AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0301350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0301350 MtrunA17_Chr2g0326731 97.616 839 14 1 1 833 1 839 0.0 1703
Msa0301350 MtrunA17_Chr4g0028991 79.103 847 160 8 1 833 3 846 0.0 1378
Msa0301350 MtrunA17_Chr2g0292391 63.571 840 280 10 13 833 4 836 0.0 1090
Msa0301350 MtrunA17_Chr2g0331131 61.796 835 287 11 21 833 12 836 0.0 1042
Msa0301350 MtrunA17_Chr3g0140351 61.602 849 293 13 3 833 2 835 0.0 1039
Msa0301350 MtrunA17_Chr8g0340411 59.595 839 304 12 16 833 8 832 0.0 1028
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0301350 AT5G60690.1 75.118 848 188 8 1 833 3 842 0.0 1315
Msa0301350 AT2G34710.1 62.791 860 282 13 3 833 2 852 0.0 1070
Msa0301350 AT1G30490.1 62.395 835 280 11 21 833 19 841 0.0 1048
Msa0301350 AT1G52150.1 61.071 840 282 15 21 833 15 836 0.0 1029
Msa0301350 AT1G52150.2 60.952 840 284 15 21 833 15 837 0.0 1027
Msa0301350 AT4G32880.1 59.547 838 305 14 17 833 9 833 0.0 1003
Msa0301350 AT1G52150.3 61.499 787 268 15 21 785 15 788 0.0 959
Msa0301350 AT5G32670.1 64.286 70 25 0 289 358 37 106 2.67e-25 104
Msa0301350 AT5G52170.2 25.203 369 218 11 24 355 61 408 2.59e-15 80.9
Msa0301350 AT5G52170.3 25.203 369 218 11 24 355 61 408 2.90e-15 80.5
Msa0301350 AT5G52170.1 25.203 369 218 11 24 355 61 408 2.90e-15 80.5
Msa0301350 AT4G04890.2 41.176 85 43 2 23 104 65 145 3.75e-11 67.4
Msa0301350 AT4G04890.1 41.176 85 43 2 23 104 65 145 3.75e-11 67.4

Find 254 sgRNAs with CRISPR-Local

Find 394 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTATAAACACAAACCTTATT+TGG 0.057726 2_3:+57323765 Msa0301350:five_prime_UTR
CTGAGATCTGATTCTCTTAT+TGG 0.129142 2_3:+57327630 Msa0301350:CDS
GAAGAAGTACTTAAGTTAAA+AGG 0.178801 2_3:+57323355 Msa0301350:five_prime_UTR
TGGCTTTCTCGTTCATTAAT+TGG 0.181977 2_3:+57328209 Msa0301350:CDS
GTCTGAAAGCAGTCATTATC+TGG 0.224488 2_3:+57327596 Msa0301350:intron
TAGGGATGTTCATCTCTTAC+AGG 0.241280 2_3:+57326832 Msa0301350:CDS
TTTACAAGATCAAATCATTT+TGG 0.241363 2_3:-57328425 None:intergenic
TCTAAGATACACTACAAATT+TGG 0.241855 2_3:+57325414 Msa0301350:CDS
GGCACCAAGGGAGCATCTTC+TGG 0.244403 2_3:-57327029 None:intergenic
TGGCTTCTGCTCGCGACTTC+TGG 0.249772 2_3:+57325389 Msa0301350:CDS
TGAGCTAGTGTAAGTGCTTC+TGG 0.266525 2_3:-57327471 None:intergenic
AAGTACTTCTTCTTCCTCTA+TGG 0.275363 2_3:-57323344 None:intergenic
GATGCTCCCTTGGTGCCTTC+TGG 0.276911 2_3:+57327035 Msa0301350:CDS
CACTCTTAAGACCCCAAATA+AGG 0.277810 2_3:-57323778 None:intergenic
TATAAACACAAACCTTATTT+GGG 0.278015 2_3:+57323766 Msa0301350:five_prime_UTR
TAGAGCGGCCGCAGCACTTC+TGG 0.282965 2_3:-57325802 None:intergenic
GATTCGGGAGTGCCCGGTTT+TGG 0.283665 2_3:+57324057 Msa0301350:CDS
TGCAGGCACTTCGCTATATC+AGG 0.289145 2_3:+57325947 Msa0301350:intron
GTTTCACTAGTTGGAACTAT+TGG 0.292623 2_3:+57323644 Msa0301350:five_prime_UTR
CTGTCAGCATTTGGAGCTGC+TGG 0.306678 2_3:-57324570 None:intergenic
TTGTGTTGTATTGCCTCTTT+TGG 0.331442 2_3:+57323823 Msa0301350:five_prime_UTR
GGCTCAATGTTGGCCAAAAC+CGG 0.331817 2_3:-57324070 None:intergenic
GTCGATTGGGTCCAGATGCC+TGG 0.336793 2_3:+57324811 Msa0301350:CDS
TGAGAAGGCAACAGCTGATT+CGG 0.337430 2_3:+57324041 Msa0301350:CDS
GAACTCAAACCTGCAGGTTT+AGG 0.340860 2_3:-57325686 None:intergenic
TGCTGAACAGATTGAAGCTT+TGG 0.342547 2_3:+57323982 Msa0301350:CDS
GAAAGGTCACTGTCTGGTTC+TGG 0.344827 2_3:+57325549 Msa0301350:CDS
CGTTAGCATGAGCTGTTGCC+TGG 0.351416 2_3:-57327248 None:intergenic
GGCTTACAGTGTGCAATTGC+TGG 0.352045 2_3:-57324387 None:intergenic
CGAGCAGAAGCCAGCGTCAT+TGG 0.354964 2_3:-57325379 None:intergenic
CCATCCAGCGTTAACACTTC+TGG 0.355722 2_3:+57327423 Msa0301350:CDS
GCACATTACAAGATCATGTT+TGG 0.359217 2_3:+57328361 Msa0301350:three_prime_UTR
CTACCTTCATCCCAGGCATC+TGG 0.361257 2_3:-57324822 None:intergenic
TCAAGGTTTGGTTTCAGAAT+AGG 0.367043 2_3:+57324101 Msa0301350:CDS
GGATTTCATGTTTCACTAGT+TGG 0.370698 2_3:+57323635 Msa0301350:five_prime_UTR
GGGTTTGCTTGTATGCCAGC+TGG 0.372830 2_3:+57328097 Msa0301350:CDS
GCAAATATCCCAACCGAATC+CGG 0.374500 2_3:-57324981 None:intergenic
CTAGAAATTATCCGCCTTGA+AGG 0.374957 2_3:+57326782 Msa0301350:CDS
TGTGAGGCGGCTGCAGCATT+AGG 0.376059 2_3:-57325579 None:intergenic
CGAACCTTGGATTTGACATC+TGG 0.378202 2_3:+57327213 Msa0301350:CDS
GACCGCTCTCAAAAGGAAAC+TGG 0.380637 2_3:-57327317 None:intergenic
TCACTGTCTGGTTCTGGTGC+TGG 0.384059 2_3:+57325555 Msa0301350:CDS
CTTCTCAATGAACTAGGCTT+AGG 0.391335 2_3:-57324025 None:intergenic
TGCGATGAATAAGCTGTTGA+TGG 0.394036 2_3:+57324303 Msa0301350:CDS
TCACTTAAAGCTGGCTCCTA+TGG 0.403810 2_3:+57326543 Msa0301350:CDS
TTGTTAGCCTGGTCCGGATT+CGG 0.407612 2_3:+57324968 Msa0301350:intron
ACAATGTTCCCAGCTGGAAA+TGG 0.408347 2_3:+57325242 Msa0301350:CDS
ATGTCTCCTCCGCAATTGAT+AGG 0.410911 2_3:-57324753 None:intergenic
TCATTTATATGACCTATTGC+AGG 0.413124 2_3:+57328232 Msa0301350:exon
CGCTGTGCAGGCGGTTGCAA+CGG 0.418938 2_3:+57327392 Msa0301350:intron
CATTGTTTGTTAGCCTGGTC+CGG 0.420545 2_3:+57324962 Msa0301350:intron
ACGCCACTACTGTCAGCATT+TGG 0.421308 2_3:-57324579 None:intergenic
TCCGTTGCCACCTTGAGAAA+TGG 0.423146 2_3:-57325003 None:intergenic
GCTGGCTCCTATGGCTATCC+TGG 0.426007 2_3:+57326552 Msa0301350:CDS
AATGGATCTGCCAGAGCTAT+AGG 0.426936 2_3:+57327493 Msa0301350:CDS
CTCAGCTTCAGAGTGTGAAC+AGG 0.430488 2_3:+57324272 Msa0301350:CDS
GCATCTCTCAATGAATTCAT+AGG 0.433129 2_3:-57324621 None:intergenic
TGTCAGCATTTGGAGCTGCT+GGG 0.436092 2_3:-57324569 None:intergenic
GAGAAGGCAACAGCTGATTC+GGG 0.436593 2_3:+57324042 Msa0301350:CDS
TCTGGGAACATGTCATCAAT+TGG 0.437275 2_3:-57327011 None:intergenic
TTCTTGAACAAGCTTAGCTT+AGG 0.438858 2_3:+57323224 Msa0301350:five_prime_UTR
TACAGGAACTGCTGTCGATT+GGG 0.439880 2_3:+57324798 Msa0301350:CDS
GTAAGTGCTTCTGGAGTGCC+AGG 0.441398 2_3:-57327462 None:intergenic
GTCAACGCACATCGATTGTT+AGG 0.445713 2_3:-57327285 None:intergenic
AGCCTAAGCAGATCAAGGTT+TGG 0.446562 2_3:+57324089 Msa0301350:CDS
CTAAAAGTTCTAAGAACTGC+AGG 0.446795 2_3:-57326021 None:intergenic
TCATTTGAACAGTTATGTAC+TGG 0.447517 2_3:+57326942 Msa0301350:intron
GGGATCTGCATGTCAACAAT+GGG 0.449516 2_3:+57328118 Msa0301350:CDS
AGACAACAGTGTTCATTGCT+TGG 0.451078 2_3:+57328189 Msa0301350:CDS
GAGCAGCATAAAATAGCATC+TGG 0.451862 2_3:-57327684 None:intergenic
AGGCATGATTGCTTGATTGC+CGG 0.454592 2_3:-57326595 None:intergenic
AGCTTTGGAAAAGGTTTATG+TGG 0.455518 2_3:+57323997 Msa0301350:CDS
AAATGAGAGGCTGCAGAAGC+AGG 0.455804 2_3:+57324330 Msa0301350:CDS
AGCCTGGTCCGGATTCGGTT+GGG 0.455928 2_3:+57324973 Msa0301350:intron
TTCTTCCTCTATGGAGCTTG+AGG 0.456568 2_3:-57323335 None:intergenic
TAGAATTTAATAAAATGAAG+TGG 0.456677 2_3:+57328461 Msa0301350:three_prime_UTR
GCACCAAGGGAGCATCTTCT+GGG 0.456872 2_3:-57327028 None:intergenic
GGTTTCAATGACGCTGTCAA+TGG 0.456971 2_3:+57326165 Msa0301350:CDS
GGGGATTTAAATCCTGCAAT+AGG 0.458859 2_3:-57328244 None:intergenic
TCCTGCAGACCGCTCTCAAA+AGG 0.460653 2_3:-57327324 None:intergenic
ACAGATTGAAGCTTTGGAAA+AGG 0.463288 2_3:+57323988 Msa0301350:CDS
CCATGGCACGTCAGTATGTC+CGG 0.463423 2_3:+57327358 Msa0301350:CDS
TCACAGCTGGTGAATGAGAA+TGG 0.465043 2_3:+57324355 Msa0301350:CDS
