Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311450 | XP_003593377.1 | 90.499 | 421 | 36 | 2 | 1 | 419 | 1 | 419 | 0.0 | 669 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311450 | sp|Q9SYA9|STKLD_ARATH | 33.807 | 352 | 173 | 16 | 85 | 417 | 62 | 372 | 1.24e-26 | 113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0311450 | TF | GeBP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311450 | MtrunA17_Chr2g0280431 | 90.499 | 421 | 36 | 2 | 1 | 419 | 1 | 419 | 0.0 | 669 |
| Msa0311450 | MtrunA17_Chr4g0061741 | 54.430 | 158 | 65 | 4 | 233 | 388 | 114 | 266 | 5.46e-39 | 141 |
| Msa0311450 | MtrunA17_Chr3g0113131 | 36.667 | 300 | 150 | 10 | 124 | 405 | 85 | 362 | 1.65e-35 | 134 |
| Msa0311450 | MtrunA17_Chr7g0273821 | 30.719 | 153 | 83 | 4 | 150 | 291 | 68 | 208 | 2.32e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0311450 | AT1G61730.1 | 33.807 | 352 | 173 | 16 | 85 | 417 | 62 | 372 | 1.26e-27 | 113 |
| Msa0311450 | AT4G00390.1 | 32.277 | 347 | 180 | 14 | 70 | 407 | 55 | 355 | 1.32e-24 | 104 |
| Msa0311450 | AT1G11510.1 | 31.818 | 374 | 182 | 17 | 57 | 405 | 14 | 339 | 1.08e-20 | 93.2 |
| Msa0311450 | AT1G11510.2 | 29.945 | 364 | 173 | 14 | 57 | 405 | 14 | 310 | 1.69e-18 | 86.3 |
| Msa0311450 | AT4G25210.1 | 26.979 | 341 | 172 | 12 | 110 | 412 | 63 | 364 | 9.92e-15 | 75.5 |
| Msa0311450 | AT1G66420.1 | 35.821 | 134 | 69 | 4 | 158 | 287 | 53 | 173 | 3.41e-14 | 73.2 |
| Msa0311450 | AT2G01370.1 | 37.500 | 112 | 54 | 3 | 183 | 286 | 66 | 169 | 2.59e-13 | 70.1 |
| Msa0311450 | AT1G44810.1 | 32.117 | 137 | 69 | 3 | 155 | 287 | 93 | 209 | 1.04e-12 | 68.9 |
| Msa0311450 | AT4G01260.1 | 28.723 | 282 | 149 | 8 | 155 | 409 | 57 | 313 | 5.68e-12 | 67.0 |
| Msa0311450 | AT5G14280.1 | 42.105 | 95 | 45 | 3 | 206 | 290 | 63 | 157 | 2.33e-11 | 64.7 |
| Msa0311450 | AT2G25650.1 | 35.000 | 140 | 73 | 6 | 206 | 334 | 67 | 199 | 2.76e-11 | 65.1 |
Find 114 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGCAAGTGGTTTAACTTT+AGG | 0.199493 | 2_4:+6316633 | None:intergenic |
| GATTCAGATTCAGCGGGTTT+AGG | 0.217235 | 2_4:+6316738 | None:intergenic |
| TTTGGGCTTGGACTTGGGTT+TGG | 0.224832 | 2_4:+6316595 | None:intergenic |
| TTGGGCTTGGACTTGGGTTT+GGG | 0.234928 | 2_4:+6316596 | None:intergenic |
| AAGCAAGTGGTTTAACTTTA+GGG | 0.240022 | 2_4:+6316634 | None:intergenic |
| CAAGAAGAAATCAAGCAAAT+AGG | 0.257807 | 2_4:-6315767 | None:intergenic |
| ATTGGGTTTGGGCTTGGACT+TGG | 0.258195 | 2_4:+6316589 | None:intergenic |
| GCACCGGAGTTGATTGGGTT+TGG | 0.265891 | 2_4:+6316577 | None:intergenic |
| CACCGGAGTTGATTGGGTTT+GGG | 0.274267 | 2_4:+6316578 | None:intergenic |
| TTGGAGCAAAATTGCTTCTA+AGG | 0.274708 | 2_4:-6316151 | Msa0311450:CDS |
| ATTCAGATTCAGCGGGTTTA+GGG | 0.293343 | 2_4:+6316739 | None:intergenic |
| AGGATGAATCTTCATCTTCT+TGG | 0.306973 | 2_4:+6316895 | None:intergenic |
| TGAATCGCGCTGAGGTGGTT+AGG | 0.312947 | 2_4:-6315819 | Msa0311450:CDS |
| GTGGGTTCCGATTTCTGTTC+CGG | 0.345211 | 2_4:+6316669 | None:intergenic |
| GCGAGGCGTTTCTTTGGCTT+TGG | 0.347433 | 2_4:+6317002 | None:intergenic |
| GGCACGCTTAGTTCCGGACT+TGG | 0.367669 | 2_4:+6316551 | None:intergenic |
| GTCAGATAGGGTTGAGTTGG+AGG | 0.367989 | 2_4:-6315884 | Msa0311450:CDS |
| TTGGGTTTGGGCTTGGACTT+GGG | 0.368303 | 2_4:+6316590 | None:intergenic |
| TGCTCTCTTATCATGAGCTT+TGG | 0.370081 | 2_4:+6316191 | None:intergenic |
| GCAGACTAGATTGGCATTGC+AGG | 0.370825 | 2_4:-6315794 | Msa0311450:CDS |
| TGGTCGGCACCGGAGTTGAT+TGG | 0.373072 | 2_4:+6316571 | None:intergenic |
| TCAGAATCCGGTTCTGAATC+TGG | 0.376206 | 2_4:-6316711 | Msa0311450:CDS |
| AAGAAGAAATCAAGCAAATA+GGG | 0.379593 | 2_4:-6315766 | None:intergenic |
| ACGAGAGCGAGGCGTTTCTT+TGG | 0.380520 | 2_4:+6316996 | None:intergenic |
| AGTGGTTTAACTTTAGGGTT+AGG | 0.384389 | 2_4:+6316639 | None:intergenic |
| TTCGGCGGCACGCTTAGTTC+CGG | 0.394238 | 2_4:+6316545 | None:intergenic |
| GAGTTGATTGGGTTTGGGCT+TGG | 0.400974 | 2_4:+6316583 | None:intergenic |
| CTTGTGATTCTCAAAGGACT+TGG | 0.403858 | 2_4:-6316369 | Msa0311450:CDS |
| TTCTGAACCGGAACAGAAAT+CGG | 0.410111 | 2_4:-6316676 | Msa0311450:CDS |
| GCGGGTTTAGGGGTAGAGAT+AGG | 0.413172 | 2_4:+6316750 | None:intergenic |
| TCTCTTCAATTGCTGAGCAT+TGG | 0.418880 | 2_4:+6316260 | None:intergenic |
| GAATCGCGCTGAGGTGGTTA+GGG | 0.419146 | 2_4:-6315818 | Msa0311450:CDS |
| GGTCGGCACCGGAGTTGATT+GGG | 0.421876 | 2_4:+6316572 | None:intergenic |
| CTCGTCGGAGGAAGAGGCGG+TGG | 0.434145 | 2_4:+6316962 | None:intergenic |
