAGTAT+AGG - chr2_3:55224576-55224595 None:intergenic 30.0%
TATACTACCTCTTGATGAAT+TGG + chr2_3:55224575-55224594 Msa0299940:intron 30.0%
TCGAATCATACTTGTCATTA+GGG - chr2_3:55224612-55224631 None:intergenic 30.0%
ATCGAATCATACTTGTCATT+AGG - chr2_3:55224613-55224632 None:intergenic 30.0%
!!! CGATTTTGAAATGAAGGATA+TGG + chr2_3:55224629-55224648 Msa0299940:intron 30.0%
TGATGTTCTTGAGATGAAAA+TGG + chr2_3:55224686-55224705 Msa0299940:intron 30.0%
CAAATCATATTTGTCGTTAG+GGG - chr2_3:55224780-55224799 None:intergenic 30.0%
GAAGATGGATAAGATGAAAA+TGG + chr2_3:55224840-55224859 Msa0299940:intron 30.0%
! AAAAGGTATGATTGGATTTG+TGG - chr2_3:55225199-55225218 None:intergenic 30.0%
ATGACACTGTAGATATAGAT+GGG - chr2_3:55225368-55225387 None:intergenic 30.0%
!!! TTTATTTTGTTAGGACGCAA+TGG + chr2_3:55225432-55225451 Msa0299940:intron 30.0%
! CAGATATCTATTAAAGGCAT+TGG + chr2_3:55225486-55225505 Msa0299940:intron 30.0%
GAGTAACTTTACATTGTGTT+TGG + chr2_3:55225591-55225610 Msa0299940:intron 30.0%
TGTTTGGTTGAAGAGAAATA+AGG + chr2_3:55225607-55225626 Msa0299940:intron 30.0%
ATCAAAAGAAAAGGAATGGA+GGG - chr2_3:55225974-55225993 None:intergenic 30.0%
! GTTTATTGTGTTTTCCAACA+AGG - chr2_3:55225825-55225844 None:intergenic 30.0%
ATTAAAGTAGTTGTGACCTT+TGG + chr2_3:55225846-55225865 Msa0299940:intron 30.0%
ATTCACATGTGATAAACCAA+AGG - chr2_3:55225865-55225884 None:intergenic 30.0%
TAAATGCAAGCAACATATGA+AGG - chr2_3:55226095-55226114 None:intergenic 30.0%
GAACAGGAAAACTATTGAAA+AGG + chr2_3:55226144-55226163 Msa0299940:intron 30.0%
TTTGGGAGAAGAGAAAAAAA+AGG - chr2_3:55226312-55226331 None:intergenic 30.0%
TGATATAGAGTCTATCATTG+CGG - chr2_3:55226479-55226498 None:intergenic 30.0%
TAAAATCGACGTATAAGGTA+AGG + chr2_3:55226537-55226556 Msa0299940:intron 30.0%
CCTAGTTGAAACACTTAATA+AGG - chr2_3:55226669-55226688 None:intergenic 30.0%
CCTTATTAAGTGTTTCAACT+AGG + chr2_3:55226666-55226685 Msa0299940:intron 30.0%
TATTAAGTGTTTCAACTAGG+TGG + chr2_3:55226669-55226688 Msa0299940:intron 30.0%
ATTAAGTGTTTCAACTAGGT+GGG + chr2_3:55226670-55226689 Msa0299940:intron 30.0%
!! CAAGTTTTGACATACGTTTT+TGG + chr2_3:55226693-55226712 Msa0299940:intron 30.0%
ATGACAACATAATCCACAAT+CGG + chr2_3:55226860-55226879 Msa0299940:intron 30.0%
TCATACAATAAGAACTAGCT+AGG - chr2_3:55227598-55227617 None:intergenic 30.0%
TGTATGATGAAGAAATGAAG+TGG + chr2_3:55227611-55227630 Msa0299940:intron 30.0%
TAGAAAAGAGGATCTTCATT+TGG - chr2_3:55215280-55215299 None:intergenic 30.0%
GAAATTAAACAGATCACCTT+TGG - chr2_3:55228136-55228155 None:intergenic 30.0%
ATATATGCATGTGAATGTGA+TGG - chr2_3:55228158-55228177 None:intergenic 30.0%
! TACATGACTCTTTGTTGTAT+TGG + chr2_3:55228310-55228329 Msa0299940:intron 30.0%
! AGTCTCCAATTTTATTGGAA+CGG - chr2_3:55228389-55228408 None:intergenic 30.0%
TTCCAATAAAATTGGAGACT+CGG + chr2_3:55228389-55228408 Msa0299940:intron 30.0%
!!! TTTTGTTGTTGATAGATGTG+TGG + chr2_3:55228516-55228535 Msa0299940:intron 30.0%
!! TTTGTTGTTGATAGATGTGT+GGG + chr2_3:55228517-55228536 Msa0299940:intron 30.0%
ATATATAGGTACTCTACTTG+TGG - chr2_3:55228742-55228761 None:intergenic 30.0%
TACAAGTGATTGTAACATGT+GGG + chr2_3:55229039-55229058 Msa0299940:intron 30.0%
! AATGTTATTTGCATGTGCAT+AGG - chr2_3:55229212-55229231 None:intergenic 30.0%
TACATTAATATGTGCCCTTA+GGG + chr2_3:55229456-55229475 Msa0299940:intron 30.0%
AATTCACCAATATTCCCTAA+GGG - chr2_3:55229473-55229492 None:intergenic 30.0%
AAATTCACCAATATTCCCTA+AGG - chr2_3:55229474-55229493 None:intergenic 30.0%
TTCATTAGGGTAAGAAATAG+CGG - chr2_3:55229571-55229590 None:intergenic 30.0%
CATATGTGACATTGTTCATT+AGG - chr2_3:55229585-55229604 None:intergenic 30.0%
CCCTCAAAAAAAACTCAATT+TGG - chr2_3:55229629-55229648 None:intergenic 30.0%
! AAACTCCAAATTGAGTTGTA+GGG + chr2_3:55229649-55229668 Msa0299940:intron 30.0%
! TTTTTCCCTACAACTCAATT+TGG - chr2_3:55229657-55229676 None:intergenic 30.0%
TTTATGCTTCATCAAGGAAT+TGG - chr2_3:55230135-55230154 None:intergenic 30.0%
ATGGATCATAATCAACAAGG+AGG + chr2_3:55215197-55215216 Msa0299940:CDS 35.0%
GAGAGTTGAGTTTAGAAAAG+AGG - chr2_3:55215292-55215311 None:intergenic 35.0%
TCTCCCTAACTATAATCCAA+AGG + chr2_3:55215313-55215332 Msa0299940:CDS 35.0%
GAAATTAAACAGATCGCCTT+TGG - chr2_3:55215388-55215407 None:intergenic 35.0%
! AACATTTTACACCAAGGTCT+TGG + chr2_3:55215512-55215531 Msa0299940:intron 35.0%
! ACATTTTACACCAAGGTCTT+GGG + chr2_3:55215513-55215532 Msa0299940:intron 35.0%
! AATTTTGCTGAATTGGAGAG+AGG - chr2_3:55215733-55215752 None:intergenic 35.0%
TTCCTATCTAATTGGAGACT+CGG - chr2_3:55216190-55216209 None:intergenic 35.0%
AGTCTCCAATTAGATAGGAA+CGG + chr2_3:55216190-55216209 Msa0299940:intron 35.0%
ATTCATGTCAATCCAAGAAG+AGG - chr2_3:55216313-55216332 None:intergenic 35.0%
TCATCTACTTGATCAGGTAA+TGG - chr2_3:55216387-55216406 None:intergenic 35.0%
ATTACCTGATCAAGTAGATG+AGG + chr2_3:55216386-55216405 Msa0299940:CDS 35.0%
TGTTACTATCACTTGTAGAG+TGG - chr2_3:55216565-55216584 None:intergenic 35.0%
CTACAAGTGATAGTAACATG+TGG + chr2_3:55216567-55216586 Msa0299940:CDS 35.0%
ACAAGTGATAGTAACATGTG+GGG + chr2_3:55216569-55216588 Msa0299940:CDS 35.0%
TCTTCAAATTCTTCTTTGGC+TGG + chr2_3:55216657-55216676 Msa0299940:CDS 35.0%
