Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301010 | QDX01706.1 | 94.569 | 313 | 16 | 1 | 1 | 313 | 1 | 312 | 0.0 | 609 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301010 | sp|O49255|NAC29_ARATH | 66.471 | 170 | 55 | 1 | 10 | 179 | 5 | 172 | 1.91e-80 | 248 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301010 | A0A6B7JGD8 | 94.569 | 313 | 16 | 1 | 1 | 313 | 1 | 312 | 0.0 | 609 |
Gene ID | Type | Classification |
---|---|---|
Msa0301010 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301010 | MtrunA17_Chr2g0326361 | 93.730 | 319 | 19 | 1 | 1 | 319 | 1 | 318 | 0.0 | 608 |
Msa0301010 | MtrunA17_Chr7g0263931 | 48.182 | 330 | 140 | 5 | 10 | 319 | 7 | 325 | 4.21e-95 | 285 |
Msa0301010 | MtrunA17_Chr5g0417791 | 66.471 | 170 | 55 | 1 | 14 | 183 | 3 | 170 | 1.87e-82 | 250 |
Msa0301010 | MtrunA17_Chr4g0042561 | 65.318 | 173 | 58 | 1 | 8 | 180 | 3 | 173 | 1.04e-80 | 246 |
Msa0301010 | MtrunA17_Chr2g0318101 | 64.815 | 162 | 50 | 1 | 14 | 168 | 15 | 176 | 5.47e-79 | 244 |
Msa0301010 | MtrunA17_Chr4g0047841 | 63.483 | 178 | 46 | 2 | 14 | 172 | 15 | 192 | 3.17e-78 | 242 |
Msa0301010 | MtrunA17_Chr7g0252971 | 65.714 | 175 | 51 | 4 | 14 | 180 | 8 | 181 | 4.73e-78 | 241 |
Msa0301010 | MtrunA17_Chr3g0124761 | 64.780 | 159 | 52 | 2 | 10 | 168 | 3 | 157 | 4.94e-72 | 224 |
Msa0301010 | MtrunA17_Chr8g0384721 | 54.595 | 185 | 74 | 2 | 14 | 191 | 7 | 188 | 1.56e-69 | 218 |
Msa0301010 | MtrunA17_Chr2g0318081 | 58.537 | 164 | 62 | 2 | 10 | 173 | 12 | 169 | 2.59e-67 | 214 |
Msa0301010 | MtrunA17_Chr8g0359921 | 60.976 | 164 | 60 | 2 | 10 | 173 | 10 | 169 | 4.51e-66 | 210 |
Msa0301010 | MtrunA17_Chr3g0130731 | 60.000 | 155 | 58 | 2 | 14 | 168 | 7 | 157 | 1.02e-64 | 206 |
Msa0301010 | MtrunA17_Chr5g0417001 | 50.000 | 178 | 85 | 2 | 1 | 174 | 1 | 178 | 5.08e-59 | 194 |
Msa0301010 | MtrunA17_Chr8g0361731 | 50.867 | 173 | 80 | 2 | 1 | 168 | 1 | 173 | 8.60e-57 | 188 |
Msa0301010 | MtrunA17_Chr6g0453131 | 50.847 | 177 | 78 | 3 | 16 | 187 | 17 | 189 | 1.78e-54 | 182 |
Msa0301010 | MtrunA17_Chr3g0139331 | 45.813 | 203 | 102 | 4 | 4 | 205 | 2 | 197 | 1.71e-53 | 178 |
Msa0301010 | MtrunA17_Chr1g0147421 | 46.602 | 206 | 89 | 5 | 1 | 203 | 15 | 202 | 4.29e-53 | 178 |
Msa0301010 | MtrunA17_Chr6g0481091 | 48.810 | 168 | 78 | 3 | 14 | 179 | 6 | 167 | 1.29e-52 | 173 |
Msa0301010 | MtrunA17_Chr2g0309891 | 50.633 | 158 | 71 | 3 | 13 | 168 | 5 | 157 | 1.34e-52 | 176 |
Msa0301010 | MtrunA17_Chr2g0316971 | 54.194 | 155 | 69 | 1 | 14 | 168 | 23 | 175 | 3.19e-52 | 176 |
Msa0301010 | MtrunA17_Chr6g0453451 | 50.000 | 168 | 80 | 2 | 8 | 175 | 14 | 177 | 3.72e-52 | 174 |
Msa0301010 | MtrunA17_Chr6g0484441 | 50.625 | 160 | 71 | 2 | 14 | 173 | 5 | 156 | 1.65e-51 | 172 |
Msa0301010 | MtrunA17_Chr7g0214071 | 53.947 | 152 | 61 | 2 | 14 | 165 | 15 | 157 | 3.09e-51 | 170 |
Msa0301010 | MtrunA17_Chr4g0076731 | 47.458 | 177 | 76 | 4 | 16 | 192 | 56 | 215 | 2.47e-50 | 172 |
Msa0301010 | MtrunA17_Chr4g0060931 | 49.412 | 170 | 70 | 4 | 14 | 176 | 17 | 177 | 4.07e-50 | 170 |
Msa0301010 | MtrunA17_Chr3g0091921 | 49.697 | 165 | 79 | 3 | 9 | 173 | 11 | 171 | 1.47e-49 | 167 |
Msa0301010 | MtrunA17_Chr5g0433781 | 52.795 | 161 | 62 | 4 | 13 | 168 | 5 | 156 | 1.63e-49 | 174 |
Msa0301010 | MtrunA17_Chr2g0309331 | 44.503 | 191 | 94 | 4 | 13 | 200 | 9 | 190 | 9.82e-49 | 166 |
Msa0301010 | MtrunA17_Chr7g0253011 | 49.390 | 164 | 79 | 3 | 7 | 168 | 10 | 171 | 1.27e-48 | 167 |
Msa0301010 | MtrunA17_Chr1g0183741 | 44.318 | 176 | 90 | 2 | 13 | 188 | 9 | 176 | 1.58e-48 | 163 |
Msa0301010 | MtrunA17_Chr5g0442771 | 47.458 | 177 | 87 | 3 | 16 | 186 | 20 | 196 | 1.68e-48 | 164 |
Msa0301010 | MtrunA17_Chr4g0018391 | 50.943 | 159 | 63 | 4 | 15 | 168 | 8 | 156 | 3.93e-48 | 164 |
Msa0301010 | MtrunA17_Chr4g0054791 | 45.810 | 179 | 88 | 4 | 13 | 187 | 5 | 178 | 5.40e-48 | 163 |
Msa0301010 | MtrunA17_Chr3g0109821 | 51.266 | 158 | 70 | 4 | 13 | 168 | 5 | 157 | 1.05e-47 | 169 |
Msa0301010 | MtrunA17_Chr8g0385991 | 51.299 | 154 | 70 | 3 | 14 | 165 | 14 | 164 | 1.69e-47 | 159 |
Msa0301010 | MtrunA17_Chr4g0017921 | 49.390 | 164 | 71 | 3 | 8 | 168 | 2 | 156 | 6.52e-47 | 161 |
Msa0301010 | MtrunA17_Chr8g0346001 | 41.791 | 201 | 94 | 4 | 15 | 194 | 16 | 214 | 8.12e-47 | 163 |
Msa0301010 | MtrunA17_Chr6g0461661 | 46.746 | 169 | 84 | 3 | 1 | 165 | 1 | 167 | 1.52e-46 | 161 |
Msa0301010 | MtrunA17_Chr7g0261411 | 48.366 | 153 | 71 | 2 | 13 | 165 | 9 | 153 | 1.99e-46 | 158 |
Msa0301010 | MtrunA17_Chr8g0372121 | 44.767 | 172 | 84 | 3 | 15 | 183 | 7 | 170 | 3.18e-46 | 158 |
Msa0301010 | MtrunA17_Chr4g0038751 | 38.627 | 233 | 121 | 4 | 16 | 239 | 17 | 236 | 5.00e-46 | 157 |
Msa0301010 | MtrunA17_Chr5g0405211 | 48.408 | 157 | 70 | 3 | 15 | 168 | 9 | 157 | 5.68e-46 | 159 |
Msa0301010 | MtrunA17_Chr2g0311661 | 45.238 | 168 | 82 | 4 | 16 | 173 | 23 | 190 | 8.84e-46 | 157 |
Msa0301010 | MtrunA17_Chr2g0311651 | 45.665 | 173 | 83 | 5 | 16 | 177 | 24 | 196 | 9.45e-46 | 157 |
Msa0301010 | MtrunA17_Chr1g0200561 | 47.771 | 157 | 71 | 3 | 15 | 168 | 20 | 168 | 3.01e-45 | 157 |
Msa0301010 | MtrunA17_Chr5g0398971 | 47.799 | 159 | 70 | 4 | 15 | 168 | 8 | 158 | 3.20e-45 | 157 |