TGTTAGTTTAGAACCTACTA+AGG 0.469404 2_3:+57325049 Msa0301350:CDS
GCAAGTTCCCTTTCACTCCT+CGG 0.470542 2_3:+57326288 Msa0301350:CDS
TCTGCTGCATCACTTAAAGC+TGG 0.473121 2_3:+57326534 Msa0301350:CDS
TACACTACAAATTTGGAAAA+CGG 0.474537 2_3:+57325421 Msa0301350:CDS
AACCTCGTAGACCTCATTCC+AGG 0.475028 2_3:-57326570 None:intergenic
TTTAAGTGATGCAGCAGAAA+AGG 0.475810 2_3:-57326529 None:intergenic
GAAACAGTGGGAATAAAGTC+AGG 0.476275 2_3:-57323129 None:intergenic
TTCATCTTTGCTAACCAGGC+TGG 0.476545 2_3:+57327833 Msa0301350:CDS
GGGATATTTGCCATTTCTCA+AGG 0.476954 2_3:+57324993 Msa0301350:CDS
CTGGTTAGCAAAGATGAATA+CGG 0.477103 2_3:-57327828 None:intergenic
ACAGCTGATTCGGGAGTGCC+CGG 0.479031 2_3:+57324051 Msa0301350:CDS
GGTCCAGATGCCTGGGATGA+AGG 0.479652 2_3:+57324819 Msa0301350:CDS
GAGGGAGCATCGCTCGGAGT+GGG 0.480911 2_3:+57326488 Msa0301350:CDS
GCTCTATGAATCGTCGCAAA+TGG 0.481115 2_3:+57325819 Msa0301350:CDS
CATCTTGAGCAAGACCTTCA+AGG 0.481464 2_3:-57326796 None:intergenic
CATATTTGCCAGACGAATCA+AGG 0.481482 2_3:-57323949 None:intergenic
ATTTGAGATTAGGAAGAAGA+TGG 0.482110 2_3:+57323880 Msa0301350:exon
CCCTAAAATAAAACCAAAAG+AGG 0.482490 2_3:-57323836 None:intergenic
AGGAGTGAAAGGGAACTTGC+TGG 0.482905 2_3:-57326285 None:intergenic
CAACTGGTTGAGAATTCAAC+AGG 0.483215 2_3:-57327070 None:intergenic
GTTTGTGAAAGGTCACTGTC+TGG 0.483493 2_3:+57325543 Msa0301350:CDS
CGTATTCATCTTTGCTAACC+AGG 0.483530 2_3:+57327829 Msa0301350:CDS
AAGAAGTACTTAAGTTAAAA+GGG 0.484220 2_3:+57323356 Msa0301350:five_prime_UTR
TTCTCAATGAACTAGGCTTA+GGG 0.486895 2_3:-57324024 None:intergenic
TGTTGCCTTCTCAATGAACT+AGG 0.487411 2_3:-57324031 None:intergenic
ATTGTTCCTCCATTTCCAGC+TGG 0.487699 2_3:-57325251 None:intergenic
TTGTTCCTCCATTTCCAGCT+GGG 0.490051 2_3:-57325250 None:intergenic
CTTTCTGAGGGAGCATCGCT+CGG 0.490804 2_3:+57326482 Msa0301350:CDS
CAATTCCTCCGAGGAGTGAA+AGG 0.491585 2_3:-57326296 None:intergenic
GACAATCACGATACCAAGTT+GGG 0.492005 2_3:-57325202 None:intergenic
AGAATTTAATAAAATGAAGT+GGG 0.492246 2_3:+57328462 Msa0301350:three_prime_UTR
GGTTTGCTTGTATGCCAGCT+GGG 0.493869 2_3:+57328098 Msa0301350:CDS
GAGTTCCTTTCAAAGGCTAC+AGG 0.495421 2_3:+57324781 Msa0301350:CDS
AACAACTCTAGTGGCTCTAC+AGG 0.497254 2_3:+57327871 Msa0301350:CDS
AGAGATGCTAATAGCCCTGC+TGG 0.498973 2_3:+57324636 Msa0301350:CDS
TAGCCTGGTCCGGATTCGGT+TGG 0.499456 2_3:+57324972 Msa0301350:intron
CATTGAGCCTAAGCAGATCA+AGG 0.500320 2_3:+57324084 Msa0301350:CDS
CTACAGGAACTGCTGTCGAT+TGG 0.500801 2_3:+57324797 Msa0301350:CDS
GAGAGACACCTTGATTCGTC+TGG 0.501967 2_3:+57323941 Msa0301350:CDS
ATCTGGTCTTGAAGTAAGCC+AGG 0.503745 2_3:+57327230 Msa0301350:CDS
ATCCCAACCGAATCCGGACC+AGG 0.504673 2_3:-57324975 None:intergenic
GAACTTCAAAATTACCCAGC+AGG 0.508005 2_3:-57324651 None:intergenic
GCCATTTCTCAAGGTGGCAA+CGG 0.511290 2_3:+57325002 Msa0301350:CDS
TGGTCTGTTCTGAACTGTGA+TGG 0.511447 2_3:+57326204 Msa0301350:CDS
TCCTAAAAGATCGCCCAACT+TGG 0.516859 2_3:+57325189 Msa0301350:CDS
CACTTTGGAAGGTTTGTGAA+AGG 0.517480 2_3:+57325532 Msa0301350:intron
CCAGAAGTGTTAACGCTGGA+TGG 0.519643 2_3:-57327423 None:intergenic
CAGCCGCCTCACAGTTTGCG+AGG 0.524698 2_3:+57325589 Msa0301350:CDS
GTTCCCAGAAGATGCTCCCT+TGG 0.524999 2_3:+57327025 Msa0301350:CDS
ATCAATTGCGGAGGAGACAT+TGG 0.525084 2_3:+57324756 Msa0301350:CDS
AGCCGCCTCACAGTTTGCGA+GGG 0.525840 2_3:+57325590 Msa0301350:CDS
GCAGGATAATGTTGCAGCCA+TGG 0.526267 2_3:+57327341 Msa0301350:CDS
TCTGAAAGCAGTCATTATCT+GGG 0.529270 2_3:+57327597 Msa0301350:intron
CGACAATCACGATACCAAGT+TGG 0.529574 2_3:-57325203 None:intergenic
CAACTTGGTATCGTGATTGT+CGG 0.529939 2_3:+57325204 Msa0301350:CDS
GCAGAAGCAGGTTTCACAGC+TGG 0.531459 2_3:+57324342 Msa0301350:CDS
AGGTTTGGTTTCAGAATAGG+AGG 0.531854 2_3:+57324104 Msa0301350:CDS
TCTTGAACAAGCTTAGCTTA+GGG 0.532616 2_3:+57323225 Msa0301350:five_prime_UTR
TTCTAAACTAACAAGACCAC+AGG 0.536240 2_3:-57325039 None:intergenic
AATCAAGCAATCATGCCTCT+TGG 0.536445 2_3:+57326600 Msa0301350:CDS
AAGCACTTACACTAGCTCAA+TGG 0.536805 2_3:+57327475 Msa0301350:CDS
ATTGGCAGAGTTCCTTTCAA+AGG 0.541184 2_3:+57324774 Msa0301350:CDS
TTCTTCCTCAAGCTCCATAG+AGG 0.541627 2_3:+57323330 Msa0301350:five_prime_UTR
CCAGGCTGGCCTTGACATGT+TGG 0.541782 2_3:+57327847 Msa0301350:CDS
ATGAGGTCTACGAGGTTCAC+CGG 0.543253 2_3:+57326576 Msa0301350:CDS
GTTGACATGCAGATCCCAGC+TGG 0.543937 2_3:-57328112 None:intergenic
GTCAATGGATTCAATGATGA+TGG 0.544773 2_3:+57326180 Msa0301350:CDS
GTCAGCATTTGGAGCTGCTG+GGG 0.546846 2_3:-57324568 None:intergenic
GGTGGAGCAAAACTCTCCCC+TGG 0.550796 2_3:+57327444 Msa0301350:CDS
CGGAAACCAGAAGGCACCAA+GGG 0.551319 2_3:-57327041 None:intergenic
CAGTTCCTGTAGCCTTTGAA+AGG 0.551448 2_3:-57324786 None:intergenic
CTCAAACCTGCAGGTTTAGG+TGG 0.551972 2_3:-57325683 None:intergenic
CCAACATGTCAAGGCCAGCC+TGG 0.554158 2_3:-57327847 None:intergenic
GCACACTTTACCTATAGCTC+TGG 0.555699 2_3:-57327503 None:intergenic
TGGGATCTGCATGTCAACAA+TGG 0.558119 2_3:+57328117 Msa0301350:CDS
TCGATTGGGTCCAGATGCCT+GGG 0.561065 2_3:+57324812 Msa0301350:CDS
AGAAAGCGAACTAAAACAGC+AGG 0.564715 2_3:-57326465 None:intergenic
TCTGAACTGTGATGGTGCCG+AGG 0.568521 2_3:+57326212 Msa0301350:CDS
TTGCAGATTCCTATCAATTG+CGG 0.571465 2_3:+57324744 Msa0301350:intron
AGTACTTAAGTTAAAAGGGT+CGG 0.571938 2_3:+57323360 Msa0301350:five_prime_UTR
CGACGTACCTGCTCAACCGT+TGG 0.573623 2_3:-57326044 None:intergenic
TCAAGAAACAAGTGGTGAAG+TGG 0.576595 2_3:+57325978 Msa0301350:CDS
GCTCAATGTTGGCCAAAACC+GGG 0.577313 2_3:-57324069 None:intergenic
TGAGGGAGCATCGCTCGGAG+TGG 0.578290 2_3:+57326487 Msa0301350:CDS
TGGTTAGCAAAGATGAATAC+GGG 0.580621 2_3:-57327827 None:intergenic
AATTCAATCAAGAATTTGAG+TGG 0.580677 2_3:+57326252 Msa0301350:CDS
AACAGCAGCAAATCGAACCT+TGG 0.582279 2_3:+57327200 Msa0301350:CDS
TGTAGACCACCTAAACCTGC+AGG 0.582635 2_3:+57325677 Msa0301350:CDS
CAGGCAACAGCTCATGCTAA+CGG 0.583410 2_3:+57327249 Msa0301350:CDS
AATTCCTCCGAGGAGTGAAA+GGG 0.584178 2_3:-57326295 None:intergenic
GATCTGCTTAGGCTCAATGT+TGG 0.585016 2_3:-57324080 None:intergenic
ATGGATTCAATGATGATGGC+TGG 0.585896 2_3:+57326184 Msa0301350:CDS
ATTCGACCATGTGAAGGTGG+AGG 0.587006 2_3:+57325639 Msa0301350:CDS
GGTCGAATCAAGTAACCACT+AGG 0.588209 2_3:-57325624 None:intergenic
AACTTCAAAATTACCCAGCA+GGG 0.589166 2_3:-57324650 None:intergenic
TAGGGAGAAGCAGAGAAAAG+AGG 0.589529 2_3:+57324246 Msa0301350:CDS
GAGTTGTTTCCAACATGTCA+AGG 0.591719 2_3:-57327856 None:intergenic
GTGATCTGAGCTGAAACAGT+GGG 0.593949 2_3:-57323141 None:intergenic
AGTGATCTGAGCTGAAACAG+TGG 0.595907 2_3:-57323142 None:intergenic
AAGACCAGATGTCAAATCCA+AGG 0.596011 2_3:-57327217 None:intergenic
GCGAACTAAAACAGCAGGAG+TGG 0.597135 2_3:-57326460 None:intergenic
CATATGATCAAGCCGTCGCG+TGG 0.597983 2_3:+57328152 Msa0301350:CDS
CACTGAAATAGTAACACCCT+CGG 0.598397 2_3:-57326229 None:intergenic
TCCAGCGTTAACACTTCTGG+TGG 0.599839 2_3:+57327426 Msa0301350:CDS
CCGGACATACTGACGTGCCA+TGG 0.600199 2_3:-57327358 None:intergenic
CTAAGCCTAGTTCATTGAGA+AGG 0.603333 2_3:+57324026 Msa0301350:CDS
TTGATTCGACCATGTGAAGG+TGG 0.604580 2_3:+57325636 Msa0301350:CDS