TATATATACCTGAGCAAGCA+CGG - chr2_3:55216700-55216719 None:intergenic 35.0%
TTTGCATGTGTATAGGTTTG+CGG - chr2_3:55216741-55216760 None:intergenic 35.0%
TAAACTCCAAACTGAGTTGT+AGG + chr2_3:55216993-55217012 Msa0299940:intron 35.0%
AAACTCCAAACTGAGTTGTA+GGG + chr2_3:55216994-55217013 Msa0299940:intron 35.0%
! TTTTACCCTACAACTCAGTT+TGG - chr2_3:55217002-55217021 None:intergenic 35.0%
TGACCATTGGATGAAAACAA+AGG + chr2_3:55217347-55217366 Msa0299940:intron 35.0%
GACCATTGGATGAAAACAAA+GGG + chr2_3:55217348-55217367 Msa0299940:intron 35.0%
TTAGCATGACCTTAGATTTG+AGG - chr2_3:55217615-55217634 None:intergenic 35.0%
!!! GCTAATCGTTTTGTTTTTCC+AGG + chr2_3:55217630-55217649 Msa0299940:intron 35.0%
! AATTGATTCACAATCGTGAG+AGG - chr2_3:55217760-55217779 None:intergenic 35.0%
!! CATGAGTATTGACTTCTCTA+TGG - chr2_3:55217820-55217839 None:intergenic 35.0%
! AACTCGTCAATTTTGTTGCT+TGG - chr2_3:55217845-55217864 None:intergenic 35.0%
! GAGCTTTTCGATTGGAAATA+AGG + chr2_3:55217897-55217916 Msa0299940:intron 35.0%
ATTGGGAGAAGAAAATGAAG+CGG + chr2_3:55217935-55217954 Msa0299940:intron 35.0%
TACAAAGAAAGAGGGATGAA+AGG + chr2_3:55217959-55217978 Msa0299940:intron 35.0%
CCAAATCGTAACAAAGATTG+CGG - chr2_3:55218284-55218303 None:intergenic 35.0%
! CGATTTGGAGAAACCAAAAT+AGG + chr2_3:55218296-55218315 Msa0299940:CDS 35.0%
! TTTCAATCTCTCGCCTATTT+TGG - chr2_3:55218312-55218331 None:intergenic 35.0%
!! AGATTGAAAGCATTTGTGGA+AGG + chr2_3:55218323-55218342 Msa0299940:CDS 35.0%
ATTTCAAGATCCCACAATTG+AGG - chr2_3:55218374-55218393 None:intergenic 35.0%
CAATTGTGGGATCTTGAAAT+TGG + chr2_3:55218374-55218393 Msa0299940:CDS 35.0%
TTGAAATTGGAAGTGAGAGT+TGG + chr2_3:55218387-55218406 Msa0299940:CDS 35.0%
TGAAATTGGAAGTGAGAGTT+GGG + chr2_3:55218388-55218407 Msa0299940:CDS 35.0%
! TCAAGGATTTGGTAAACTCT+TGG - chr2_3:55218435-55218454 None:intergenic 35.0%
TCTATGCTACATCAAGGATT+TGG - chr2_3:55218446-55218465 None:intergenic 35.0%
TTCTGGTGACTCTAAACAAT+CGG + chr2_3:55218590-55218609 Msa0299940:intron 35.0%
GGGGACTAAAAAACTAAAAC+AGG - chr2_3:55219150-55219169 None:intergenic 35.0%
CAAGAATTTCGGAGATCTTA+GGG - chr2_3:55219295-55219314 None:intergenic 35.0%
! TCCGAAATTCTTGGATCTTT+TGG + chr2_3:55219302-55219321 Msa0299940:intron 35.0%
GCCAAAAGATCCAAGAATTT+CGG - chr2_3:55219306-55219325 None:intergenic 35.0%
GACATAAGGTACGTTAGTAT+TGG - chr2_3:55219566-55219585 None:intergenic 35.0%
!! AATTTTAATCCACCAGCCAA+TGG - chr2_3:55219635-55219654 None:intergenic 35.0%
GAATGGAAGGAACTATGTTA+TGG - chr2_3:55219747-55219766 None:intergenic 35.0%
!! AATGACAGAGTGTTGAAACA+CGG - chr2_3:55219922-55219941 None:intergenic 35.0%
! ATTCTCTCCGGTGTTAATTT+AGG - chr2_3:55220260-55220279 None:intergenic 35.0%
TTTGTGTACTACAACTAGTG+CGG - chr2_3:55220308-55220327 None:intergenic 35.0%
! GACAGCATTTTTCTATGGAT+TGG - chr2_3:55220692-55220711 None:intergenic 35.0%
ATGTACTTAAACACAAGAGC+AGG + chr2_3:55220797-55220816 Msa0299940:intron 35.0%
AGTAAGAAAGTTACCCTAGT+AGG + chr2_3:55220860-55220879 Msa0299940:intron 35.0%
ATGATAGACGTGACTTAGTT+AGG + chr2_3:55221024-55221043 Msa0299940:intron 35.0%
GTTAGGAAACTTTAACCTCA+TGG + chr2_3:55221041-55221060 Msa0299940:intron 35.0%
CTTTAACCTCATGGAGAATA+AGG + chr2_3:55221050-55221069 Msa0299940:intron 35.0%
AAGACAATAAGCTAATACGC+AGG - chr2_3:55221266-55221285 None:intergenic 35.0%
TGAAAACTGAAGAGAATGGA+TGG + chr2_3:55221353-55221372 Msa0299940:intron 35.0%
TTTCACACCATGTCTTACTT+TGG - chr2_3:55221388-55221407 None:intergenic 35.0%
CATACAACACACAAAATGAC+GGG - chr2_3:55221549-55221568 None:intergenic 35.0%
TTTAGCCCTCCAATTTATTG+GGG + chr2_3:55221658-55221677 Msa0299940:intron 35.0%
AAGCCAACTCCAAATTACTA+GGG - chr2_3:55221692-55221711 None:intergenic 35.0%
TAAGCCAACTCCAAATTACT+AGG - chr2_3:55221693-55221712 None:intergenic 35.0%
TTCTATTCAAGACCCAAACT+CGG + chr2_3:55221808-55221827 Msa0299940:intron 35.0%
TGAAATACTGCCTAATACAC+CGG + chr2_3:55222146-55222165 Msa0299940:intron 35.0%
TGTGTTATGTCACATGTTGT+AGG - chr2_3:55222177-55222196 None:intergenic 35.0%
ACATCATCTATGAGAACTCT+TGG + chr2_3:55222462-55222481 Msa0299940:intron 35.0%
CATCATCTATGAGAACTCTT+GGG + chr2_3:55222463-55222482 Msa0299940:intron 35.0%
!!! TTTGCTTTTTGGAGTCTTAG+TGG - chr2_3:55222559-55222578 None:intergenic 35.0%
CAAAAGCAAAAAAGGAGGAT+AGG + chr2_3:55222575-55222594 Msa0299940:intron 35.0%
ATGTATATCTTACCTTCCAG+TGG - chr2_3:55222686-55222705 None:intergenic 35.0%
TCCTCTTAAGCCTATTAAGT+CGG - chr2_3:55223242-55223261 None:intergenic 35.0%
!!! AGGATTTTTTGAATGGCATG+TGG + chr2_3:55223258-55223277 Msa0299940:intron 35.0%
! GTCTTGTAATTTGGTAGTTC+AGG - chr2_3:55223385-55223404 None:intergenic 35.0%
GTTGGTTGTGTCTTGTAATT+TGG - chr2_3:55223394-55223413 None:intergenic 35.0%
! ATTGTTGTTATGGTTGGTGT+TGG - chr2_3:55223412-55223431 None:intergenic 35.0%
ATAGATCAAAAGAACCCTAG+AGG - chr2_3:55223704-55223723 None:intergenic 35.0%
!! CTTTAAGGCATGAGGTATAT+GGG - chr2_3:55224142-55224161 None:intergenic 35.0%
!! ACTTTAAGGCATGAGGTATA+TGG - chr2_3:55224143-55224162 None:intergenic 35.0%
! TACCTCATGCCTTAAAGTTT+TGG + chr2_3:55224145-55224164 Msa0299940:intron 35.0%