| GGGGTAGAGATAGGAGTAGA+AGG | 0.435130 | 2_4:+6316759 | None:intergenic |
| ACTCCGGTGCCGACCAAGTC+CGG | 0.443071 | 2_4:-6316564 | Msa0311450:CDS |
| TCTGAATCCGGCTCAGAATC+CGG | 0.447335 | 2_4:-6316723 | Msa0311450:CDS |
| ATCGTTTCCAGTGTTACTTT+CGG | 0.449680 | 2_4:+6316527 | None:intergenic |
| TCGGAGGAAGAGGCGGTGGG+TGG | 0.451878 | 2_4:+6316966 | None:intergenic |
| TAAGAATGAAAGTGGAAAAG+TGG | 0.453012 | 2_4:-6316022 | Msa0311450:CDS |
| TGGTTGACTACTTTGTCTGC+TGG | 0.453399 | 2_4:+6316915 | None:intergenic |
| TTCGGTTCCAGATTCAGAAC+CGG | 0.454128 | 2_4:+6316704 | None:intergenic |
| AACCGAATCTGATTCTGAAC+CGG | 0.455116 | 2_4:-6316688 | Msa0311450:CDS |
| TCCATCTCCTTCTTCTTCTG+AGG | 0.458431 | 2_4:+6316875 | None:intergenic |
| GGAGAGGTGGAAGAAGTTGC+AGG | 0.459564 | 2_4:-6315863 | Msa0311450:CDS |
| TTCCGGTTCAGAATCAGATT+CGG | 0.461387 | 2_4:+6316686 | None:intergenic |
| AAGGAAGCAGCTGCATTTCA+CGG | 0.465241 | 2_4:-6316312 | Msa0311450:CDS |
| AATCACAAAGAGTGCTAAGA+AGG | 0.466107 | 2_4:-6316097 | Msa0311450:CDS |
| TTGATCCTCGTCGGAGGAAG+AGG | 0.466920 | 2_4:+6316956 | None:intergenic |
| ATAGTTACTAAGAATGAAAG+TGG | 0.473928 | 2_4:-6316030 | Msa0311450:CDS |
| GGAGTCAGATAGGGTTGAGT+TGG | 0.474759 | 2_4:-6315887 | Msa0311450:CDS |
| TTGTGATTCTCAAAGGACTT+GGG | 0.485931 | 2_4:-6316368 | Msa0311450:CDS |
| GGGTATAGCTGTGCTGGATA+AGG | 0.490129 | 2_4:-6315941 | Msa0311450:CDS |
| GGGTTGAGTTGGAGGAGAGG+TGG | 0.490174 | 2_4:-6315876 | Msa0311450:CDS |
| GAGATAGGAGTAGAAGGAGG+AGG | 0.494629 | 2_4:+6316765 | None:intergenic |
| GGTTTAACTTTAGGGTTAGG+AGG | 0.498539 | 2_4:+6316642 | None:intergenic |
| AAAACCACCGGTGGTGGTGG+TGG | 0.499529 | 2_4:-6316486 | Msa0311450:CDS |
| TTCAGAACCGGATTCTGAGC+CGG | 0.501712 | 2_4:+6316716 | None:intergenic |
| CGCTTAGTTCCGGACTTGGT+CGG | 0.508280 | 2_4:+6316555 | None:intergenic |
| TCTAAGGAAGCTGAAGAAAA+CGG | 0.508657 | 2_4:-6316135 | Msa0311450:CDS |
| GTTCCGGACTTGGTCGGCAC+CGG | 0.509635 | 2_4:+6316561 | None:intergenic |
| AAATGGTGGTTCTGCTAGGA+AGG | 0.513798 | 2_4:-6316061 | Msa0311450:CDS |
| AAGAAGAAAACCACCGGTGG+TGG | 0.515031 | 2_4:-6316492 | Msa0311450:CDS |
| GAAGTTGCAGGCTGCCGAGA+TGG | 0.515486 | 2_4:-6315851 | Msa0311450:CDS |
| ATAGGGTTGAGTTGGAGGAG+AGG | 0.516403 | 2_4:-6315879 | Msa0311450:CDS |
| GGTTAGGGAGCAGACTAGAT+TGG | 0.517395 | 2_4:-6315803 | Msa0311450:CDS |
| AGATAGGAGTAGAAGGAGGA+GGG | 0.520024 | 2_4:+6316766 | None:intergenic |
| GAAGGAGATGGAGAAGAAGA+AGG | 0.521213 | 2_4:-6316864 | Msa0311450:CDS |
| TGTGATTCTCAAAGGACTTG+GGG | 0.521463 | 2_4:-6316367 | Msa0311450:CDS |
| AAACCCGCTGAATCTGAATC+CGG | 0.523805 | 2_4:-6316735 | Msa0311450:CDS |
| CGGAGGAAGAGGCGGTGGGT+GGG | 0.524036 | 2_4:+6316967 | None:intergenic |
| GTTAAATTTGATGAGGCTGC+GGG | 0.528643 | 2_4:-6315961 | Msa0311450:CDS |
| AAGAAAACCACCGGTGGTGG+TGG | 0.529398 | 2_4:-6316489 | Msa0311450:CDS |
| TGCTCAGCAATTGAAGAGAA+AGG | 0.529680 | 2_4:-6316256 | Msa0311450:CDS |
| TTAACTTTAGGGTTAGGAGG+TGG | 0.529972 | 2_4:+6316645 | None:intergenic |
| GGCTGCGGGTATAGCTGTGC+TGG | 0.534970 | 2_4:-6315947 | Msa0311450:CDS |
| GGTTAAATTTGATGAGGCTG+CGG | 0.538193 | 2_4:-6315962 | Msa0311450:CDS |
| CAATTGAAGAGAAAGGTTCG+TGG | 0.552666 | 2_4:-6316249 | Msa0311450:CDS |
| TTAGGGTTAGGAGGTGGAGT+GGG | 0.559530 | 2_4:+6316651 | None:intergenic |
| TGATGAGAATGAGGCGGAGG+AGG | 0.559810 | 2_4:-6316457 | Msa0311450:CDS |
| ATCAGAACCACCACCACCAC+CGG | 0.561973 | 2_4:+6316479 | None:intergenic |
| GATTCATCCTCAGAAGAAGA+AGG | 0.562296 | 2_4:-6316882 | Msa0311450:CDS |
| AATGCAGCTGCTTCCTTCAG+CGG | 0.564243 | 2_4:+6316318 | None:intergenic |
| GAGCCGGATTCAGATTCAGC+GGG | 0.569467 | 2_4:+6316732 | None:intergenic |
| TTTAGGGTTAGGAGGTGGAG+TGG | 0.572126 | 2_4:+6316650 | None:intergenic |
| GACGAGCTTGTGATTCTCAA+AGG | 0.573688 | 2_4:-6316375 | Msa0311450:CDS |
| AAAAGCGGTTTGGAATTGAT+GGG | 0.574547 | 2_4:-6315910 | Msa0311450:CDS |
| TGATGATGAGAATGAGGCGG+AGG | 0.577141 | 2_4:-6316460 | Msa0311450:CDS |
| TCCTCAGAAGAAGAAGGAGA+TGG | 0.578512 | 2_4:-6316876 | Msa0311450:CDS |
| TTCATGGGCTTTGAAGCAAG+TGG | 0.579960 | 2_4:+6316621 | None:intergenic |
| GAGGAGGATGTGAAATTGAC+TGG | 0.583042 | 2_4:-6316441 | Msa0311450:CDS |
| TCGTCGGAGGAAGAGGCGGT+GGG | 0.588753 | 2_4:+6316963 | None:intergenic |
| TGAAGGTGGTTGATCCTCGT+CGG | 0.589745 | 2_4:+6316947 | None:intergenic |
| GAAAGTGGAAAAGTGGAAAG+TGG | 0.593025 | 2_4:-6316015 | Msa0311450:CDS |
| ATCCTCGTCGGAGGAAGAGG+CGG | 0.601599 | 2_4:+6316959 | None:intergenic |
