AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0301010

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0301010 MtrunA17_Chr2g0326361 93.730 319 19 1 1 319 1 318 0.0 608
Msa0301010 MtrunA17_Chr7g0263931 48.182 330 140 5 10 319 7 325 4.21e-95 285
Msa0301010 MtrunA17_Chr5g0417791 66.471 170 55 1 14 183 3 170 1.87e-82 250
Msa0301010 MtrunA17_Chr4g0042561 65.318 173 58 1 8 180 3 173 1.04e-80 246
Msa0301010 MtrunA17_Chr2g0318101 64.815 162 50 1 14 168 15 176 5.47e-79 244
Msa0301010 MtrunA17_Chr4g0047841 63.483 178 46 2 14 172 15 192 3.17e-78 242
Msa0301010 MtrunA17_Chr7g0252971 65.714 175 51 4 14 180 8 181 4.73e-78 241
Msa0301010 MtrunA17_Chr3g0124761 64.780 159 52 2 10 168 3 157 4.94e-72 224
Msa0301010 MtrunA17_Chr8g0384721 54.595 185 74 2 14 191 7 188 1.56e-69 218
Msa0301010 MtrunA17_Chr2g0318081 58.537 164 62 2 10 173 12 169 2.59e-67 214
Msa0301010 MtrunA17_Chr8g0359921 60.976 164 60 2 10 173 10 169 4.51e-66 210
Msa0301010 MtrunA17_Chr3g0130731 60.000 155 58 2 14 168 7 157 1.02e-64 206
Msa0301010 MtrunA17_Chr5g0417001 50.000 178 85 2 1 174 1 178 5.08e-59 194
Msa0301010 MtrunA17_Chr8g0361731 50.867 173 80 2 1 168 1 173 8.60e-57 188
Msa0301010 MtrunA17_Chr6g0453131 50.847 177 78 3 16 187 17 189 1.78e-54 182
Msa0301010 MtrunA17_Chr3g0139331 45.813 203 102 4 4 205 2 197 1.71e-53 178
Msa0301010 MtrunA17_Chr1g0147421 46.602 206 89 5 1 203 15 202 4.29e-53 178
Msa0301010 MtrunA17_Chr6g0481091 48.810 168 78 3 14 179 6 167 1.29e-52 173
Msa0301010 MtrunA17_Chr2g0309891 50.633 158 71 3 13 168 5 157 1.34e-52 176
Msa0301010 MtrunA17_Chr2g0316971 54.194 155 69 1 14 168 23 175 3.19e-52 176
Msa0301010 MtrunA17_Chr6g0453451 50.000 168 80 2 8 175 14 177 3.72e-52 174
Msa0301010 MtrunA17_Chr6g0484441 50.625 160 71 2 14 173 5 156 1.65e-51 172
Msa0301010 MtrunA17_Chr7g0214071 53.947 152 61 2 14 165 15 157 3.09e-51 170
Msa0301010 MtrunA17_Chr4g0076731 47.458 177 76 4 16 192 56 215 2.47e-50 172
Msa0301010 MtrunA17_Chr4g0060931 49.412 170 70 4 14 176 17 177 4.07e-50 170
Msa0301010 MtrunA17_Chr3g0091921 49.697 165 79 3 9 173 11 171 1.47e-49 167
Msa0301010 MtrunA17_Chr5g0433781 52.795 161 62 4 13 168 5 156 1.63e-49 174
Msa0301010 MtrunA17_Chr2g0309331 44.503 191 94 4 13 200 9 190 9.82e-49 166
Msa0301010 MtrunA17_Chr7g0253011 49.390 164 79 3 7 168 10 171 1.27e-48 167
Msa0301010 MtrunA17_Chr1g0183741 44.318 176 90 2 13 188 9 176 1.58e-48 163
Msa0301010 MtrunA17_Chr5g0442771 47.458 177 87 3 16 186 20 196 1.68e-48 164
Msa0301010 MtrunA17_Chr4g0018391 50.943 159 63 4 15 168 8 156 3.93e-48 164
Msa0301010 MtrunA17_Chr4g0054791 45.810 179 88 4 13 187 5 178 5.40e-48 163
Msa0301010 MtrunA17_Chr3g0109821 51.266 158 70 4 13 168 5 157 1.05e-47 169
Msa0301010 MtrunA17_Chr8g0385991 51.299 154 70 3 14 165 14 164 1.69e-47 159
Msa0301010 MtrunA17_Chr4g0017921 49.390 164 71 3 8 168 2 156 6.52e-47 161
Msa0301010 MtrunA17_Chr8g0346001 41.791 201 94 4 15 194 16 214 8.12e-47 163
Msa0301010 MtrunA17_Chr6g0461661 46.746 169 84 3 1 165 1 167 1.52e-46 161
Msa0301010 MtrunA17_Chr7g0261411 48.366 153 71 2 13 165 9 153 1.99e-46 158
Msa0301010 MtrunA17_Chr8g0372121 44.767 172 84 3 15 183 7 170 3.18e-46 158
Msa0301010 MtrunA17_Chr4g0038751 38.627 233 121 4 16 239 17 236 5.00e-46 157
Msa0301010 MtrunA17_Chr5g0405211 48.408 157 70 3 15 168 9 157 5.68e-46 159
Msa0301010 MtrunA17_Chr2g0311661 45.238 168 82 4 16 173 23 190 8.84e-46 157
Msa0301010 MtrunA17_Chr2g0311651 45.665 173 83 5 16 177 24 196 9.45e-46 157
Msa0301010 MtrunA17_Chr1g0200561 47.771 157 71 3 15 168 20 168 3.01e-45 157
Msa0301010 MtrunA17_Chr5g0398971 47.799 159 70 4 15 168 8 158 3.20e-45 157
Msa0301010 MtrunA17_Chr4g0056541 47.134 157 72 3 15 168 8 156 4.22e-45 157
Msa0301010 MtrunA17_Chr3g0144271 53.731 134 61 1 9 141 18 151 1.26e-44 157
Msa0301010 MtrunA17_Chr5g0400461 45.399 163 75 3 13 168 5 160 1.58e-44 155
Msa0301010 MtrunA17_Chr2g0312321 46.711 152 74 3 14 165 11 155 4.18e-44 153
Msa0301010 MtrunA17_Chr3g0131911 49.686 159 74 4 14 168 14 170 9.59e-43 147
Msa0301010 MtrunA17_Chr1g0201021 51.562 128 58 2 16 141 21 146 2.85e-41 150
Msa0301010 MtrunA17_Chr7g0217711 51.562 128 60 1 14 141 19 144 4.16e-41 141
Msa0301010 MtrunA17_Chr7g0217721 42.197 173 87 2 14 175 19 189 5.10e-41 146