!! ATCCAAAACTTTAAGGCATG+AGG - chr2_3:55224150-55224169 None:intergenic 35.0%
!!! TCATGCCTTAAAGTTTTGGA+TGG + chr2_3:55224149-55224168 Msa0299940:intron 35.0%
CATCTCCATCCAAAACTTTA+AGG - chr2_3:55224157-55224176 None:intergenic 35.0%
!!! TAAAGTTTTGGATGGAGATG+TGG + chr2_3:55224157-55224176 Msa0299940:intron 35.0%
TGCTCCAAGACTTCAAAAAA+CGG - chr2_3:55224188-55224207 None:intergenic 35.0%
ACGTCATTAGACACTAAATG+TGG - chr2_3:55224310-55224329 None:intergenic 35.0%
ATTACCTCCAATTCATCAAG+AGG - chr2_3:55224585-55224604 None:intergenic 35.0%
CGAATCATACTTGTCATTAG+GGG - chr2_3:55224611-55224630 None:intergenic 35.0%
TGATTATGGAACGAAAGAGA+TGG + chr2_3:55224798-55224817 Msa0299940:intron 35.0%
CACATGTTGAATGAAGAAGA+TGG + chr2_3:55224825-55224844 Msa0299940:intron 35.0%
TGACACTGTAGATATAGATG+GGG - chr2_3:55225367-55225386 None:intergenic 35.0%
GATGACACTGTAGATATAGA+TGG - chr2_3:55225369-55225388 None:intergenic 35.0%
!! CTATTAAAGGCATTGGGTTT+AGG + chr2_3:55225493-55225512 Msa0299940:intron 35.0%
AGAGAGAAATAGAGAAGAGA+TGG + chr2_3:55225645-55225664 Msa0299940:intron 35.0%
CATCAAAAGAAAAGGAATGG+AGG - chr2_3:55225973-55225992 None:intergenic 35.0%
TTTCTCAAGTTTACCCTTGT+TGG + chr2_3:55225808-55225827 Msa0299940:intron 35.0%
! AGCTCTTGACACAAGTTTTA+AGG - chr2_3:55225949-55225968 None:intergenic 35.0%
CATCAAAAGAAAAGGAATGG+AGG + chr2_3:55225973-55225992 Msa0299940:intron 35.0%
TTTGGGGAGAAGTTAAAAAG+TGG - chr2_3:55226014-55226033 None:intergenic 35.0%
!!! TTTTAACTTCTCCCCAAAGT+AGG + chr2_3:55226016-55226035 Msa0299940:intron 35.0%
! TTTAACTTCTCCCCAAAGTA+GGG + chr2_3:55226017-55226036 Msa0299940:intron 35.0%
TTCCATTTCTTCCCTACTTT+GGG - chr2_3:55226031-55226050 None:intergenic 35.0%
! TTTTCCTGTTCAAGTACCAT+TGG - chr2_3:55226135-55226154 None:intergenic 35.0%
GAGAAGTTAACAAGAGAGAA+AGG - chr2_3:55226365-55226384 None:intergenic 35.0%
GAAGTTGTGAAGAGAGAAAT+AGG - chr2_3:55226393-55226412 None:intergenic 35.0%
ATACTATTAGGTTTGATGCG+TGG + chr2_3:55226436-55226455 Msa0299940:intron 35.0%
GTTTGATGCGTGGATATAAA+TGG + chr2_3:55226446-55226465 Msa0299940:intron 35.0%
!! GTTTTGACATACGTTTTTGG+TGG + chr2_3:55226696-55226715 Msa0299940:intron 35.0%
!! CCAAAAAGTGCAACTTTTTC+CGG + chr2_3:55227323-55227342 Msa0299940:intron 35.0%
TCAACTGAGTTATGCTTACA+TGG + chr2_3:55227450-55227469 Msa0299940:intron 35.0%
! TAGCTAGGAACATTCTAAGA+AGG - chr2_3:55227583-55227602 None:intergenic 35.0%
!!! GTGGAGGATATTTGTTTTTG+TGG - chr2_3:55227649-55227668 None:intergenic 35.0%
TGTGTGGTACGTAAAAGTTT+GGG - chr2_3:55227788-55227807 None:intergenic 35.0%
AACATTACACAAGAGTGATG+AGG - chr2_3:55227813-55227832 None:intergenic 35.0%
! GATTTAGAATTGTGGTGAGA+AGG - chr2_3:55227934-55227953 None:intergenic 35.0%
!! AAATTCGGGGTACTTTTCAA+TGG + chr2_3:55227985-55228004 Msa0299940:intron 35.0%
TCAATGGATCAAAATCAGCA+AGG + chr2_3:55228001-55228020 Msa0299940:intron 35.0%
AACGATCTTTCTTTCGACTT+TGG - chr2_3:55228044-55228063 None:intergenic 35.0%
GAGAGTTGAGTTTAGAAAAG+AGG - chr2_3:55215292-55215311 None:intergenic 35.0%
TCACCTTTGGATTATAGCTA+GGG - chr2_3:55228123-55228142 None:intergenic 35.0%
ATCACCTTTGGATTATAGCT+AGG - chr2_3:55228124-55228143 None:intergenic 35.0%
!! CATTGAGTTTCCTTTGAGAT+TGG + chr2_3:55228239-55228258 Msa0299940:intron 35.0%
! AACCGAGTCTCCAATTTTAT+TGG - chr2_3:55228394-55228413 None:intergenic 35.0%
GAGTATAATTGTTGGGATCT+AGG - chr2_3:55228625-55228644 None:intergenic 35.0%
TAATTGAGGACCCCATAAAT+TGG + chr2_3:55228658-55228677 Msa0299940:intron 35.0%
CATATAGGTTCACTTCTTCT+TGG + chr2_3:55228768-55228787 Msa0299940:intron 35.0%
TCATCTACTTGATCAGGTAA+TGG - chr2_3:55216387-55216406 None:intergenic 35.0%
ATTACCTGATCAAGTAGATG+AGG + chr2_3:55216386-55216405 Msa0299940:CDS 35.0%
GTTACAATCACTTGTAGAGT+GGG - chr2_3:55229035-55229054 None:intergenic 35.0%
TGTTACAATCACTTGTAGAG+TGG - chr2_3:55229036-55229055 None:intergenic 35.0%
CTACAAGTGATTGTAACATG+TGG + chr2_3:55229038-55229057 Msa0299940:intron 35.0%
ACAAGTGATTGTAACATGTG+GGG + chr2_3:55229040-55229059 Msa0299940:intron 35.0%
TCTTCAAATTCTTCTTTGGC+TGG + chr2_3:55216657-55216676 Msa0299940:CDS 35.0%
TATATATACCTGAGCATGCA+CGG - chr2_3:55229171-55229190 None:intergenic 35.0%
!! TTTTTGTGTTCGAGTTTCAC+TGG + chr2_3:55216783-55216802 Msa0299940:intron 35.0%
AGTCACGAGTTAAGTTTGTA+GGG - chr2_3:55229285-55229304 None:intergenic 35.0%
AAGTCACGAGTTAAGTTTGT+AGG - chr2_3:55229286-55229305 None:intergenic 35.0%
GTACATTAATATGTGCCCTT+AGG + chr2_3:55229455-55229474 Msa0299940:intron 35.0%
! GAAACTCCAAATTGAGTTGT+AGG + chr2_3:55229648-55229667 Msa0299940:intron 35.0%
CCAAATCGTAACAAAGATTG+CGG - chr2_3:55218284-55218303 None:intergenic 35.0%
! CGATTTGGAGAAACCAAAAT+AGG + chr2_3:55218296-55218315 Msa0299940:CDS 35.0%
! TTTCAATCTCTCGCCTATTT+TGG - chr2_3:55218312-55218331 None:intergenic 35.0%
!! AGATTGAAAGCATTTGTGGA+AGG + chr2_3:55218323-55218342 Msa0299940:CDS 35.0%
ATTTCAAGATCCCAGAATTG+AGG - chr2_3:55230063-55230082 None:intergenic 35.0%
!! CAATTCTGGGATCTTGAAAT+TGG + chr2_3:55230063-55230082 Msa0299940:CDS 35.0%
TTGAAATTGGAAGTGAGAGT+TGG + chr2_3:55218387-55218406 Msa0299940:CDS 35.0%