Msa0301010 | MtrunA17_Chr4g0056541 | 47.134 | 157 | 72 | 3 | 15 | 168 | 8 | 156 | 4.22e-45 | 157 |
Msa0301010 | MtrunA17_Chr3g0144271 | 53.731 | 134 | 61 | 1 | 9 | 141 | 18 | 151 | 1.26e-44 | 157 |
Msa0301010 | MtrunA17_Chr5g0400461 | 45.399 | 163 | 75 | 3 | 13 | 168 | 5 | 160 | 1.58e-44 | 155 |
Msa0301010 | MtrunA17_Chr2g0312321 | 46.711 | 152 | 74 | 3 | 14 | 165 | 11 | 155 | 4.18e-44 | 153 |
Msa0301010 | MtrunA17_Chr3g0131911 | 49.686 | 159 | 74 | 4 | 14 | 168 | 14 | 170 | 9.59e-43 | 147 |
Msa0301010 | MtrunA17_Chr1g0201021 | 51.562 | 128 | 58 | 2 | 16 | 141 | 21 | 146 | 2.85e-41 | 150 |
Msa0301010 | MtrunA17_Chr7g0217711 | 51.562 | 128 | 60 | 1 | 14 | 141 | 19 | 144 | 4.16e-41 | 141 |
Msa0301010 | MtrunA17_Chr7g0217721 | 42.197 | 173 | 87 | 2 | 14 | 175 | 19 | 189 | 5.10e-41 | 146 |
Msa0301010 | MtrunA17_Chr3g0130101 | 45.161 | 155 | 77 | 4 | 16 | 168 | 9 | 157 | 7.77e-41 | 145 |
Msa0301010 | MtrunA17_Chr1g0197351 | 46.250 | 160 | 80 | 3 | 13 | 168 | 41 | 198 | 1.68e-40 | 147 |
Msa0301010 | MtrunA17_Chr5g0428991 | 44.693 | 179 | 86 | 6 | 14 | 186 | 25 | 196 | 1.30e-39 | 147 |
Msa0301010 | MtrunA17_Chr3g0128151 | 45.556 | 180 | 88 | 5 | 13 | 189 | 21 | 193 | 3.56e-39 | 145 |
Msa0301010 | MtrunA17_Chr1g0197361 | 40.107 | 187 | 91 | 6 | 16 | 189 | 10 | 188 | 5.55e-39 | 145 |
Msa0301010 | MtrunA17_Chr8g0364791 | 43.226 | 155 | 80 | 4 | 16 | 168 | 8 | 156 | 9.00e-38 | 139 |
Msa0301010 | MtrunA17_Chr3g0092671 | 38.710 | 186 | 95 | 5 | 16 | 189 | 7 | 185 | 6.16e-37 | 138 |
Msa0301010 | MtrunA17_Chr3g0128111 | 41.436 | 181 | 90 | 4 | 17 | 191 | 45 | 215 | 7.62e-37 | 132 |
Msa0301010 | MtrunA17_Chr8g0345671 | 40.761 | 184 | 92 | 6 | 11 | 181 | 8 | 187 | 1.21e-36 | 135 |
Msa0301010 | MtrunA17_Chr8g0384201 | 35.023 | 217 | 125 | 5 | 16 | 222 | 8 | 218 | 1.63e-36 | 137 |
Msa0301010 | MtrunA17_Chr4g0026141 | 44.654 | 159 | 77 | 5 | 14 | 165 | 5 | 159 | 2.65e-35 | 129 |
Msa0301010 | MtrunA17_Chr4g0050701 | 37.580 | 157 | 88 | 2 | 14 | 168 | 11 | 159 | 1.21e-33 | 122 |
Msa0301010 | MtrunA17_Chr7g0266701 | 35.821 | 201 | 118 | 5 | 14 | 207 | 4 | 200 | 1.83e-33 | 124 |
Msa0301010 | MtrunA17_Chr8g0345691 | 37.634 | 186 | 87 | 6 | 15 | 181 | 13 | 188 | 3.57e-32 | 124 |
Msa0301010 | MtrunA17_Chr2g0321631 | 41.509 | 159 | 81 | 5 | 15 | 165 | 5 | 159 | 2.88e-31 | 117 |
Msa0301010 | MtrunA17_Chr2g0321741 | 40.909 | 154 | 72 | 5 | 35 | 182 | 13 | 153 | 4.56e-30 | 117 |
Msa0301010 | MtrunA17_Chr8g0345711 | 37.888 | 161 | 89 | 5 | 13 | 163 | 11 | 170 | 6.73e-30 | 112 |
Msa0301010 | MtrunA17_Chr8g0384351 | 37.654 | 162 | 75 | 5 | 7 | 168 | 3 | 138 | 2.25e-27 | 105 |
Msa0301010 | MtrunA17_Chr8g0345731 | 39.394 | 132 | 75 | 3 | 14 | 140 | 24 | 155 | 1.29e-26 | 103 |
Msa0301010 | MtrunA17_Chr3g0113001 | 50.495 | 101 | 47 | 2 | 65 | 165 | 16 | 113 | 5.10e-26 | 105 |
Msa0301010 | MtrunA17_Chr8g0345721 | 35.329 | 167 | 70 | 4 | 13 | 142 | 29 | 194 | 1.66e-25 | 101 |
Msa0301010 | MtrunA17_Chr8g0345741 | 41.176 | 119 | 66 | 3 | 25 | 140 | 2 | 119 | 4.01e-24 | 96.3 |
Msa0301010 | MtrunA17_Chr7g0243371 | 54.667 | 75 | 34 | 0 | 67 | 141 | 17 | 91 | 3.64e-23 | 92.4 |
Msa0301010 | MtrunA17_Chr3g0113031 | 50.562 | 89 | 42 | 1 | 77 | 165 | 3 | 89 | 8.83e-22 | 92.8 |
Msa0301010 | MtrunA17_Chr3g0130321 | 35.976 | 164 | 81 | 8 | 14 | 165 | 7 | 158 | 1.16e-21 | 90.9 |
Msa0301010 | MtrunA17_Chr8g0345701 | 33.557 | 149 | 79 | 5 | 9 | 140 | 2 | 147 | 1.62e-20 | 87.0 |
Msa0301010 | MtrunA17_Chr7g0251651 | 27.711 | 166 | 112 | 5 | 8 | 169 | 12 | 173 | 1.29e-15 | 73.9 |
Msa0301010 | MtrunA17_Chr7g0274971 | 32.544 | 169 | 92 | 7 | 20 | 175 | 11 | 170 | 3.78e-15 | 73.2 |
Msa0301010 | MtrunA17_Chr1g0168571 | 31.111 | 180 | 99 | 9 | 22 | 188 | 13 | 180 | 1.11e-11 | 64.7 |
Msa0301010 | MtrunA17_Chr3g0113011 | 55.319 | 47 | 21 | 0 | 14 | 60 | 19 | 65 | 1.35e-11 | 59.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0301010 | AT1G69490.1 | 66.471 | 170 | 55 | 1 | 10 | 179 | 5 | 172 | 1.95e-81 | 248 |
Msa0301010 | AT1G61110.1 | 66.860 | 172 | 40 | 3 | 14 | 173 | 16 | 182 | 1.58e-79 | 245 |
Msa0301010 | AT3G15510.1 | 61.988 | 171 | 58 | 1 | 18 | 181 | 21 | 191 | 2.44e-77 | 241 |
Msa0301010 | AT1G77450.1 | 63.975 | 161 | 54 | 2 | 8 | 168 | 4 | 160 | 1.79e-73 | 227 |
Msa0301010 | AT3G04070.2 | 56.842 | 190 | 67 | 3 | 13 | 187 | 9 | 198 | 1.83e-72 | 228 |
Msa0301010 | AT1G01720.1 | 66.452 | 155 | 49 | 1 | 14 | 168 | 7 | 158 | 4.76e-72 | 224 |
Msa0301010 | AT3G04070.1 | 54.369 | 206 | 63 | 4 | 13 | 187 | 9 | 214 | 6.66e-72 | 227 |
Msa0301010 | AT5G08790.1 | 57.778 | 180 | 72 | 2 | 9 | 187 | 2 | 178 | 1.66e-69 | 218 |
Msa0301010 | AT1G52880.1 | 67.702 | 161 | 46 | 3 | 18 | 172 | 21 | 181 | 4.57e-69 | 218 |
Msa0301010 | AT5G63790.1 | 57.865 | 178 | 70 | 3 | 9 | 184 | 45 | 219 | 5.27e-69 | 218 |
Msa0301010 | AT5G63790.2 | 57.865 | 178 | 70 | 3 | 9 | 184 | 55 | 229 | 6.92e-69 | 218 |
Msa0301010 | AT3G15500.1 | 57.988 | 169 | 65 | 2 | 10 | 178 | 10 | 172 | 5.68e-67 | 213 |
Msa0301010 | AT4G27410.2 | 57.317 | 164 | 64 | 2 | 10 | 173 | 10 | 167 | 1.10e-66 | 211 |