Msa0301010 MtrunA17_Chr3g0130101 45.161 155 77 4 16 168 9 157 7.77e-41 145
Msa0301010 MtrunA17_Chr1g0197351 46.250 160 80 3 13 168 41 198 1.68e-40 147
Msa0301010 MtrunA17_Chr5g0428991 44.693 179 86 6 14 186 25 196 1.30e-39 147
Msa0301010 MtrunA17_Chr3g0128151 45.556 180 88 5 13 189 21 193 3.56e-39 145
Msa0301010 MtrunA17_Chr1g0197361 40.107 187 91 6 16 189 10 188 5.55e-39 145
Msa0301010 MtrunA17_Chr8g0364791 43.226 155 80 4 16 168 8 156 9.00e-38 139
Msa0301010 MtrunA17_Chr3g0092671 38.710 186 95 5 16 189 7 185 6.16e-37 138
Msa0301010 MtrunA17_Chr3g0128111 41.436 181 90 4 17 191 45 215 7.62e-37 132
Msa0301010 MtrunA17_Chr8g0345671 40.761 184 92 6 11 181 8 187 1.21e-36 135
Msa0301010 MtrunA17_Chr8g0384201 35.023 217 125 5 16 222 8 218 1.63e-36 137
Msa0301010 MtrunA17_Chr4g0026141 44.654 159 77 5 14 165 5 159 2.65e-35 129
Msa0301010 MtrunA17_Chr4g0050701 37.580 157 88 2 14 168 11 159 1.21e-33 122
Msa0301010 MtrunA17_Chr7g0266701 35.821 201 118 5 14 207 4 200 1.83e-33 124
Msa0301010 MtrunA17_Chr8g0345691 37.634 186 87 6 15 181 13 188 3.57e-32 124
Msa0301010 MtrunA17_Chr2g0321631 41.509 159 81 5 15 165 5 159 2.88e-31 117
Msa0301010 MtrunA17_Chr2g0321741 40.909 154 72 5 35 182 13 153 4.56e-30 117
Msa0301010 MtrunA17_Chr8g0345711 37.888 161 89 5 13 163 11 170 6.73e-30 112
Msa0301010 MtrunA17_Chr8g0384351 37.654 162 75 5 7 168 3 138 2.25e-27 105
Msa0301010 MtrunA17_Chr8g0345731 39.394 132 75 3 14 140 24 155 1.29e-26 103
Msa0301010 MtrunA17_Chr3g0113001 50.495 101 47 2 65 165 16 113 5.10e-26 105
Msa0301010 MtrunA17_Chr8g0345721 35.329 167 70 4 13 142 29 194 1.66e-25 101
Msa0301010 MtrunA17_Chr8g0345741 41.176 119 66 3 25 140 2 119 4.01e-24 96.3
Msa0301010 MtrunA17_Chr7g0243371 54.667 75 34 0 67 141 17 91 3.64e-23 92.4
Msa0301010 MtrunA17_Chr3g0113031 50.562 89 42 1 77 165 3 89 8.83e-22 92.8
Msa0301010 MtrunA17_Chr3g0130321 35.976 164 81 8 14 165 7 158 1.16e-21 90.9
Msa0301010 MtrunA17_Chr8g0345701 33.557 149 79 5 9 140 2 147 1.62e-20 87.0
Msa0301010 MtrunA17_Chr7g0251651 27.711 166 112 5 8 169 12 173 1.29e-15 73.9
Msa0301010 MtrunA17_Chr7g0274971 32.544 169 92 7 20 175 11 170 3.78e-15 73.2
Msa0301010 MtrunA17_Chr1g0168571 31.111 180 99 9 22 188 13 180 1.11e-11 64.7
Msa0301010 MtrunA17_Chr3g0113011 55.319 47 21 0 14 60 19 65 1.35e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0301010 AT1G69490.1 66.471 170 55 1 10 179 5 172 1.95e-81 248
Msa0301010 AT1G61110.1 66.860 172 40 3 14 173 16 182 1.58e-79 245
Msa0301010 AT3G15510.1 61.988 171 58 1 18 181 21 191 2.44e-77 241
Msa0301010 AT1G77450.1 63.975 161 54 2 8 168 4 160 1.79e-73 227
Msa0301010 AT3G04070.2 56.842 190 67 3 13 187 9 198 1.83e-72 228
Msa0301010 AT1G01720.1 66.452 155 49 1 14 168 7 158 4.76e-72 224
Msa0301010 AT3G04070.1 54.369 206 63 4 13 187 9 214 6.66e-72 227
Msa0301010 AT5G08790.1 57.778 180 72 2 9 187 2 178 1.66e-69 218
Msa0301010 AT1G52880.1 67.702 161 46 3 18 172 21 181 4.57e-69 218
Msa0301010 AT5G63790.1 57.865 178 70 3 9 184 45 219 5.27e-69 218
Msa0301010 AT5G63790.2 57.865 178 70 3 9 184 55 229 6.92e-69 218
Msa0301010 AT3G15500.1 57.988 169 65 2 10 178 10 172 5.68e-67 213
Msa0301010 AT4G27410.2 57.317 164 64 2 10 173 10 167 1.10e-66 211
Msa0301010 AT1G52890.1 57.225 173 68 2 1 173 1 167 1.71e-66 211
Msa0301010 AT4G27410.3 51.934 181 64 3 10 173 10 184 2.50e-62 201
Msa0301010 AT2G24430.2 50.588 170 79 2 4 173 6 170 2.62e-55 182
Msa0301010 AT2G24430.1 50.588 170 79 2 4 173 6 170 2.62e-55 182
Msa0301010 AT1G26870.1 52.532 158 70 1 16 168 18 175 1.79e-54 183
Msa0301010 AT5G39820.1 42.654 211 104 3 16 209 22 232 4.15e-54 180
Msa0301010 AT1G76420.1 51.613 155 70 1 14 168 22 171 2.29e-53 178
Msa0301010 AT5G53950.1 52.147 163 75 2 6 168 10 169 4.18e-53 179
Msa0301010 AT5G07680.1 51.852 162 74 3 14 175 17 174 1.02e-52 176
Msa0301010 AT5G07680.2 51.852 162 74 3 14 175 3 160 1.08e-52 176
Msa0301010 AT3G15170.1 52.980 151 69 1 15 165 21 169 1.77e-51 172
Msa0301010 AT5G13180.1 53.947 152 62 3 14 165 14 157 1.87e-51 171
Msa0301010 AT3G04060.1 48.295 176 88 3 5 180 11 183 1.89e-51 173
Msa0301010 AT5G39610.1 51.250 160 64 3 14 168 20 170 2.49e-51 171
Msa0301010 AT5G61430.1 50.617 162 76 3 14 175 16 173 3.26e-51 172
Msa0301010 AT3G17730.1 50.888 169 74 5 14 179 6 168 3.34e-51 170