GATTAGGAAGAAGATGGCTA+TGG 0.605721 2_3:+57323886 Msa0301350:exon
ATCGATCCTCCACCTTCACA+TGG 0.606610 2_3:-57325645 None:intergenic
CTGAACTGTGATGGTGCCGA+GGG 0.608315 2_3:+57326213 Msa0301350:CDS
AATTGAACTTGTTTACACAC+AGG 0.608400 2_3:+57325271 Msa0301350:CDS
ATGTTCCCAGCTGGAAATGG+AGG 0.609193 2_3:+57325245 Msa0301350:CDS
GGAATTGATGAGAATGCTGT+GGG 0.610922 2_3:+57326963 Msa0301350:CDS
TGTTCAATTGTATGTCCAAG+AGG 0.610991 2_3:-57326615 None:intergenic
GCGGAAACCAGAAGGCACCA+AGG 0.611214 2_3:-57327042 None:intergenic
TGATTCTCTACCTTCATCCC+AGG 0.611915 2_3:-57324829 None:intergenic
GCCGCCTCACAGTTTGCGAG+GGG 0.611955 2_3:+57325591 Msa0301350:CDS
AATTGGAGCAAATATGAGCT+CGG 0.611962 2_3:-57326994 None:intergenic
GACATATGCTCCAATGACGC+TGG 0.613023 2_3:+57325369 Msa0301350:intron
CCTATGGCTATCCTGGAATG+AGG 0.613041 2_3:+57326559 Msa0301350:CDS
ATATGCTACTGAAACATTTG+TGG 0.613265 2_3:+57327655 Msa0301350:CDS
CCTCATTCCAGGATAGCCAT+AGG 0.613471 2_3:-57326559 None:intergenic
CAGATTCCTATCAATTGCGG+AGG 0.615563 2_3:+57324747 Msa0301350:intron
ACCCCTCGCAAACTGTGAGG+CGG 0.618980 2_3:-57325592 None:intergenic
ATAAACACAAACCTTATTTG+GGG 0.620329 2_3:+57323767 Msa0301350:five_prime_UTR
GCTCCAAATGCTGACAGTAG+TGG 0.622596 2_3:+57324576 Msa0301350:CDS
GAATTTAATAAAATGAAGTG+GGG 0.626018 2_3:+57328463 Msa0301350:three_prime_UTR
AGGACAATGCGGAAACCAGA+AGG 0.626123 2_3:-57327050 None:intergenic
TTTGGAAAACGGTAGTGTTG+TGG 0.626702 2_3:+57325432 Msa0301350:CDS
AAGTGGTGTATAGCATGGGT+CGG 0.629287 2_3:+57325995 Msa0301350:CDS
CAGTAGTGGCGTTGATTCTG+CGG 0.629911 2_3:+57324590 Msa0301350:CDS
CTGAAAGCAGTCATTATCTG+GGG 0.631210 2_3:+57327598 Msa0301350:intron
TAAGTGCTTCTGGAGTGCCA+GGG 0.631518 2_3:-57327461 None:intergenic
AATTGATGAGAATGCTGTGG+GGG 0.634959 2_3:+57326965 Msa0301350:CDS
TGGTGAAGTGGTGTATAGCA+TGG 0.636847 2_3:+57325990 Msa0301350:CDS
AAGTGCTTCTGGAGTGCCAG+GGG 0.637051 2_3:-57327460 None:intergenic
TTCTCAAGGTGGCAACGGAG+TGG 0.637931 2_3:+57325007 Msa0301350:CDS
GGCTCTACAGGATATCACAC+TGG 0.641498 2_3:+57327883 Msa0301350:CDS
TACTTGATTCGACCATGTGA+AGG 0.642378 2_3:+57325633 Msa0301350:CDS
CATGTTGGAAACAACTCTAG+TGG 0.653127 2_3:+57327862 Msa0301350:CDS
GCTCTCAAAAGGAAACTGGA+AGG 0.655094 2_3:-57327313 None:intergenic
GAGATGCTAATAGCCCTGCT+GGG 0.656369 2_3:+57324637 Msa0301350:CDS
AGCTCAGAGACTGACAATTG+CGG 0.657205 2_3:+57325843 Msa0301350:CDS
TGGAATTGATGAGAATGCTG+TGG 0.658575 2_3:+57326962 Msa0301350:CDS
GGTGAAGTGGTGTATAGCAT+GGG 0.661299 2_3:+57325991 Msa0301350:CDS
ATATTTGCCATTTCTCAAGG+TGG 0.661399 2_3:+57324996 Msa0301350:CDS
CAAGTAGCTCAAGAAACAAG+TGG 0.662122 2_3:+57325970 Msa0301350:CDS
GGAGTGGCAGCTAGAGCCTG+TGG 0.662427 2_3:+57325023 Msa0301350:CDS
GTCGAATCAAGTAACCACTA+GGG 0.663280 2_3:-57325623 None:intergenic
AGCATGCACTTTCCACGCGA+CGG 0.663627 2_3:-57328164 None:intergenic
AACCAAACCTTGATCTGCTT+AGG 0.671065 2_3:-57324091 None:intergenic
AGGGGTGAAATGCTCCCTAG+TGG 0.672086 2_3:+57325609 Msa0301350:CDS
AAACAGTGGGAATAAAGTCA+GGG 0.676082 2_3:-57323128 None:intergenic
GGAGTGTGCCAGAAGTGCTG+CGG 0.679106 2_3:+57325794 Msa0301350:CDS
ATTCGTCTGGCAAATATGTG+CGG 0.682465 2_3:+57323954 Msa0301350:CDS
TTCACCCCTCGCAAACTGTG+AGG 0.686772 2_3:-57325595 None:intergenic
TCCACCAGAAGTGTTAACGC+TGG 0.686791 2_3:-57327427 None:intergenic
ATTTGCGACGATTCATAGAG+CGG 0.688818 2_3:-57325817 None:intergenic
TGAAAGCAGTCATTATCTGG+GGG 0.689197 2_3:+57327599 Msa0301350:intron
GTCATTAGAAACAAACAACA+AGG 0.690599 2_3:+57323017 Msa0301350:five_prime_UTR
AGTTCCCTTTCACTCCTCGG+AGG 0.693831 2_3:+57326291 Msa0301350:CDS
TTGCACAGACAATTCCTCCG+AGG 0.702683 2_3:-57326305 None:intergenic
GAGAATTCAACAGGACAATG+CGG 0.705796 2_3:-57327061 None:intergenic
ACATACAATTGAACATGACG+AGG 0.707283 2_3:+57326623 Msa0301350:CDS
GATGAATAAGCTGTTGATGG+AGG 0.710323 2_3:+57324306 Msa0301350:CDS
ATCCTGGAATGAGGTCTACG+AGG 0.714524 2_3:+57326568 Msa0301350:CDS
GAATTGATGAGAATGCTGTG+GGG 0.719666 2_3:+57326964 Msa0301350:CDS
TGTTGATGGAGGAAAATGAG+AGG 0.721292 2_3:+57324317 Msa0301350:CDS
GGTTTAGGTGGTCTACAATG+TGG 0.731869 2_3:-57325671 None:intergenic
GGATCTGCATGTCAACAATG+GGG 0.742598 2_3:+57328119 Msa0301350:CDS
CTTGAGCAAGACCTTCAAGG+CGG 0.775739 2_3:-57326793 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAAAAAAACAGTTTTTTTT+TGG - chr2_3:57323486-57323505 None:intergenic 10.0%
!!! AATTTTTACGACTTTTTTTA+TGG + chr2_3:57323394-57323413 Msa0301350:five_prime_UTR 15.0%
!! AAAACAAATACAAAAACAAA+GGG - chr2_3:57324149-57324168 None:intergenic 15.0%
!!! ATACATTTTTTTTTGTGAAA+TGG + chr2_3:57324438-57324457 Msa0301350:intron 15.0%
!! GCTCAATAAATAATAAATAA+AGG - chr2_3:57325321-57325340 None:intergenic 15.0%
!! GATTTAATATAATTTCACTT+TGG + chr2_3:57325517-57325536 Msa0301350:intron 15.0%
!! AAAGAAAATAAGAATATAGT+AGG - chr2_3:57325731-57325750 None:intergenic 15.0%
!! TTTATATACTTTCTATGATT+TGG + chr2_3:57326728-57326747 Msa0301350:intron 15.0%
!! TAGAATTTAATAAAATGAAG+TGG + chr2_3:57328461-57328480 Msa0301350:three_prime_UTR 15.0%
!! AGAATTTAATAAAATGAAGT+GGG + chr2_3:57328462-57328481 Msa0301350:three_prime_UTR 15.0%
!!! AAGAAGTACTTAAGTTAAAA+GGG + chr2_3:57323356-57323375 Msa0301350:five_prime_UTR 20.0%
!!! TTTTTTTATGGCTTTTACAT+TGG + chr2_3:57323406-57323425 Msa0301350:five_prime_UTR 20.0%
!!! TTTTTTATGGCTTTTACATT+GGG + chr2_3:57323407-57323426 Msa0301350:five_prime_UTR 20.0%
!!! TTTTTTTGTCTCAAAAAAAC+CGG - chr2_3:57323540-57323559 None:intergenic 20.0%
!!! ATAAAAAGTAACGGTTTTTA+AGG + chr2_3:57323600-57323619 Msa0301350:five_prime_UTR 20.0%
!!! TATAAACACAAACCTTATTT+GGG + chr2_3:57323766-57323785 Msa0301350:five_prime_UTR 20.0%
!!! AAGGTTTTTAATTTGAGATT+AGG + chr2_3:57323870-57323889 Msa0301350:five_prime_UTR 20.0%
!! CAAAACAAATACAAAAACAA+AGG - chr2_3:57324150-57324169 None:intergenic 20.0%
!!! TTTGATTTGTGGTTTTTTTT+TGG + chr2_3:57324213-57324232 Msa0301350:intron 20.0%
!! AATGAAAATGAACAATGATA+GGG - chr2_3:57324411-57324430 None:intergenic 20.0%
!! AAATGGTAATTATCATTGTT+TGG + chr2_3:57324455-57324474 Msa0301350:intron 20.0%
!! TTGTATGATATGATATGATT+TGG + chr2_3:57324494-57324513 Msa0301350:intron 20.0%
!! TGTATGATATGATATGATTT+GGG + chr2_3:57324495-57324514 Msa0301350:intron 20.0%
!! GTAAATATAGTATGAGATAT+TGG - chr2_3:57324935-57324954 None:intergenic 20.0%
!! TGAAAAATTTCAATAGATTG+TGG + chr2_3:57325163-57325182 Msa0301350:intron 20.0%
!! TAATATAATTTCACTTTGGA+AGG + chr2_3:57325521-57325540 Msa0301350:intron 20.0%
!!! CATGATTAATATTTTCTTCT+AGG + chr2_3:57325768-57325787 Msa0301350:intron 20.0%
!! AGTTACATTAAAATCTTTGA+AGG - chr2_3:57327777-57327796 None:intergenic 20.0%
!!! TGTTGTTTAAAACAAATTTG+AGG - chr2_3:57328023-57328042 None:intergenic 20.0%
!!! TTTACAAGATCAAATCATTT+TGG - chr2_3:57328428-57328447 None:intergenic 20.0%
!! GAATTTAATAAAATGAAGTG+GGG + chr2_3:57328463-57328482 Msa0301350:three_prime_UTR 20.0%
!!! AAATGAAGTTTTGAACTAGT+TGG - chr2_3:57323286-57323305 None:intergenic 25.0%
!!! GAAGAAGTACTTAAGTTAAA+AGG + chr2_3:57323355-57323374 Msa0301350:five_prime_UTR 25.0%
!!! TACGCGTTTTTCTTTTATTT+GGG - chr2_3:57323439-57323458 None:intergenic 25.0%