TGAAATTGGAAGTGAGAGTT+GGG + chr2_3:55218388-55218407 Msa0299940:CDS 35.0%
TCAAGGAATTGGTAAACTCT+TGG - chr2_3:55230124-55230143 None:intergenic 35.0%
TCGACTTTGGTTGAAGAACA+AGG - chr2_3:55215227-55215246 None:intergenic 40.0%
ACACACACACAAATCACCTT+TGG - chr2_3:55215332-55215351 None:intergenic 40.0%
!! TCTTTGTTGTATTGGCTAGC+TGG + chr2_3:55215471-55215490 Msa0299940:intron 40.0%
!! CTTTGTTGTATTGGCTAGCT+GGG + chr2_3:55215472-55215491 Msa0299940:intron 40.0%
TGGAATAAAACCCAAGACCT+TGG - chr2_3:55215526-55215545 None:intergenic 40.0%
AACCGAGTCTCCAATTAGAT+AGG + chr2_3:55216185-55216204 Msa0299940:intron 40.0%
!! TAGCTAAGTTGGTGGAAGTT+AGG - chr2_3:55216223-55216242 None:intergenic 40.0%
TGTGATCAGCATAGCTAAGT+TGG - chr2_3:55216234-55216253 None:intergenic 40.0%
AGAAGAGGTGATAGGGTTTA+GGG - chr2_3:55216298-55216317 None:intergenic 40.0%
AAGAAGAGGTGATAGGGTTT+AGG - chr2_3:55216299-55216318 None:intergenic 40.0%
TAAACCCTATCACCTCTTCT+TGG + chr2_3:55216298-55216317 Msa0299940:intron 40.0%
CAATCCAAGAAGAGGTGATA+GGG - chr2_3:55216305-55216324 None:intergenic 40.0%
TCAATCCAAGAAGAGGTGAT+AGG - chr2_3:55216306-55216325 None:intergenic 40.0%
ATTGCCTCATCTACTTGATC+AGG - chr2_3:55216393-55216412 None:intergenic 40.0%
! GTTCGAGTTTCACTAGTTTC+AGG + chr2_3:55216790-55216809 Msa0299940:intron 40.0%
! TAAGCCACGAGTTAAGTTGT+CGG - chr2_3:55216823-55216842 None:intergenic 40.0%
GAGGAGTAAATGATGACCAT+TGG + chr2_3:55217334-55217353 Msa0299940:intron 40.0%
!!! GTCCCTTTGTTTTCATCCAA+TGG - chr2_3:55217353-55217372 None:intergenic 40.0%
GTATGTGGGCATCTTAAATC+TGG - chr2_3:55217375-55217394 None:intergenic 40.0%
! GAAAAGGTGTGTAGATGAAG+AGG - chr2_3:55217432-55217451 None:intergenic 40.0%
GCAAGACAGAACAAGAAAAG+AGG - chr2_3:55217492-55217511 None:intergenic 40.0%
!! GAGTATTGACTTCTCTATGG+TGG - chr2_3:55217817-55217836 None:intergenic 40.0%
!!! ATCAGGTTGAGCTTTTCGAT+TGG + chr2_3:55217889-55217908 Msa0299940:intron 40.0%
TGAAGCGGTTACAAAGAAAG+AGG + chr2_3:55217950-55217969 Msa0299940:intron 40.0%
GAAGCGGTTACAAAGAAAGA+GGG + chr2_3:55217951-55217970 Msa0299940:intron 40.0%
CCGCAATCTTTGTTACGATT+TGG + chr2_3:55218281-55218300 Msa0299940:CDS 40.0%
!! CGAGAGATTGAAAGCATTTG+TGG + chr2_3:55218319-55218338 Msa0299940:CDS 40.0%
CCAAGAATTTCGGAGATCTT+AGG - chr2_3:55219296-55219315 None:intergenic 40.0%
CCTAAGATCTCCGAAATTCT+TGG + chr2_3:55219293-55219312 Msa0299940:intron 40.0%
ATCTTATCAACACCATTGGC+TGG + chr2_3:55219620-55219639 Msa0299940:intron 40.0%
TCGTAAACTTCGTTGGAAGT+TGG + chr2_3:55219705-55219724 Msa0299940:intron 40.0%
TAGTTCCTTCCATTCTCAAC+TGG + chr2_3:55219752-55219771 Msa0299940:intron 40.0%
TTGAACCAGTTGAGAATGGA+AGG - chr2_3:55219760-55219779 None:intergenic 40.0%
TCACTTGAACCAGTTGAGAA+TGG - chr2_3:55219764-55219783 None:intergenic 40.0%
TGTCCAATTCCTATAGCTTG+TGG + chr2_3:55219808-55219827 Msa0299940:intron 40.0%
! CAATTCCTATAGCTTGTGGA+GGG + chr2_3:55219812-55219831 Msa0299940:intron 40.0%
! AATTCCTATAGCTTGTGGAG+GGG + chr2_3:55219813-55219832 Msa0299940:intron 40.0%
TGGAGGGGATATAAGAACTT+TGG + chr2_3:55219828-55219847 Msa0299940:intron 40.0%
! TCTTTTCAGCCATTTCGTAG+TGG - chr2_3:55220097-55220116 None:intergenic 40.0%
ACTACGAAATGGCTGAAAAG+AGG + chr2_3:55220096-55220115 Msa0299940:intron 40.0%
TAGCCCACCTAAATTAACAC+CGG + chr2_3:55220250-55220269 Msa0299940:intron 40.0%
! TCTCCGGTGTTAATTTAGGT+GGG - chr2_3:55220256-55220275 None:intergenic 40.0%
TGAAGGTAGGTTTCAGAACA+TGG + chr2_3:55220369-55220388 Msa0299940:intron 40.0%
CTGCAGAAAACATGATGTGA+GGG - chr2_3:55220480-55220499 None:intergenic 40.0%
ACTGCAGAAAACATGATGTG+AGG - chr2_3:55220481-55220500 None:intergenic 40.0%
TGCTTATAAATGTGACCGGA+GGG - chr2_3:55220981-55221000 None:intergenic 40.0%
TTGCTTATAAATGTGACCGG+AGG - chr2_3:55220982-55221001 None:intergenic 40.0%
TAGCTTCCTTATTCTCCATG+AGG - chr2_3:55221059-55221078 None:intergenic 40.0%
TTACTACCACTTTCCAGTGA+TGG - chr2_3:55221096-55221115 None:intergenic 40.0%
TGAAGAGAATGGATGGAATG+TGG + chr2_3:55221360-55221379 Msa0299940:intron 40.0%
GAAGAGAATGGATGGAATGT+GGG + chr2_3:55221361-55221380 Msa0299940:intron 40.0%
CATGGTGTGAAAGAACTAGA+AGG + chr2_3:55221396-55221415 Msa0299940:intron 40.0%
AAGAAAAAGGGTGAAGCGTA+TGG + chr2_3:55221468-55221487 Msa0299940:intron 40.0%
! GTGTTGTATGTAGCCTTACT+CGG + chr2_3:55221559-55221578 Msa0299940:intron 40.0%
TGATATGCTTCATCCGAGTA+AGG - chr2_3:55221575-55221594 None:intergenic 40.0%
ACTCGGATGAAGCATATCAA+AGG + chr2_3:55221576-55221595 Msa0299940:intron 40.0%
TGGAGGGCTAAAAAAAAACG+TGG - chr2_3:55221650-55221669 None:intergenic 40.0%
TTAGCCCTCCAATTTATTGG+GGG + chr2_3:55221659-55221678 Msa0299940:intron 40.0%
CATTCCCCCAATAAATTGGA+GGG - chr2_3:55221666-55221685 None:intergenic 40.0%
AGCCAACTCCAAATTACTAG+GGG - chr2_3:55221691-55221710 None:intergenic 40.0%
TGTTTAGGAGAACCGAGTTT+GGG - chr2_3:55221823-55221842 None:intergenic 40.0%
GGTAGTGCATAGTATTTGAG+TGG + chr2_3:55222114-55222133 Msa0299940:intron 40.0%
GCATAGTATTTGAGTGGTAG+TGG + chr2_3:55222120-55222139 Msa0299940:intron 40.0%
TCACATGTTGTAGGCATTTC+CGG - chr2_3:55222168-55222187 None:intergenic 40.0%