Msa0301010 | AT1G52890.1 | 57.225 | 173 | 68 | 2 | 1 | 173 | 1 | 167 | 1.71e-66 | 211 |
Msa0301010 | AT4G27410.3 | 51.934 | 181 | 64 | 3 | 10 | 173 | 10 | 184 | 2.50e-62 | 201 |
Msa0301010 | AT2G24430.2 | 50.588 | 170 | 79 | 2 | 4 | 173 | 6 | 170 | 2.62e-55 | 182 |
Msa0301010 | AT2G24430.1 | 50.588 | 170 | 79 | 2 | 4 | 173 | 6 | 170 | 2.62e-55 | 182 |
Msa0301010 | AT1G26870.1 | 52.532 | 158 | 70 | 1 | 16 | 168 | 18 | 175 | 1.79e-54 | 183 |
Msa0301010 | AT5G39820.1 | 42.654 | 211 | 104 | 3 | 16 | 209 | 22 | 232 | 4.15e-54 | 180 |
Msa0301010 | AT1G76420.1 | 51.613 | 155 | 70 | 1 | 14 | 168 | 22 | 171 | 2.29e-53 | 178 |
Msa0301010 | AT5G53950.1 | 52.147 | 163 | 75 | 2 | 6 | 168 | 10 | 169 | 4.18e-53 | 179 |
Msa0301010 | AT5G07680.1 | 51.852 | 162 | 74 | 3 | 14 | 175 | 17 | 174 | 1.02e-52 | 176 |
Msa0301010 | AT5G07680.2 | 51.852 | 162 | 74 | 3 | 14 | 175 | 3 | 160 | 1.08e-52 | 176 |
Msa0301010 | AT3G15170.1 | 52.980 | 151 | 69 | 1 | 15 | 165 | 21 | 169 | 1.77e-51 | 172 |
Msa0301010 | AT5G13180.1 | 53.947 | 152 | 62 | 3 | 14 | 165 | 14 | 157 | 1.87e-51 | 171 |
Msa0301010 | AT3G04060.1 | 48.295 | 176 | 88 | 3 | 5 | 180 | 11 | 183 | 1.89e-51 | 173 |
Msa0301010 | AT5G39610.1 | 51.250 | 160 | 64 | 3 | 14 | 168 | 20 | 170 | 2.49e-51 | 171 |
Msa0301010 | AT5G61430.1 | 50.617 | 162 | 76 | 3 | 14 | 175 | 16 | 173 | 3.26e-51 | 172 |
Msa0301010 | AT3G17730.1 | 50.888 | 169 | 74 | 5 | 14 | 179 | 6 | 168 | 3.34e-51 | 170 |
Msa0301010 | AT2G02450.1 | 54.000 | 150 | 62 | 3 | 16 | 165 | 53 | 195 | 8.13e-51 | 172 |
Msa0301010 | AT2G02450.2 | 54.000 | 150 | 62 | 3 | 16 | 165 | 53 | 195 | 8.67e-51 | 174 |
Msa0301010 | AT1G65910.1 | 50.000 | 170 | 77 | 4 | 13 | 180 | 5 | 168 | 1.12e-50 | 177 |
Msa0301010 | AT3G03200.1 | 51.250 | 160 | 67 | 4 | 13 | 168 | 5 | 157 | 2.25e-50 | 174 |
Msa0301010 | AT3G18400.1 | 49.375 | 160 | 74 | 2 | 14 | 173 | 5 | 157 | 3.91e-50 | 169 |
Msa0301010 | AT5G18270.1 | 47.283 | 184 | 83 | 4 | 6 | 189 | 13 | 182 | 5.58e-50 | 169 |
Msa0301010 | AT5G18270.2 | 47.283 | 184 | 83 | 4 | 6 | 189 | 13 | 182 | 1.44e-49 | 168 |
Msa0301010 | AT3G29035.1 | 58.594 | 128 | 51 | 1 | 14 | 141 | 24 | 149 | 1.59e-49 | 167 |
Msa0301010 | AT2G33480.1 | 52.632 | 152 | 63 | 3 | 14 | 165 | 15 | 157 | 1.97e-49 | 166 |
Msa0301010 | AT5G17260.1 | 50.625 | 160 | 68 | 4 | 13 | 168 | 5 | 157 | 2.34e-49 | 171 |
Msa0301010 | AT2G33480.2 | 52.632 | 152 | 61 | 3 | 14 | 165 | 15 | 155 | 3.25e-49 | 165 |
Msa0301010 | AT5G46590.1 | 50.000 | 178 | 78 | 5 | 14 | 187 | 6 | 176 | 3.78e-49 | 166 |
Msa0301010 | AT2G43000.1 | 49.333 | 150 | 71 | 2 | 16 | 165 | 20 | 164 | 4.35e-49 | 165 |
Msa0301010 | AT1G79580.3 | 49.686 | 159 | 69 | 3 | 13 | 168 | 16 | 166 | 4.76e-48 | 165 |
Msa0301010 | AT1G79580.5 | 49.686 | 159 | 69 | 3 | 13 | 168 | 16 | 166 | 4.76e-48 | 165 |
Msa0301010 | AT1G79580.4 | 49.686 | 159 | 69 | 3 | 13 | 168 | 16 | 166 | 4.76e-48 | 165 |
Msa0301010 | AT1G79580.2 | 49.686 | 159 | 69 | 3 | 13 | 168 | 16 | 166 | 4.76e-48 | 165 |
Msa0301010 | AT1G79580.1 | 49.686 | 159 | 69 | 3 | 13 | 168 | 16 | 166 | 4.76e-48 | 165 |
Msa0301010 | AT4G10350.1 | 50.617 | 162 | 71 | 3 | 7 | 165 | 2 | 157 | 5.69e-48 | 164 |
Msa0301010 | AT2G17040.1 | 42.180 | 211 | 102 | 5 | 16 | 220 | 8 | 204 | 7.43e-48 | 162 |
Msa0301010 | AT4G17980.1 | 50.307 | 163 | 67 | 5 | 13 | 168 | 5 | 160 | 2.36e-47 | 160 |
Msa0301010 | AT4G17980.2 | 50.307 | 163 | 67 | 5 | 13 | 168 | 5 | 160 | 2.94e-47 | 161 |
Msa0301010 | AT1G33280.1 | 50.610 | 164 | 69 | 3 | 8 | 168 | 2 | 156 | 3.06e-47 | 161 |
Msa0301010 | AT1G71930.2 | 47.799 | 159 | 72 | 3 | 13 | 168 | 8 | 158 | 4.31e-47 | 161 |
Msa0301010 | AT1G71930.1 | 47.799 | 159 | 72 | 3 | 13 | 168 | 8 | 158 | 4.31e-47 | 161 |
Msa0301010 | AT1G56010.2 | 42.222 | 180 | 100 | 3 | 14 | 192 | 19 | 195 | 4.10e-46 | 159 |
Msa0301010 | AT4G28530.1 | 46.286 | 175 | 70 | 3 | 14 | 172 | 10 | 176 | 5.41e-46 | 159 |
Msa0301010 | AT4G36160.1 | 47.799 | 159 | 72 | 3 | 13 | 168 | 9 | 159 | 7.33e-46 | 160 |
Msa0301010 | AT4G36160.3 | 47.799 | 159 | 72 | 3 | 13 | 168 | 9 | 159 | 7.33e-46 | 160 |
Msa0301010 | AT4G36160.2 | 47.799 | 159 | 72 | 3 | 13 | 168 | 13 | 163 | 7.75e-46 | 160 |
Msa0301010 | AT5G46590.2 | 54.074 | 135 | 59 | 2 | 14 | 146 | 6 | 139 | 1.01e-45 | 157 |
Msa0301010 | AT3G10480.1 | 47.205 | 161 | 78 | 3 | 10 | 168 | 23 | 178 | 1.38e-45 | 160 |
Msa0301010 | AT1G12260.2 | 48.408 | 157 | 70 | 3 | 15 | 168 | 8 | 156 | 1.48e-45 | 158 |
Msa0301010 | AT2G18060.3 | 47.170 | 159 | 73 | 3 | 13 | 168 | 8 | 158 | 1.48e-45 | 159 |
Msa0301010 | AT2G18060.1 | 47.170 | 159 | 73 | 3 | 13 | 168 | 8 | 158 | 1.48e-45 | 159 |
Msa0301010 | AT1G12260.1 | 48.701 | 154 | 68 | 3 | 15 | 165 | 8 | 153 | 2.97e-45 | 159 |
Msa0301010 | AT3G10480.2 | 47.826 | 161 | 76 | 4 | 10 | 168 | 23 | 177 | 3.84e-45 | 159 |
Msa0301010 | AT5G66300.1 | 47.799 | 159 | 73 | 3 | 13 | 168 | 11 | 162 | 5.05e-45 | 155 |
Msa0301010 | AT1G54330.1 | 47.468 | 158 | 72 | 3 | 13 | 168 | 5 | 153 | 7.61e-45 | 155 |
Msa0301010 | AT1G32770.1 | 46.988 | 166 | 76 | 5 | 15 | 170 | 17 | 180 | 8.63e-45 | 156 |
Msa0301010 | AT3G10490.1 | 46.203 | 158 | 78 | 3 | 13 | 168 | 26 | 178 | 1.39e-44 | 152 |