| CGTGCCGCCGAAAGTAACAC+TGG | 0.604597 | 2_4:-6316534 | Msa0311450:CDS |
| CACCGCCTCTTCCTCCGACG+AGG | 0.604984 | 2_4:-6316961 | Msa0311450:CDS |
| AGCCCAAACCCAATCAACTC+CGG | 0.609841 | 2_4:-6316580 | Msa0311450:CDS |
| GACTGGAAAGGATCCGCTGA+AGG | 0.611489 | 2_4:-6316331 | Msa0311450:CDS |
| GGAAAAGTGGAAAGTGGTGT+TGG | 0.619417 | 2_4:-6316009 | Msa0311450:CDS |
| AAAGCGGTTTGGAATTGATG+GGG | 0.621162 | 2_4:-6315909 | Msa0311450:CDS |
| GTGGGTCGTCGACGAGAGCG+AGG | 0.630460 | 2_4:+6316985 | None:intergenic |
| TGGTTCTGATGATGAGAATG+AGG | 0.631876 | 2_4:-6316466 | Msa0311450:CDS |
| CGTTCCAAGAAGAAAACCAC+CGG | 0.642479 | 2_4:-6316498 | Msa0311450:CDS |
| GTTTCCAGTGTTACTTTCGG+CGG | 0.643844 | 2_4:+6316530 | None:intergenic |
| TGAGCCGGATTCAGATTCAG+CGG | 0.650032 | 2_4:+6316731 | None:intergenic |
| TTCAGATTCAGCGGGTTTAG+GGG | 0.652803 | 2_4:+6316740 | None:intergenic |
| GTAGAGATAGGAGTAGAAGG+AGG | 0.653610 | 2_4:+6316762 | None:intergenic |
| CGAACTGGTTAAATTTGATG+AGG | 0.653994 | 2_4:-6315968 | Msa0311450:CDS |
| AGGTGGTTGATCCTCGTCGG+AGG | 0.667833 | 2_4:+6316950 | None:intergenic |
| AAGCGGTTTGGAATTGATGG+GGG | 0.669970 | 2_4:-6315908 | Msa0311450:CDS |
| GAAGAAATCGATGAAAGCTG+AGG | 0.677405 | 2_4:-6316283 | Msa0311450:CDS |
| TCCAAGAAGAAAACCACCGG+TGG | 0.717568 | 2_4:-6316495 | Msa0311450:CDS |
| TTCTGATGATGAGAATGAGG+CGG | 0.722855 | 2_4:-6316463 | Msa0311450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATAGTTACTAAGAATGAAAG+TGG | - | chr2_4:6316746-6316765 | Msa0311450:CDS | 25.0% |
| ! | ATAGTTACTAAGAATGAAAG+TGG | - | chr2_4:6316746-6316765 | Msa0311450:CDS | 25.0% |
| ! | AAGCAAGTGGTTTAACTTTA+GGG | + | chr2_4:6316145-6316164 | None:intergenic | 30.0% |
| !! | CATTTGATCTTTTCAAGGTT+TGG | - | chr2_4:6316606-6316625 | Msa0311450:CDS | 30.0% |
| TAAGAATGAAAGTGGAAAAG+TGG | - | chr2_4:6316754-6316773 | Msa0311450:CDS | 30.0% | |
| ATTCAAAAACACTTCCATCT+CGG | + | chr2_4:6316942-6316961 | None:intergenic | 30.0% | |
| ! | AAGCAAGTGGTTTAACTTTA+GGG | + | chr2_4:6316145-6316164 | None:intergenic | 30.0% |
| !! | CATTTGATCTTTTCAAGGTT+TGG | - | chr2_4:6316606-6316625 | Msa0311450:CDS | 30.0% |
| TAAGAATGAAAGTGGAAAAG+TGG | - | chr2_4:6316754-6316773 | Msa0311450:CDS | 30.0% | |
| ATTCAAAAACACTTCCATCT+CGG | + | chr2_4:6316942-6316961 | None:intergenic | 30.0% | |
| !!! | TACTTTGTCTGCTGGTTTTT+GGG | + | chr2_4:6315856-6315875 | None:intergenic | 35.0% |
| AGGATGAATCTTCATCTTCT+TGG | + | chr2_4:6315884-6315903 | None:intergenic | 35.0% | |
| !! | AGTGGTTTAACTTTAGGGTT+AGG | + | chr2_4:6316140-6316159 | None:intergenic | 35.0% |
| ! | GAAGCAAGTGGTTTAACTTT+AGG | + | chr2_4:6316146-6316165 | None:intergenic | 35.0% |
| !! | ATCGTTTCCAGTGTTACTTT+CGG | + | chr2_4:6316252-6316271 | None:intergenic | 35.0% |
| TTGTGATTCTCAAAGGACTT+GGG | - | chr2_4:6316408-6316427 | Msa0311450:CDS | 35.0% | |
| !!! | GAGAGCATTTGATCTTTTCA+AGG | - | chr2_4:6316601-6316620 | Msa0311450:CDS | 35.0% |
| TTGGAGCAAAATTGCTTCTA+AGG | - | chr2_4:6316625-6316644 | Msa0311450:CDS | 35.0% | |
| TCTAAGGAAGCTGAAGAAAA+CGG | - | chr2_4:6316641-6316660 | Msa0311450:CDS | 35.0% | |
| !! | AATCACAAAGAGTGCTAAGA+AGG | - | chr2_4:6316679-6316698 | Msa0311450:CDS | 35.0% |
| AAGGAAGCTCCTGTTAAAAA+TGG | - | chr2_4:6316698-6316717 | Msa0311450:CDS | 35.0% | |
| ! | TTAAAAATGGTGGTTCTGCT+AGG | - | chr2_4:6316711-6316730 | Msa0311450:CDS | 35.0% |
| CGAACTGGTTAAATTTGATG+AGG | - | chr2_4:6316808-6316827 | Msa0311450:CDS | 35.0% | |
| ! | AAAAAGCGGTTTGGAATTGA+TGG | - | chr2_4:6316865-6316884 | Msa0311450:CDS | 35.0% |
| ! | AAAAGCGGTTTGGAATTGAT+GGG | - | chr2_4:6316866-6316885 | Msa0311450:CDS | 35.0% |
| !!! | TACTTTGTCTGCTGGTTTTT+GGG | + | chr2_4:6315856-6315875 | None:intergenic | 35.0% |
| AGGATGAATCTTCATCTTCT+TGG | + | chr2_4:6315884-6315903 | None:intergenic | 35.0% | |
| !! | AGTGGTTTAACTTTAGGGTT+AGG | + | chr2_4:6316140-6316159 | None:intergenic | 35.0% |
| ! | GAAGCAAGTGGTTTAACTTT+AGG | + | chr2_4:6316146-6316165 | None:intergenic | 35.0% |
| !! | ATCGTTTCCAGTGTTACTTT+CGG | + | chr2_4:6316252-6316271 | None:intergenic | 35.0% |
| TTGTGATTCTCAAAGGACTT+GGG | - | chr2_4:6316408-6316427 | Msa0311450:CDS | 35.0% | |
| !!! | GAGAGCATTTGATCTTTTCA+AGG | - | chr2_4:6316601-6316620 | Msa0311450:CDS | 35.0% |
| TTGGAGCAAAATTGCTTCTA+AGG | - | chr2_4:6316625-6316644 | Msa0311450:CDS | 35.0% | |
| TCTAAGGAAGCTGAAGAAAA+CGG | - | chr2_4:6316641-6316660 | Msa0311450:CDS | 35.0% | |
| !! | AATCACAAAGAGTGCTAAGA+AGG | - | chr2_4:6316679-6316698 | Msa0311450:CDS | 35.0% |
