Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0313120 | XP_003593604.1 | 83.573 | 347 | 35 | 5 | 1 | 336 | 1 | 336 | 1.23e-153 | 444 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0313120 | sp|Q8LDR0|DOF54_ARATH | 63.043 | 92 | 28 | 2 | 18 | 109 | 44 | 129 | 7.20e-32 | 124 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0313120 | TF | C2C2-Dof |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0313120 | MtrunA17_Chr2g0282441 | 83.573 | 347 | 35 | 5 | 1 | 336 | 1 | 336 | 1.13e-157 | 444 |
Msa0313120 | MtrunA17_Chr2g0328021 | 65.556 | 90 | 25 | 2 | 12 | 95 | 45 | 134 | 1.18e-33 | 125 |
Msa0313120 | MtrunA17_Chr8g0346551 | 65.882 | 85 | 28 | 1 | 19 | 102 | 17 | 101 | 1.93e-32 | 122 |
Msa0313120 | MtrunA17_Chr4g0030051 | 77.941 | 68 | 12 | 2 | 11 | 76 | 26 | 92 | 5.54e-31 | 118 |
Msa0313120 | MtrunA17_Chr7g0223311 | 56.863 | 102 | 33 | 2 | 11 | 111 | 62 | 153 | 6.25e-31 | 120 |
Msa0313120 | MtrunA17_Chr8g0367161 | 82.540 | 63 | 10 | 1 | 26 | 88 | 33 | 94 | 7.87e-31 | 119 |
Msa0313120 | MtrunA17_Chr2g0326001 | 78.689 | 61 | 10 | 1 | 22 | 79 | 34 | 94 | 9.78e-30 | 115 |
Msa0313120 | MtrunA17_Chr4g0047001 | 65.882 | 85 | 18 | 2 | 26 | 100 | 56 | 139 | 1.13e-29 | 117 |
Msa0313120 | MtrunA17_Chr3g0127201 | 75.385 | 65 | 13 | 1 | 19 | 80 | 18 | 82 | 1.60e-29 | 114 |
Msa0313120 | MtrunA17_Chr3g0126201 | 72.308 | 65 | 15 | 1 | 17 | 81 | 46 | 107 | 4.59e-29 | 114 |
Msa0313120 | MtrunA17_Chr3g0117601 | 83.636 | 55 | 9 | 0 | 21 | 75 | 57 | 111 | 5.08e-29 | 114 |
Msa0313120 | MtrunA17_Chr8g0374251 | 80.357 | 56 | 11 | 0 | 23 | 78 | 66 | 121 | 6.60e-29 | 114 |
Msa0313120 | MtrunA17_Chr7g0237921 | 66.216 | 74 | 24 | 1 | 6 | 79 | 58 | 130 | 1.04e-28 | 113 |
Msa0313120 | MtrunA17_Chr5g0411951 | 84.906 | 53 | 8 | 0 | 23 | 75 | 41 | 93 | 1.85e-28 | 112 |
Msa0313120 | MtrunA17_Chr1g0188851 | 66.667 | 69 | 18 | 1 | 18 | 81 | 31 | 99 | 1.89e-28 | 111 |
Msa0313120 | MtrunA17_Chr4g0010151 | 66.667 | 75 | 20 | 2 | 10 | 79 | 62 | 136 | 4.48e-28 | 112 |
Msa0313120 | MtrunA17_Chr4g0061761 | 88.000 | 50 | 6 | 0 | 26 | 75 | 41 | 90 | 4.91e-28 | 111 |
Msa0313120 | MtrunA17_Chr4g0031411 | 40.571 | 175 | 65 | 5 | 22 | 181 | 71 | 221 | 7.82e-28 | 110 |