Msa0301010 | AT1G62700.1 | 46.584 | 161 | 75 | 3 | 15 | 172 | 8 | 160 | 2.78e-44 | 156 |
Msa0301010 | AT1G62700.2 | 46.584 | 161 | 75 | 3 | 15 | 172 | 8 | 160 | 2.78e-44 | 156 |
Msa0301010 | AT5G62380.2 | 46.835 | 158 | 73 | 3 | 14 | 168 | 7 | 156 | 4.05e-44 | 154 |
Msa0301010 | AT5G62380.1 | 46.835 | 158 | 73 | 3 | 14 | 168 | 7 | 156 | 4.05e-44 | 154 |
Msa0301010 | AT1G32510.1 | 47.826 | 161 | 70 | 4 | 14 | 165 | 6 | 161 | 5.72e-44 | 152 |
Msa0301010 | AT3G12977.1 | 41.040 | 173 | 97 | 2 | 14 | 186 | 18 | 185 | 1.49e-43 | 151 |
Msa0301010 | AT2G46770.1 | 44.578 | 166 | 78 | 4 | 15 | 168 | 17 | 180 | 2.59e-43 | 152 |
Msa0301010 | AT3G10490.2 | 46.203 | 158 | 78 | 3 | 13 | 168 | 26 | 178 | 6.15e-43 | 154 |
Msa0301010 | AT3G10500.1 | 45.732 | 164 | 81 | 3 | 7 | 168 | 2 | 159 | 1.49e-42 | 154 |
Msa0301010 | AT1G33060.2 | 50.000 | 158 | 71 | 4 | 13 | 168 | 23 | 174 | 2.29e-42 | 155 |
Msa0301010 | AT1G33060.1 | 50.000 | 158 | 71 | 4 | 13 | 168 | 23 | 174 | 2.65e-42 | 155 |
Msa0301010 | AT3G10480.3 | 40.206 | 194 | 76 | 4 | 10 | 168 | 23 | 211 | 4.63e-42 | 152 |
Msa0301010 | AT4G35580.3 | 53.676 | 136 | 59 | 2 | 7 | 140 | 2 | 135 | 1.11e-41 | 152 |
Msa0301010 | AT4G35580.2 | 53.676 | 136 | 59 | 2 | 7 | 140 | 2 | 135 | 1.21e-41 | 152 |
Msa0301010 | AT4G35580.1 | 53.676 | 136 | 59 | 2 | 7 | 140 | 2 | 135 | 1.67e-41 | 151 |
Msa0301010 | AT1G34180.3 | 51.562 | 128 | 58 | 2 | 16 | 141 | 18 | 143 | 2.45e-41 | 149 |
Msa0301010 | AT1G34180.1 | 51.562 | 128 | 58 | 2 | 16 | 141 | 18 | 143 | 1.11e-40 | 149 |
Msa0301010 | AT3G12910.1 | 44.767 | 172 | 77 | 5 | 16 | 173 | 23 | 190 | 1.60e-40 | 144 |
Msa0301010 | AT3G61910.1 | 41.477 | 176 | 85 | 4 | 14 | 175 | 11 | 182 | 1.84e-40 | 144 |
Msa0301010 | AT5G04410.1 | 39.896 | 193 | 99 | 4 | 7 | 188 | 2 | 188 | 2.47e-40 | 149 |
Msa0301010 | AT1G34190.1 | 50.000 | 128 | 60 | 2 | 16 | 141 | 18 | 143 | 2.79e-40 | 148 |
Msa0301010 | AT5G24590.2 | 51.128 | 133 | 62 | 2 | 13 | 143 | 12 | 143 | 1.88e-39 | 144 |
Msa0301010 | AT3G44290.2 | 35.714 | 196 | 101 | 5 | 16 | 210 | 16 | 187 | 2.28e-38 | 136 |
Msa0301010 | AT5G09330.5 | 41.935 | 155 | 82 | 3 | 16 | 168 | 8 | 156 | 2.64e-38 | 142 |
Msa0301010 | AT5G09330.2 | 41.935 | 155 | 82 | 3 | 16 | 168 | 8 | 156 | 2.64e-38 | 142 |
Msa0301010 | AT5G09330.4 | 41.935 | 155 | 82 | 3 | 16 | 168 | 8 | 156 | 2.64e-38 | 142 |
Msa0301010 | AT5G09330.3 | 41.935 | 155 | 82 | 3 | 16 | 168 | 8 | 156 | 2.64e-38 | 142 |
Msa0301010 | AT5G09330.1 | 41.935 | 155 | 82 | 3 | 16 | 168 | 8 | 156 | 2.64e-38 | 142 |
Msa0301010 | AT1G34180.4 | 47.143 | 140 | 58 | 3 | 16 | 141 | 18 | 155 | 3.18e-38 | 141 |
Msa0301010 | AT1G34180.2 | 47.143 | 140 | 58 | 3 | 16 | 141 | 18 | 155 | 1.24e-37 | 141 |
Msa0301010 | AT3G44290.1 | 35.714 | 196 | 101 | 5 | 16 | 210 | 16 | 187 | 2.48e-37 | 136 |
Msa0301010 | AT2G27300.1 | 33.333 | 234 | 134 | 6 | 16 | 237 | 16 | 239 | 2.96e-37 | 136 |
Msa0301010 | AT3G49530.2 | 47.368 | 133 | 67 | 2 | 13 | 143 | 12 | 143 | 6.92e-37 | 137 |
Msa0301010 | AT3G49530.1 | 48.462 | 130 | 64 | 2 | 13 | 140 | 12 | 140 | 8.84e-37 | 137 |
Msa0301010 | AT5G22290.1 | 42.593 | 162 | 79 | 4 | 13 | 172 | 20 | 169 | 1.28e-36 | 134 |
Msa0301010 | AT5G64060.1 | 38.922 | 167 | 93 | 4 | 14 | 177 | 6 | 166 | 7.56e-36 | 132 |
Msa0301010 | AT5G04395.1 | 40.940 | 149 | 74 | 2 | 8 | 142 | 22 | 170 | 2.80e-34 | 124 |
Msa0301010 | AT1G32870.2 | 44.578 | 166 | 84 | 4 | 8 | 171 | 4 | 163 | 3.21e-34 | 131 |
Msa0301010 | AT1G32870.1 | 44.311 | 167 | 85 | 4 | 8 | 172 | 4 | 164 | 3.47e-34 | 131 |
Msa0301010 | AT1G32870.3 | 44.311 | 167 | 85 | 4 | 8 | 172 | 40 | 200 | 4.02e-34 | 131 |
Msa0301010 | AT5G64530.1 | 36.158 | 177 | 91 | 3 | 14 | 180 | 3 | 167 | 2.23e-32 | 119 |
Msa0301010 | AT5G64530.2 | 43.077 | 130 | 62 | 2 | 14 | 143 | 3 | 120 | 5.19e-32 | 117 |
Msa0301010 | AT5G22380.1 | 38.596 | 171 | 96 | 4 | 17 | 181 | 8 | 175 | 5.90e-32 | 119 |
Msa0301010 | AT4G28530.2 | 38.286 | 175 | 47 | 4 | 14 | 172 | 10 | 139 | 1.02e-29 | 115 |
Msa0301010 | AT3G44350.2 | 38.710 | 186 | 93 | 8 | 17 | 192 | 8 | 182 | 1.04e-29 | 114 |
Msa0301010 | AT3G44350.1 | 42.446 | 139 | 70 | 4 | 17 | 148 | 8 | 143 | 3.36e-29 | 110 |
Msa0301010 | AT5G61430.2 | 48.649 | 111 | 53 | 3 | 65 | 175 | 4 | 110 | 7.50e-29 | 112 |
Msa0301010 | AT1G56010.1 | 42.308 | 130 | 72 | 2 | 63 | 192 | 2 | 128 | 1.02e-28 | 111 |
Msa0301010 | AT4G01520.1 | 39.634 | 164 | 85 | 6 | 15 | 173 | 5 | 159 | 6.15e-28 | 110 |
Msa0301010 | AT4G01550.1 | 38.983 | 177 | 94 | 6 | 17 | 189 | 7 | 173 | 9.06e-28 | 112 |
Msa0301010 | AT4G10350.2 | 53.535 | 99 | 40 | 2 | 67 | 165 | 18 | 110 | 2.74e-27 | 108 |
Msa0301010 | AT2G33480.3 | 51.515 | 99 | 42 | 2 | 67 | 165 | 8 | 100 | 6.39e-27 | 105 |
Msa0301010 | AT3G12977.2 | 42.975 | 121 | 64 | 2 | 66 | 186 | 17 | 132 | 7.88e-27 | 105 |
Msa0301010 | AT4G01540.3 | 38.272 | 162 | 86 | 6 | 17 | 173 | 7 | 159 | 6.77e-26 | 107 |
Msa0301010 | AT4G01540.4 | 38.272 | 162 | 86 | 6 | 17 | 173 | 7 | 159 | 8.07e-26 | 106 |
Msa0301010 | AT4G01540.2 | 38.272 | 162 | 86 | 6 | 17 | 173 | 7 | 159 | 8.42e-26 | 106 |