| AAGGAAGCTCCTGTTAAAAA+TGG | - | chr2_4:6316698-6316717 | Msa0311450:CDS | 35.0% | |
| ! | TTAAAAATGGTGGTTCTGCT+AGG | - | chr2_4:6316711-6316730 | Msa0311450:CDS | 35.0% |
| CGAACTGGTTAAATTTGATG+AGG | - | chr2_4:6316808-6316827 | Msa0311450:CDS | 35.0% | |
| ! | AAAAAGCGGTTTGGAATTGA+TGG | - | chr2_4:6316865-6316884 | Msa0311450:CDS | 35.0% |
| ! | AAAAGCGGTTTGGAATTGAT+GGG | - | chr2_4:6316866-6316885 | Msa0311450:CDS | 35.0% |
| !!! | CTACTTTGTCTGCTGGTTTT+TGG | + | chr2_4:6315857-6315876 | None:intergenic | 40.0% |
| GATTCATCCTCAGAAGAAGA+AGG | - | chr2_4:6315894-6315913 | Msa0311450:CDS | 40.0% | |
| !!! | GCGGGTTTTGAATCTTTTGA+AGG | + | chr2_4:6315981-6316000 | None:intergenic | 40.0% |
| ! | ATTCAGATTCAGCGGGTTTA+GGG | + | chr2_4:6316040-6316059 | None:intergenic | 40.0% |
| AACCGAATCTGATTCTGAAC+CGG | - | chr2_4:6316088-6316107 | Msa0311450:CDS | 40.0% | |
| TTCCGGTTCAGAATCAGATT+CGG | + | chr2_4:6316093-6316112 | None:intergenic | 40.0% | |
| TTCTGAACCGGAACAGAAAT+CGG | - | chr2_4:6316100-6316119 | Msa0311450:CDS | 40.0% | |
| !! | TTAACTTTAGGGTTAGGAGG+TGG | + | chr2_4:6316134-6316153 | None:intergenic | 40.0% |
| !! | GGTTTAACTTTAGGGTTAGG+AGG | + | chr2_4:6316137-6316156 | None:intergenic | 40.0% |
| !! | ACTTGGGTTTGGGTTTTCAT+GGG | + | chr2_4:6316173-6316192 | None:intergenic | 40.0% |
| !! | TGGTTCTGATGATGAGAATG+AGG | - | chr2_4:6316310-6316329 | Msa0311450:CDS | 40.0% |
| ! | TTCTGATGATGAGAATGAGG+CGG | - | chr2_4:6316313-6316332 | Msa0311450:CDS | 40.0% |
| CTTGTGATTCTCAAAGGACT+TGG | - | chr2_4:6316407-6316426 | Msa0311450:CDS | 40.0% | |
| TGTGATTCTCAAAGGACTTG+GGG | - | chr2_4:6316409-6316428 | Msa0311450:CDS | 40.0% | |
| GAAGAAATCGATGAAAGCTG+AGG | - | chr2_4:6316493-6316512 | Msa0311450:CDS | 40.0% | |
| TCTCTTCAATTGCTGAGCAT+TGG | + | chr2_4:6316519-6316538 | None:intergenic | 40.0% | |
| TGCTCAGCAATTGAAGAGAA+AGG | - | chr2_4:6316520-6316539 | Msa0311450:CDS | 40.0% | |
| CAATTGAAGAGAAAGGTTCG+TGG | - | chr2_4:6316527-6316546 | Msa0311450:CDS | 40.0% | |
| TGCTCTCTTATCATGAGCTT+TGG | + | chr2_4:6316588-6316607 | None:intergenic | 40.0% | |
| GAAGCTCCTGTTAAAAATGG+TGG | - | chr2_4:6316701-6316720 | Msa0311450:CDS | 40.0% | |
| !! | GCAGAACCACCATTTTTAAC+AGG | + | chr2_4:6316710-6316729 | None:intergenic | 40.0% |
| GAAAGTGGAAAAGTGGAAAG+TGG | - | chr2_4:6316761-6316780 | Msa0311450:CDS | 40.0% | |
| ! | GAGTTTCATTTTGAGCGAAC+TGG | - | chr2_4:6316793-6316812 | Msa0311450:CDS | 40.0% |
| GGTTAAATTTGATGAGGCTG+CGG | - | chr2_4:6316814-6316833 | Msa0311450:CDS | 40.0% | |
| GTTAAATTTGATGAGGCTGC+GGG | - | chr2_4:6316815-6316834 | Msa0311450:CDS | 40.0% | |
| GATAAGGATGCTGCAAAAAG+CGG | - | chr2_4:6316851-6316870 | Msa0311450:CDS | 40.0% | |
| ! | AAAGCGGTTTGGAATTGATG+GGG | - | chr2_4:6316867-6316886 | Msa0311450:CDS | 40.0% |
| !!! | CTACTTTGTCTGCTGGTTTT+TGG | + | chr2_4:6315857-6315876 | None:intergenic | 40.0% |
| GATTCATCCTCAGAAGAAGA+AGG | - | chr2_4:6315894-6315913 | Msa0311450:CDS | 40.0% | |
| !!! | GCGGGTTTTGAATCTTTTGA+AGG | + | chr2_4:6315981-6316000 | None:intergenic | 40.0% |
| ! | ATTCAGATTCAGCGGGTTTA+GGG | + | chr2_4:6316040-6316059 | None:intergenic | 40.0% |
| AACCGAATCTGATTCTGAAC+CGG | - | chr2_4:6316088-6316107 | Msa0311450:CDS | 40.0% | |
| TTCCGGTTCAGAATCAGATT+CGG | + | chr2_4:6316093-6316112 | None:intergenic | 40.0% | |
| TTCTGAACCGGAACAGAAAT+CGG | - | chr2_4:6316100-6316119 | Msa0311450:CDS | 40.0% | |
| !! | TTAACTTTAGGGTTAGGAGG+TGG | + | chr2_4:6316134-6316153 | None:intergenic | 40.0% |
| !! | GGTTTAACTTTAGGGTTAGG+AGG | + | chr2_4:6316137-6316156 | None:intergenic | 40.0% |
| !! | ACTTGGGTTTGGGTTTTCAT+GGG | + | chr2_4:6316173-6316192 | None:intergenic | 40.0% |
| !! | TGGTTCTGATGATGAGAATG+AGG | - | chr2_4:6316310-6316329 | Msa0311450:CDS | 40.0% |
| ! | TTCTGATGATGAGAATGAGG+CGG | - | chr2_4:6316313-6316332 | Msa0311450:CDS | 40.0% |
| CTTGTGATTCTCAAAGGACT+TGG | - | chr2_4:6316407-6316426 | Msa0311450:CDS | 40.0% | |
| TGTGATTCTCAAAGGACTTG+GGG | - | chr2_4:6316409-6316428 | Msa0311450:CDS | 40.0% | |
| GAAGAAATCGATGAAAGCTG+AGG | - | chr2_4:6316493-6316512 | Msa0311450:CDS | 40.0% | |
| TCTCTTCAATTGCTGAGCAT+TGG | + | chr2_4:6316519-6316538 | None:intergenic | 40.0% | |
| TGCTCAGCAATTGAAGAGAA+AGG | - | chr2_4:6316520-6316539 | Msa0311450:CDS | 40.0% | |
| CAATTGAAGAGAAAGGTTCG+TGG | - | chr2_4:6316527-6316546 | Msa0311450:CDS | 40.0% | |
| TGCTCTCTTATCATGAGCTT+TGG | + | chr2_4:6316588-6316607 | None:intergenic | 40.0% | |