! GTTTTATCATGGAGACAACG+TGG - chr2_3:55222242-55222261 None:intergenic 40.0%
TCTACACCACATAGTGATGT+AGG + chr2_3:55222649-55222668 Msa0299940:intron 40.0%
ACCTCAGACAGCTCAATAAA+TGG + chr2_3:55223930-55223949 Msa0299940:intron 40.0%
ACCATTTATTGAGCTGTCTG+AGG - chr2_3:55223934-55223953 None:intergenic 40.0%
ATGGTATCATAGCCCTGATT+CGG + chr2_3:55223949-55223968 Msa0299940:intron 40.0%
! AGCGGGAGTTGATCTTAAAA+TGG + chr2_3:55223983-55224002 Msa0299940:intron 40.0%
ATGGATCCTGTAATAAGAGG+TGG + chr2_3:55224002-55224021 Msa0299940:intron 40.0%
ATCAGTCCACCTCTTATTAC+AGG - chr2_3:55224011-55224030 None:intergenic 40.0%
!! AAGAGGTGGACTGATAATTG+TGG + chr2_3:55224016-55224035 Msa0299940:intron 40.0%
!! AGAGGTGGACTGATAATTGT+GGG + chr2_3:55224017-55224036 Msa0299940:intron 40.0%
!!! GTCTCCGTTTTTTGAAGTCT+TGG + chr2_3:55224181-55224200 Msa0299940:intron 40.0%
ACTACCTCTTGATGAATTGG+AGG + chr2_3:55224578-55224597 Msa0299940:intron 40.0%
AAGAAAAAACCCTACCAGTG+AGG + chr2_3:55224720-55224739 Msa0299940:intron 40.0%
AGAAAAAACCCTACCAGTGA+GGG + chr2_3:55224721-55224740 Msa0299940:intron 40.0%
TATGATTGGATTTGTGGTGC+TGG - chr2_3:55225193-55225212 None:intergenic 40.0%
ACACTGTAGATATAGATGGG+GGG - chr2_3:55225365-55225384 None:intergenic 40.0%
GACACTGTAGATATAGATGG+GGG - chr2_3:55225366-55225385 None:intergenic 40.0%
AATGCATGCACAGTAAGAAG+TGG - chr2_3:55225403-55225422 None:intergenic 40.0%
!! TTAAAGGCATTGGGTTTAGG+TGG + chr2_3:55225496-55225515 Msa0299940:intron 40.0%
!! TAAAGGCATTGGGTTTAGGT+GGG + chr2_3:55225497-55225516 Msa0299940:intron 40.0%
! GATGGTAGTTTTCTCTTGCT+TGG + chr2_3:55225663-55225682 Msa0299940:intron 40.0%
AAAGGAATGGAGGAAGTAGT+AGG + chr2_3:55225983-55226002 Msa0299940:intron 40.0%
TCCATTTCTTCCCTACTTTG+GGG - chr2_3:55226030-55226049 None:intergenic 40.0%
CTTCCATTTCTTCCCTACTT+TGG - chr2_3:55226032-55226051 None:intergenic 40.0%
CAAGCAACATATGAAGGCAA+TGG - chr2_3:55226089-55226108 None:intergenic 40.0%
! GTGATTAGTTGCAACACCAA+TGG + chr2_3:55226116-55226135 Msa0299940:intron 40.0%
AACACCAATGGTACTTGAAC+AGG + chr2_3:55226128-55226147 Msa0299940:intron 40.0%
AATCCACAATCGGAAGAAGA+TGG + chr2_3:55226870-55226889 Msa0299940:intron 40.0%
ATCCACAATCGGAAGAAGAT+GGG + chr2_3:55226871-55226890 Msa0299940:intron 40.0%
ACATGTTCGAATGAATGGTG+AGG - chr2_3:55227128-55227147 None:intergenic 40.0%
CTGAAAATGACATCAAGTCG+TGG + chr2_3:55227287-55227306 Msa0299940:intron 40.0%
!! GCACTTTTTGGACCACTTTT+TGG - chr2_3:55227314-55227333 None:intergenic 40.0%
! CCGGAAAAAGTTGCACTTTT+TGG - chr2_3:55227326-55227345 None:intergenic 40.0%
TACGTAAAAGTTTGGGAGTG+AGG - chr2_3:55227781-55227800 None:intergenic 40.0%
GTGTGTGGTACGTAAAAGTT+TGG - chr2_3:55227789-55227808 None:intergenic 40.0%
GTGGTGAGAAGGTTATGATA+AGG - chr2_3:55227923-55227942 None:intergenic 40.0%
CTTTCGACTTTGGTTGAAGA+AGG - chr2_3:55215230-55215249 None:intergenic 40.0%
TCTCCCTAGCTATAATCCAA+AGG + chr2_3:55228117-55228136 Msa0299940:CDS 40.0%
!! TCTTTGTTGTATTGGCTAGC+TGG + chr2_3:55215471-55215490 Msa0299940:intron 40.0%
!! CTTTGTTGTATTGGCTAGCT+GGG + chr2_3:55215472-55215491 Msa0299940:intron 40.0%
! TGTTGATAGATGTGTGGGTT+TGG + chr2_3:55228522-55228541 Msa0299940:intron 40.0%
! GTTGATAGATGTGTGGGTTT+GGG + chr2_3:55228523-55228542 Msa0299940:intron 40.0%
GGGGTACGAGTATAATTGTT+GGG - chr2_3:55228632-55228651 None:intergenic 40.0%
! AGGGGTACGAGTATAATTGT+TGG - chr2_3:55228633-55228652 None:intergenic 40.0%
CGTACCCCTACAAATAATTG+AGG + chr2_3:55228644-55228663 Msa0299940:intron 40.0%
GGGTCCTCAATTATTTGTAG+GGG - chr2_3:55228651-55228670 None:intergenic 40.0%
GGGGTCCTCAATTATTTGTA+GGG - chr2_3:55228652-55228671 None:intergenic 40.0%
TGGGGTCCTCAATTATTTGT+AGG - chr2_3:55228653-55228672 None:intergenic 40.0%
CTTGTGGTATAGTACACTCA+AGG - chr2_3:55228726-55228745 None:intergenic 40.0%
ATTGCCTCATCTACTTGATC+AGG - chr2_3:55216393-55216412 None:intergenic 40.0%
GGAAATAAGAGATCACGTGA+TGG + chr2_3:55228948-55228967 Msa0299940:CDS 40.0%
AATAAGAGATCACGTGATGG+TGG + chr2_3:55228951-55228970 Msa0299940:CDS 40.0%
TATGTGCCCTTAGGGAATAT+TGG + chr2_3:55229464-55229483 Msa0299940:intron 40.0%
CCGCAATCTTTGTTACGATT+TGG + chr2_3:55218281-55218300 Msa0299940:CDS 40.0%
!! CGAGAGATTGAAAGCATTTG+TGG + chr2_3:55218319-55218338 Msa0299940:CDS 40.0%
CTGAATTGGAGAGAGGATTG+AGG - chr2_3:55215726-55215745 None:intergenic 45.0%
! GATCAGCATAGCTAAGTTGG+TGG - chr2_3:55216231-55216250 None:intergenic 45.0%
ATGGGAAAGAAGAGATCACG+TGG + chr2_3:55216474-55216493 Msa0299940:CDS 45.0%
ACTGCATGAAGAGAACGTTG+AGG + chr2_3:55216629-55216648 Msa0299940:CDS 45.0%
GCACGGTATGAAGAAGTGAA+TGG - chr2_3:55216683-55216702 None:intergenic 45.0%
! AAGCCACGAGTTAAGTTGTC+GGG - chr2_3:55216822-55216841 None:intergenic 45.0%
CGCGTAGACTGAGAAAACAA+AGG - chr2_3:55217409-55217428 None:intergenic 45.0%
TGATTCACAATCGTGAGAGG+AGG - chr2_3:55217757-55217776 None:intergenic 45.0%
!! AAGAGGGATGAAAGGTGCTT+TGG + chr2_3:55217967-55217986 Msa0299940:intron 45.0%
GCTTTGGTTGTGTAGAGAAG+AGG + chr2_3:55217983-55218002 Msa0299940:intron 45.0%
TGGAAACACAGCCTCAATTG+TGG + chr2_3:55218360-55218379 Msa0299940:CDS 45.0%