!! TTACGCGTTTTTCTTTTATT+TGG - chr2_3:57323440-57323459 None:intergenic 25.0%
!!! AAACAGTTTTTTTTTGGACT+TGG - chr2_3:57323480-57323499 None:intergenic 25.0%
! ATAAGACAGCAAAAAAATTC+CGG + chr2_3:57323518-57323537 Msa0301350:five_prime_UTR 25.0%
!!! TTACTTTTTATTTCCTCTTC+TGG - chr2_3:57323591-57323610 None:intergenic 25.0%
! GAAGAGGAAATAAAAAGTAA+CGG + chr2_3:57323591-57323610 Msa0301350:five_prime_UTR 25.0%
!!! TTTTTAAGGTTGTATGAACA+AGG + chr2_3:57323614-57323633 Msa0301350:five_prime_UTR 25.0%
! CTATAAACACAAACCTTATT+TGG + chr2_3:57323765-57323784 Msa0301350:five_prime_UTR 25.0%
!! ATAAACACAAACCTTATTTG+GGG + chr2_3:57323767-57323786 Msa0301350:five_prime_UTR 25.0%
!!! CCTCTTTTGGTTTTATTTTA+GGG + chr2_3:57323836-57323855 Msa0301350:five_prime_UTR 25.0%
! GAATGAAAATGAACAATGAT+AGG - chr2_3:57324412-57324431 None:intergenic 25.0%
! TAATTATCATTGTTTGGTTG+AGG + chr2_3:57324461-57324480 Msa0301350:intron 25.0%
! ATATTGTGATGATTATGACA+TGG + chr2_3:57324892-57324911 Msa0301350:intron 25.0%
! AATATAGTATGAGATATTGG+TGG - chr2_3:57324932-57324951 None:intergenic 25.0%
! ACCTACTAAGGTAATTAAAA+AGG + chr2_3:57325061-57325080 Msa0301350:intron 25.0%
! CCTACTAAGGTAATTAAAAA+GGG + chr2_3:57325062-57325081 Msa0301350:intron 25.0%
! CTACTAAGGTAATTAAAAAG+GGG + chr2_3:57325063-57325082 Msa0301350:intron 25.0%
!! TCTAAGATACACTACAAATT+TGG + chr2_3:57325414-57325433 Msa0301350:CDS 25.0%
! TACACTACAAATTTGGAAAA+CGG + chr2_3:57325421-57325440 Msa0301350:CDS 25.0%
!! TTAATATTTTCTTCTAGGCA+TGG + chr2_3:57325773-57325792 Msa0301350:intron 25.0%
! AATTCAATCAAGAATTTGAG+TGG + chr2_3:57326252-57326271 Msa0301350:CDS 25.0%
!!! AAGATGATTCTTTTGTTTCT+AGG + chr2_3:57326813-57326832 Msa0301350:CDS 25.0%
!!! AGATGATTCTTTTGTTTCTA+GGG + chr2_3:57326814-57326833 Msa0301350:CDS 25.0%
! AAGTAAACAAACCATAACAA+GGG - chr2_3:57326870-57326889 None:intergenic 25.0%
! TTGTTTACTTGCATGTTTAT+CGG + chr2_3:57326880-57326899 Msa0301350:intron 25.0%
!!! GTATTTGATTTTTCTCTAAC+CGG + chr2_3:57327107-57327126 Msa0301350:intron 25.0%
!!! TGTTTTTGTATTCAACATGT+GGG - chr2_3:57328282-57328301 None:intergenic 25.0%
!!! TTGTTTTTGTATTCAACATG+TGG - chr2_3:57328283-57328302 None:intergenic 25.0%
! ACATGTTGAATACAAAAACA+AGG + chr2_3:57328282-57328301 Msa0301350:three_prime_UTR 25.0%
! CATGTTGAATACAAAAACAA+GGG + chr2_3:57328283-57328302 Msa0301350:three_prime_UTR 25.0%
!! AATCAGGATAGAATTTTGAA+AGG + chr2_3:57328309-57328328 Msa0301350:three_prime_UTR 25.0%
!!! ATCAGGATAGAATTTTGAAA+GGG + chr2_3:57328310-57328329 Msa0301350:three_prime_UTR 25.0%
!!! TTGGATTAGTTTTGTTACTT+TGG + chr2_3:57328394-57328413 Msa0301350:three_prime_UTR 25.0%
GTCATTAGAAACAAACAACA+AGG + chr2_3:57323017-57323036 Msa0301350:five_prime_UTR 30.0%
AGTACTTAAGTTAAAAGGGT+CGG + chr2_3:57323360-57323379 Msa0301350:five_prime_UTR 30.0%
!!! GCCTCTTTTGGTTTTATTTT+AGG + chr2_3:57323835-57323854 Msa0301350:five_prime_UTR 30.0%
CCCTAAAATAAAACCAAAAG+AGG - chr2_3:57323839-57323858 None:intergenic 30.0%
!!! TTTTAGGGTGTGATTGTTTA+AGG + chr2_3:57323851-57323870 Msa0301350:five_prime_UTR 30.0%
! ATTTGAGATTAGGAAGAAGA+TGG + chr2_3:57323880-57323899 Msa0301350:exon 30.0%
TTGAATTTGTGTTGTGTGAA+AGG + chr2_3:57324167-57324186 Msa0301350:intron 30.0%
! TGTTAGTTTAGAACCTACTA+AGG + chr2_3:57325049-57325068 Msa0301350:CDS 30.0%
!! CCCTTTTTAATTACCTTAGT+AGG - chr2_3:57325065-57325084 None:intergenic 30.0%
GTAATTAAAAAGGGGACATA+TGG + chr2_3:57325071-57325090 Msa0301350:intron 30.0%
! AATTGAACTTGTTTACACAC+AGG + chr2_3:57325271-57325290 Msa0301350:CDS 30.0%
AATGCATTACTATTGTTGCA+TGG + chr2_3:57325473-57325492 Msa0301350:intron 30.0%
ATGCATTACTATTGTTGCAT+GGG + chr2_3:57325474-57325493 Msa0301350:intron 30.0%
GCATTATTAATTCACGATGT+AGG + chr2_3:57325874-57325893 Msa0301350:intron 30.0%
GACTAATGTGATTAGTACTA+TGG + chr2_3:57325918-57325937 Msa0301350:intron 30.0%
! TTCTTAGAACTTTTAGCCAA+CGG + chr2_3:57326028-57326047 Msa0301350:CDS 30.0%
TTTAAACATCATTCTTGCAG+AGG + chr2_3:57326144-57326163 Msa0301350:intron 30.0%
TAGTTCTTCTAATCGTTACA+CGG + chr2_3:57326406-57326425 Msa0301350:intron 30.0%
ATTTGCATTTGGCTAAGATT+TGG + chr2_3:57326705-57326724 Msa0301350:intron 30.0%
CAAGTAAACAAACCATAACA+AGG - chr2_3:57326871-57326890 None:intergenic 30.0%
! AACTGTTCAAATGATGATGA+TGG - chr2_3:57326936-57326955 None:intergenic 30.0%
TCATTTGAACAGTTATGTAC+TGG + chr2_3:57326942-57326961 Msa0301350:intron 30.0%
TACTGTGCTTCATATATGAA+CGG - chr2_3:57327135-57327154 None:intergenic 30.0%
ATATGCTACTGAAACATTTG+TGG + chr2_3:57327655-57327674 Msa0301350:CDS 30.0%
! TATTTTATGCTGCTCTTTGA+AGG + chr2_3:57327692-57327711 Msa0301350:CDS 30.0%
! TATGTCCATGATCTCATTTT+AGG + chr2_3:57327715-57327734 Msa0301350:intron 30.0%
! ATGTCCATGATCTCATTTTA+GGG + chr2_3:57327716-57327735 Msa0301350:intron 30.0%
!!! TTTTAGGGTACAATTGAATC+TGG + chr2_3:57327731-57327750 Msa0301350:intron 30.0%
TCATTTATATGACCTATTGC+AGG + chr2_3:57328232-57328251 Msa0301350:exon 30.0%
ATGTGGGAAAAAAAAAAGTG+GGG - chr2_3:57328266-57328285 None:intergenic 30.0%
CATGTGGGAAAAAAAAAAGT+GGG - chr2_3:57328267-57328286 None:intergenic 30.0%
ACATGTGGGAAAAAAAAAAG+TGG - chr2_3:57328268-57328287 None:intergenic 30.0%
! CATGTTTGGATCATTTTCAT+TGG + chr2_3:57328375-57328394 Msa0301350:three_prime_UTR 30.0%
AAACAGTGGGAATAAAGTCA+GGG - chr2_3:57323131-57323150 None:intergenic 35.0%
TTCTTGAACAAGCTTAGCTT+AGG + chr2_3:57323224-57323243 Msa0301350:five_prime_UTR 35.0%
TCTTGAACAAGCTTAGCTTA+GGG + chr2_3:57323225-57323244 Msa0301350:five_prime_UTR 35.0%
AAGTACTTCTTCTTCCTCTA+TGG - chr2_3:57323347-57323366 None:intergenic 35.0%
! AAAAAAACATTTGCTGCCAC+TGG + chr2_3:57323553-57323572 Msa0301350:five_prime_UTR 35.0%
!! GTTTTGTTGAAAACCAGAAG+AGG + chr2_3:57323575-57323594 Msa0301350:five_prime_UTR 35.0%
GGATTTCATGTTTCACTAGT+TGG + chr2_3:57323635-57323654 Msa0301350:five_prime_UTR 35.0%
GTTTCACTAGTTGGAACTAT+TGG + chr2_3:57323644-57323663 Msa0301350:five_prime_UTR 35.0%
! TTGTGTTGTATTGCCTCTTT+TGG + chr2_3:57323823-57323842 Msa0301350:five_prime_UTR 35.0%
!! ACAGATTGAAGCTTTGGAAA+AGG + chr2_3:57323988-57324007 Msa0301350:CDS 35.0%
!! AGCTTTGGAAAAGGTTTATG+TGG + chr2_3:57323997-57324016 Msa0301350:CDS 35.0%
TTCTCAATGAACTAGGCTTA+GGG - chr2_3:57324027-57324046 None:intergenic 35.0%
! TCAAGGTTTGGTTTCAGAAT+AGG + chr2_3:57324101-57324120 Msa0301350:CDS 35.0%
! TTGTGTTGTGTGAAAGGTTT+TGG + chr2_3:57324173-57324192 Msa0301350:intron 35.0%
!! TAGTTGTGCGATTTGATTTG+TGG + chr2_3:57324202-57324221 Msa0301350:intron 35.0%
!!! GTGGTTTTTTTTTGGTTTGC+AGG + chr2_3:57324221-57324240 Msa0301350:intron 35.0%
!!! TTTTTTTGGTTTGCAGGTGT+AGG + chr2_3:57324227-57324246 Msa0301350:intron 35.0%
!!! TTTTTTGGTTTGCAGGTGTA+GGG + chr2_3:57324228-57324247 Msa0301350:intron 35.0%
GCATCTCTCAATGAATTCAT+AGG - chr2_3:57324624-57324643 None:intergenic 35.0%
AACTTCAAAATTACCCAGCA+GGG - chr2_3:57324653-57324672 None:intergenic 35.0%
TTGCAGATTCCTATCAATTG+CGG + chr2_3:57324744-57324763 Msa0301350:intron 35.0%
TTGTGATGATTATGACATGG+AGG + chr2_3:57324895-57324914 Msa0301350:intron 35.0%
TAGTATGAGATATTGGTGGA+AGG - chr2_3:57324928-57324947 None:intergenic 35.0%