| GAAGCTCCTGTTAAAAATGG+TGG | - | chr2_4:6316701-6316720 | Msa0311450:CDS | 40.0% | |
| !! | GCAGAACCACCATTTTTAAC+AGG | + | chr2_4:6316710-6316729 | None:intergenic | 40.0% |
| GAAAGTGGAAAAGTGGAAAG+TGG | - | chr2_4:6316761-6316780 | Msa0311450:CDS | 40.0% | |
| ! | GAGTTTCATTTTGAGCGAAC+TGG | - | chr2_4:6316793-6316812 | Msa0311450:CDS | 40.0% |
| GGTTAAATTTGATGAGGCTG+CGG | - | chr2_4:6316814-6316833 | Msa0311450:CDS | 40.0% | |
| GTTAAATTTGATGAGGCTGC+GGG | - | chr2_4:6316815-6316834 | Msa0311450:CDS | 40.0% | |
| GATAAGGATGCTGCAAAAAG+CGG | - | chr2_4:6316851-6316870 | Msa0311450:CDS | 40.0% | |
| ! | AAAGCGGTTTGGAATTGATG+GGG | - | chr2_4:6316867-6316886 | Msa0311450:CDS | 40.0% |
| !!! | TCTGCTGGTTTTTGGGTTGA+AGG | + | chr2_4:6315849-6315868 | None:intergenic | 45.0% |
| TGGTTGACTACTTTGTCTGC+TGG | + | chr2_4:6315864-6315883 | None:intergenic | 45.0% | |
| TCCTCAGAAGAAGAAGGAGA+TGG | - | chr2_4:6315900-6315919 | Msa0311450:CDS | 45.0% | |
| TCCATCTCCTTCTTCTTCTG+AGG | + | chr2_4:6315904-6315923 | None:intergenic | 45.0% | |
| GAAGGAGATGGAGAAGAAGA+AGG | - | chr2_4:6315912-6315931 | Msa0311450:CDS | 45.0% | |
| ! | AGTAGAAGGAGGAGGGTTTT+TGG | + | chr2_4:6316006-6316025 | None:intergenic | 45.0% |
| AGATAGGAGTAGAAGGAGGA+GGG | + | chr2_4:6316013-6316032 | None:intergenic | 45.0% | |
| GTAGAGATAGGAGTAGAAGG+AGG | + | chr2_4:6316017-6316036 | None:intergenic | 45.0% | |
| ! | TTCAGATTCAGCGGGTTTAG+GGG | + | chr2_4:6316039-6316058 | None:intergenic | 45.0% |
| ! | GATTCAGATTCAGCGGGTTT+AGG | + | chr2_4:6316041-6316060 | None:intergenic | 45.0% |
| AAACCCGCTGAATCTGAATC+CGG | - | chr2_4:6316041-6316060 | Msa0311450:CDS | 45.0% | |
| !! | TCAGAATCCGGTTCTGAATC+TGG | - | chr2_4:6316065-6316084 | Msa0311450:CDS | 45.0% |
| TTCGGTTCCAGATTCAGAAC+CGG | + | chr2_4:6316075-6316094 | None:intergenic | 45.0% | |
| !! | TTCATGGGCTTTGAAGCAAG+TGG | + | chr2_4:6316158-6316177 | None:intergenic | 45.0% |
| !! | GACTTGGGTTTGGGTTTTCA+TGG | + | chr2_4:6316174-6316193 | None:intergenic | 45.0% |
| !! | GTTTCCAGTGTTACTTTCGG+CGG | + | chr2_4:6316249-6316268 | None:intergenic | 45.0% |
| CGTTCCAAGAAGAAAACCAC+CGG | - | chr2_4:6316278-6316297 | Msa0311450:CDS | 45.0% | |
| GAGGAGGATGTGAAATTGAC+TGG | - | chr2_4:6316335-6316354 | Msa0311450:CDS | 45.0% | |
| GACGAGCTTGTGATTCTCAA+AGG | - | chr2_4:6316401-6316420 | Msa0311450:CDS | 45.0% | |
| ! | CAAAGGACTTGGGGATTTTG+TGG | - | chr2_4:6316418-6316437 | Msa0311450:CDS | 45.0% |
| ! | TTTTGTGGCGAAGACTGGAA+AGG | - | chr2_4:6316433-6316452 | Msa0311450:CDS | 45.0% |
| AAGGAAGCAGCTGCATTTCA+CGG | - | chr2_4:6316464-6316483 | Msa0311450:CDS | 45.0% | |
| ! | AAATGGTGGTTCTGCTAGGA+AGG | - | chr2_4:6316715-6316734 | Msa0311450:CDS | 45.0% |
| GGAAAAGTGGAAAGTGGTGT+TGG | - | chr2_4:6316767-6316786 | Msa0311450:CDS | 45.0% | |
| ! | AAGCGGTTTGGAATTGATGG+GGG | - | chr2_4:6316868-6316887 | Msa0311450:CDS | 45.0% |
| AATTGATGGGGGAGTCAGAT+AGG | - | chr2_4:6316879-6316898 | Msa0311450:CDS | 45.0% | |
| ATTGATGGGGGAGTCAGATA+GGG | - | chr2_4:6316880-6316899 | Msa0311450:CDS | 45.0% | |
| !! | AGTGTTTTTGAATCGCGCTG+AGG | - | chr2_4:6316949-6316968 | Msa0311450:CDS | 45.0% |
| !!! | TCTGCTGGTTTTTGGGTTGA+AGG | + | chr2_4:6315849-6315868 | None:intergenic | 45.0% |
| TGGTTGACTACTTTGTCTGC+TGG | + | chr2_4:6315864-6315883 | None:intergenic | 45.0% | |
| TCCTCAGAAGAAGAAGGAGA+TGG | - | chr2_4:6315900-6315919 | Msa0311450:CDS | 45.0% | |
| TCCATCTCCTTCTTCTTCTG+AGG | + | chr2_4:6315904-6315923 | None:intergenic | 45.0% | |
| GAAGGAGATGGAGAAGAAGA+AGG | - | chr2_4:6315912-6315931 | Msa0311450:CDS | 45.0% | |
| ! | AGTAGAAGGAGGAGGGTTTT+TGG | + | chr2_4:6316006-6316025 | None:intergenic | 45.0% |
| AGATAGGAGTAGAAGGAGGA+GGG | + | chr2_4:6316013-6316032 | None:intergenic | 45.0% | |
| GTAGAGATAGGAGTAGAAGG+AGG | + | chr2_4:6316017-6316036 | None:intergenic | 45.0% | |
| ! | TTCAGATTCAGCGGGTTTAG+GGG | + | chr2_4:6316039-6316058 | None:intergenic | 45.0% |
| ! | GATTCAGATTCAGCGGGTTT+AGG | + | chr2_4:6316041-6316060 | None:intergenic | 45.0% |
| AAACCCGCTGAATCTGAATC+CGG | - | chr2_4:6316041-6316060 | Msa0311450:CDS | 45.0% | |
| !! | TCAGAATCCGGTTCTGAATC+TGG | - | chr2_4:6316065-6316084 | Msa0311450:CDS | 45.0% |
| TTCGGTTCCAGATTCAGAAC+CGG | + | chr2_4:6316075-6316094 | None:intergenic | 45.0% | |
| !! | TTCATGGGCTTTGAAGCAAG+TGG | + | chr2_4:6316158-6316177 | None:intergenic | 45.0% |
| !! | GACTTGGGTTTGGGTTTTCA+TGG | + | chr2_4:6316174-6316193 | None:intergenic | 45.0% |