GGAAACACAGCCTCAATTGT+GGG + chr2_3:55218361-55218380 Msa0299940:CDS 45.0%
TGGGTAACTATGAGCATCTG+CGG - chr2_3:55218637-55218656 None:intergenic 45.0%
! TTATCAACACCATTGGCTGG+TGG + chr2_3:55219623-55219642 Msa0299940:intron 45.0%
CTTCCAACGAAGTTTACGAG+TGG - chr2_3:55219704-55219723 None:intergenic 45.0%
CCTCCACAAGCTATAGGAAT+TGG - chr2_3:55219814-55219833 None:intergenic 45.0%
! CCAATTCCTATAGCTTGTGG+AGG + chr2_3:55219811-55219830 Msa0299940:intron 45.0%
ATATCCCCTCCACAAGCTAT+AGG - chr2_3:55219820-55219839 None:intergenic 45.0%
! CTTTCACTCAAGAGCACACA+AGG + chr2_3:55219864-55219883 Msa0299940:intron 45.0%
! CTCTCCGGTGTTAATTTAGG+TGG - chr2_3:55220257-55220276 None:intergenic 45.0%
ATCTCCTGTTCGATTCTCTC+CGG - chr2_3:55220272-55220291 None:intergenic 45.0%
CTTAAACACAAGAGCAGGCT+AGG + chr2_3:55220802-55220821 Msa0299940:intron 45.0%
AGGCTAGGAGTAAGTTATGC+AGG + chr2_3:55220817-55220836 Msa0299940:intron 45.0%
GGGTTAATCAATACTCCCTC+CGG + chr2_3:55220963-55220982 Msa0299940:intron 45.0%
ATCACCTCCAAATCCATCAC+TGG + chr2_3:55221080-55221099 Msa0299940:intron 45.0%
!! CTTTCCAGTGATGGATTTGG+AGG - chr2_3:55221087-55221106 None:intergenic 45.0%
!! CCACTTTCCAGTGATGGATT+TGG - chr2_3:55221090-55221109 None:intergenic 45.0%
CCAAATCCATCACTGGAAAG+TGG + chr2_3:55221087-55221106 Msa0299940:intron 45.0%
TGTGGGACCAAAGTAAGACA+TGG + chr2_3:55221378-55221397 Msa0299940:intron 45.0%
GTTCCAAACCTTACGTATGC+GGG - chr2_3:55221521-55221540 None:intergenic 45.0%
CGTTCCAAACCTTACGTATG+CGG - chr2_3:55221522-55221541 None:intergenic 45.0%
CGCATACGTAAGGTTTGGAA+CGG + chr2_3:55221520-55221539 Msa0299940:intron 45.0%
! GCATACGTAAGGTTTGGAAC+GGG + chr2_3:55221521-55221540 Msa0299940:intron 45.0%
CCATTCCCCCAATAAATTGG+AGG - chr2_3:55221667-55221686 None:intergenic 45.0%
CCTCCAATTTATTGGGGGAA+TGG + chr2_3:55221664-55221683 Msa0299940:intron 45.0%
GGTCCATTCCCCCAATAAAT+TGG - chr2_3:55221670-55221689 None:intergenic 45.0%
GGAATGGACCCCTAGTAATT+TGG + chr2_3:55221680-55221699 Msa0299940:intron 45.0%
! GACCCCTAGTAATTTGGAGT+TGG + chr2_3:55221686-55221705 Msa0299940:intron 45.0%
CTGTTTAGGAGAACCGAGTT+TGG - chr2_3:55221824-55221843 None:intergenic 45.0%
AACCCACTTGAAGCTGTATG+TGG + chr2_3:55222037-55222056 Msa0299940:intron 45.0%
ACCCACTTGAAGCTGTATGT+GGG + chr2_3:55222038-55222057 Msa0299940:intron 45.0%
GTAGGCATTTCCGGTGTATT+AGG - chr2_3:55222159-55222178 None:intergenic 45.0%
! TAGTGGCTGAGCTCTGATTA+GGG - chr2_3:55222542-55222561 None:intergenic 45.0%
! TTAGTGGCTGAGCTCTGATT+AGG - chr2_3:55222543-55222562 None:intergenic 45.0%
ACTATGTGGTGTAGACATGC+AGG - chr2_3:55222644-55222663 None:intergenic 45.0%
CTTACCTTCCAGTGGTTGTT+TGG - chr2_3:55222678-55222697 None:intergenic 45.0%
!! TGATGATGGGGATGAAGTTG+AGG - chr2_3:55222908-55222927 None:intergenic 45.0%
! GCCGACTTAATAGGCTTAAG+AGG + chr2_3:55223238-55223257 Msa0299940:intron 45.0%
ACAAAAAATCTGGTCTGGCC+TGG + chr2_3:55223335-55223354 Msa0299940:intron 45.0%
ACACCACATTCTCACCTCTA+GGG + chr2_3:55223687-55223706 Msa0299940:intron 45.0%
GAGGTCACAGGAGAAACAAT+GGG - chr2_3:55223915-55223934 None:intergenic 45.0%
TGAGGTCACAGGAGAAACAA+TGG - chr2_3:55223916-55223935 None:intergenic 45.0%
!! GAGGTGGACTGATAATTGTG+GGG + chr2_3:55224018-55224037 Msa0299940:intron 45.0%
!! AGGTGGACTGATAATTGTGG+GGG + chr2_3:55224019-55224038 Msa0299940:intron 45.0%
GTGTGAGGGTTACGAAACAA+TGG - chr2_3:55224216-55224235 None:intergenic 45.0%
! TTGTATGTTGGGGAGTGTGA+GGG - chr2_3:55224230-55224249 None:intergenic 45.0%
! TTTGTATGTTGGGGAGTGTG+AGG - chr2_3:55224231-55224250 None:intergenic 45.0%
CACACTCCCCAACATACAAA+TGG + chr2_3:55224231-55224250 Msa0299940:intron 45.0%
TGATGTGGCAACTCACCAAA+TGG + chr2_3:55224528-55224547 Msa0299940:intron 45.0%
TAACTTAGCCCTCACTGGTA+GGG - chr2_3:55224732-55224751 None:intergenic 45.0%
!! TGTGGTGCTGGTAGTGTATT+TGG - chr2_3:55225181-55225200 None:intergenic 45.0%
GTAGATATAGATGGGGGGAA+TGG - chr2_3:55225360-55225379 None:intergenic 45.0%
GGGGAGAAGTTAAAAAGTGG+TGG - chr2_3:55226011-55226030 None:intergenic 45.0%
TCCCCAAAGTAGGGAAGAAA+TGG + chr2_3:55226026-55226045 Msa0299940:intron 45.0%
TTCCCATCTTCTTCCGATTG+TGG - chr2_3:55226876-55226895 None:intergenic 45.0%
!! TTTTGATTGGACCTTGCACG+CGG - chr2_3:55227166-55227185 None:intergenic 45.0%
TCAAGTCGTGGTCCAAAAAG+TGG + chr2_3:55227299-55227318 Msa0299940:intron 45.0%
CAGGGCCGTTCCAATAAAAT+TGG + chr2_3:55228381-55228400 Msa0299940:intron 45.0%
TTGAGGACCCCATAAATTGG+AGG + chr2_3:55228661-55228680 Msa0299940:intron 45.0%
!! GTTCGAGTTTCACTGGTTTC+AGG + chr2_3:55229254-55229273 Msa0299940:intron 45.0%
TGGAAACACAGCCTCAATTC+TGG + chr2_3:55230049-55230068 Msa0299940:CDS 45.0%
GGAAACACAGCCTCAATTCT+GGG + chr2_3:55230050-55230069 Msa0299940:CDS 45.0%
!! ATATATATATATATATATAG+AGG + chr2_3:55217272-55217291 Msa0299940:intron 5.0%
!! TATATATGTATATATATATA+GGG - chr2_3:55218109-55218128 None:intergenic 5.0%
!! ATATATATGTATATATATAT+AGG - chr2_3:55218110-55218129 None:intergenic 5.0%
!! TTATTATTAAATATTGTATT+GGG - chr2_3:55222305-55222324 None:intergenic 5.0%
!! TTTATTATTAAATATTGTAT+TGG - chr2_3:55222306-55222325 None:intergenic 5.0%