Msa0313120 | MtrunA17_Chr1g0177251 | 81.132 | 53 | 10 | 0 | 27 | 79 | 14 | 66 | 5.82e-27 | 107 |
Msa0313120 | MtrunA17_Chr2g0308011 | 87.500 | 48 | 6 | 0 | 26 | 73 | 38 | 85 | 7.47e-27 | 105 |
Msa0313120 | MtrunA17_Chr8g0374111 | 64.000 | 75 | 22 | 2 | 22 | 91 | 22 | 96 | 2.52e-26 | 104 |
Msa0313120 | MtrunA17_Chr2g0282511 | 89.583 | 48 | 5 | 0 | 26 | 73 | 46 | 93 | 8.17e-26 | 105 |
Msa0313120 | MtrunA17_Chr8g0341671 | 72.881 | 59 | 16 | 0 | 26 | 84 | 21 | 79 | 9.18e-26 | 102 |
Msa0313120 | MtrunA17_Chr2g0282051 | 64.286 | 70 | 22 | 2 | 14 | 81 | 33 | 101 | 4.10e-24 | 99.8 |
Msa0313120 | MtrunA17_Chr3g0092111 | 68.421 | 57 | 18 | 0 | 27 | 83 | 138 | 194 | 8.45e-24 | 101 |
Msa0313120 | MtrunA17_Chr4g0047761 | 76.364 | 55 | 12 | 1 | 27 | 81 | 74 | 127 | 8.48e-24 | 99.8 |
Msa0313120 | MtrunA17_Chr7g0217581 | 60.274 | 73 | 27 | 1 | 27 | 97 | 234 | 306 | 2.54e-23 | 100 |
Msa0313120 | MtrunA17_Chr4g0042481 | 68.421 | 57 | 18 | 0 | 27 | 83 | 124 | 180 | 3.90e-23 | 99.8 |
Msa0313120 | MtrunA17_Chr6g0453321 | 53.409 | 88 | 32 | 2 | 17 | 95 | 125 | 212 | 8.92e-23 | 99.0 |
Msa0313120 | MtrunA17_Chr7g0254161 | 52.778 | 72 | 34 | 0 | 7 | 78 | 83 | 154 | 1.16e-22 | 97.8 |
Msa0313120 | MtrunA17_Chr2g0283811 | 71.154 | 52 | 15 | 0 | 27 | 78 | 49 | 100 | 1.44e-22 | 92.4 |
Msa0313120 | MtrunA17_Chr6g0460731 | 41.085 | 129 | 58 | 3 | 26 | 151 | 97 | 210 | 2.16e-22 | 96.7 |
Msa0313120 | MtrunA17_Chr8g0355261 | 64.815 | 54 | 19 | 0 | 27 | 80 | 120 | 173 | 2.24e-22 | 97.4 |
Msa0313120 | MtrunA17_Chr6g0460721 | 64.815 | 54 | 19 | 0 | 26 | 79 | 90 | 143 | 5.19e-22 | 94.7 |
Msa0313120 | MtrunA17_Chr5g0417571 | 53.247 | 77 | 32 | 1 | 4 | 80 | 121 | 193 | 1.50e-20 | 90.5 |
Msa0313120 | MtrunA17_Chr5g0417551 | 65.517 | 58 | 20 | 0 | 27 | 84 | 129 | 186 | 4.70e-20 | 89.7 |
Msa0313120 | MtrunA17_Chr5g0417601 | 67.308 | 52 | 17 | 0 | 27 | 78 | 142 | 193 | 6.16e-20 | 89.7 |
Msa0313120 | MtrunA17_Chr5g0417561 | 65.517 | 58 | 20 | 0 | 27 | 84 | 121 | 178 | 1.20e-19 | 88.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0313120 | AT5G60850.1 | 63.043 | 92 | 28 | 2 | 18 | 109 | 44 | 129 | 7.32e-33 | 124 |
Msa0313120 | AT5G60200.1 | 73.529 | 68 | 14 | 1 | 22 | 85 | 48 | 115 | 5.09e-32 | 120 |