| !! | GTTTCCAGTGTTACTTTCGG+CGG | + | chr2_4:6316249-6316268 | None:intergenic | 45.0% |
| CGTTCCAAGAAGAAAACCAC+CGG | - | chr2_4:6316278-6316297 | Msa0311450:CDS | 45.0% | |
| GAGGAGGATGTGAAATTGAC+TGG | - | chr2_4:6316335-6316354 | Msa0311450:CDS | 45.0% | |
| GACGAGCTTGTGATTCTCAA+AGG | - | chr2_4:6316401-6316420 | Msa0311450:CDS | 45.0% | |
| ! | CAAAGGACTTGGGGATTTTG+TGG | - | chr2_4:6316418-6316437 | Msa0311450:CDS | 45.0% |
| ! | TTTTGTGGCGAAGACTGGAA+AGG | - | chr2_4:6316433-6316452 | Msa0311450:CDS | 45.0% |
| AAGGAAGCAGCTGCATTTCA+CGG | - | chr2_4:6316464-6316483 | Msa0311450:CDS | 45.0% | |
| ! | AAATGGTGGTTCTGCTAGGA+AGG | - | chr2_4:6316715-6316734 | Msa0311450:CDS | 45.0% |
| GGAAAAGTGGAAAGTGGTGT+TGG | - | chr2_4:6316767-6316786 | Msa0311450:CDS | 45.0% | |
| ! | AAGCGGTTTGGAATTGATGG+GGG | - | chr2_4:6316868-6316887 | Msa0311450:CDS | 45.0% |
| AATTGATGGGGGAGTCAGAT+AGG | - | chr2_4:6316879-6316898 | Msa0311450:CDS | 45.0% | |
| ATTGATGGGGGAGTCAGATA+GGG | - | chr2_4:6316880-6316899 | Msa0311450:CDS | 45.0% | |
| !! | AGTGTTTTTGAATCGCGCTG+AGG | - | chr2_4:6316949-6316968 | Msa0311450:CDS | 45.0% |
| TGAAGGTGGTTGATCCTCGT+CGG | + | chr2_4:6315832-6315851 | None:intergenic | 50.0% | |
| !!! | GCTGGTTTTTGGGTTGAAGG+TGG | + | chr2_4:6315846-6315865 | None:intergenic | 50.0% |
| !! | AGGAGGAGGGTTTTTGGAAG+CGG | + | chr2_4:6316000-6316019 | None:intergenic | 50.0% |
| GAGATAGGAGTAGAAGGAGG+AGG | + | chr2_4:6316014-6316033 | None:intergenic | 50.0% | |
| GGGGTAGAGATAGGAGTAGA+AGG | + | chr2_4:6316020-6316039 | None:intergenic | 50.0% | |
| TGAGCCGGATTCAGATTCAG+CGG | + | chr2_4:6316048-6316067 | None:intergenic | 50.0% | |
| TCTGAATCCGGCTCAGAATC+CGG | - | chr2_4:6316053-6316072 | Msa0311450:CDS | 50.0% | |
| TTCAGAACCGGATTCTGAGC+CGG | + | chr2_4:6316063-6316082 | None:intergenic | 50.0% | |
| GTGGGTTCCGATTTCTGTTC+CGG | + | chr2_4:6316110-6316129 | None:intergenic | 50.0% | |
| TTAGGGTTAGGAGGTGGAGT+GGG | + | chr2_4:6316128-6316147 | None:intergenic | 50.0% | |
| ! | TTTAGGGTTAGGAGGTGGAG+TGG | + | chr2_4:6316129-6316148 | None:intergenic | 50.0% |
| TTGGGCTTGGACTTGGGTTT+GGG | + | chr2_4:6316183-6316202 | None:intergenic | 50.0% | |
| TTTGGGCTTGGACTTGGGTT+TGG | + | chr2_4:6316184-6316203 | None:intergenic | 50.0% | |
| TTGGGTTTGGGCTTGGACTT+GGG | + | chr2_4:6316189-6316208 | None:intergenic | 50.0% | |
| ATTGGGTTTGGGCTTGGACT+TGG | + | chr2_4:6316190-6316209 | None:intergenic | 50.0% | |
| ! | GAGTTGATTGGGTTTGGGCT+TGG | + | chr2_4:6316196-6316215 | None:intergenic | 50.0% |
| AGCCCAAACCCAATCAACTC+CGG | - | chr2_4:6316196-6316215 | Msa0311450:CDS | 50.0% | |
| ! | CACCGGAGTTGATTGGGTTT+GGG | + | chr2_4:6316201-6316220 | None:intergenic | 50.0% |
| TCCAAGAAGAAAACCACCGG+TGG | - | chr2_4:6316281-6316300 | Msa0311450:CDS | 50.0% | |
| ! | ACCACCGGTGGTTTTCTTCT+TGG | + | chr2_4:6316285-6316304 | None:intergenic | 50.0% |
| AAGAAGAAAACCACCGGTGG+TGG | - | chr2_4:6316284-6316303 | Msa0311450:CDS | 50.0% | |
| ! | TGATGATGAGAATGAGGCGG+AGG | - | chr2_4:6316316-6316335 | Msa0311450:CDS | 50.0% |
| AATGCAGCTGCTTCCTTCAG+CGG | + | chr2_4:6316461-6316480 | None:intergenic | 50.0% | |
| GGGTATAGCTGTGCTGGATA+AGG | - | chr2_4:6316835-6316854 | Msa0311450:CDS | 50.0% | |
| GGATGCTGCAAAAAGCGGTT+TGG | - | chr2_4:6316856-6316875 | Msa0311450:CDS | 50.0% | |
| GGAGTCAGATAGGGTTGAGT+TGG | - | chr2_4:6316889-6316908 | Msa0311450:CDS | 50.0% | |
| !! | GTCAGATAGGGTTGAGTTGG+AGG | - | chr2_4:6316892-6316911 | Msa0311450:CDS | 50.0% |
| !! | ATAGGGTTGAGTTGGAGGAG+AGG | - | chr2_4:6316897-6316916 | Msa0311450:CDS | 50.0% |
| ! | GTTTTTGAATCGCGCTGAGG+TGG | - | chr2_4:6316952-6316971 | Msa0311450:CDS | 50.0% |
| GGTTAGGGAGCAGACTAGAT+TGG | - | chr2_4:6316973-6316992 | Msa0311450:CDS | 50.0% | |
| GCAGACTAGATTGGCATTGC+AGG | - | chr2_4:6316982-6317001 | Msa0311450:CDS | 50.0% | |
| TGAAGGTGGTTGATCCTCGT+CGG | + | chr2_4:6315832-6315851 | None:intergenic | 50.0% | |
| !!! | GCTGGTTTTTGGGTTGAAGG+TGG | + | chr2_4:6315846-6315865 | None:intergenic | 50.0% |
| !! | AGGAGGAGGGTTTTTGGAAG+CGG | + | chr2_4:6316000-6316019 | None:intergenic | 50.0% |
| GAGATAGGAGTAGAAGGAGG+AGG | + | chr2_4:6316014-6316033 | None:intergenic | 50.0% | |
| GGGGTAGAGATAGGAGTAGA+AGG | + | chr2_4:6316020-6316039 | None:intergenic | 50.0% | |
| TGAGCCGGATTCAGATTCAG+CGG | + | chr2_4:6316048-6316067 | None:intergenic | 50.0% | |
| TCTGAATCCGGCTCAGAATC+CGG | - | chr2_4:6316053-6316072 | Msa0311450:CDS | 50.0% | |