! ATATTTGCCATTTCTCAAGG+TGG + chr2_3:57324996-57325015 Msa0301350:CDS 35.0%
TTCTAAACTAACAAGACCAC+AGG - chr2_3:57325042-57325061 None:intergenic 35.0%
TTAAAAAGGGGACATATGGA+TGG + chr2_3:57325075-57325094 Msa0301350:intron 35.0%
GTGAAGAATCAAACGTGAAT+AGG + chr2_3:57325293-57325312 Msa0301350:intron 35.0%
ATAGTAGGCATTCAAGCTAA+TGG - chr2_3:57325716-57325735 None:intergenic 35.0%
TAGGATTCTATTGCAAGCTT+TGG + chr2_3:57325893-57325912 Msa0301350:intron 35.0%
!! CTAAAAGTTCTAAGAACTGC+AGG - chr2_3:57326024-57326043 None:intergenic 35.0%
! GTCAATGGATTCAATGATGA+TGG + chr2_3:57326180-57326199 Msa0301350:CDS 35.0%
! AATGGATTCACGAACTTACT+TGG - chr2_3:57326347-57326366 None:intergenic 35.0%
AAGTAAGTTCGTGAATCCAT+TGG + chr2_3:57326346-57326365 Msa0301350:intron 35.0%
!!! TGTTTTAGTTCGCTTTCTGA+GGG + chr2_3:57326470-57326489 Msa0301350:CDS 35.0%
TTTAAGTGATGCAGCAGAAA+AGG - chr2_3:57326532-57326551 None:intergenic 35.0%
TGTTCAATTGTATGTCCAAG+AGG - chr2_3:57326618-57326637 None:intergenic 35.0%
ACATACAATTGAACATGACG+AGG + chr2_3:57326623-57326642 Msa0301350:CDS 35.0%
ATCAGAAAAAGACATGGTCA+AGG - chr2_3:57326674-57326693 None:intergenic 35.0%
! TTGACCATGTCTTTTTCTGA+TGG + chr2_3:57326673-57326692 Msa0301350:intron 35.0%
TCTACCATCAGAAAAAGACA+TGG - chr2_3:57326680-57326699 None:intergenic 35.0%
GGTAGATGCATATTTGCATT+TGG + chr2_3:57326694-57326713 Msa0301350:intron 35.0%
AATTGGAGCAAATATGAGCT+CGG - chr2_3:57326997-57327016 None:intergenic 35.0%
TTGACGTCATATTGTGTTTC+AGG + chr2_3:57327161-57327180 Msa0301350:intron 35.0%
TGACGTCATATTGTGTTTCA+GGG + chr2_3:57327162-57327181 Msa0301350:intron 35.0%
GACAAGAGATATAGAAAGAG+AGG - chr2_3:57327579-57327598 None:intergenic 35.0%
TCTGAAAGCAGTCATTATCT+GGG + chr2_3:57327597-57327616 Msa0301350:intron 35.0%
CTGAGATCTGATTCTCTTAT+TGG + chr2_3:57327630-57327649 Msa0301350:CDS 35.0%
TGTACCCTAAAATGAGATCA+TGG - chr2_3:57327723-57327742 None:intergenic 35.0%
TGTAACTTCTCTATCCTGTT+TGG + chr2_3:57327790-57327809 Msa0301350:intron 35.0%
TGGTTAGCAAAGATGAATAC+GGG - chr2_3:57327830-57327849 None:intergenic 35.0%
CTGGTTAGCAAAGATGAATA+CGG - chr2_3:57327831-57327850 None:intergenic 35.0%
!!! TGCATGCATTTTTTTCGTTC+AGG + chr2_3:57328075-57328094 Msa0301350:intron 35.0%
!!! GCATGCATTTTTTTCGTTCA+GGG + chr2_3:57328076-57328095 Msa0301350:intron 35.0%
!!! CATGCATTTTTTTCGTTCAG+GGG + chr2_3:57328077-57328096 Msa0301350:intron 35.0%
TGGCTTTCTCGTTCATTAAT+TGG + chr2_3:57328209-57328228 Msa0301350:CDS 35.0%
! ACAAAAACAAGGGTACAATC+AGG + chr2_3:57328293-57328312 Msa0301350:three_prime_UTR 35.0%
GCACATTACAAGATCATGTT+TGG + chr2_3:57328361-57328380 Msa0301350:three_prime_UTR 35.0%
GAAACAGTGGGAATAAAGTC+AGG - chr2_3:57323132-57323151 None:intergenic 40.0%
!! CTGGTTTTCAACAAAACCAG+TGG - chr2_3:57323572-57323591 None:intergenic 40.0%
CACTCTTAAGACCCCAAATA+AGG - chr2_3:57323781-57323800 None:intergenic 40.0%
GATTAGGAAGAAGATGGCTA+TGG + chr2_3:57323886-57323905 Msa0301350:exon 40.0%
CATATTTGCCAGACGAATCA+AGG - chr2_3:57323952-57323971 None:intergenic 40.0%
ATTCGTCTGGCAAATATGTG+CGG + chr2_3:57323954-57323973 Msa0301350:CDS 40.0%
TGCTGAACAGATTGAAGCTT+TGG + chr2_3:57323982-57324001 Msa0301350:CDS 40.0%
CTTCTCAATGAACTAGGCTT+AGG - chr2_3:57324028-57324047 None:intergenic 40.0%
CTAAGCCTAGTTCATTGAGA+AGG + chr2_3:57324026-57324045 Msa0301350:CDS 40.0%
TGTTGCCTTCTCAATGAACT+AGG - chr2_3:57324034-57324053 None:intergenic 40.0%
AACCAAACCTTGATCTGCTT+AGG - chr2_3:57324094-57324113 None:intergenic 40.0%
! AGGTTTGGTTTCAGAATAGG+AGG + chr2_3:57324104-57324123 Msa0301350:CDS 40.0%
TGCGATGAATAAGCTGTTGA+TGG + chr2_3:57324303-57324322 Msa0301350:CDS 40.0%
! GATGAATAAGCTGTTGATGG+AGG + chr2_3:57324306-57324325 Msa0301350:CDS 40.0%
! TGTTGATGGAGGAAAATGAG+AGG + chr2_3:57324317-57324336 Msa0301350:CDS 40.0%
GAACTTCAAAATTACCCAGC+AGG - chr2_3:57324654-57324673 None:intergenic 40.0%
ATTGGCAGAGTTCCTTTCAA+AGG + chr2_3:57324774-57324793 Msa0301350:CDS 40.0%
GTAGAGAATCATGCTTCTAG+TGG + chr2_3:57324841-57324860 Msa0301350:intron 40.0%
! TCATGCTTCTAGTGGACAAT+TGG + chr2_3:57324849-57324868 Msa0301350:intron 40.0%
! TCAACCATTGTTTGTTAGCC+TGG + chr2_3:57324957-57324976 Msa0301350:intron 40.0%
! GGGATATTTGCCATTTCTCA+AGG + chr2_3:57324993-57325012 Msa0301350:CDS 40.0%
GACAATCACGATACCAAGTT+GGG - chr2_3:57325205-57325224 None:intergenic 40.0%
CAACTTGGTATCGTGATTGT+CGG + chr2_3:57325204-57325223 Msa0301350:CDS 40.0%
TTTGGAAAACGGTAGTGTTG+TGG + chr2_3:57325432-57325451 Msa0301350:CDS 40.0%
! CACTTTGGAAGGTTTGTGAA+AGG + chr2_3:57325532-57325551 Msa0301350:intron 40.0%
GTCGAATCAAGTAACCACTA+GGG - chr2_3:57325626-57325645 None:intergenic 40.0%
! TACTTGATTCGACCATGTGA+AGG + chr2_3:57325633-57325652 Msa0301350:CDS 40.0%
ATTTGCGACGATTCATAGAG+CGG - chr2_3:57325820-57325839 None:intergenic 40.0%
! TAGTACTATGGCTTTTGTGC+AGG + chr2_3:57325930-57325949 Msa0301350:intron 40.0%
CAAGTAGCTCAAGAAACAAG+TGG + chr2_3:57325970-57325989 Msa0301350:CDS 40.0%
TCAAGAAACAAGTGGTGAAG+TGG + chr2_3:57325978-57325997 Msa0301350:CDS 40.0%
TGCAAAAAGCAGGCTGAAAT+AGG - chr2_3:57326095-57326114 None:intergenic 40.0%
CAGATCATTCTGCAAAAAGC+AGG - chr2_3:57326105-57326124 None:intergenic 40.0%
TGCAGAATGATCTGTTGTGT+TGG + chr2_3:57326111-57326130 Msa0301350:intron 40.0%
!! ATGGATTCAATGATGATGGC+TGG + chr2_3:57326184-57326203 Msa0301350:CDS 40.0%
CACTGAAATAGTAACACCCT+CGG - chr2_3:57326232-57326251 None:intergenic 40.0%
AGAAAGCGAACTAAAACAGC+AGG - chr2_3:57326468-57326487 None:intergenic 40.0%
!!! CTGTTTTAGTTCGCTTTCTG+AGG + chr2_3:57326469-57326488 Msa0301350:CDS 40.0%
AATCAAGCAATCATGCCTCT+TGG + chr2_3:57326600-57326619 Msa0301350:CDS 40.0%
CTAGAAATTATCCGCCTTGA+AGG + chr2_3:57326782-57326801 Msa0301350:CDS 40.0%
TAGGGATGTTCATCTCTTAC+AGG + chr2_3:57326832-57326851 Msa0301350:CDS 40.0%
TGGAATTGATGAGAATGCTG+TGG + chr2_3:57326962-57326981 Msa0301350:CDS 40.0%
GGAATTGATGAGAATGCTGT+GGG + chr2_3:57326963-57326982 Msa0301350:CDS 40.0%
GAATTGATGAGAATGCTGTG+GGG + chr2_3:57326964-57326983 Msa0301350:CDS 40.0%
AATTGATGAGAATGCTGTGG+GGG + chr2_3:57326965-57326984 Msa0301350:CDS 40.0%
TCTGGGAACATGTCATCAAT+TGG - chr2_3:57327014-57327033 None:intergenic 40.0%
GAGAATTCAACAGGACAATG+CGG - chr2_3:57327064-57327083 None:intergenic 40.0%
CAACTGGTTGAGAATTCAAC+AGG - chr2_3:57327073-57327092 None:intergenic 40.0%
ACAAAGAAACGTGACTCAAC+TGG - chr2_3:57327089-57327108 None:intergenic 40.0%
GCTTCATATATGAACGGTAC+CGG - chr2_3:57327129-57327148 None:intergenic 40.0%
AAGACCAGATGTCAAATCCA+AGG - chr2_3:57327220-57327239 None:intergenic 40.0%
!! TTCCAGTTTCCTTTTGAGAG+CGG + chr2_3:57327315-57327334 Msa0301350:CDS 40.0%
AAGCACTTACACTAGCTCAA+TGG + chr2_3:57327475-57327494 Msa0301350:CDS 40.0%
GTCTGAAAGCAGTCATTATC+TGG + chr2_3:57327596-57327615 Msa0301350:intron 40.0%
CTGAAAGCAGTCATTATCTG+GGG + chr2_3:57327598-57327617 Msa0301350:intron 40.0%
TGAAAGCAGTCATTATCTGG+GGG + chr2_3:57327599-57327618 Msa0301350:intron 40.0%
GAGCAGCATAAAATAGCATC+TGG - chr2_3:57327687-57327706 None:intergenic 40.0%