Msa0301010 | AT4G01540.1 | 38.272 | 162 | 86 | 6 | 17 | 173 | 7 | 159 | 8.54e-26 | 107 |
Msa0301010 | AT3G04420.2 | 35.849 | 159 | 87 | 4 | 15 | 169 | 4 | 151 | 1.41e-25 | 103 |
Msa0301010 | AT3G04420.1 | 35.849 | 159 | 87 | 4 | 15 | 169 | 4 | 151 | 3.02e-25 | 103 |
Msa0301010 | AT1G02230.1 | 37.692 | 130 | 73 | 4 | 15 | 139 | 4 | 130 | 2.04e-22 | 96.7 |
Msa0301010 | AT1G01010.1 | 34.054 | 185 | 95 | 7 | 17 | 188 | 6 | 176 | 2.16e-21 | 94.4 |
Msa0301010 | AT2G43000.2 | 46.667 | 90 | 43 | 2 | 76 | 165 | 2 | 86 | 2.14e-20 | 87.8 |
Msa0301010 | AT5G14000.2 | 37.405 | 131 | 76 | 3 | 14 | 142 | 15 | 141 | 2.94e-20 | 86.3 |
Msa0301010 | AT5G14000.1 | 37.405 | 131 | 76 | 3 | 14 | 142 | 15 | 141 | 1.06e-19 | 85.9 |
Msa0301010 | AT1G02250.1 | 31.875 | 160 | 93 | 5 | 15 | 169 | 4 | 152 | 1.71e-19 | 88.2 |
Msa0301010 | AT1G02220.1 | 37.209 | 129 | 72 | 4 | 15 | 139 | 4 | 127 | 2.27e-19 | 88.2 |
Msa0301010 | AT3G56530.1 | 34.058 | 138 | 80 | 4 | 8 | 139 | 46 | 178 | 1.75e-16 | 79.3 |
Msa0301010 | AT3G10490.4 | 46.341 | 82 | 39 | 2 | 87 | 168 | 2 | 78 | 2.04e-16 | 79.3 |
Msa0301010 | AT3G10490.3 | 46.341 | 82 | 39 | 2 | 87 | 168 | 2 | 78 | 2.04e-16 | 79.3 |
Msa0301010 | AT5G50820.1 | 33.333 | 141 | 68 | 7 | 14 | 144 | 17 | 141 | 2.62e-14 | 70.9 |
Msa0301010 | AT3G55210.1 | 28.994 | 169 | 94 | 6 | 12 | 165 | 9 | 166 | 7.74e-14 | 70.9 |
Msa0301010 | AT2G18060.2 | 44.156 | 77 | 35 | 2 | 92 | 168 | 2 | 70 | 4.62e-13 | 68.9 |
Msa0301010 | AT5G22290.2 | 46.914 | 81 | 30 | 3 | 93 | 172 | 2 | 70 | 1.08e-12 | 67.0 |
Msa0301010 | AT1G28470.1 | 32.877 | 146 | 77 | 8 | 13 | 141 | 76 | 217 | 2.74e-11 | 63.9 |
Msa0301010 | AT3G04430.1 | 37.500 | 104 | 61 | 4 | 20 | 121 | 6 | 107 | 9.76e-11 | 60.8 |
Find 65 sgRNAs with CRISPR-Local
Find 148 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GATGCACATGAAGAAATTAT+TGG | 0.175721 | 2_3:+56693363 | None:intergenic |
TCACCCCTTGGTAGGTTTAA+TGG | 0.204888 | 2_3:+56693006 | None:intergenic |
ATGTCGAGTTTGAGCGTTAA+TGG | 0.222020 | 2_3:-56692865 | Msa0301010:CDS |
TCAAACTGTAATCCCTTCTT+TGG | 0.246326 | 2_3:-56692785 | Msa0301010:CDS |
TGGAAAAGTGTAATTTGATT+TGG | 0.281222 | 2_3:+56693744 | None:intergenic |
CCCGAAGCTGCTGTTCTATT+TGG | 0.284131 | 2_3:+56693414 | None:intergenic |
GAACAGCAGCTTCGGGATAC+TGG | 0.314644 | 2_3:-56693407 | Msa0301010:CDS |
GATCGAAAGTTCACGTTTGT+AGG | 0.317656 | 2_3:+56692976 | None:intergenic |
ACCAAATAGAACAGCAGCTT+CGG | 0.326451 | 2_3:-56693415 | Msa0301010:CDS |
TTATGTCGGGTTCGAAATAA+AGG | 0.361202 | 2_3:-56693084 | Msa0301010:CDS |
TTATTCCATTCGGATACTTT+CGG | 0.364663 | 2_3:+56693439 | None:intergenic |
CCTTGGTAGGTTTAATGGTA+TGG | 0.374086 | 2_3:+56693011 | None:intergenic |
TAGATGGAGGGACAACAAAA+TGG | 0.376134 | 2_3:-56693769 | Msa0301010:CDS |
CTAACTTCAGTTTATGAAGA+AGG | 0.386642 | 2_3:-56692826 | Msa0301010:CDS |
CTTTGTTTGGTGAGGAAGAA+TGG | 0.399941 | 2_3:-56693482 | Msa0301010:CDS |
TCGGGATACTGGAAGGCATC+TGG | 0.402275 | 2_3:-56693396 | Msa0301010:CDS |
CTATTTGGTCTTATTCCATT+CGG | 0.402956 | 2_3:+56693429 | None:intergenic |
TTCGGATACTTTCGGTCTCT+CGG | 0.404947 | 2_3:+56693447 | None:intergenic |
AGATTTGTCTAATTTGTTCT+CGG | 0.421589 | 2_3:+56692675 | None:intergenic |
GCTATAATCGACGCTGGAAG+TGG | 0.423391 | 2_3:+56693649 | None:intergenic |
TTATGAAGAAGGTTTCAATA+AGG | 0.425370 | 2_3:-56692815 | Msa0301010:CDS |
CCAAATAGAACAGCAGCTTC+GGG | 0.428897 | 2_3:-56693414 | Msa0301010:CDS |
TTATTCAGGTAGACCTCCTA+AGG | 0.433041 | 2_3:-56693307 | Msa0301010:CDS |
GGTAGGTTTAATGGTATGGT+TGG | 0.465528 | 2_3:+56693015 | None:intergenic |
ATCATAGCCTCTATTCTAGT+TGG | 0.470052 | 2_3:-56692916 | Msa0301010:CDS |
AATGGTATGGTTGGTTCACT+AGG | 0.470257 | 2_3:+56693024 | None:intergenic |
CAATCTGTCTTAACTCCCTT+AGG | 0.472334 | 2_3:+56693291 | None:intergenic |
TTGAAGTAACATTCCAAAGA+AGG | 0.474571 | 2_3:+56692772 | None:intergenic |
CTAAGGGAGTTAAGACAGAT+TGG | 0.476497 | 2_3:-56693290 | Msa0301010:CDS |
GGATGACTGGGTATTATGTC+GGG | 0.477294 | 2_3:-56693097 | Msa0301010:CDS |
TTTGAGTTTGAATGATTTCG+TGG | 0.477326 | 2_3:+56693236 | None:intergenic |
TTGCTGATATCTTTATGTAA+AGG | 0.481819 | 2_3:+56692618 | None:intergenic |
TCATGTGCATCAAAGCATAT+AGG | 0.483990 | 2_3:-56693351 | Msa0301010:CDS |
CTCGACATGTTCTCAGTTGG+AGG | 0.484459 | 2_3:+56692880 | None:intergenic |
TGTGCAGAGAAGTCTTTGTT+TGG | 0.486062 | 2_3:-56693495 | Msa0301010:intron |
TGGATGACTGGGTATTATGT+CGG | 0.492959 | 2_3:-56693098 | Msa0301010:CDS |
GATCATGAATGAGTATAGAT+TGG | 0.501119 | 2_3:-56693268 | Msa0301010:CDS |
ATAGCCTCTATTCTAGTTGG+TGG | 0.501858 | 2_3:-56692913 | Msa0301010:CDS |
GTAGGACGTTCTTCACCCCT+TGG | 0.504800 | 2_3:+56692994 | None:intergenic |
ATCTCTATAAGTATAATCCA+TGG | 0.526250 | 2_3:-56693618 | Msa0301010:CDS |
AAACTCGACATGTTCTCAGT+TGG | 0.532407 | 2_3:+56692877 | None:intergenic |
AACTCCACCAACTAGAATAG+AGG | 0.537358 | 2_3:+56692909 | None:intergenic |
TGAAGTAACATTCCAAAGAA+GGG | 0.552108 | 2_3:+56692773 | None:intergenic |
TGAGTTCTTCATCAGAAGGA+TGG | 0.561435 | 2_3:+56693707 | None:intergenic |
TACTTGAAAACTTACCCGCA+TGG | 0.566843 | 2_3:+56693209 | None:intergenic |
ACGAAATCATTCAAACTCAA+AGG | 0.572394 | 2_3:-56693234 | Msa0301010:CDS |