Msa0301010 AT2G02450.1 54.000 150 62 3 16 165 53 195 8.13e-51 172
Msa0301010 AT2G02450.2 54.000 150 62 3 16 165 53 195 8.67e-51 174
Msa0301010 AT1G65910.1 50.000 170 77 4 13 180 5 168 1.12e-50 177
Msa0301010 AT3G03200.1 51.250 160 67 4 13 168 5 157 2.25e-50 174
Msa0301010 AT3G18400.1 49.375 160 74 2 14 173 5 157 3.91e-50 169
Msa0301010 AT5G18270.1 47.283 184 83 4 6 189 13 182 5.58e-50 169
Msa0301010 AT5G18270.2 47.283 184 83 4 6 189 13 182 1.44e-49 168
Msa0301010 AT3G29035.1 58.594 128 51 1 14 141 24 149 1.59e-49 167
Msa0301010 AT2G33480.1 52.632 152 63 3 14 165 15 157 1.97e-49 166
Msa0301010 AT5G17260.1 50.625 160 68 4 13 168 5 157 2.34e-49 171
Msa0301010 AT2G33480.2 52.632 152 61 3 14 165 15 155 3.25e-49 165
Msa0301010 AT5G46590.1 50.000 178 78 5 14 187 6 176 3.78e-49 166
Msa0301010 AT2G43000.1 49.333 150 71 2 16 165 20 164 4.35e-49 165
Msa0301010 AT1G79580.3 49.686 159 69 3 13 168 16 166 4.76e-48 165
Msa0301010 AT1G79580.5 49.686 159 69 3 13 168 16 166 4.76e-48 165
Msa0301010 AT1G79580.4 49.686 159 69 3 13 168 16 166 4.76e-48 165
Msa0301010 AT1G79580.2 49.686 159 69 3 13 168 16 166 4.76e-48 165
Msa0301010 AT1G79580.1 49.686 159 69 3 13 168 16 166 4.76e-48 165
Msa0301010 AT4G10350.1 50.617 162 71 3 7 165 2 157 5.69e-48 164
Msa0301010 AT2G17040.1 42.180 211 102 5 16 220 8 204 7.43e-48 162
Msa0301010 AT4G17980.1 50.307 163 67 5 13 168 5 160 2.36e-47 160
Msa0301010 AT4G17980.2 50.307 163 67 5 13 168 5 160 2.94e-47 161
Msa0301010 AT1G33280.1 50.610 164 69 3 8 168 2 156 3.06e-47 161
Msa0301010 AT1G71930.2 47.799 159 72 3 13 168 8 158 4.31e-47 161
Msa0301010 AT1G71930.1 47.799 159 72 3 13 168 8 158 4.31e-47 161
Msa0301010 AT1G56010.2 42.222 180 100 3 14 192 19 195 4.10e-46 159
Msa0301010 AT4G28530.1 46.286 175 70 3 14 172 10 176 5.41e-46 159
Msa0301010 AT4G36160.1 47.799 159 72 3 13 168 9 159 7.33e-46 160
Msa0301010 AT4G36160.3 47.799 159 72 3 13 168 9 159 7.33e-46 160
Msa0301010 AT4G36160.2 47.799 159 72 3 13 168 13 163 7.75e-46 160
Msa0301010 AT5G46590.2 54.074 135 59 2 14 146 6 139 1.01e-45 157
Msa0301010 AT3G10480.1 47.205 161 78 3 10 168 23 178 1.38e-45 160
Msa0301010 AT1G12260.2 48.408 157 70 3 15 168 8 156 1.48e-45 158
Msa0301010 AT2G18060.3 47.170 159 73 3 13 168 8 158 1.48e-45 159
Msa0301010 AT2G18060.1 47.170 159 73 3 13 168 8 158 1.48e-45 159
Msa0301010 AT1G12260.1 48.701 154 68 3 15 165 8 153 2.97e-45 159
Msa0301010 AT3G10480.2 47.826 161 76 4 10 168 23 177 3.84e-45 159
Msa0301010 AT5G66300.1 47.799 159 73 3 13 168 11 162 5.05e-45 155
Msa0301010 AT1G54330.1 47.468 158 72 3 13 168 5 153 7.61e-45 155
Msa0301010 AT1G32770.1 46.988 166 76 5 15 170 17 180 8.63e-45 156
Msa0301010 AT3G10490.1 46.203 158 78 3 13 168 26 178 1.39e-44 152
Msa0301010 AT1G62700.1 46.584 161 75 3 15 172 8 160 2.78e-44 156
Msa0301010 AT1G62700.2 46.584 161 75 3 15 172 8 160 2.78e-44 156
Msa0301010 AT5G62380.2 46.835 158 73 3 14 168 7 156 4.05e-44 154
Msa0301010 AT5G62380.1 46.835 158 73 3 14 168 7 156 4.05e-44 154
Msa0301010 AT1G32510.1 47.826 161 70 4 14 165 6 161 5.72e-44 152
Msa0301010 AT3G12977.1 41.040 173 97 2 14 186 18 185 1.49e-43 151
Msa0301010 AT2G46770.1 44.578 166 78 4 15 168 17 180 2.59e-43 152
Msa0301010 AT3G10490.2 46.203 158 78 3 13 168 26 178 6.15e-43 154
Msa0301010 AT3G10500.1 45.732 164 81 3 7 168 2 159 1.49e-42 154
Msa0301010 AT1G33060.2 50.000 158 71 4 13 168 23 174 2.29e-42 155
Msa0301010 AT1G33060.1 50.000 158 71 4 13 168 23 174 2.65e-42 155
Msa0301010 AT3G10480.3 40.206 194 76 4 10 168 23 211 4.63e-42 152
Msa0301010 AT4G35580.3 53.676 136 59 2 7 140 2 135 1.11e-41 152
Msa0301010 AT4G35580.2 53.676 136 59 2 7 140 2 135 1.21e-41 152
Msa0301010 AT4G35580.1 53.676 136 59 2 7 140 2 135 1.67e-41 151
Msa0301010 AT1G34180.3 51.562 128 58 2 16 141 18 143 2.45e-41 149
Msa0301010 AT1G34180.1 51.562 128 58 2 16 141 18 143 1.11e-40 149
Msa0301010 AT3G12910.1 44.767 172 77 5 16 173 23 190 1.60e-40 144
Msa0301010 AT3G61910.1 41.477 176 85 4 14 175 11 182 1.84e-40 144
Msa0301010 AT5G04410.1 39.896 193 99 4 7 188 2 188 2.47e-40 149
Msa0301010 AT1G34190.1 50.000 128 60 2 16 141 18 143 2.79e-40 148
Msa0301010 AT5G24590.2 51.128 133 62 2 13 143 12 143 1.88e-39 144