| TTCAGAACCGGATTCTGAGC+CGG | + | chr2_4:6316063-6316082 | None:intergenic | 50.0% | |
| GTGGGTTCCGATTTCTGTTC+CGG | + | chr2_4:6316110-6316129 | None:intergenic | 50.0% | |
| TTAGGGTTAGGAGGTGGAGT+GGG | + | chr2_4:6316128-6316147 | None:intergenic | 50.0% | |
| ! | TTTAGGGTTAGGAGGTGGAG+TGG | + | chr2_4:6316129-6316148 | None:intergenic | 50.0% |
| TTGGGCTTGGACTTGGGTTT+GGG | + | chr2_4:6316183-6316202 | None:intergenic | 50.0% | |
| TTTGGGCTTGGACTTGGGTT+TGG | + | chr2_4:6316184-6316203 | None:intergenic | 50.0% | |
| TTGGGTTTGGGCTTGGACTT+GGG | + | chr2_4:6316189-6316208 | None:intergenic | 50.0% | |
| ATTGGGTTTGGGCTTGGACT+TGG | + | chr2_4:6316190-6316209 | None:intergenic | 50.0% | |
| ! | GAGTTGATTGGGTTTGGGCT+TGG | + | chr2_4:6316196-6316215 | None:intergenic | 50.0% |
| AGCCCAAACCCAATCAACTC+CGG | - | chr2_4:6316196-6316215 | Msa0311450:CDS | 50.0% | |
| ! | CACCGGAGTTGATTGGGTTT+GGG | + | chr2_4:6316201-6316220 | None:intergenic | 50.0% |
| TCCAAGAAGAAAACCACCGG+TGG | - | chr2_4:6316281-6316300 | Msa0311450:CDS | 50.0% | |
| ! | ACCACCGGTGGTTTTCTTCT+TGG | + | chr2_4:6316285-6316304 | None:intergenic | 50.0% |
| AAGAAGAAAACCACCGGTGG+TGG | - | chr2_4:6316284-6316303 | Msa0311450:CDS | 50.0% | |
| ! | TGATGATGAGAATGAGGCGG+AGG | - | chr2_4:6316316-6316335 | Msa0311450:CDS | 50.0% |
| AATGCAGCTGCTTCCTTCAG+CGG | + | chr2_4:6316461-6316480 | None:intergenic | 50.0% | |
| GGGTATAGCTGTGCTGGATA+AGG | - | chr2_4:6316835-6316854 | Msa0311450:CDS | 50.0% | |
| GGATGCTGCAAAAAGCGGTT+TGG | - | chr2_4:6316856-6316875 | Msa0311450:CDS | 50.0% | |
| GGAGTCAGATAGGGTTGAGT+TGG | - | chr2_4:6316889-6316908 | Msa0311450:CDS | 50.0% | |
| !! | GTCAGATAGGGTTGAGTTGG+AGG | - | chr2_4:6316892-6316911 | Msa0311450:CDS | 50.0% |
| !! | ATAGGGTTGAGTTGGAGGAG+AGG | - | chr2_4:6316897-6316916 | Msa0311450:CDS | 50.0% |
| ! | GTTTTTGAATCGCGCTGAGG+TGG | - | chr2_4:6316952-6316971 | Msa0311450:CDS | 50.0% |
| GGTTAGGGAGCAGACTAGAT+TGG | - | chr2_4:6316973-6316992 | Msa0311450:CDS | 50.0% | |
| GCAGACTAGATTGGCATTGC+AGG | - | chr2_4:6316982-6317001 | Msa0311450:CDS | 50.0% | |
| ! | GCGAGGCGTTTCTTTGGCTT+TGG | + | chr2_4:6315777-6315796 | None:intergenic | 55.0% |
| ! | ACGAGAGCGAGGCGTTTCTT+TGG | + | chr2_4:6315783-6315802 | None:intergenic | 55.0% |
| TTGATCCTCGTCGGAGGAAG+AGG | + | chr2_4:6315823-6315842 | None:intergenic | 55.0% | |
| !! | GGAGGAGGGTTTTTGGAAGC+GGG | + | chr2_4:6315999-6316018 | None:intergenic | 55.0% |
| GCGGGTTTAGGGGTAGAGAT+AGG | + | chr2_4:6316029-6316048 | None:intergenic | 55.0% | |
| GAGCCGGATTCAGATTCAGC+GGG | + | chr2_4:6316047-6316066 | None:intergenic | 55.0% | |
| ! | GCACCGGAGTTGATTGGGTT+TGG | + | chr2_4:6316202-6316221 | None:intergenic | 55.0% |
| ! | CGCTTAGTTCCGGACTTGGT+CGG | + | chr2_4:6316224-6316243 | None:intergenic | 55.0% |
| ! | AAGAAAACCACCGGTGGTGG+TGG | - | chr2_4:6316287-6316306 | Msa0311450:CDS | 55.0% |
| ATCAGAACCACCACCACCAC+CGG | + | chr2_4:6316300-6316319 | None:intergenic | 55.0% | |
| TGATGAGAATGAGGCGGAGG+AGG | - | chr2_4:6316319-6316338 | Msa0311450:CDS | 55.0% | |
| ! | GGGGATTTTGTGGCGAAGAC+TGG | - | chr2_4:6316428-6316447 | Msa0311450:CDS | 55.0% |
| GACTGGAAAGGATCCGCTGA+AGG | - | chr2_4:6316445-6316464 | Msa0311450:CDS | 55.0% | |
| GGAGAGGTGGAAGAAGTTGC+AGG | - | chr2_4:6316913-6316932 | Msa0311450:CDS | 55.0% | |
| TGAATCGCGCTGAGGTGGTT+AGG | - | chr2_4:6316957-6316976 | Msa0311450:CDS | 55.0% | |
| GAATCGCGCTGAGGTGGTTA+GGG | - | chr2_4:6316958-6316977 | Msa0311450:CDS | 55.0% | |
| ! | GCGAGGCGTTTCTTTGGCTT+TGG | + | chr2_4:6315777-6315796 | None:intergenic | 55.0% |
| ! | ACGAGAGCGAGGCGTTTCTT+TGG | + | chr2_4:6315783-6315802 | None:intergenic | 55.0% |
| TTGATCCTCGTCGGAGGAAG+AGG | + | chr2_4:6315823-6315842 | None:intergenic | 55.0% | |
| !! | GGAGGAGGGTTTTTGGAAGC+GGG | + | chr2_4:6315999-6316018 | None:intergenic | 55.0% |
| GCGGGTTTAGGGGTAGAGAT+AGG | + | chr2_4:6316029-6316048 | None:intergenic | 55.0% | |
| GAGCCGGATTCAGATTCAGC+GGG | + | chr2_4:6316047-6316066 | None:intergenic | 55.0% | |
| ! | GCACCGGAGTTGATTGGGTT+TGG | + | chr2_4:6316202-6316221 | None:intergenic | 55.0% |
| ! | CGCTTAGTTCCGGACTTGGT+CGG | + | chr2_4:6316224-6316243 | None:intergenic | 55.0% |
| ! | AAGAAAACCACCGGTGGTGG+TGG | - | chr2_4:6316287-6316306 | Msa0311450:CDS | 55.0% |
| ATCAGAACCACCACCACCAC+CGG | + | chr2_4:6316300-6316319 | None:intergenic | 55.0% | |
| TGATGAGAATGAGGCGGAGG+AGG | - | chr2_4:6316319-6316338 | Msa0311450:CDS | 55.0% | |