GCATAAAATTCTTAGATGGA+GGG | 0.583191 | 2_3:-56693781 | None:intergenic |
GACGTTCTTCACCCCTTGGT+AGG | 0.587479 | 2_3:+56692998 | None:intergenic |
AGAGAAGTCTTTGTTTGGTG+AGG | 0.597719 | 2_3:-56693490 | Msa0301010:CDS |
ATTTCAGCTATAATCGACGC+TGG | 0.604840 | 2_3:+56693643 | None:intergenic |
AGCAGCTTCGGGATACTGGA+AGG | 0.607218 | 2_3:-56693403 | Msa0301010:CDS |
TCTGTCTTAACTCCCTTAGG+AGG | 0.608939 | 2_3:+56693294 | None:intergenic |
ACTATGAGTTCTTCATCAGA+AGG | 0.609045 | 2_3:+56693703 | None:intergenic |
TCTCTATAAGTATAATCCAT+GGG | 0.620806 | 2_3:-56693617 | Msa0301010:CDS |
CCATACCATTAAACCTACCA+AGG | 0.620878 | 2_3:-56693011 | Msa0301010:CDS |
AGAGACCGAAAGTATCCGAA+TGG | 0.624198 | 2_3:-56693444 | Msa0301010:CDS |
CAAACTCAAAGGTTCCATGC+GGG | 0.628355 | 2_3:-56693223 | Msa0301010:intron |
TATTCAGGTAGACCTCCTAA+GGG | 0.630503 | 2_3:-56693306 | Msa0301010:CDS |
GACATGTTCTCAGTTGGAGG+AGG | 0.631484 | 2_3:+56692883 | None:intergenic |
AACATACTAGGTAACTCCCA+TGG | 0.643583 | 2_3:+56693601 | None:intergenic |
CATACCATTAAACCTACCAA+GGG | 0.657723 | 2_3:-56693010 | Msa0301010:CDS |
GAAGGATGGAATCTGAAACC+AGG | 0.664271 | 2_3:+56693721 | None:intergenic |
GGATGGAATCTGAAACCAGG+TGG | 0.688994 | 2_3:+56693724 | None:intergenic |
TCAAACTCAAAGGTTCCATG+CGG | 0.709010 | 2_3:-56693224 | Msa0301010:CDS |
ATACCATTAAACCTACCAAG+GGG | 0.762811 | 2_3:-56693009 | Msa0301010:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TCATTATGATAAACAAGATT+TGG | + | chr2_3:56692857-56692876 | None:intergenic | 20.0% |
!!! | TCATTAGATTTTCTTTTTAG+TGG | + | chr2_3:56693651-56693670 | None:intergenic | 20.0% |
!! | ACTAAAAAGAAAATCTAATG+AGG | - | chr2_3:56693650-56693669 | Msa0301010:CDS | 20.0% |
!! | TCATTATGATAAACAAGATT+TGG | + | chr2_3:56692857-56692876 | None:intergenic | 20.0% |
!!! | TCATTAGATTTTCTTTTTAG+TGG | + | chr2_3:56693651-56693670 | None:intergenic | 20.0% |
!! | ACTAAAAAGAAAATCTAATG+AGG | - | chr2_3:56693650-56693669 | Msa0301010:CDS | 20.0% |
!! | TGGAAAAGTGTAATTTGATT+TGG | + | chr2_3:56692655-56692674 | None:intergenic | 25.0% |
! | ATCTCTATAAGTATAATCCA+TGG | - | chr2_3:56692778-56692797 | Msa0301010:CDS | 25.0% |
! | TCTCTATAAGTATAATCCAT+GGG | - | chr2_3:56692779-56692798 | Msa0301010:CDS | 25.0% |
! | TTATGAAGAAGGTTTCAATA+AGG | - | chr2_3:56693581-56693600 | Msa0301010:intron | 25.0% |
!!! | AGATTTGTCTAATTTGTTCT+CGG | + | chr2_3:56693724-56693743 | None:intergenic | 25.0% |
!! | TGGAAAAGTGTAATTTGATT+TGG | + | chr2_3:56692655-56692674 | None:intergenic | 25.0% |
! | ATCTCTATAAGTATAATCCA+TGG | - | chr2_3:56692778-56692797 | Msa0301010:CDS | 25.0% |
! | TCTCTATAAGTATAATCCAT+GGG | - | chr2_3:56692779-56692798 | Msa0301010:CDS | 25.0% |
! | TTATGAAGAAGGTTTCAATA+AGG | - | chr2_3:56693581-56693600 | Msa0301010:intron | 25.0% |
!!! | AGATTTGTCTAATTTGTTCT+CGG | + | chr2_3:56693724-56693743 | None:intergenic | 25.0% |
TAAGAAGTCAAGAACATACT+AGG | + | chr2_3:56692810-56692829 | None:intergenic | 30.0% | |
TTATTCCATTCGGATACTTT+CGG | + | chr2_3:56692960-56692979 | None:intergenic | 30.0% | |
!! | CTATTTGGTCTTATTCCATT+CGG | + | chr2_3:56692970-56692989 | None:intergenic | 30.0% |
GATGCACATGAAGAAATTAT+TGG | + | chr2_3:56693036-56693055 | None:intergenic | 30.0% | |
!! | AAAGCTCTTGTGTTTTATTC+AGG | - | chr2_3:56693075-56693094 | Msa0301010:CDS | 30.0% |
GATCATGAATGAGTATAGAT+TGG | - | chr2_3:56693128-56693147 | Msa0301010:intron | 30.0% | |
! | TTTGAGTTTGAATGATTTCG+TGG | + | chr2_3:56693163-56693182 | None:intergenic | 30.0% |
ACGAAATCATTCAAACTCAA+AGG | - | chr2_3:56693162-56693181 | Msa0301010:intron | 30.0% | |
GTTCAAGCACTATGAATAAA+GGG | + | chr2_3:56693242-56693261 | None:intergenic | 30.0% | |
AGTTCAAGCACTATGAATAA+AGG | + | chr2_3:56693243-56693262 | None:intergenic | 30.0% | |
CTAACTTCAGTTTATGAAGA+AGG | - | chr2_3:56693570-56693589 | Msa0301010:intron | 30.0% | |
TGAAGTAACATTCCAAAGAA+GGG | + | chr2_3:56693626-56693645 | None:intergenic | 30.0% | |
TTGAAGTAACATTCCAAAGA+AGG | + | chr2_3:56693627-56693646 | None:intergenic | 30.0% | |
TAAGAAGTCAAGAACATACT+AGG | + | chr2_3:56692810-56692829 | None:intergenic | 30.0% | |
TTATTCCATTCGGATACTTT+CGG | + | chr2_3:56692960-56692979 | None:intergenic | 30.0% | |
!! | CTATTTGGTCTTATTCCATT+CGG | + | chr2_3:56692970-56692989 | None:intergenic | 30.0% |
GATGCACATGAAGAAATTAT+TGG | + | chr2_3:56693036-56693055 | None:intergenic | 30.0% | |
!! | AAAGCTCTTGTGTTTTATTC+AGG | - | chr2_3:56693075-56693094 | Msa0301010:CDS | 30.0% |
GATCATGAATGAGTATAGAT+TGG | - | chr2_3:56693128-56693147 | Msa0301010:intron | 30.0% | |
! | TTTGAGTTTGAATGATTTCG+TGG | + | chr2_3:56693163-56693182 | None:intergenic | 30.0% |
ACGAAATCATTCAAACTCAA+AGG | - | chr2_3:56693162-56693181 | Msa0301010:intron | 30.0% | |
GTTCAAGCACTATGAATAAA+GGG | + | chr2_3:56693242-56693261 | None:intergenic | 30.0% | |
AGTTCAAGCACTATGAATAA+AGG | + | chr2_3:56693243-56693262 | None:intergenic | 30.0% | |
CTAACTTCAGTTTATGAAGA+AGG | - | chr2_3:56693570-56693589 | Msa0301010:intron | 30.0% | |
TGAAGTAACATTCCAAAGAA+GGG | + | chr2_3:56693626-56693645 | None:intergenic | 30.0% | |
TTGAAGTAACATTCCAAAGA+AGG | + | chr2_3:56693627-56693646 | None:intergenic | 30.0% | |