Msa0301010 AT3G44290.2 35.714 196 101 5 16 210 16 187 2.28e-38 136
Msa0301010 AT5G09330.5 41.935 155 82 3 16 168 8 156 2.64e-38 142
Msa0301010 AT5G09330.2 41.935 155 82 3 16 168 8 156 2.64e-38 142
Msa0301010 AT5G09330.4 41.935 155 82 3 16 168 8 156 2.64e-38 142
Msa0301010 AT5G09330.3 41.935 155 82 3 16 168 8 156 2.64e-38 142
Msa0301010 AT5G09330.1 41.935 155 82 3 16 168 8 156 2.64e-38 142
Msa0301010 AT1G34180.4 47.143 140 58 3 16 141 18 155 3.18e-38 141
Msa0301010 AT1G34180.2 47.143 140 58 3 16 141 18 155 1.24e-37 141
Msa0301010 AT3G44290.1 35.714 196 101 5 16 210 16 187 2.48e-37 136
Msa0301010 AT2G27300.1 33.333 234 134 6 16 237 16 239 2.96e-37 136
Msa0301010 AT3G49530.2 47.368 133 67 2 13 143 12 143 6.92e-37 137
Msa0301010 AT3G49530.1 48.462 130 64 2 13 140 12 140 8.84e-37 137
Msa0301010 AT5G22290.1 42.593 162 79 4 13 172 20 169 1.28e-36 134
Msa0301010 AT5G64060.1 38.922 167 93 4 14 177 6 166 7.56e-36 132
Msa0301010 AT5G04395.1 40.940 149 74 2 8 142 22 170 2.80e-34 124
Msa0301010 AT1G32870.2 44.578 166 84 4 8 171 4 163 3.21e-34 131
Msa0301010 AT1G32870.1 44.311 167 85 4 8 172 4 164 3.47e-34 131
Msa0301010 AT1G32870.3 44.311 167 85 4 8 172 40 200 4.02e-34 131
Msa0301010 AT5G64530.1 36.158 177 91 3 14 180 3 167 2.23e-32 119
Msa0301010 AT5G64530.2 43.077 130 62 2 14 143 3 120 5.19e-32 117
Msa0301010 AT5G22380.1 38.596 171 96 4 17 181 8 175 5.90e-32 119
Msa0301010 AT4G28530.2 38.286 175 47 4 14 172 10 139 1.02e-29 115
Msa0301010 AT3G44350.2 38.710 186 93 8 17 192 8 182 1.04e-29 114
Msa0301010 AT3G44350.1 42.446 139 70 4 17 148 8 143 3.36e-29 110
Msa0301010 AT5G61430.2 48.649 111 53 3 65 175 4 110 7.50e-29 112
Msa0301010 AT1G56010.1 42.308 130 72 2 63 192 2 128 1.02e-28 111
Msa0301010 AT4G01520.1 39.634 164 85 6 15 173 5 159 6.15e-28 110
Msa0301010 AT4G01550.1 38.983 177 94 6 17 189 7 173 9.06e-28 112
Msa0301010 AT4G10350.2 53.535 99 40 2 67 165 18 110 2.74e-27 108
Msa0301010 AT2G33480.3 51.515 99 42 2 67 165 8 100 6.39e-27 105
Msa0301010 AT3G12977.2 42.975 121 64 2 66 186 17 132 7.88e-27 105
Msa0301010 AT4G01540.3 38.272 162 86 6 17 173 7 159 6.77e-26 107
Msa0301010 AT4G01540.4 38.272 162 86 6 17 173 7 159 8.07e-26 106
Msa0301010 AT4G01540.2 38.272 162 86 6 17 173 7 159 8.42e-26 106
Msa0301010 AT4G01540.1 38.272 162 86 6 17 173 7 159 8.54e-26 107
Msa0301010 AT3G04420.2 35.849 159 87 4 15 169 4 151 1.41e-25 103
Msa0301010 AT3G04420.1 35.849 159 87 4 15 169 4 151 3.02e-25 103
Msa0301010 AT1G02230.1 37.692 130 73 4 15 139 4 130 2.04e-22 96.7
Msa0301010 AT1G01010.1 34.054 185 95 7 17 188 6 176 2.16e-21 94.4
Msa0301010 AT2G43000.2 46.667 90 43 2 76 165 2 86 2.14e-20 87.8
Msa0301010 AT5G14000.2 37.405 131 76 3 14 142 15 141 2.94e-20 86.3
Msa0301010 AT5G14000.1 37.405 131 76 3 14 142 15 141 1.06e-19 85.9
Msa0301010 AT1G02250.1 31.875 160 93 5 15 169 4 152 1.71e-19 88.2
Msa0301010 AT1G02220.1 37.209 129 72 4 15 139 4 127 2.27e-19 88.2
Msa0301010 AT3G56530.1 34.058 138 80 4 8 139 46 178 1.75e-16 79.3
Msa0301010 AT3G10490.4 46.341 82 39 2 87 168 2 78 2.04e-16 79.3
Msa0301010 AT3G10490.3 46.341 82 39 2 87 168 2 78 2.04e-16 79.3
Msa0301010 AT5G50820.1 33.333 141 68 7 14 144 17 141 2.62e-14 70.9
Msa0301010 AT3G55210.1 28.994 169 94 6 12 165 9 166 7.74e-14 70.9
Msa0301010 AT2G18060.2 44.156 77 35 2 92 168 2 70 4.62e-13 68.9
Msa0301010 AT5G22290.2 46.914 81 30 3 93 172 2 70 1.08e-12 67.0
Msa0301010 AT1G28470.1 32.877 146 77 8 13 141 76 217 2.74e-11 63.9
Msa0301010 AT3G04430.1 37.500 104 61 4 20 121 6 107 9.76e-11 60.8

Find 65 sgRNAs with CRISPR-Local

Find 148 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCACATGAAGAAATTAT+TGG 0.175721 2_3:+56693363 None:intergenic
TCACCCCTTGGTAGGTTTAA+TGG 0.204888 2_3:+56693006 None:intergenic
ATGTCGAGTTTGAGCGTTAA+TGG 0.222020 2_3:-56692865 Msa0301010:CDS
TCAAACTGTAATCCCTTCTT+TGG 0.246326 2_3:-56692785 Msa0301010:CDS
TGGAAAAGTGTAATTTGATT+TGG 0.281222 2_3:+56693744 None:intergenic
CCCGAAGCTGCTGTTCTATT+TGG 0.284131 2_3:+56693414 None:intergenic
GAACAGCAGCTTCGGGATAC+TGG 0.314644 2_3:-56693407 Msa0301010:CDS
GATCGAAAGTTCACGTTTGT+AGG 0.317656 2_3:+56692976 None:intergenic
ACCAAATAGAACAGCAGCTT+CGG 0.326451 2_3:-56693415 Msa0301010:CDS
TTATGTCGGGTTCGAAATAA+AGG 0.361202 2_3:-56693084 Msa0301010:CDS