CGTATTCATCTTTGCTAACC+AGG + chr2_3:57327829-57327848 Msa0301350:CDS 40.0%
! GAGTTGTTTCCAACATGTCA+AGG - chr2_3:57327859-57327878 None:intergenic 40.0%
CATGTTGGAAACAACTCTAG+TGG + chr2_3:57327862-57327881 Msa0301350:CDS 40.0%
! TTTTGCGAAGTTAATGCAGC+AGG + chr2_3:57327949-57327968 Msa0301350:CDS 40.0%
CGCTATGCTCTTAAAGTAGA+TGG + chr2_3:57328043-57328062 Msa0301350:intron 40.0%
AGACAACAGTGTTCATTGCT+TGG + chr2_3:57328189-57328208 Msa0301350:CDS 40.0%
GGGGATTTAAATCCTGCAAT+AGG - chr2_3:57328247-57328266 None:intergenic 40.0%
GTGATCTGAGCTGAAACAGT+GGG - chr2_3:57323144-57323163 None:intergenic 45.0%
AGTGATCTGAGCTGAAACAG+TGG - chr2_3:57323145-57323164 None:intergenic 45.0%
TTCTTCCTCAAGCTCCATAG+AGG + chr2_3:57323330-57323349 Msa0301350:five_prime_UTR 45.0%
TTCTTCCTCTATGGAGCTTG+AGG - chr2_3:57323338-57323357 None:intergenic 45.0%
TGAGAAGGCAACAGCTGATT+CGG + chr2_3:57324041-57324060 Msa0301350:CDS 45.0%
GATCTGCTTAGGCTCAATGT+TGG - chr2_3:57324083-57324102 None:intergenic 45.0%
CATTGAGCCTAAGCAGATCA+AGG + chr2_3:57324084-57324103 Msa0301350:CDS 45.0%
AGCCTAAGCAGATCAAGGTT+TGG + chr2_3:57324089-57324108 Msa0301350:CDS 45.0%
TAGGGAGAAGCAGAGAAAAG+AGG + chr2_3:57324246-57324265 Msa0301350:CDS 45.0%
TCACAGCTGGTGAATGAGAA+TGG + chr2_3:57324355-57324374 Msa0301350:CDS 45.0%
CAGATTCCTATCAATTGCGG+AGG + chr2_3:57324747-57324766 Msa0301350:intron 45.0%
ATGTCTCCTCCGCAATTGAT+AGG - chr2_3:57324756-57324775 None:intergenic 45.0%
ATCAATTGCGGAGGAGACAT+TGG + chr2_3:57324756-57324775 Msa0301350:CDS 45.0%
GAGTTCCTTTCAAAGGCTAC+AGG + chr2_3:57324781-57324800 Msa0301350:CDS 45.0%
CAGTTCCTGTAGCCTTTGAA+AGG - chr2_3:57324789-57324808 None:intergenic 45.0%
! TACAGGAACTGCTGTCGATT+GGG + chr2_3:57324798-57324817 Msa0301350:CDS 45.0%
TGATTCTCTACCTTCATCCC+AGG - chr2_3:57324832-57324851 None:intergenic 45.0%
! CATTGTTTGTTAGCCTGGTC+CGG + chr2_3:57324962-57324981 Msa0301350:intron 45.0%
GCAAATATCCCAACCGAATC+CGG - chr2_3:57324984-57325003 None:intergenic 45.0%
TCCTAAAAGATCGCCCAACT+TGG + chr2_3:57325189-57325208 Msa0301350:CDS 45.0%
!! ACCAAGTTGGGCGATCTTTT+AGG - chr2_3:57325193-57325212 None:intergenic 45.0%
CGACAATCACGATACCAAGT+TGG - chr2_3:57325206-57325225 None:intergenic 45.0%
! GTTTTCACAATGTTCCCAGC+TGG + chr2_3:57325236-57325255 Msa0301350:CDS 45.0%
ACAATGTTCCCAGCTGGAAA+TGG + chr2_3:57325242-57325261 Msa0301350:CDS 45.0%
TTGTTCCTCCATTTCCAGCT+GGG - chr2_3:57325253-57325272 None:intergenic 45.0%
ATTGTTCCTCCATTTCCAGC+TGG - chr2_3:57325254-57325273 None:intergenic 45.0%
GTTTGTGAAAGGTCACTGTC+TGG + chr2_3:57325543-57325562 Msa0301350:CDS 45.0%
GGTCGAATCAAGTAACCACT+AGG - chr2_3:57325627-57325646 None:intergenic 45.0%
! TTGATTCGACCATGTGAAGG+TGG + chr2_3:57325636-57325655 Msa0301350:CDS 45.0%
GGTTTAGGTGGTCTACAATG+TGG - chr2_3:57325674-57325693 None:intergenic 45.0%
GAACTCAAACCTGCAGGTTT+AGG - chr2_3:57325689-57325708 None:intergenic 45.0%
GCTCTATGAATCGTCGCAAA+TGG + chr2_3:57325819-57325838 Msa0301350:CDS 45.0%
AGCTCAGAGACTGACAATTG+CGG + chr2_3:57325843-57325862 Msa0301350:CDS 45.0%
TGGTGAAGTGGTGTATAGCA+TGG + chr2_3:57325990-57326009 Msa0301350:CDS 45.0%
GGTGAAGTGGTGTATAGCAT+GGG + chr2_3:57325991-57326010 Msa0301350:CDS 45.0%
AAGTGGTGTATAGCATGGGT+CGG + chr2_3:57325995-57326014 Msa0301350:CDS 45.0%
GGTTTCAATGACGCTGTCAA+TGG + chr2_3:57326165-57326184 Msa0301350:CDS 45.0%
! TGGTCTGTTCTGAACTGTGA+TGG + chr2_3:57326204-57326223 Msa0301350:CDS 45.0%
AATTCCTCCGAGGAGTGAAA+GGG - chr2_3:57326298-57326317 None:intergenic 45.0%
AGTTCGTGAATCCATTGGCA+CGG + chr2_3:57326351-57326370 Msa0301350:intron 45.0%
TCTGCTGCATCACTTAAAGC+TGG + chr2_3:57326534-57326553 Msa0301350:CDS 45.0%
! TCACTTAAAGCTGGCTCCTA+TGG + chr2_3:57326543-57326562 Msa0301350:CDS 45.0%
AGGCATGATTGCTTGATTGC+CGG - chr2_3:57326598-57326617 None:intergenic 45.0%
!! GGCGGATAATTTCTAGCATC+TGG - chr2_3:57326778-57326797 None:intergenic 45.0%
CATCTTGAGCAAGACCTTCA+AGG - chr2_3:57326799-57326818 None:intergenic 45.0%
CAAACCATAACAAGGGTCAG+AGG - chr2_3:57326863-57326882 None:intergenic 45.0%
AACAGCAGCAAATCGAACCT+TGG + chr2_3:57327200-57327219 Msa0301350:CDS 45.0%
CGAACCTTGGATTTGACATC+TGG + chr2_3:57327213-57327232 Msa0301350:CDS 45.0%
!! ATCTGGTCTTGAAGTAAGCC+AGG + chr2_3:57327230-57327249 Msa0301350:CDS 45.0%
! GTCAACGCACATCGATTGTT+AGG - chr2_3:57327288-57327307 None:intergenic 45.0%
GCTCTCAAAAGGAAACTGGA+AGG - chr2_3:57327316-57327335 None:intergenic 45.0%
TGAGCTAGTGTAAGTGCTTC+TGG - chr2_3:57327474-57327493 None:intergenic 45.0%
AATGGATCTGCCAGAGCTAT+AGG + chr2_3:57327493-57327512 Msa0301350:CDS 45.0%
GCACACTTTACCTATAGCTC+TGG - chr2_3:57327506-57327525 None:intergenic 45.0%
! CACTTGCTGCAAAACCAAAC+AGG - chr2_3:57327807-57327826 None:intergenic 45.0%
TTCATCTTTGCTAACCAGGC+TGG + chr2_3:57327833-57327852 Msa0301350:CDS 45.0%
! AACAACTCTAGTGGCTCTAC+AGG + chr2_3:57327871-57327890 Msa0301350:CDS 45.0%
GCAGGTAATATCCTCGAGTT+TGG + chr2_3:57327967-57327986 Msa0301350:intron 45.0%
TGGGATCTGCATGTCAACAA+TGG + chr2_3:57328117-57328136 Msa0301350:CDS 45.0%
GGGATCTGCATGTCAACAAT+GGG + chr2_3:57328118-57328137 Msa0301350:CDS 45.0%
GGATCTGCATGTCAACAATG+GGG + chr2_3:57328119-57328138 Msa0301350:CDS 45.0%
! GAGAGACACCTTGATTCGTC+TGG + chr2_3:57323941-57323960 Msa0301350:CDS 50.0%
! GAGAAGGCAACAGCTGATTC+GGG + chr2_3:57324042-57324061 Msa0301350:CDS 50.0%
GCTCAATGTTGGCCAAAACC+GGG - chr2_3:57324072-57324091 None:intergenic 50.0%
GGCTCAATGTTGGCCAAAAC+CGG - chr2_3:57324073-57324092 None:intergenic 50.0%
CTCAGCTTCAGAGTGTGAAC+AGG + chr2_3:57324272-57324291 Msa0301350:CDS 50.0%
AAATGAGAGGCTGCAGAAGC+AGG + chr2_3:57324330-57324349 Msa0301350:CDS 50.0%
GGCTTACAGTGTGCAATTGC+TGG - chr2_3:57324390-57324409 None:intergenic 50.0%
! TGTCAGCATTTGGAGCTGCT+GGG - chr2_3:57324572-57324591 None:intergenic 50.0%
GCTCCAAATGCTGACAGTAG+TGG + chr2_3:57324576-57324595 Msa0301350:CDS 50.0%
ACGCCACTACTGTCAGCATT+TGG - chr2_3:57324582-57324601 None:intergenic 50.0%
!! CAGTAGTGGCGTTGATTCTG+CGG + chr2_3:57324590-57324609 Msa0301350:CDS 50.0%
AGAGATGCTAATAGCCCTGC+TGG + chr2_3:57324636-57324655 Msa0301350:CDS 50.0%
GAGATGCTAATAGCCCTGCT+GGG + chr2_3:57324637-57324656 Msa0301350:CDS 50.0%
CTACAGGAACTGCTGTCGAT+TGG + chr2_3:57324797-57324816 Msa0301350:CDS 50.0%
CGGACCAGGCTAACAAACAA+TGG - chr2_3:57324964-57324983 None:intergenic 50.0%
! TTGTTAGCCTGGTCCGGATT+CGG + chr2_3:57324968-57324987 Msa0301350:intron 50.0%
GCCATTTCTCAAGGTGGCAA+CGG + chr2_3:57325002-57325021 Msa0301350:CDS 50.0%
TCCGTTGCCACCTTGAGAAA+TGG - chr2_3:57325006-57325025 None:intergenic 50.0%
ATGTTCCCAGCTGGAAATGG+AGG + chr2_3:57325245-57325264 Msa0301350:CDS 50.0%
GACATATGCTCCAATGACGC+TGG + chr2_3:57325369-57325388 Msa0301350:intron 50.0%
! GAAAGGTCACTGTCTGGTTC+TGG + chr2_3:57325549-57325568 Msa0301350:CDS 50.0%
ATTCGACCATGTGAAGGTGG+AGG + chr2_3:57325639-57325658 Msa0301350:CDS 50.0%
ATCGATCCTCCACCTTCACA+TGG - chr2_3:57325648-57325667 None:intergenic 50.0%
TGTAGACCACCTAAACCTGC+AGG + chr2_3:57325677-57325696 Msa0301350:CDS 50.0%
CTCAAACCTGCAGGTTTAGG+TGG - chr2_3:57325686-57325705 None:intergenic 50.0%