! | TCAAATTACACTTTTCCACC+TGG | - | chr2_3:56692657-56692676 | Msa0301010:CDS | 35.0% |
ACTATGAGTTCTTCATCAGA+AGG | + | chr2_3:56692696-56692715 | None:intergenic | 35.0% | |
TCATGTGCATCAAAGCATAT+AGG | - | chr2_3:56693045-56693064 | Msa0301010:CDS | 35.0% | |
!! | CATTTCTCTGCTTTTACAGT+TGG | - | chr2_3:56693278-56693297 | Msa0301010:CDS | 35.0% |
TTATGTCGGGTTCGAAATAA+AGG | - | chr2_3:56693312-56693331 | Msa0301010:CDS | 35.0% | |
CATACCATTAAACCTACCAA+GGG | - | chr2_3:56693386-56693405 | Msa0301010:CDS | 35.0% | |
ATACCATTAAACCTACCAAG+GGG | - | chr2_3:56693387-56693406 | Msa0301010:CDS | 35.0% | |
ATCATAGCCTCTATTCTAGT+TGG | - | chr2_3:56693480-56693499 | Msa0301010:CDS | 35.0% | |
TCAAACTGTAATCCCTTCTT+TGG | - | chr2_3:56693611-56693630 | Msa0301010:CDS | 35.0% | |
!! | AGCTTTTGAAAATCGATGCT+AGG | + | chr2_3:56693747-56693766 | None:intergenic | 35.0% |
! | TCAAATTACACTTTTCCACC+TGG | - | chr2_3:56692657-56692676 | Msa0301010:CDS | 35.0% |
ACTATGAGTTCTTCATCAGA+AGG | + | chr2_3:56692696-56692715 | None:intergenic | 35.0% | |
TCATGTGCATCAAAGCATAT+AGG | - | chr2_3:56693045-56693064 | Msa0301010:CDS | 35.0% | |
!! | CATTTCTCTGCTTTTACAGT+TGG | - | chr2_3:56693278-56693297 | Msa0301010:CDS | 35.0% |
TTATGTCGGGTTCGAAATAA+AGG | - | chr2_3:56693312-56693331 | Msa0301010:CDS | 35.0% | |
CATACCATTAAACCTACCAA+GGG | - | chr2_3:56693386-56693405 | Msa0301010:CDS | 35.0% | |
ATACCATTAAACCTACCAAG+GGG | - | chr2_3:56693387-56693406 | Msa0301010:CDS | 35.0% | |
ATCATAGCCTCTATTCTAGT+TGG | - | chr2_3:56693480-56693499 | Msa0301010:CDS | 35.0% | |
TCAAACTGTAATCCCTTCTT+TGG | - | chr2_3:56693611-56693630 | Msa0301010:CDS | 35.0% | |
!! | AGCTTTTGAAAATCGATGCT+AGG | + | chr2_3:56693747-56693766 | None:intergenic | 35.0% |
TGAGTTCTTCATCAGAAGGA+TGG | + | chr2_3:56692692-56692711 | None:intergenic | 40.0% | |
ATTTCAGCTATAATCGACGC+TGG | + | chr2_3:56692756-56692775 | None:intergenic | 40.0% | |
AACATACTAGGTAACTCCCA+TGG | + | chr2_3:56692798-56692817 | None:intergenic | 40.0% | |
TGTGCAGAGAAGTCTTTGTT+TGG | - | chr2_3:56692901-56692920 | Msa0301010:CDS | 40.0% | |
! | AGAGAAGTCTTTGTTTGGTG+AGG | - | chr2_3:56692906-56692925 | Msa0301010:CDS | 40.0% |
! | CTTTGTTTGGTGAGGAAGAA+TGG | - | chr2_3:56692914-56692933 | Msa0301010:CDS | 40.0% |
ACCAAATAGAACAGCAGCTT+CGG | - | chr2_3:56692981-56693000 | Msa0301010:CDS | 40.0% | |
TTATTCAGGTAGACCTCCTA+AGG | - | chr2_3:56693089-56693108 | Msa0301010:CDS | 40.0% | |
TATTCAGGTAGACCTCCTAA+GGG | - | chr2_3:56693090-56693109 | Msa0301010:CDS | 40.0% | |
CAATCTGTCTTAACTCCCTT+AGG | + | chr2_3:56693108-56693127 | None:intergenic | 40.0% | |
CTAAGGGAGTTAAGACAGAT+TGG | - | chr2_3:56693106-56693125 | Msa0301010:intron | 40.0% | |
TCAAACTCAAAGGTTCCATG+CGG | - | chr2_3:56693172-56693191 | Msa0301010:intron | 40.0% | |
TACTTGAAAACTTACCCGCA+TGG | + | chr2_3:56693190-56693209 | None:intergenic | 40.0% | |
! | TGCTTTTACAGTTGGATGAC+TGG | - | chr2_3:56693286-56693305 | Msa0301010:CDS | 40.0% |
! | GCTTTTACAGTTGGATGACT+GGG | - | chr2_3:56693287-56693306 | Msa0301010:CDS | 40.0% |
TGGATGACTGGGTATTATGT+CGG | - | chr2_3:56693298-56693317 | Msa0301010:CDS | 40.0% | |
! | AATGGTATGGTTGGTTCACT+AGG | + | chr2_3:56693375-56693394 | None:intergenic | 40.0% |
GGTAGGTTTAATGGTATGGT+TGG | + | chr2_3:56693384-56693403 | None:intergenic | 40.0% | |
CCTTGGTAGGTTTAATGGTA+TGG | + | chr2_3:56693388-56693407 | None:intergenic | 40.0% | |
CCATACCATTAAACCTACCA+AGG | - | chr2_3:56693385-56693404 | Msa0301010:CDS | 40.0% | |
GATCGAAAGTTCACGTTTGT+AGG | + | chr2_3:56693423-56693442 | None:intergenic | 40.0% | |
! | ATAGCCTCTATTCTAGTTGG+TGG | - | chr2_3:56693483-56693502 | Msa0301010:CDS | 40.0% |
AACTCCACCAACTAGAATAG+AGG | + | chr2_3:56693490-56693509 | None:intergenic | 40.0% | |
AAACTCGACATGTTCTCAGT+TGG | + | chr2_3:56693522-56693541 | None:intergenic | 40.0% | |
ATGTCGAGTTTGAGCGTTAA+TGG | - | chr2_3:56693531-56693550 | Msa0301010:intron | 40.0% | |
TGAGTTCTTCATCAGAAGGA+TGG | + | chr2_3:56692692-56692711 | None:intergenic | 40.0% | |
ATTTCAGCTATAATCGACGC+TGG | + | chr2_3:56692756-56692775 | None:intergenic | 40.0% | |
AACATACTAGGTAACTCCCA+TGG | + | chr2_3:56692798-56692817 | None:intergenic | 40.0% | |
TGTGCAGAGAAGTCTTTGTT+TGG | - | chr2_3:56692901-56692920 | Msa0301010:CDS | 40.0% | |
! | AGAGAAGTCTTTGTTTGGTG+AGG | - | chr2_3:56692906-56692925 | Msa0301010:CDS | 40.0% |
! | CTTTGTTTGGTGAGGAAGAA+TGG | - | chr2_3:56692914-56692933 | Msa0301010:CDS | 40.0% |
ACCAAATAGAACAGCAGCTT+CGG | - | chr2_3:56692981-56693000 | Msa0301010:CDS | 40.0% | |
TTATTCAGGTAGACCTCCTA+AGG | - | chr2_3:56693089-56693108 | Msa0301010:CDS | 40.0% | |
TATTCAGGTAGACCTCCTAA+GGG | - | chr2_3:56693090-56693109 | Msa0301010:CDS | 40.0% | |
CAATCTGTCTTAACTCCCTT+AGG | + | chr2_3:56693108-56693127 | None:intergenic | 40.0% | |
CTAAGGGAGTTAAGACAGAT+TGG | - | chr2_3:56693106-56693125 | Msa0301010:intron | 40.0% | |
TCAAACTCAAAGGTTCCATG+CGG | - | chr2_3:56693172-56693191 | Msa0301010:intron | 40.0% | |
TACTTGAAAACTTACCCGCA+TGG | + | chr2_3:56693190-56693209 | None:intergenic | 40.0% | |