TTATTCCATTCGGATACTTT+CGG 0.364663 2_3:+56693439 None:intergenic
CCTTGGTAGGTTTAATGGTA+TGG 0.374086 2_3:+56693011 None:intergenic
TAGATGGAGGGACAACAAAA+TGG 0.376134 2_3:-56693769 Msa0301010:CDS
CTAACTTCAGTTTATGAAGA+AGG 0.386642 2_3:-56692826 Msa0301010:CDS
CTTTGTTTGGTGAGGAAGAA+TGG 0.399941 2_3:-56693482 Msa0301010:CDS
TCGGGATACTGGAAGGCATC+TGG 0.402275 2_3:-56693396 Msa0301010:CDS
CTATTTGGTCTTATTCCATT+CGG 0.402956 2_3:+56693429 None:intergenic
TTCGGATACTTTCGGTCTCT+CGG 0.404947 2_3:+56693447 None:intergenic
AGATTTGTCTAATTTGTTCT+CGG 0.421589 2_3:+56692675 None:intergenic
GCTATAATCGACGCTGGAAG+TGG 0.423391 2_3:+56693649 None:intergenic
TTATGAAGAAGGTTTCAATA+AGG 0.425370 2_3:-56692815 Msa0301010:CDS
CCAAATAGAACAGCAGCTTC+GGG 0.428897 2_3:-56693414 Msa0301010:CDS
TTATTCAGGTAGACCTCCTA+AGG 0.433041 2_3:-56693307 Msa0301010:CDS
GGTAGGTTTAATGGTATGGT+TGG 0.465528 2_3:+56693015 None:intergenic
ATCATAGCCTCTATTCTAGT+TGG 0.470052 2_3:-56692916 Msa0301010:CDS
AATGGTATGGTTGGTTCACT+AGG 0.470257 2_3:+56693024 None:intergenic
CAATCTGTCTTAACTCCCTT+AGG 0.472334 2_3:+56693291 None:intergenic
TTGAAGTAACATTCCAAAGA+AGG 0.474571 2_3:+56692772 None:intergenic
CTAAGGGAGTTAAGACAGAT+TGG 0.476497 2_3:-56693290 Msa0301010:CDS
GGATGACTGGGTATTATGTC+GGG 0.477294 2_3:-56693097 Msa0301010:CDS
TTTGAGTTTGAATGATTTCG+TGG 0.477326 2_3:+56693236 None:intergenic
TTGCTGATATCTTTATGTAA+AGG 0.481819 2_3:+56692618 None:intergenic
TCATGTGCATCAAAGCATAT+AGG 0.483990 2_3:-56693351 Msa0301010:CDS
CTCGACATGTTCTCAGTTGG+AGG 0.484459 2_3:+56692880 None:intergenic
TGTGCAGAGAAGTCTTTGTT+TGG 0.486062 2_3:-56693495 Msa0301010:intron
TGGATGACTGGGTATTATGT+CGG 0.492959 2_3:-56693098 Msa0301010:CDS
GATCATGAATGAGTATAGAT+TGG 0.501119 2_3:-56693268 Msa0301010:CDS
ATAGCCTCTATTCTAGTTGG+TGG 0.501858 2_3:-56692913 Msa0301010:CDS
GTAGGACGTTCTTCACCCCT+TGG 0.504800 2_3:+56692994 None:intergenic
ATCTCTATAAGTATAATCCA+TGG 0.526250 2_3:-56693618 Msa0301010:CDS
AAACTCGACATGTTCTCAGT+TGG 0.532407 2_3:+56692877 None:intergenic
AACTCCACCAACTAGAATAG+AGG 0.537358 2_3:+56692909 None:intergenic
TGAAGTAACATTCCAAAGAA+GGG 0.552108 2_3:+56692773 None:intergenic
TGAGTTCTTCATCAGAAGGA+TGG 0.561435 2_3:+56693707 None:intergenic
TACTTGAAAACTTACCCGCA+TGG 0.566843 2_3:+56693209 None:intergenic
ACGAAATCATTCAAACTCAA+AGG 0.572394 2_3:-56693234 Msa0301010:CDS
GCATAAAATTCTTAGATGGA+GGG 0.583191 2_3:-56693781 None:intergenic
GACGTTCTTCACCCCTTGGT+AGG 0.587479 2_3:+56692998 None:intergenic
AGAGAAGTCTTTGTTTGGTG+AGG 0.597719 2_3:-56693490 Msa0301010:CDS
ATTTCAGCTATAATCGACGC+TGG 0.604840 2_3:+56693643 None:intergenic
AGCAGCTTCGGGATACTGGA+AGG 0.607218 2_3:-56693403 Msa0301010:CDS
TCTGTCTTAACTCCCTTAGG+AGG 0.608939 2_3:+56693294 None:intergenic
ACTATGAGTTCTTCATCAGA+AGG 0.609045 2_3:+56693703 None:intergenic
TCTCTATAAGTATAATCCAT+GGG 0.620806 2_3:-56693617 Msa0301010:CDS
CCATACCATTAAACCTACCA+AGG 0.620878 2_3:-56693011 Msa0301010:CDS
AGAGACCGAAAGTATCCGAA+TGG 0.624198 2_3:-56693444 Msa0301010:CDS
CAAACTCAAAGGTTCCATGC+GGG 0.628355 2_3:-56693223 Msa0301010:intron
TATTCAGGTAGACCTCCTAA+GGG 0.630503 2_3:-56693306 Msa0301010:CDS
GACATGTTCTCAGTTGGAGG+AGG 0.631484 2_3:+56692883 None:intergenic
AACATACTAGGTAACTCCCA+TGG 0.643583 2_3:+56693601 None:intergenic
CATACCATTAAACCTACCAA+GGG 0.657723 2_3:-56693010 Msa0301010:CDS
GAAGGATGGAATCTGAAACC+AGG 0.664271 2_3:+56693721 None:intergenic
GGATGGAATCTGAAACCAGG+TGG 0.688994 2_3:+56693724 None:intergenic
TCAAACTCAAAGGTTCCATG+CGG 0.709010 2_3:-56693224 Msa0301010:CDS
ATACCATTAAACCTACCAAG+GGG 0.762811 2_3:-56693009 Msa0301010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTATGATAAACAAGATT+TGG + chr2_3:56692857-56692876 None:intergenic 20.0%
!!! TCATTAGATTTTCTTTTTAG+TGG + chr2_3:56693651-56693670 None:intergenic 20.0%
!! ACTAAAAAGAAAATCTAATG+AGG - chr2_3:56693650-56693669 Msa0301010:CDS 20.0%
!! TCATTATGATAAACAAGATT+TGG + chr2_3:56692857-56692876 None:intergenic 20.0%
!!! TCATTAGATTTTCTTTTTAG+TGG + chr2_3:56693651-56693670 None:intergenic 20.0%
!! ACTAAAAAGAAAATCTAATG+AGG - chr2_3:56693650-56693669 Msa0301010:CDS 20.0%
!! TGGAAAAGTGTAATTTGATT+TGG + chr2_3:56692655-56692674 None:intergenic 25.0%
! ATCTCTATAAGTATAATCCA+TGG - chr2_3:56692778-56692797 Msa0301010:CDS 25.0%