| ! | GGGGATTTTGTGGCGAAGAC+TGG | - | chr2_4:6316428-6316447 | Msa0311450:CDS | 55.0% |
| GACTGGAAAGGATCCGCTGA+AGG | - | chr2_4:6316445-6316464 | Msa0311450:CDS | 55.0% | |
| GGAGAGGTGGAAGAAGTTGC+AGG | - | chr2_4:6316913-6316932 | Msa0311450:CDS | 55.0% | |
| TGAATCGCGCTGAGGTGGTT+AGG | - | chr2_4:6316957-6316976 | Msa0311450:CDS | 55.0% | |
| GAATCGCGCTGAGGTGGTTA+GGG | - | chr2_4:6316958-6316977 | Msa0311450:CDS | 55.0% | |
| ATCCTCGTCGGAGGAAGAGG+CGG | + | chr2_4:6315820-6315839 | None:intergenic | 60.0% | |
| AGGTGGTTGATCCTCGTCGG+AGG | + | chr2_4:6315829-6315848 | None:intergenic | 60.0% | |
| ! | GGTCGGCACCGGAGTTGATT+GGG | + | chr2_4:6316207-6316226 | None:intergenic | 60.0% |
| ! | TGGTCGGCACCGGAGTTGAT+TGG | + | chr2_4:6316208-6316227 | None:intergenic | 60.0% |
| GGCACGCTTAGTTCCGGACT+TGG | + | chr2_4:6316228-6316247 | None:intergenic | 60.0% | |
| TTCGGCGGCACGCTTAGTTC+CGG | + | chr2_4:6316234-6316253 | None:intergenic | 60.0% | |
| CGTGCCGCCGAAAGTAACAC+TGG | - | chr2_4:6316242-6316261 | Msa0311450:CDS | 60.0% | |
| !! | AAAACCACCGGTGGTGGTGG+TGG | - | chr2_4:6316290-6316309 | Msa0311450:CDS | 60.0% |
| !! | GGGTTGAGTTGGAGGAGAGG+TGG | - | chr2_4:6316900-6316919 | Msa0311450:CDS | 60.0% |
| GAAGTTGCAGGCTGCCGAGA+TGG | - | chr2_4:6316925-6316944 | Msa0311450:CDS | 60.0% | |
| ATCCTCGTCGGAGGAAGAGG+CGG | + | chr2_4:6315820-6315839 | None:intergenic | 60.0% | |
| AGGTGGTTGATCCTCGTCGG+AGG | + | chr2_4:6315829-6315848 | None:intergenic | 60.0% | |
| ! | GGTCGGCACCGGAGTTGATT+GGG | + | chr2_4:6316207-6316226 | None:intergenic | 60.0% |
| ! | TGGTCGGCACCGGAGTTGAT+TGG | + | chr2_4:6316208-6316227 | None:intergenic | 60.0% |
| GGCACGCTTAGTTCCGGACT+TGG | + | chr2_4:6316228-6316247 | None:intergenic | 60.0% | |
| TTCGGCGGCACGCTTAGTTC+CGG | + | chr2_4:6316234-6316253 | None:intergenic | 60.0% | |
| CGTGCCGCCGAAAGTAACAC+TGG | - | chr2_4:6316242-6316261 | Msa0311450:CDS | 60.0% | |
| !! | AAAACCACCGGTGGTGGTGG+TGG | - | chr2_4:6316290-6316309 | Msa0311450:CDS | 60.0% |
| !! | GGGTTGAGTTGGAGGAGAGG+TGG | - | chr2_4:6316900-6316919 | Msa0311450:CDS | 60.0% |
| GAAGTTGCAGGCTGCCGAGA+TGG | - | chr2_4:6316925-6316944 | Msa0311450:CDS | 60.0% | |
| TCGTCGGAGGAAGAGGCGGT+GGG | + | chr2_4:6315816-6315835 | None:intergenic | 65.0% | |
| !! | ACTCCGGTGCCGACCAAGTC+CGG | - | chr2_4:6316212-6316231 | Msa0311450:CDS | 65.0% |
| ! | GTTCCGGACTTGGTCGGCAC+CGG | + | chr2_4:6316218-6316237 | None:intergenic | 65.0% |
| AGAACCACCACCACCACCGG+TGG | + | chr2_4:6316297-6316316 | None:intergenic | 65.0% | |
| GGCTGCGGGTATAGCTGTGC+TGG | - | chr2_4:6316829-6316848 | Msa0311450:CDS | 65.0% | |
| TCGTCGGAGGAAGAGGCGGT+GGG | + | chr2_4:6315816-6315835 | None:intergenic | 65.0% | |
| !! | ACTCCGGTGCCGACCAAGTC+CGG | - | chr2_4:6316212-6316231 | Msa0311450:CDS | 65.0% |
| ! | GTTCCGGACTTGGTCGGCAC+CGG | + | chr2_4:6316218-6316237 | None:intergenic | 65.0% |
| AGAACCACCACCACCACCGG+TGG | + | chr2_4:6316297-6316316 | None:intergenic | 65.0% | |
| GGCTGCGGGTATAGCTGTGC+TGG | - | chr2_4:6316829-6316848 | Msa0311450:CDS | 65.0% | |
| GTGGGTCGTCGACGAGAGCG+AGG | + | chr2_4:6315794-6315813 | None:intergenic | 70.0% | |
| CGGAGGAAGAGGCGGTGGGT+GGG | + | chr2_4:6315812-6315831 | None:intergenic | 70.0% | |
| TCGGAGGAAGAGGCGGTGGG+TGG | + | chr2_4:6315813-6315832 | None:intergenic | 70.0% | |
| CTCGTCGGAGGAAGAGGCGG+TGG | + | chr2_4:6315817-6315836 | None:intergenic | 70.0% | |
| CACCGCCTCTTCCTCCGACG+AGG | - | chr2_4:6315815-6315834 | Msa0311450:CDS | 70.0% | |
| GTGGGTCGTCGACGAGAGCG+AGG | + | chr2_4:6315794-6315813 | None:intergenic | 70.0% | |
| CGGAGGAAGAGGCGGTGGGT+GGG | + | chr2_4:6315812-6315831 | None:intergenic | 70.0% | |
| TCGGAGGAAGAGGCGGTGGG+TGG | + | chr2_4:6315813-6315832 | None:intergenic | 70.0% | |
| CTCGTCGGAGGAAGAGGCGG+TGG | + | chr2_4:6315817-6315836 | None:intergenic | 70.0% | |
| CACCGCCTCTTCCTCCGACG+AGG | - | chr2_4:6315815-6315834 | Msa0311450:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 6315768 | 6317030 | 6315768 | ID=Msa0311450;Name=Msa0311450 |
| chr2_4 | mRNA | 6315768 | 6317030 | 6315768 | ID=Msa0311450-mRNA-1;Parent=Msa0311450;Name=Msa0311450-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|420 |
| chr2_4 | exon | 6315768 | 6317030 | 6315768 | ID=Msa0311450-mRNA-1:exon:2422;Parent=Msa0311450-mRNA-1 |
| chr2_4 | CDS | 6315768 | 6317030 | 6315768 | ID=Msa0311450-mRNA-1:cds;Parent=Msa0311450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