! | TGCTTTTACAGTTGGATGAC+TGG | - | chr2_3:56693286-56693305 | Msa0301010:CDS | 40.0% |
! | GCTTTTACAGTTGGATGACT+GGG | - | chr2_3:56693287-56693306 | Msa0301010:CDS | 40.0% |
TGGATGACTGGGTATTATGT+CGG | - | chr2_3:56693298-56693317 | Msa0301010:CDS | 40.0% | |
! | AATGGTATGGTTGGTTCACT+AGG | + | chr2_3:56693375-56693394 | None:intergenic | 40.0% |
GGTAGGTTTAATGGTATGGT+TGG | + | chr2_3:56693384-56693403 | None:intergenic | 40.0% | |
CCTTGGTAGGTTTAATGGTA+TGG | + | chr2_3:56693388-56693407 | None:intergenic | 40.0% | |
CCATACCATTAAACCTACCA+AGG | - | chr2_3:56693385-56693404 | Msa0301010:CDS | 40.0% | |
GATCGAAAGTTCACGTTTGT+AGG | + | chr2_3:56693423-56693442 | None:intergenic | 40.0% | |
! | ATAGCCTCTATTCTAGTTGG+TGG | - | chr2_3:56693483-56693502 | Msa0301010:CDS | 40.0% |
AACTCCACCAACTAGAATAG+AGG | + | chr2_3:56693490-56693509 | None:intergenic | 40.0% | |
AAACTCGACATGTTCTCAGT+TGG | + | chr2_3:56693522-56693541 | None:intergenic | 40.0% | |
ATGTCGAGTTTGAGCGTTAA+TGG | - | chr2_3:56693531-56693550 | Msa0301010:intron | 40.0% | |
! | GAAGGATGGAATCTGAAACC+AGG | + | chr2_3:56692678-56692697 | None:intergenic | 45.0% |
TTCGGATACTTTCGGTCTCT+CGG | + | chr2_3:56692952-56692971 | None:intergenic | 45.0% | |
!! | AGAGACCGAAAGTATCCGAA+TGG | - | chr2_3:56692952-56692971 | Msa0301010:CDS | 45.0% |
CCAAATAGAACAGCAGCTTC+GGG | - | chr2_3:56692982-56693001 | Msa0301010:CDS | 45.0% | |
TCTGTCTTAACTCCCTTAGG+AGG | + | chr2_3:56693105-56693124 | None:intergenic | 45.0% | |
CAAACTCAAAGGTTCCATGC+GGG | - | chr2_3:56693173-56693192 | Msa0301010:intron | 45.0% | |
GGATGACTGGGTATTATGTC+GGG | - | chr2_3:56693299-56693318 | Msa0301010:CDS | 45.0% | |
TCACCCCTTGGTAGGTTTAA+TGG | + | chr2_3:56693393-56693412 | None:intergenic | 45.0% | |
! | GAAGGATGGAATCTGAAACC+AGG | + | chr2_3:56692678-56692697 | None:intergenic | 45.0% |
TTCGGATACTTTCGGTCTCT+CGG | + | chr2_3:56692952-56692971 | None:intergenic | 45.0% | |
!! | AGAGACCGAAAGTATCCGAA+TGG | - | chr2_3:56692952-56692971 | Msa0301010:CDS | 45.0% |
CCAAATAGAACAGCAGCTTC+GGG | - | chr2_3:56692982-56693001 | Msa0301010:CDS | 45.0% | |
TCTGTCTTAACTCCCTTAGG+AGG | + | chr2_3:56693105-56693124 | None:intergenic | 45.0% | |
CAAACTCAAAGGTTCCATGC+GGG | - | chr2_3:56693173-56693192 | Msa0301010:intron | 45.0% | |
GGATGACTGGGTATTATGTC+GGG | - | chr2_3:56693299-56693318 | Msa0301010:CDS | 45.0% | |
TCACCCCTTGGTAGGTTTAA+TGG | + | chr2_3:56693393-56693412 | None:intergenic | 45.0% | |
! | GGATGGAATCTGAAACCAGG+TGG | + | chr2_3:56692675-56692694 | None:intergenic | 50.0% |
GCTATAATCGACGCTGGAAG+TGG | + | chr2_3:56692750-56692769 | None:intergenic | 50.0% | |
CCCGAAGCTGCTGTTCTATT+TGG | + | chr2_3:56692985-56693004 | None:intergenic | 50.0% | |
GACATGTTCTCAGTTGGAGG+AGG | + | chr2_3:56693516-56693535 | None:intergenic | 50.0% | |
CTCGACATGTTCTCAGTTGG+AGG | + | chr2_3:56693519-56693538 | None:intergenic | 50.0% | |
! | GGATGGAATCTGAAACCAGG+TGG | + | chr2_3:56692675-56692694 | None:intergenic | 50.0% |
GCTATAATCGACGCTGGAAG+TGG | + | chr2_3:56692750-56692769 | None:intergenic | 50.0% | |
CCCGAAGCTGCTGTTCTATT+TGG | + | chr2_3:56692985-56693004 | None:intergenic | 50.0% | |
GACATGTTCTCAGTTGGAGG+AGG | + | chr2_3:56693516-56693535 | None:intergenic | 50.0% | |
CTCGACATGTTCTCAGTTGG+AGG | + | chr2_3:56693519-56693538 | None:intergenic | 50.0% | |
GAACAGCAGCTTCGGGATAC+TGG | - | chr2_3:56692989-56693008 | Msa0301010:CDS | 55.0% | |
AGCAGCTTCGGGATACTGGA+AGG | - | chr2_3:56692993-56693012 | Msa0301010:CDS | 55.0% | |
!! | TCGGGATACTGGAAGGCATC+TGG | - | chr2_3:56693000-56693019 | Msa0301010:CDS | 55.0% |
GACGTTCTTCACCCCTTGGT+AGG | + | chr2_3:56693401-56693420 | None:intergenic | 55.0% | |
GTAGGACGTTCTTCACCCCT+TGG | + | chr2_3:56693405-56693424 | None:intergenic | 55.0% | |
GAACAGCAGCTTCGGGATAC+TGG | - | chr2_3:56692989-56693008 | Msa0301010:CDS | 55.0% | |
AGCAGCTTCGGGATACTGGA+AGG | - | chr2_3:56692993-56693012 | Msa0301010:CDS | 55.0% | |
!! | TCGGGATACTGGAAGGCATC+TGG | - | chr2_3:56693000-56693019 | Msa0301010:CDS | 55.0% |
GACGTTCTTCACCCCTTGGT+AGG | + | chr2_3:56693401-56693420 | None:intergenic | 55.0% | |
GTAGGACGTTCTTCACCCCT+TGG | + | chr2_3:56693405-56693424 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_3 | gene | 56692630 | 56693788 | 56692630 | ID=Msa0301010;Name=Msa0301010 |
chr2_3 | mRNA | 56692630 | 56693788 | 56692630 | ID=Msa0301010-mRNA-1;Parent=Msa0301010;Name=Msa0301010-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|3|0|319 |
chr2_3 | exon | 56693608 | 56693788 | 56693608 | ID=Msa0301010-mRNA-1:exon:18276;Parent=Msa0301010-mRNA-1 |
chr2_3 | exon | 56693224 | 56693510 | 56693224 | ID=Msa0301010-mRNA-1:exon:18275;Parent=Msa0301010-mRNA-1 |
chr2_3 | exon | 56692630 | 56693121 | 56692630 | ID=Msa0301010-mRNA-1:exon:18274;Parent=Msa0301010-mRNA-1 |
chr2_3 | CDS | 56693608 | 56693788 | 56693608 | ID=Msa0301010-mRNA-1:cds;Parent=Msa0301010-mRNA-1 |
chr2_3 | CDS | 56693224 | 56693510 | 56693224 | ID=Msa0301010-mRNA-1:cds;Parent=Msa0301010-mRNA-1 |
chr2_3 | CDS | 56692630 | 56693121 | 56692630 | ID=Msa0301010-mRNA-1:cds;Parent=Msa0301010-mRNA-1 |
Gene Sequence |
Protein sequence |