! TCTCTATAAGTATAATCCAT+GGG - chr2_3:56692779-56692798 Msa0301010:CDS 25.0%
! TTATGAAGAAGGTTTCAATA+AGG - chr2_3:56693581-56693600 Msa0301010:intron 25.0%
!!! AGATTTGTCTAATTTGTTCT+CGG + chr2_3:56693724-56693743 None:intergenic 25.0%
!! TGGAAAAGTGTAATTTGATT+TGG + chr2_3:56692655-56692674 None:intergenic 25.0%
! ATCTCTATAAGTATAATCCA+TGG - chr2_3:56692778-56692797 Msa0301010:CDS 25.0%
! TCTCTATAAGTATAATCCAT+GGG - chr2_3:56692779-56692798 Msa0301010:CDS 25.0%
! TTATGAAGAAGGTTTCAATA+AGG - chr2_3:56693581-56693600 Msa0301010:intron 25.0%
!!! AGATTTGTCTAATTTGTTCT+CGG + chr2_3:56693724-56693743 None:intergenic 25.0%
TAAGAAGTCAAGAACATACT+AGG + chr2_3:56692810-56692829 None:intergenic 30.0%
TTATTCCATTCGGATACTTT+CGG + chr2_3:56692960-56692979 None:intergenic 30.0%
!! CTATTTGGTCTTATTCCATT+CGG + chr2_3:56692970-56692989 None:intergenic 30.0%
GATGCACATGAAGAAATTAT+TGG + chr2_3:56693036-56693055 None:intergenic 30.0%
!! AAAGCTCTTGTGTTTTATTC+AGG - chr2_3:56693075-56693094 Msa0301010:CDS 30.0%
GATCATGAATGAGTATAGAT+TGG - chr2_3:56693128-56693147 Msa0301010:intron 30.0%
! TTTGAGTTTGAATGATTTCG+TGG + chr2_3:56693163-56693182 None:intergenic 30.0%
ACGAAATCATTCAAACTCAA+AGG - chr2_3:56693162-56693181 Msa0301010:intron 30.0%
GTTCAAGCACTATGAATAAA+GGG + chr2_3:56693242-56693261 None:intergenic 30.0%
AGTTCAAGCACTATGAATAA+AGG + chr2_3:56693243-56693262 None:intergenic 30.0%
CTAACTTCAGTTTATGAAGA+AGG - chr2_3:56693570-56693589 Msa0301010:intron 30.0%
TGAAGTAACATTCCAAAGAA+GGG + chr2_3:56693626-56693645 None:intergenic 30.0%
TTGAAGTAACATTCCAAAGA+AGG + chr2_3:56693627-56693646 None:intergenic 30.0%
TAAGAAGTCAAGAACATACT+AGG + chr2_3:56692810-56692829 None:intergenic 30.0%
TTATTCCATTCGGATACTTT+CGG + chr2_3:56692960-56692979 None:intergenic 30.0%
!! CTATTTGGTCTTATTCCATT+CGG + chr2_3:56692970-56692989 None:intergenic 30.0%
GATGCACATGAAGAAATTAT+TGG + chr2_3:56693036-56693055 None:intergenic 30.0%
!! AAAGCTCTTGTGTTTTATTC+AGG - chr2_3:56693075-56693094 Msa0301010:CDS 30.0%
GATCATGAATGAGTATAGAT+TGG - chr2_3:56693128-56693147 Msa0301010:intron 30.0%
! TTTGAGTTTGAATGATTTCG+TGG + chr2_3:56693163-56693182 None:intergenic 30.0%
ACGAAATCATTCAAACTCAA+AGG - chr2_3:56693162-56693181 Msa0301010:intron 30.0%
GTTCAAGCACTATGAATAAA+GGG + chr2_3:56693242-56693261 None:intergenic 30.0%
AGTTCAAGCACTATGAATAA+AGG + chr2_3:56693243-56693262 None:intergenic 30.0%
CTAACTTCAGTTTATGAAGA+AGG - chr2_3:56693570-56693589 Msa0301010:intron 30.0%
TGAAGTAACATTCCAAAGAA+GGG + chr2_3:56693626-56693645 None:intergenic 30.0%
TTGAAGTAACATTCCAAAGA+AGG + chr2_3:56693627-56693646 None:intergenic 30.0%
! TCAAATTACACTTTTCCACC+TGG - chr2_3:56692657-56692676 Msa0301010:CDS 35.0%
ACTATGAGTTCTTCATCAGA+AGG + chr2_3:56692696-56692715 None:intergenic 35.0%
TCATGTGCATCAAAGCATAT+AGG - chr2_3:56693045-56693064 Msa0301010:CDS 35.0%
!! CATTTCTCTGCTTTTACAGT+TGG - chr2_3:56693278-56693297 Msa0301010:CDS 35.0%
TTATGTCGGGTTCGAAATAA+AGG - chr2_3:56693312-56693331 Msa0301010:CDS 35.0%
CATACCATTAAACCTACCAA+GGG - chr2_3:56693386-56693405 Msa0301010:CDS 35.0%
ATACCATTAAACCTACCAAG+GGG - chr2_3:56693387-56693406 Msa0301010:CDS 35.0%
ATCATAGCCTCTATTCTAGT+TGG - chr2_3:56693480-56693499 Msa0301010:CDS 35.0%
TCAAACTGTAATCCCTTCTT+TGG - chr2_3:56693611-56693630 Msa0301010:CDS 35.0%
!! AGCTTTTGAAAATCGATGCT+AGG + chr2_3:56693747-56693766 None:intergenic 35.0%
! TCAAATTACACTTTTCCACC+TGG - chr2_3:56692657-56692676 Msa0301010:CDS 35.0%
ACTATGAGTTCTTCATCAGA+AGG + chr2_3:56692696-56692715 None:intergenic 35.0%
TCATGTGCATCAAAGCATAT+AGG - chr2_3:56693045-56693064 Msa0301010:CDS 35.0%
!! CATTTCTCTGCTTTTACAGT+TGG - chr2_3:56693278-56693297 Msa0301010:CDS 35.0%
TTATGTCGGGTTCGAAATAA+AGG - chr2_3:56693312-56693331 Msa0301010:CDS 35.0%
CATACCATTAAACCTACCAA+GGG - chr2_3:56693386-56693405 Msa0301010:CDS 35.0%
ATACCATTAAACCTACCAAG+GGG - chr2_3:56693387-56693406 Msa0301010:CDS 35.0%
ATCATAGCCTCTATTCTAGT+TGG - chr2_3:56693480-56693499 Msa0301010:CDS 35.0%
TCAAACTGTAATCCCTTCTT+TGG - chr2_3:56693611-56693630 Msa0301010:CDS 35.0%
!! AGCTTTTGAAAATCGATGCT+AGG + chr2_3:56693747-56693766 None:intergenic 35.0%
TGAGTTCTTCATCAGAAGGA+TGG + chr2_3:56692692-56692711 None:intergenic 40.0%
ATTTCAGCTATAATCGACGC+TGG + chr2_3:56692756-56692775 None:intergenic 40.0%