Msa0313120 | AT5G62940.1 | 75.362 | 69 | 12 | 1 | 7 | 75 | 60 | 123 | 1.09e-31 | 122 |
Msa0313120 | AT2G28510.1 | 77.419 | 62 | 14 | 0 | 23 | 84 | 46 | 107 | 1.78e-30 | 117 |
Msa0313120 | AT1G07640.1 | 67.568 | 74 | 22 | 1 | 8 | 79 | 2 | 75 | 1.04e-29 | 115 |
Msa0313120 | AT1G51700.1 | 68.000 | 75 | 22 | 1 | 26 | 100 | 34 | 106 | 1.20e-29 | 112 |
Msa0313120 | AT1G07640.2 | 67.568 | 74 | 22 | 1 | 8 | 79 | 58 | 131 | 1.63e-29 | 115 |
Msa0313120 | AT5G65590.1 | 43.976 | 166 | 72 | 5 | 15 | 177 | 31 | 178 | 1.99e-29 | 115 |
Msa0313120 | AT1G07640.3 | 67.568 | 74 | 22 | 1 | 8 | 79 | 66 | 139 | 2.02e-29 | 115 |
Msa0313120 | AT3G61850.2 | 62.353 | 85 | 29 | 2 | 19 | 102 | 55 | 137 | 2.61e-29 | 114 |
Msa0313120 | AT3G61850.3 | 62.353 | 85 | 29 | 2 | 19 | 102 | 55 | 137 | 2.61e-29 | 114 |
Msa0313120 | AT3G52440.1 | 72.727 | 66 | 18 | 0 | 27 | 92 | 27 | 92 | 2.84e-29 | 113 |
Msa0313120 | AT3G61850.1 | 62.353 | 85 | 29 | 2 | 19 | 102 | 67 | 149 | 3.37e-29 | 114 |
Msa0313120 | AT3G52440.2 | 72.727 | 66 | 18 | 0 | 27 | 92 | 46 | 111 | 3.45e-29 | 113 |
Msa0313120 | AT3G61850.5 | 62.353 | 85 | 29 | 2 | 19 | 102 | 55 | 137 | 3.78e-29 | 114 |
Msa0313120 | AT3G61850.4 | 62.353 | 85 | 29 | 2 | 19 | 102 | 67 | 149 | 4.67e-29 | 114 |
Msa0313120 | AT2G28810.2 | 64.789 | 71 | 25 | 0 | 6 | 76 | 58 | 128 | 9.01e-29 | 113 |
Msa0313120 | AT2G37590.1 | 78.571 | 56 | 12 | 0 | 26 | 81 | 90 | 145 | 9.69e-29 | 113 |
Msa0313120 | AT3G45610.1 | 68.750 | 64 | 20 | 0 | 23 | 86 | 38 | 101 | 1.02e-28 | 111 |
Msa0313120 | AT2G28810.1 | 64.789 | 71 | 25 | 0 | 6 | 76 | 75 | 145 | 1.34e-28 | 113 |
Msa0313120 | AT4G21050.1 | 67.647 | 68 | 22 | 0 | 22 | 89 | 21 | 88 | 2.34e-28 | 109 |
Msa0313120 | AT3G55370.1 | 76.667 | 60 | 14 | 0 | 27 | 86 | 78 | 137 | 2.91e-28 | 112 |
Msa0313120 | AT5G66940.1 | 50.000 | 110 | 50 | 3 | 27 | 131 | 34 | 143 | 3.70e-28 | 109 |
Msa0313120 | AT3G55370.2 | 76.667 | 60 | 14 | 0 | 27 | 86 | 78 | 137 | 4.08e-28 | 112 |
Msa0313120 | AT3G55370.3 | 65.753 | 73 | 22 | 1 | 17 | 86 | 110 | 182 | 4.89e-28 | 112 |
Msa0313120 | AT1G21340.1 | 77.586 | 58 | 13 | 0 | 27 | 84 | 40 | 97 | 6.94e-28 | 109 |
Msa0313120 | AT1G28310.1 | 82.143 | 56 | 10 | 0 | 26 | 81 | 28 | 83 | 7.60e-28 | 110 |