!!! AATATATTTGTTAATAAAAA+AGG + chr2_3:55225121-55225140 Msa0299940:intron 5.0%
!!! TTTTATTTATTTATTTTGTT+AGG + chr2_3:55225423-55225442 Msa0299940:intron 5.0%
!!! TTTTATATTAAATAATATGA+TGG + chr2_3:55227084-55227103 Msa0299940:intron 5.0%
!!! ATCATTAATTATTTTTATTA+GGG - chr2_3:55228434-55228453 None:intergenic 5.0%
!!! TATCATTAATTATTTTTATT+AGG - chr2_3:55228435-55228454 None:intergenic 5.0%
CAGGGCCGTTCCTATCTAAT+TGG - chr2_3:55216198-55216217 None:intergenic 50.0%
CAATTAGATAGGAACGGCCC+TGG + chr2_3:55216196-55216215 Msa0299940:intron 50.0%
! GTTGGTGGAAGTTAGGACCA+GGG - chr2_3:55216216-55216235 None:intergenic 50.0%
!! AGTTGGTGGAAGTTAGGACC+AGG - chr2_3:55216217-55216236 None:intergenic 50.0%
GGAAAGAAGAGATCACGTGG+TGG + chr2_3:55216477-55216496 Msa0299940:CDS 50.0%
AAGAAGAGATCACGTGGTGG+TGG + chr2_3:55216480-55216499 Msa0299940:CDS 50.0%
TCTTCATACCGTGCTTGCTC+AGG + chr2_3:55216689-55216708 Msa0299940:CDS 50.0%
TTCCCCGACAACTTAACTCG+TGG + chr2_3:55216816-55216835 Msa0299940:intron 50.0%
! AGCCACGAGTTAAGTTGTCG+GGG - chr2_3:55216821-55216840 None:intergenic 50.0%
AGGCACGTGCACATGTATGT+GGG - chr2_3:55217389-55217408 None:intergenic 50.0%
AAGGCACGTGCACATGTATG+TGG - chr2_3:55217390-55217409 None:intergenic 50.0%
CTGTGTTTCCACATCGCTCA+CGG - chr2_3:55218351-55218370 None:intergenic 50.0%
! ACTCTAAACAATCGGTGCCC+TGG + chr2_3:55218598-55218617 Msa0299940:intron 50.0%
AACTATGAGCATCTGCGGGA+GGG - chr2_3:55218632-55218651 None:intergenic 50.0%
TAACTATGAGCATCTGCGGG+AGG - chr2_3:55218633-55218652 None:intergenic 50.0%
GGGTAACTATGAGCATCTGC+GGG - chr2_3:55218636-55218655 None:intergenic 50.0%
CTGCCACTCGTAAACTTCGT+TGG + chr2_3:55219698-55219717 Msa0299940:intron 50.0%
!! AGAGTGTTGAAACACGGAGG+AGG - chr2_3:55219916-55219935 None:intergenic 50.0%
!! GACAGAGTGTTGAAACACGG+AGG - chr2_3:55219919-55219938 None:intergenic 50.0%
AACACCGGAGAGAATCGAAC+AGG + chr2_3:55220265-55220284 Msa0299940:intron 50.0%
AAGGGTGAAGCGTATGGAGA+TGG + chr2_3:55221474-55221493 Msa0299940:intron 50.0%
CTAAAGCTCCCGCATACGTA+AGG + chr2_3:55221510-55221529 Msa0299940:intron 50.0%
GCCCACATACAGCTTCAAGT+GGG - chr2_3:55222042-55222061 None:intergenic 50.0%
TTGAAGCTGTATGTGGGCCT+TGG + chr2_3:55222044-55222063 Msa0299940:intron 50.0%
TCTTAACTAAGCGAGGGCCA+AGG - chr2_3:55222064-55222083 None:intergenic 50.0%
GATAGGCATCAAGCCATCCT+CGG + chr2_3:55222592-55222611 Msa0299940:intron 50.0%
ATAGGCATCAAGCCATCCTC+GGG + chr2_3:55222593-55222612 Msa0299940:intron 50.0%
TGGTGTAGACATGCAGGTTG+AGG - chr2_3:55222638-55222657 None:intergenic 50.0%
TGGTCGCCTACATCACTATG+TGG - chr2_3:55222658-55222677 None:intergenic 50.0%
GACACCACATTCTCACCTCT+AGG + chr2_3:55223686-55223705 Msa0299940:intron 50.0%
GAACCCTAGAGGTGAGAATG+TGG - chr2_3:55223693-55223712 None:intergenic 50.0%
! ATTGAGCTGTCTGAGGTCAC+AGG - chr2_3:55223927-55223946 None:intergenic 50.0%
!! ATAGCCCTGATTCGGCTTGA+TGG + chr2_3:55223957-55223976 Msa0299940:intron 50.0%
!! TAGCCCTGATTCGGCTTGAT+GGG + chr2_3:55223958-55223977 Msa0299940:intron 50.0%
GGAGCGCACATGTTGAATGA+AGG + chr2_3:55224650-55224669 Msa0299940:intron 50.0%
GTAACTTAGCCCTCACTGGT+AGG - chr2_3:55224733-55224752 None:intergenic 50.0%
TCTCTGTTCTGTCGGGTAAG+TGG - chr2_3:55227668-55227687 None:intergenic 50.0%
ACTTACCCGACAGAACAGAG+AGG + chr2_3:55227667-55227686 Msa0299940:intron 50.0%
TTGCCTCCTCTCTGTTCTGT+CGG - chr2_3:55227676-55227695 None:intergenic 50.0%
! TGCAAAATGGGTGCTGTCTG+AGG + chr2_3:55227729-55227748 Msa0299940:intron 50.0%
CAAGAGTGATGAGGTGTGTG+TGG - chr2_3:55227804-55227823 None:intergenic 50.0%
GACCCCATAAATTGGAGGTC+CGG + chr2_3:55228666-55228685 Msa0299940:intron 50.0%
AGCCGGACCTCCAATTTATG+GGG - chr2_3:55228671-55228690 None:intergenic 50.0%
GAGCCGGACCTCCAATTTAT+GGG - chr2_3:55228672-55228691 None:intergenic 50.0%
ACTGCATGAAGAGAACGTCG+AGG + chr2_3:55229100-55229119 Msa0299940:intron 50.0%
TCTTCATACCGTGCATGCTC+AGG + chr2_3:55229160-55229179 Msa0299940:intron 50.0%
CTGTGTTTCCACATCGCTCA+CGG - chr2_3:55218351-55218370 None:intergenic 50.0%
TGAAACACGGAGGAGGACGA+TGG - chr2_3:55219909-55219928 None:intergenic 55.0%
GCTCCCGCATACGTAAGGTT+TGG + chr2_3:55221515-55221534 Msa0299940:intron 55.0%
GGCCCACATACAGCTTCAAG+TGG - chr2_3:55222043-55222062 None:intergenic 55.0%
! GCAGGTTGAGGACGCTTGAT+CGG - chr2_3:55222626-55222645 None:intergenic 55.0%
GTAGGCGACCAAACAACCAC+TGG + chr2_3:55222667-55222686 Msa0299940:intron 55.0%
GCGACCAAACAACCACTGGA+AGG + chr2_3:55222671-55222690 Msa0299940:intron 55.0%
GCGTGTCATAGACTAGGCGT+AGG + chr2_3:55223357-55223376 Msa0299940:intron 55.0%
TGTGACTCCTCCCTCTCATG+CGG + chr2_3:55223874-55223893 Msa0299940:intron 55.0%
TGCTTCACGACCGCATGAGA+GGG - chr2_3:55223887-55223906 None:intergenic 55.0%
ATGCTTCACGACCGCATGAG+AGG - chr2_3:55223888-55223907 None:intergenic 55.0%
!! AGCCCTGATTCGGCTTGATG+GGG + chr2_3:55223959-55223978 Msa0299940:intron 55.0%
TCCCCCATCAAGCCGAATCA+GGG - chr2_3:55223964-55223983 None:intergenic 55.0%
AGGGGTAACTTAGCCCTCAC+TGG - chr2_3:55224737-55224756 None:intergenic 55.0%
TAGGAGTCATACCGCGTGCA+AGG + chr2_3:55227152-55227171 Msa0299940:intron 55.0%
CTGTTCTGTCGGGTAAGTGG+AGG - chr2_3:55227665-55227684 None:intergenic 55.0%