AACATACTAGGTAACTCCCA+TGG + chr2_3:56692798-56692817 None:intergenic 40.0%
TGTGCAGAGAAGTCTTTGTT+TGG - chr2_3:56692901-56692920 Msa0301010:CDS 40.0%
! AGAGAAGTCTTTGTTTGGTG+AGG - chr2_3:56692906-56692925 Msa0301010:CDS 40.0%
! CTTTGTTTGGTGAGGAAGAA+TGG - chr2_3:56692914-56692933 Msa0301010:CDS 40.0%
ACCAAATAGAACAGCAGCTT+CGG - chr2_3:56692981-56693000 Msa0301010:CDS 40.0%
TTATTCAGGTAGACCTCCTA+AGG - chr2_3:56693089-56693108 Msa0301010:CDS 40.0%
TATTCAGGTAGACCTCCTAA+GGG - chr2_3:56693090-56693109 Msa0301010:CDS 40.0%
CAATCTGTCTTAACTCCCTT+AGG + chr2_3:56693108-56693127 None:intergenic 40.0%
CTAAGGGAGTTAAGACAGAT+TGG - chr2_3:56693106-56693125 Msa0301010:intron 40.0%
TCAAACTCAAAGGTTCCATG+CGG - chr2_3:56693172-56693191 Msa0301010:intron 40.0%
TACTTGAAAACTTACCCGCA+TGG + chr2_3:56693190-56693209 None:intergenic 40.0%
! TGCTTTTACAGTTGGATGAC+TGG - chr2_3:56693286-56693305 Msa0301010:CDS 40.0%
! GCTTTTACAGTTGGATGACT+GGG - chr2_3:56693287-56693306 Msa0301010:CDS 40.0%
TGGATGACTGGGTATTATGT+CGG - chr2_3:56693298-56693317 Msa0301010:CDS 40.0%
! AATGGTATGGTTGGTTCACT+AGG + chr2_3:56693375-56693394 None:intergenic 40.0%
GGTAGGTTTAATGGTATGGT+TGG + chr2_3:56693384-56693403 None:intergenic 40.0%
CCTTGGTAGGTTTAATGGTA+TGG + chr2_3:56693388-56693407 None:intergenic 40.0%
CCATACCATTAAACCTACCA+AGG - chr2_3:56693385-56693404 Msa0301010:CDS 40.0%
GATCGAAAGTTCACGTTTGT+AGG + chr2_3:56693423-56693442 None:intergenic 40.0%
! ATAGCCTCTATTCTAGTTGG+TGG - chr2_3:56693483-56693502 Msa0301010:CDS 40.0%
AACTCCACCAACTAGAATAG+AGG + chr2_3:56693490-56693509 None:intergenic 40.0%
AAACTCGACATGTTCTCAGT+TGG + chr2_3:56693522-56693541 None:intergenic 40.0%
ATGTCGAGTTTGAGCGTTAA+TGG - chr2_3:56693531-56693550 Msa0301010:intron 40.0%
TGAGTTCTTCATCAGAAGGA+TGG + chr2_3:56692692-56692711 None:intergenic 40.0%
ATTTCAGCTATAATCGACGC+TGG + chr2_3:56692756-56692775 None:intergenic 40.0%
AACATACTAGGTAACTCCCA+TGG + chr2_3:56692798-56692817 None:intergenic 40.0%
TGTGCAGAGAAGTCTTTGTT+TGG - chr2_3:56692901-56692920 Msa0301010:CDS 40.0%
! AGAGAAGTCTTTGTTTGGTG+AGG - chr2_3:56692906-56692925 Msa0301010:CDS 40.0%
! CTTTGTTTGGTGAGGAAGAA+TGG - chr2_3:56692914-56692933 Msa0301010:CDS 40.0%
ACCAAATAGAACAGCAGCTT+CGG - chr2_3:56692981-56693000 Msa0301010:CDS 40.0%
TTATTCAGGTAGACCTCCTA+AGG - chr2_3:56693089-56693108 Msa0301010:CDS 40.0%
TATTCAGGTAGACCTCCTAA+GGG - chr2_3:56693090-56693109 Msa0301010:CDS 40.0%
CAATCTGTCTTAACTCCCTT+AGG + chr2_3:56693108-56693127 None:intergenic 40.0%
CTAAGGGAGTTAAGACAGAT+TGG - chr2_3:56693106-56693125 Msa0301010:intron 40.0%
TCAAACTCAAAGGTTCCATG+CGG - chr2_3:56693172-56693191 Msa0301010:intron 40.0%
TACTTGAAAACTTACCCGCA+TGG + chr2_3:56693190-56693209 None:intergenic 40.0%
! TGCTTTTACAGTTGGATGAC+TGG - chr2_3:56693286-56693305 Msa0301010:CDS 40.0%
! GCTTTTACAGTTGGATGACT+GGG - chr2_3:56693287-56693306 Msa0301010:CDS 40.0%
TGGATGACTGGGTATTATGT+CGG - chr2_3:56693298-56693317 Msa0301010:CDS 40.0%
! AATGGTATGGTTGGTTCACT+AGG + chr2_3:56693375-56693394 None:intergenic 40.0%
GGTAGGTTTAATGGTATGGT+TGG + chr2_3:56693384-56693403 None:intergenic 40.0%
CCTTGGTAGGTTTAATGGTA+TGG + chr2_3:56693388-56693407 None:intergenic 40.0%
CCATACCATTAAACCTACCA+AGG - chr2_3:56693385-56693404 Msa0301010:CDS 40.0%
GATCGAAAGTTCACGTTTGT+AGG + chr2_3:56693423-56693442 None:intergenic 40.0%
! ATAGCCTCTATTCTAGTTGG+TGG - chr2_3:56693483-56693502 Msa0301010:CDS 40.0%
AACTCCACCAACTAGAATAG+AGG + chr2_3:56693490-56693509 None:intergenic 40.0%
AAACTCGACATGTTCTCAGT+TGG + chr2_3:56693522-56693541 None:intergenic 40.0%
ATGTCGAGTTTGAGCGTTAA+TGG - chr2_3:56693531-56693550 Msa0301010:intron 40.0%
! GAAGGATGGAATCTGAAACC+AGG + chr2_3:56692678-56692697 None:intergenic 45.0%
TTCGGATACTTTCGGTCTCT+CGG + chr2_3:56692952-56692971 None:intergenic 45.0%
!! AGAGACCGAAAGTATCCGAA+TGG - chr2_3:56692952-56692971 Msa0301010:CDS 45.0%
CCAAATAGAACAGCAGCTTC+GGG - chr2_3:56692982-56693001 Msa0301010:CDS 45.0%
TCTGTCTTAACTCCCTTAGG+AGG + chr2_3:56693105-56693124 None:intergenic 45.0%
CAAACTCAAAGGTTCCATGC+GGG - chr2_3:56693173-56693192 Msa0301010:intron 45.0%
GGATGACTGGGTATTATGTC+GGG - chr2_3:56693299-56693318 Msa0301010:CDS 45.0%
TCACCCCTTGGTAGGTTTAA+TGG + chr2_3:56693393-56693412 None:intergenic 45.0%