GGTCAAGAACTCAAACCTGC+AGG - chr2_3:57325695-57325714 None:intergenic 50.0%
TGCAGGCACTTCGCTATATC+AGG + chr2_3:57325947-57325966 Msa0301350:intron 50.0%
! CTTTTAGCCAACGGTTGAGC+AGG + chr2_3:57326037-57326056 Msa0301350:CDS 50.0%
GCAGGCTGAAATAGGTTTCG+AGG - chr2_3:57326087-57326106 None:intergenic 50.0%
AGGAGTGAAAGGGAACTTGC+TGG - chr2_3:57326288-57326307 None:intergenic 50.0%
GCAAGTTCCCTTTCACTCCT+CGG + chr2_3:57326288-57326307 Msa0301350:CDS 50.0%
CAATTCCTCCGAGGAGTGAA+AGG - chr2_3:57326299-57326318 None:intergenic 50.0%
TTGCACAGACAATTCCTCCG+AGG - chr2_3:57326308-57326327 None:intergenic 50.0%
CATTGGCACGGTGCAGTAAA+CGG + chr2_3:57326363-57326382 Msa0301350:intron 50.0%
GCGAACTAAAACAGCAGGAG+TGG - chr2_3:57326463-57326482 None:intergenic 50.0%
CCTCATTCCAGGATAGCCAT+AGG - chr2_3:57326562-57326581 None:intergenic 50.0%
CCTATGGCTATCCTGGAATG+AGG + chr2_3:57326559-57326578 Msa0301350:CDS 50.0%
ATCCTGGAATGAGGTCTACG+AGG + chr2_3:57326568-57326587 Msa0301350:CDS 50.0%
AACCTCGTAGACCTCATTCC+AGG - chr2_3:57326573-57326592 None:intergenic 50.0%
ATGAGGTCTACGAGGTTCAC+CGG + chr2_3:57326576-57326595 Msa0301350:CDS 50.0%
CTTGAGCAAGACCTTCAAGG+CGG - chr2_3:57326796-57326815 None:intergenic 50.0%
GCTTCCTCTGACCCTTGTTA+TGG + chr2_3:57326856-57326875 Msa0301350:intron 50.0%
AGGACAATGCGGAAACCAGA+AGG - chr2_3:57327053-57327072 None:intergenic 50.0%
CAGGCAACAGCTCATGCTAA+CGG + chr2_3:57327249-57327268 Msa0301350:CDS 50.0%
GACCGCTCTCAAAAGGAAAC+TGG - chr2_3:57327320-57327339 None:intergenic 50.0%
GCAGGATAATGTTGCAGCCA+TGG + chr2_3:57327341-57327360 Msa0301350:CDS 50.0%
!! CCAGAAGTGTTAACGCTGGA+TGG - chr2_3:57327426-57327445 None:intergenic 50.0%
CCATCCAGCGTTAACACTTC+TGG + chr2_3:57327423-57327442 Msa0301350:CDS 50.0%
TCCAGCGTTAACACTTCTGG+TGG + chr2_3:57327426-57327445 Msa0301350:CDS 50.0%
!! TCCACCAGAAGTGTTAACGC+TGG - chr2_3:57327430-57327449 None:intergenic 50.0%
!! TAAGTGCTTCTGGAGTGCCA+GGG - chr2_3:57327464-57327483 None:intergenic 50.0%
GGCTCTACAGGATATCACAC+TGG + chr2_3:57327883-57327902 Msa0301350:CDS 50.0%
! GGTTTGCTTGTATGCCAGCT+GGG + chr2_3:57328098-57328117 Msa0301350:CDS 50.0%
GCAGAAGCAGGTTTCACAGC+TGG + chr2_3:57324342-57324361 Msa0301350:CDS 55.0%
! GTCAGCATTTGGAGCTGCTG+GGG - chr2_3:57324571-57324590 None:intergenic 55.0%
! CTGTCAGCATTTGGAGCTGC+TGG - chr2_3:57324573-57324592 None:intergenic 55.0%
TCGATTGGGTCCAGATGCCT+GGG + chr2_3:57324812-57324831 Msa0301350:CDS 55.0%
CTACCTTCATCCCAGGCATC+TGG - chr2_3:57324825-57324844 None:intergenic 55.0%
TTCTCAAGGTGGCAACGGAG+TGG + chr2_3:57325007-57325026 Msa0301350:CDS 55.0%
!! TCACTGTCTGGTTCTGGTGC+TGG + chr2_3:57325555-57325574 Msa0301350:CDS 55.0%
TTCACCCCTCGCAAACTGTG+AGG - chr2_3:57325598-57325617 None:intergenic 55.0%
AGGGGTGAAATGCTCCCTAG+TGG + chr2_3:57325609-57325628 Msa0301350:CDS 55.0%
! TCTGAACTGTGATGGTGCCG+AGG + chr2_3:57326212-57326231 Msa0301350:CDS 55.0%
! CTGAACTGTGATGGTGCCGA+GGG + chr2_3:57326213-57326232 Msa0301350:CDS 55.0%
AGTTCCCTTTCACTCCTCGG+AGG + chr2_3:57326291-57326310 Msa0301350:CDS 55.0%
CGTTTACTGCACCGTGCCAA+TGG - chr2_3:57326365-57326384 None:intergenic 55.0%
!! CTTTCTGAGGGAGCATCGCT+CGG + chr2_3:57326482-57326501 Msa0301350:CDS 55.0%
GTTCCCAGAAGATGCTCCCT+TGG + chr2_3:57327025-57327044 Msa0301350:CDS 55.0%
!! GCACCAAGGGAGCATCTTCT+GGG - chr2_3:57327031-57327050 None:intergenic 55.0%
!! CGGAAACCAGAAGGCACCAA+GGG - chr2_3:57327044-57327063 None:intergenic 55.0%
CGTTAGCATGAGCTGTTGCC+TGG - chr2_3:57327251-57327270 None:intergenic 55.0%
!! TCCTTTTGAGAGCGGTCTGC+AGG + chr2_3:57327323-57327342 Msa0301350:CDS 55.0%
TCCTGCAGACCGCTCTCAAA+AGG - chr2_3:57327327-57327346 None:intergenic 55.0%
CCATGGCACGTCAGTATGTC+CGG + chr2_3:57327358-57327377 Msa0301350:CDS 55.0%
TGTAGTTTCCGCTGTGCAGG+CGG + chr2_3:57327383-57327402 Msa0301350:intron 55.0%
!! AAGTGCTTCTGGAGTGCCAG+GGG - chr2_3:57327463-57327482 None:intergenic 55.0%
!! GTAAGTGCTTCTGGAGTGCC+AGG - chr2_3:57327465-57327484 None:intergenic 55.0%
! GGGTTTGCTTGTATGCCAGC+TGG + chr2_3:57328097-57328116 Msa0301350:CDS 55.0%
GTTGACATGCAGATCCCAGC+TGG - chr2_3:57328115-57328134 None:intergenic 55.0%
CATATGATCAAGCCGTCGCG+TGG + chr2_3:57328152-57328171 Msa0301350:CDS 55.0%
AGCATGCACTTTCCACGCGA+CGG - chr2_3:57328167-57328186 None:intergenic 55.0%
!! ACAGCTGATTCGGGAGTGCC+CGG + chr2_3:57324051-57324070 Msa0301350:CDS 60.0%
!!! GATTCGGGAGTGCCCGGTTT+TGG + chr2_3:57324057-57324076 Msa0301350:CDS 60.0%
GTCGATTGGGTCCAGATGCC+TGG + chr2_3:57324811-57324830 Msa0301350:CDS 60.0%
GGTCCAGATGCCTGGGATGA+AGG + chr2_3:57324819-57324838 Msa0301350:CDS 60.0%
! TAGCCTGGTCCGGATTCGGT+TGG + chr2_3:57324972-57324991 Msa0301350:intron 60.0%
! AGCCTGGTCCGGATTCGGTT+GGG + chr2_3:57324973-57324992 Msa0301350:intron 60.0%
ATCCCAACCGAATCCGGACC+AGG - chr2_3:57324978-57324997 None:intergenic 60.0%
CGAGCAGAAGCCAGCGTCAT+TGG - chr2_3:57325382-57325401 None:intergenic 60.0%
TGGCTTCTGCTCGCGACTTC+TGG + chr2_3:57325389-57325408 Msa0301350:CDS 60.0%
TGTGAGGCGGCTGCAGCATT+AGG - chr2_3:57325582-57325601 None:intergenic 60.0%
AGCCGCCTCACAGTTTGCGA+GGG + chr2_3:57325590-57325609 Msa0301350:CDS 60.0%
ACCCCTCGCAAACTGTGAGG+CGG - chr2_3:57325595-57325614 None:intergenic 60.0%
!! GGAGTGTGCCAGAAGTGCTG+CGG + chr2_3:57325794-57325813 Msa0301350:CDS 60.0%
CGACGTACCTGCTCAACCGT+TGG - chr2_3:57326047-57326066 None:intergenic 60.0%
! GCTGGCTCCTATGGCTATCC+TGG + chr2_3:57326552-57326571 Msa0301350:CDS 60.0%
!! GGCACCAAGGGAGCATCTTC+TGG - chr2_3:57327032-57327051 None:intergenic 60.0%
!! GATGCTCCCTTGGTGCCTTC+TGG + chr2_3:57327035-57327054 Msa0301350:CDS 60.0%
!! GCGGAAACCAGAAGGCACCA+AGG - chr2_3:57327045-57327064 None:intergenic 60.0%
CCGGACATACTGACGTGCCA+TGG - chr2_3:57327361-57327380 None:intergenic 60.0%
GCACAGCGGAAACTACACGC+CGG - chr2_3:57327380-57327399 None:intergenic 60.0%
GCGTGTAGTTTCCGCTGTGC+AGG + chr2_3:57327380-57327399 Msa0301350:intron 60.0%
GGTGGAGCAAAACTCTCCCC+TGG + chr2_3:57327444-57327463 Msa0301350:CDS 60.0%
CCAACATGTCAAGGCCAGCC+TGG - chr2_3:57327850-57327869 None:intergenic 60.0%
!! CCAGGCTGGCCTTGACATGT+TGG + chr2_3:57327847-57327866 Msa0301350:CDS 60.0%
GGAGTGGCAGCTAGAGCCTG+TGG + chr2_3:57325023-57325042 Msa0301350:CDS 65.0%
CAGCCGCCTCACAGTTTGCG+AGG + chr2_3:57325589-57325608 Msa0301350:CDS 65.0%
GCCGCCTCACAGTTTGCGAG+GGG + chr2_3:57325591-57325610 Msa0301350:CDS 65.0%
TAGAGCGGCCGCAGCACTTC+TGG - chr2_3:57325805-57325824 None:intergenic 65.0%
!! TGAGGGAGCATCGCTCGGAG+TGG + chr2_3:57326487-57326506 Msa0301350:CDS 65.0%
!! GAGGGAGCATCGCTCGGAGT+GGG + chr2_3:57326488-57326507 Msa0301350:CDS 65.0%
CGTTGCAACCGCCTGCACAG+CGG - chr2_3:57327394-57327413 None:intergenic 65.0%
CGCTGTGCAGGCGGTTGCAA+CGG + chr2_3:57327392-57327411 Msa0301350:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 57322999 57328499 57322999 ID=Msa0301350;Name=Msa0301350
chr2_3 mRNA 57322999 57328499 57322999 ID=Msa0301350-mRNA-1;Parent=Msa0301350;Name=Msa0301350-mRNA-1;_AED=0.11;_eAED=0.11;_QI=900|0.88|0.84|1|0.88|0.84|19|256|833
chr2_3 exon 57322999 57324125 57322999 ID=Msa0301350-mRNA-1:exon:18492;Parent=Msa0301350-mRNA-1