TACCCGACAGAACAGAGAGG+AGG + chr2_3:55227670-55227689 Msa0299940:intron 55.0%
TGCCTCCTCTCTGTTCTGTC+GGG - chr2_3:55227675-55227694 None:intergenic 55.0%
GGGAGTGAGGTCAACATGCA+TGG - chr2_3:55227768-55227787 None:intergenic 55.0%
GGAGCCGGACCTCCAATTTA+TGG - chr2_3:55228673-55228692 None:intergenic 55.0%
TCCTTGCGCTTGCCAAGGAA+CGG + chr2_3:55228700-55228719 Msa0299940:intron 55.0%
GTACACTCAAGGCCGTTCCT+TGG - chr2_3:55228715-55228734 None:intergenic 55.0%
GGTGGCTGCTCGAGTTCTTC+TGG + chr2_3:55216498-55216517 Msa0299940:CDS 60.0%
GGAAGGATCCGTGAGCGATG+TGG + chr2_3:55218340-55218359 Msa0299940:CDS 60.0%
GGCCTGGCGTGTCATAGACT+AGG + chr2_3:55223351-55223370 Msa0299940:intron 60.0%
CGCCTAGTCTATGACACGCC+AGG - chr2_3:55223356-55223375 None:intergenic 60.0%
TTCACGACCGCATGAGAGGG+AGG - chr2_3:55223884-55223903 None:intergenic 60.0%
!! GCCCTGATTCGGCTTGATGG+GGG + chr2_3:55223960-55223979 Msa0299940:intron 60.0%
CTCCCCCATCAAGCCGAATC+AGG - chr2_3:55223965-55223984 None:intergenic 60.0%
! GATTCGGCTTGATGGGGGAG+CGG + chr2_3:55223965-55223984 Msa0299940:intron 60.0%
! ATTCGGCTTGATGGGGGAGC+GGG + chr2_3:55223966-55223985 Msa0299940:intron 60.0%
GGCAAGCGCAAGGAGCTCTA+CGG - chr2_3:55228694-55228713 None:intergenic 60.0%
AGAGCTCCTTGCGCTTGCCA+AGG + chr2_3:55228695-55228714 Msa0299940:intron 60.0%
GGTGGCTGCTCGAGTTCTTC+TGG + chr2_3:55216498-55216517 Msa0299940:CDS 60.0%
GGAAGGATCCGTGAGCGATG+TGG + chr2_3:55218340-55218359 Msa0299940:CDS 60.0%
GCGGGAGGGACGACTATCCA+GGG - chr2_3:55218618-55218637 None:intergenic 65.0%
TGCGGGAGGGACGACTATCC+AGG - chr2_3:55218619-55218638 None:intergenic 65.0%
ATCGGCGTGAGTCCCGAGGA+TGG - chr2_3:55222608-55222627 None:intergenic 65.0%
CTTGATCGGCGTGAGTCCCG+AGG - chr2_3:55222612-55222631 None:intergenic 65.0%
CGCAAGGAGCTCTACGGAGC+CGG - chr2_3:55228688-55228707 None:intergenic 65.0%
GCCGTTCCTTGGCAAGCGCA+AGG - chr2_3:55228704-55228723 None:intergenic 65.0%
CGGAGGAGGACGATGGCGAG+AGG - chr2_3:55219902-55219921 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 55215197 55230167 55215197 ID=Msa0299940;Name=Msa0299940
chr2_3 mRNA 55215197 55230167 55215197 ID=Msa0299940-mRNA-1;Parent=Msa0299940;Name=Msa0299940-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.2|0.16|1|0.6|0.5|6|24|374
chr2_3 exon 55215197 55215334 55215197 ID=Msa0299940-mRNA-1:exon:17641;Parent=Msa0299940-mRNA-1
chr2_3 exon 55216372 55216710 55216372 ID=Msa0299940-mRNA-1:exon:17642;Parent=Msa0299940-mRNA-1
chr2_3 exon 55218278 55218427 55218278 ID=Msa0299940-mRNA-1:exon:17643;Parent=Msa0299940-mRNA-1
chr2_3 exon 55228019 55228138 55228019 ID=Msa0299940-mRNA-1:exon:17644;Parent=Msa0299940-mRNA-1
chr2_3 exon 55228843 55229043 55228843 ID=Msa0299940-mRNA-1:exon:17645;Parent=Msa0299940-mRNA-1
chr2_3 exon 55229967 55230167 55229967 ID=Msa0299940-mRNA-1:exon:17646;Parent=Msa0299940-mRNA-1
chr2_3 CDS 55215197 55215334 55215197 ID=Msa0299940-mRNA-1:cds;Parent=Msa0299940-mRNA-1
chr2_3 CDS 55216372 55216710 55216372 ID=Msa0299940-mRNA-1:cds;Parent=Msa0299940-mRNA-1
chr2_3 CDS 55218278 55218427 55218278 ID=Msa0299940-mRNA-1:cds;Parent=Msa0299940-mRNA-1
chr2_3 CDS 55228019 55228138 55228019 ID=Msa0299940-mRNA-1:cds;Parent=Msa0299940-mRNA-1
chr2_3 CDS 55228843 55229043 55228843 ID=Msa0299940-mRNA-1:cds;Parent=Msa0299940-mRNA-1
chr2_3 CDS 55229967 55230143 55229967 ID=Msa0299940-mRNA-1:cds;Parent=Msa0299940-mRNA-1
chr2_3 three_prime_UTR 55230144 55230167 55230144 ID=Msa0299940-mRNA-1:three_prime_utr;Parent=Msa0299940-mRNA-1
Gene Sequence

>Msa0299940

ATGGATCATAATCAACAAGGAGGTCGACCTTGTTCTTCAACCAAAGTCGAAAGAAAGATAGTTGAGAAAAATAGGAGAAACCAAATGAAGATCCTCTTTTCTAAACTCAACTCTCTTCTCCCTAACTATAATCCAAAGGAATTAGCGTTACCATTACCTGATCAAGTAGATGAGGCAATAAACTACATAAAGAGGCTAGAGACAAATATAAACTTAGCAAAGGAGAAGAAAGAAAGTTTAATGGGAAAGAAGAGATCACGTGGTGGTGGCTGCTCGAGTTCTTCTGGAGCAATAAAGTTGCCAGAAATAGAGATTCATGAAATGGGAACCACTCTACAAGTGATAGTAACATGTGGGGTTGATGACCATTTTATTTTCTGTGAAATCATGAGAATACTGCATGAAGAGAACGTTGAGGTTATCTCTTCAAATTCTTCTTTGGCTGGCCATTCACTTCTTCATACCGTGCTTGCTCAGATTCCGCAATCTTTGTTACGATTTGGAGAAACCAAAATAGGCGAGAGATTGAAAGCATTTGTGGAAGGATCCGTGAGCGATGTGGAAACACAGCCTCAATTGTGGGATCTTGAAATTGGAAGTGAGAGTTGGGAGCTTCTACATTCTGTACAAGGAGCTCAACCTTCTTCAACCAAAGTCGAAAGAAAGATCGTTGAGAAAAATAGAAGAAACCAAATGAAGATCCTCTTTTCTAAACTCAACTCTCTTCTCCCTAGCTATAATCCAAAGGAATTAGCGTTACCATTACCTGATCAAGTAGATGAGGCAATAAACTACATAAAGAGCCTAGAGACAAATATAATGTTTGCAAAAGAGAAGAAAGAAAGTTTAATGGGAAATAAGAGATCACGTGATGGTGGCTGCTCGAGTTCTTCTGGAGCAATAAAGTTGCCAAAAATAGAGATTCATGAAATGGGACCCACTCTACAAATTCCGCAATCTTTGTTACGATTTGGAGAAACCAAAATAGGCGAGAGATTGAAAGCATTTGTGGAAGGATCCGTGAGCGATGTGGAAACACAGCCTCAATTCTGGGATCTTGAAATTGGAAGTGAGAGTTGGGAGCTTCTACATTCTGTAGTAACCAAGAGTTTACCAATTCCTTGA

Protein sequence

>Msa0299940

MDHNQQGGRPCSSTKVERKIVEKNRRNQMKILFSKLNSLLPNYNPKELALPLPDQVDEAINYIKRLETNINLAKEKKESLMGKKRSRGGGCSSSSGAIKLPEIEIHEMGTTLQVIVTCGVDDHFIFCEIMRILHEENVEVISSNSSLAGHSLLHTVLAQIPQSLLRFGETKIGERLKAFVEGSVSDVETQPQLWDLEIGSESWELLHSVQGAQPSSTKVERKIVEKNRRNQMKILFSKLNSLLPSYNPKELALPLPDQVDEAINYIKSLETNIMFAKEKKESLMGNKRSRDGGCSSSSGAIKLPKIEIHEMGPTLQIPQSLLRFGETKIGERLKAFVEGSVSDVETQPQFWDLEIGSESWELLHSVVTKSLPIP*