! GAAGGATGGAATCTGAAACC+AGG + chr2_3:56692678-56692697 None:intergenic 45.0%
TTCGGATACTTTCGGTCTCT+CGG + chr2_3:56692952-56692971 None:intergenic 45.0%
!! AGAGACCGAAAGTATCCGAA+TGG - chr2_3:56692952-56692971 Msa0301010:CDS 45.0%
CCAAATAGAACAGCAGCTTC+GGG - chr2_3:56692982-56693001 Msa0301010:CDS 45.0%
TCTGTCTTAACTCCCTTAGG+AGG + chr2_3:56693105-56693124 None:intergenic 45.0%
CAAACTCAAAGGTTCCATGC+GGG - chr2_3:56693173-56693192 Msa0301010:intron 45.0%
GGATGACTGGGTATTATGTC+GGG - chr2_3:56693299-56693318 Msa0301010:CDS 45.0%
TCACCCCTTGGTAGGTTTAA+TGG + chr2_3:56693393-56693412 None:intergenic 45.0%
! GGATGGAATCTGAAACCAGG+TGG + chr2_3:56692675-56692694 None:intergenic 50.0%
GCTATAATCGACGCTGGAAG+TGG + chr2_3:56692750-56692769 None:intergenic 50.0%
CCCGAAGCTGCTGTTCTATT+TGG + chr2_3:56692985-56693004 None:intergenic 50.0%
GACATGTTCTCAGTTGGAGG+AGG + chr2_3:56693516-56693535 None:intergenic 50.0%
CTCGACATGTTCTCAGTTGG+AGG + chr2_3:56693519-56693538 None:intergenic 50.0%
! GGATGGAATCTGAAACCAGG+TGG + chr2_3:56692675-56692694 None:intergenic 50.0%
GCTATAATCGACGCTGGAAG+TGG + chr2_3:56692750-56692769 None:intergenic 50.0%
CCCGAAGCTGCTGTTCTATT+TGG + chr2_3:56692985-56693004 None:intergenic 50.0%
GACATGTTCTCAGTTGGAGG+AGG + chr2_3:56693516-56693535 None:intergenic 50.0%
CTCGACATGTTCTCAGTTGG+AGG + chr2_3:56693519-56693538 None:intergenic 50.0%
GAACAGCAGCTTCGGGATAC+TGG - chr2_3:56692989-56693008 Msa0301010:CDS 55.0%
AGCAGCTTCGGGATACTGGA+AGG - chr2_3:56692993-56693012 Msa0301010:CDS 55.0%
!! TCGGGATACTGGAAGGCATC+TGG - chr2_3:56693000-56693019 Msa0301010:CDS 55.0%
GACGTTCTTCACCCCTTGGT+AGG + chr2_3:56693401-56693420 None:intergenic 55.0%
GTAGGACGTTCTTCACCCCT+TGG + chr2_3:56693405-56693424 None:intergenic 55.0%
GAACAGCAGCTTCGGGATAC+TGG - chr2_3:56692989-56693008 Msa0301010:CDS 55.0%
AGCAGCTTCGGGATACTGGA+AGG - chr2_3:56692993-56693012 Msa0301010:CDS 55.0%
!! TCGGGATACTGGAAGGCATC+TGG - chr2_3:56693000-56693019 Msa0301010:CDS 55.0%
GACGTTCTTCACCCCTTGGT+AGG + chr2_3:56693401-56693420 None:intergenic 55.0%
GTAGGACGTTCTTCACCCCT+TGG + chr2_3:56693405-56693424 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 56692630 56693788 56692630 ID=Msa0301010;Name=Msa0301010
chr2_3 mRNA 56692630 56693788 56692630 ID=Msa0301010-mRNA-1;Parent=Msa0301010;Name=Msa0301010-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|319
chr2_3 exon 56693608 56693788 56693608 ID=Msa0301010-mRNA-1:exon:18276;Parent=Msa0301010-mRNA-1
chr2_3 exon 56693224 56693510 56693224 ID=Msa0301010-mRNA-1:exon:18275;Parent=Msa0301010-mRNA-1
chr2_3 exon 56692630 56693121 56692630 ID=Msa0301010-mRNA-1:exon:18274;Parent=Msa0301010-mRNA-1
chr2_3 CDS 56693608 56693788 56693608 ID=Msa0301010-mRNA-1:cds;Parent=Msa0301010-mRNA-1
chr2_3 CDS 56693224 56693510 56693224 ID=Msa0301010-mRNA-1:cds;Parent=Msa0301010-mRNA-1
chr2_3 CDS 56692630 56693121 56692630 ID=Msa0301010-mRNA-1:cds;Parent=Msa0301010-mRNA-1
Gene Sequence

>Msa0301010

ATGGAGGGACAACAAAATGGATCCAAATCAAATTACACTTTTCCACCTGGTTTCAGATTCCATCCTTCTGATGAAGAACTCATAGTTCATTACTTGCAAAACAAAATCAAATCGCGTCCACTTCCAGCGTCGATTATAGCTGAAATTGATCTCTATAAGTATAATCCATGGGAGTTACCTAAGAAGTCTTTGTTTGGTGAGGAAGAATGGTATTTCTTTAGTCCGAGAGACCGAAAGTATCCGAATGGAATAAGACCAAATAGAACAGCAGCTTCGGGATACTGGAAGGCATCTGGAACTGATAAGCCAATAATTTCTTCATGTGCATCAAAGCATATAGGAGTGAAGAAAGCTCTTGTGTTTTATTCAGGTAGACCTCCTAAGGGAGTTAAGACAGATTGGATCATGAATGAGTATAGATTGGTCGACACAACCACGAAATCATTCAAACTCAAAGGTTCCATGCGGTTGGATGACTGGGTATTATGTCGGGTTCGAAATAAAGGCTATTCATCGAAGCATTTATCTGAAAATCAAGAGAATCCTAGTGAACCAACCATACCATTAAACCTACCAAGGGGTGAAGAACGTCCTACAAACGTGAACTTTCGATCTGACATTATCACAGATTATCAGTTCAAAGACTATCAGATCATAGCCTCTATTCTAGTTGGTGGAGTTATACCTCCTCCAACTGAGAACATGTCGAGTTTGAGCGTTAATGGAAGCAAATGCAACAATCTAACTTCAGTTTATGAAGAAGGTTTCAATAAGGTGAATTCTCAAACTGTAATCCCTTCTTTGGAATGTTACTTCAATCCACTAAAAAGAAAATCTAATGAGGATGATGATCAGTTTGAAAATCTCATTTCTTTTAACAGCAAGATCAACACCGAGAACAAATTAGACAAATCTCCTAGCATCGATTTTCAAAAGCTAAACGAATTTACCTTTACATAA
Protein sequence

>Msa0301010

MEGQQNGSKSNYTFPPGFRFHPSDEELIVHYLQNKIKSRPLPASIIAEIDLYKYNPWELPKKSLFGEEEWYFFSPRDRKYPNGIRPNRTAASGYWKASGTDKPIISSCASKHIGVKKALVFYSGRPPKGVKTDWIMNEYRLVDTTTKSFKLKGSMRLDDWVLCRVRNKGYSSKHLSENQENPSEPTIPLNLPRGEERPTNVNFRSDIITDYQFKDYQIIASILVGGVIPPPTENMSSLSVNGSKCNNLTSVYEEGFNKVNSQTVIPSLECYFNPLKRKSNEDDDQFENLISFNSKINTENKLDKSPSIDFQKLNEFTFT*