chr2_3 exon 57324243 57324402 57324243 ID=Msa0301350-mRNA-1:exon:18493;Parent=Msa0301350-mRNA-1
chr2_3 exon 57324567 57324658 57324567 ID=Msa0301350-mRNA-1:exon:18494;Parent=Msa0301350-mRNA-1
chr2_3 exon 57324750 57324840 57324750 ID=Msa0301350-mRNA-1:exon:18495;Parent=Msa0301350-mRNA-1
chr2_3 exon 57324975 57325070 57324975 ID=Msa0301350-mRNA-1:exon:18496;Parent=Msa0301350-mRNA-1
chr2_3 exon 57325179 57325292 57325179 ID=Msa0301350-mRNA-1:exon:18497;Parent=Msa0301350-mRNA-1
chr2_3 exon 57325370 57325453 57325370 ID=Msa0301350-mRNA-1:exon:18498;Parent=Msa0301350-mRNA-1
chr2_3 exon 57325543 57325698 57325543 ID=Msa0301350-mRNA-1:exon:18499;Parent=Msa0301350-mRNA-1
chr2_3 exon 57325790 57325864 57325790 ID=Msa0301350-mRNA-1:exon:18500;Parent=Msa0301350-mRNA-1
chr2_3 exon 57325952 57326058 57325952 ID=Msa0301350-mRNA-1:exon:18501;Parent=Msa0301350-mRNA-1
chr2_3 exon 57326164 57326347 57326164 ID=Msa0301350-mRNA-1:exon:18502;Parent=Msa0301350-mRNA-1
chr2_3 exon 57326456 57326644 57326456 ID=Msa0301350-mRNA-1:exon:18503;Parent=Msa0301350-mRNA-1
chr2_3 exon 57326779 57326853 57326779 ID=Msa0301350-mRNA-1:exon:18504;Parent=Msa0301350-mRNA-1
chr2_3 exon 57326954 57327088 57326954 ID=Msa0301350-mRNA-1:exon:18505;Parent=Msa0301350-mRNA-1
chr2_3 exon 57327183 57327383 57327183 ID=Msa0301350-mRNA-1:exon:18506;Parent=Msa0301350-mRNA-1
chr2_3 exon 57327402 57327514 57327402 ID=Msa0301350-mRNA-1:exon:18507;Parent=Msa0301350-mRNA-1
chr2_3 exon 57327608 57327713 57327608 ID=Msa0301350-mRNA-1:exon:18508;Parent=Msa0301350-mRNA-1
chr2_3 exon 57327821 57327970 57327821 ID=Msa0301350-mRNA-1:exon:18509;Parent=Msa0301350-mRNA-1
chr2_3 exon 57328097 57328499 57328097 ID=Msa0301350-mRNA-1:exon:18510;Parent=Msa0301350-mRNA-1
chr2_3 five_prime_UTR 57322999 57323898 57322999 ID=Msa0301350-mRNA-1:five_prime_utr;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57323899 57324125 57323899 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57324243 57324402 57324243 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57324567 57324658 57324567 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57324750 57324840 57324750 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57324975 57325070 57324975 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57325179 57325292 57325179 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57325370 57325453 57325370 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57325543 57325698 57325543 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57325790 57325864 57325790 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57325952 57326058 57325952 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57326164 57326347 57326164 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57326456 57326644 57326456 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57326779 57326853 57326779 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57326954 57327088 57326954 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57327183 57327383 57327183 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57327402 57327514 57327402 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57327608 57327713 57327608 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57327821 57327970 57327821 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 CDS 57328097 57328243 57328097 ID=Msa0301350-mRNA-1:cds;Parent=Msa0301350-mRNA-1
chr2_3 three_prime_UTR 57328244 57328499 57328244 ID=Msa0301350-mRNA-1:three_prime_utr;Parent=Msa0301350-mRNA-1
Gene Sequence

>Msa0301350

ATGGCTATGGCTGTTGCACAACAACAAAGAGATAACAGCATTGAGAGACACCTTGATTCGTCTGGCAAATATGTGCGGTACACTGCTGAACAGATTGAAGCTTTGGAAAAGGTTTATGTGGAATGCCCTAAGCCTAGTTCATTGAGAAGGCAACAGCTGATTCGGGAGTGCCCGGTTTTGGCCAACATTGAGCCTAAGCAGATCAAGGTTTGGTTTCAGAATAGGAGGTGTAGGGAGAAGCAGAGAAAAGAGGCTTCTCAGCTTCAGAGTGTGAACAGGAAACTTTCTGCGATGAATAAGCTGTTGATGGAGGAAAATGAGAGGCTGCAGAAGCAGGTTTCACAGCTGGTGAATGAGAATGGATTTATGCGCCAGCAATTGCACACTACCCCAGCAGCTCCAAATGCTGACAGTAGTGGCGTTGATTCTGCGGCTGCTGCTCCTATGAATTCATTGAGAGATGCTAATAGCCCTGCTGGATTCCTATCAATTGCGGAGGAGACATTGGCAGAGTTCCTTTCAAAGGCTACAGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATATTTGCCATTTCTCAAGGTGGCAACGGAGTGGCAGCTAGAGCCTGTGGTCTTGTTAGTTTAGAACCTACTAAGATTGTGGAGATCCTAAAAGATCGCCCAACTTGGTATCGTGATTGTCGGAGTTCAGAAGTTTTCACAATGTTCCCAGCTGGAAATGGAGGAACAATTGAACTTGTTTACACACAGACATATGCTCCAATGACGCTGGCTTCTGCTCGCGACTTCTGGACTCTAAGATACACTACAAATTTGGAAAACGGTAGTGTTGTGGTTTGTGAAAGGTCACTGTCTGGTTCTGGTGCTGGTCCTAATGCTGCAGCCGCCTCACAGTTTGCGAGGGGTGAAATGCTCCCTAGTGGTTACTTGATTCGACCATGTGAAGGTGGAGGATCGATCATCCACATTGTAGACCACCTAAACCTGCAGGCATGGAGTGTGCCAGAAGTGCTGCGGCCGCTCTATGAATCGTCGCAAATGGTAGCTCAGAGACTGACAATTGCGGCACTTCGCTATATCAGGCAAGTAGCTCAAGAAACAAGTGGTGAAGTGGTGTATAGCATGGGTCGGCAACCTGCAGTTCTTAGAACTTTTAGCCAACGGTTGAGCAGAGGTTTCAATGACGCTGTCAATGGATTCAATGATGATGGCTGGTCTGTTCTGAACTGTGATGGTGCCGAGGGTGTTACTATTTCAGTGAATTCAATCAAGAATTTGAGTGGCACTTCAAATCCAGCAAGTTCCCTTTCACTCCTCGGAGGAATTGTCTGTGCAAAAGCTTCTATGTTACTCCAAAACACCACTCCTGCTGTTTTAGTTCGCTTTCTGAGGGAGCATCGCTCGGAGTGGGCTGATTTTAGTGTTGATGCCTTTTCTGCTGCATCACTTAAAGCTGGCTCCTATGGCTATCCTGGAATGAGGTCTACGAGGTTCACCGGCAATCAAGCAATCATGCCTCTTGGACATACAATTGAACATGACGAGATGCTAGAAATTATCCGCCTTGAAGGTCTTGCTCAAGATGATTCTTTTGTTTCTAGGGATGTTCATCTCTTACAGTTATGTACTGGAATTGATGAGAATGCTGTGGGGGCTTGTTCCGAGCTCATATTTGCTCCAATTGATGACATGTTCCCAGAAGATGCTCCCTTGGTGCCTTCTGGTTTCCGCATTGTCCTGTTGAATTCTCAACCAGGTGATACAAAGAACACAACAGCAGCAAATCGAACCTTGGATTTGACATCTGGTCTTGAAGTAAGCCAGGCAACAGCTCATGCTAACGGAGATGCATCGTGTCCTAACAATCGATGTGCGTTGACTGTTGCCTTCCAGTTTCCTTTTGAGAGCGGTCTGCAGGATAATGTTGCAGCCATGGCACGTCAGTATGTCCGGCGTGCGGTTGCAACGGCTATATCTCCATCCAGCGTTAACACTTCTGGTGGAGCAAAACTCTCCCCTGGCACTCCAGAAGCACTTACACTAGCTCAATGGATCTGCCAGAGCTATAGTCATTATCTGGGGGCGCAACTGCTGAGATCTGATTCTCTTATTGGTGATATGCTACTGAAACATTTGTGGCATCATCCAGATGCTATTTTATGCTGCTCTTTGAAGCAAGTGCCCGTATTCATCTTTGCTAACCAGGCTGGCCTTGACATGTTGGAAACAACTCTAGTGGCTCTACAGGATATCACACTGGACAAAATATTTGATGAATCTGCACGCAAGAATTTGATTGCATATTTTGCGAAGTTAATGCAGCAGGGGTTTGCTTGTATGCCAGCTGGGATCTGCATGTCAACAATGGGGCGACATGCTTCATATGATCAAGCCGTCGCGTGGAAAGTGCATGCTGAAGACAACAGTGTTCATTGCTTGGCTTTCTCGTTCATTAATTGGTCATTTATATGA
Protein sequence

>Msa0301350

MAMAVAQQQRDNSIERHLDSSGKYVRYTAEQIEALEKVYVECPKPSSLRRQQLIRECPVLANIEPKQIKVWFQNRRCREKQRKEASQLQSVNRKLSAMNKLLMEENERLQKQVSQLVNENGFMRQQLHTTPAAPNADSSGVDSAAAAPMNSLRDANSPAGFLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQGGNGVAARACGLVSLEPTKIVEILKDRPTWYRDCRSSEVFTMFPAGNGGTIELVYTQTYAPMTLASARDFWTLRYTTNLENGSVVVCERSLSGSGAGPNAAAASQFARGEMLPSGYLIRPCEGGGSIIHIVDHLNLQAWSVPEVLRPLYESSQMVAQRLTIAALRYIRQVAQETSGEVVYSMGRQPAVLRTFSQRLSRGFNDAVNGFNDDGWSVLNCDGAEGVTISVNSIKNLSGTSNPASSLSLLGGIVCAKASMLLQNTTPAVLVRFLREHRSEWADFSVDAFSAASLKAGSYGYPGMRSTRFTGNQAIMPLGHTIEHDEMLEIIRLEGLAQDDSFVSRDVHLLQLCTGIDENAVGACSELIFAPIDDMFPEDAPLVPSGFRIVLLNSQPGDTKNTTAANRTLDLTSGLEVSQATAHANGDASCPNNRCALTVAFQFPFESGLQDNVAAMARQYVRRAVATAISPSSVNTSGGAKLSPGTPEALTLAQWICQSYSHYLGAQLLRSDSLIGDMLLKHLWHHPDAILCCSLKQVPVFIFANQAGLDMLETTLVALQDITLDKIFDESARKNLIAYFAKLMQQGFACMPAGICMSTMGRHASYDQAVAWKVHAEDNSVHCLAFSFINWSFI*