Msa0313120 | AT4G00940.1 | 77.193 | 57 | 13 | 0 | 23 | 79 | 66 | 122 | 1.12e-27 | 110 |
Msa0313120 | AT4G00940.3 | 77.193 | 57 | 13 | 0 | 23 | 79 | 66 | 122 | 1.12e-27 | 110 |
Msa0313120 | AT4G00940.2 | 77.193 | 57 | 13 | 0 | 23 | 79 | 66 | 122 | 1.12e-27 | 110 |
Msa0313120 | AT1G28310.2 | 82.143 | 56 | 10 | 0 | 26 | 81 | 52 | 107 | 1.15e-27 | 110 |
Msa0313120 | AT4G38000.1 | 50.000 | 120 | 40 | 3 | 26 | 143 | 42 | 143 | 6.20e-27 | 107 |
Msa0313120 | AT5G02460.1 | 59.783 | 92 | 36 | 1 | 26 | 117 | 96 | 186 | 8.59e-27 | 109 |
Msa0313120 | AT3G21270.1 | 86.275 | 51 | 7 | 0 | 26 | 76 | 30 | 80 | 1.00e-26 | 105 |
Msa0313120 | AT4G24060.1 | 75.439 | 57 | 14 | 0 | 23 | 79 | 51 | 107 | 2.56e-26 | 107 |
Msa0313120 | AT3G50410.1 | 78.947 | 57 | 11 | 1 | 27 | 82 | 32 | 88 | 3.41e-26 | 105 |
Msa0313120 | AT2G46590.1 | 76.364 | 55 | 12 | 1 | 19 | 72 | 61 | 115 | 1.08e-24 | 103 |
Msa0313120 | AT1G47655.1 | 76.471 | 51 | 12 | 0 | 23 | 73 | 27 | 77 | 1.17e-24 | 99.8 |
Msa0313120 | AT1G64620.1 | 67.742 | 62 | 15 | 1 | 18 | 74 | 37 | 98 | 1.27e-24 | 102 |
Msa0313120 | AT2G46590.2 | 76.364 | 55 | 12 | 1 | 19 | 72 | 73 | 127 | 1.30e-24 | 103 |
Msa0313120 | AT3G47500.1 | 72.222 | 54 | 15 | 0 | 27 | 80 | 112 | 165 | 4.69e-23 | 99.8 |
Msa0313120 | AT5G62430.1 | 51.250 | 80 | 36 | 1 | 2 | 78 | 28 | 107 | 4.69e-23 | 97.4 |
Msa0313120 | AT4G21040.1 | 61.194 | 67 | 26 | 0 | 27 | 93 | 27 | 93 | 7.52e-23 | 95.5 |
Msa0313120 | AT1G69570.1 | 59.701 | 67 | 27 | 0 | 12 | 78 | 119 | 185 | 8.64e-23 | 98.6 |
Msa0313120 | AT5G39660.3 | 59.420 | 69 | 24 | 1 | 10 | 78 | 127 | 191 | 1.49e-22 | 98.2 |
Msa0313120 | AT5G39660.1 | 59.420 | 69 | 24 | 1 | 10 | 78 | 127 | 191 | 1.49e-22 | 98.2 |
Msa0313120 | AT5G39660.2 | 59.420 | 69 | 24 | 1 | 10 | 78 | 127 | 191 | 1.49e-22 | 98.2 |
Msa0313120 | AT2G34140.1 | 59.155 | 71 | 26 | 1 | 11 | 78 | 41 | 111 | 2.68e-22 | 92.4 |
Msa0313120 | AT1G29160.1 | 61.194 | 67 | 23 | 1 | 15 | 78 | 49 | 115 | 3.79e-22 | 92.0 |
Msa0313120 | AT4G21080.1 | 69.231 | 52 | 16 | 0 | 27 | 78 | 27 | 78 | 2.23e-21 | 92.0 |
Msa0313120 | AT1G26790.1 | 67.308 | 52 | 17 | 0 | 27 | 78 | 113 | 164 | 9.50e-21 | 92.4 |
Msa0313120 | AT4G21030.1 | 50.000 | 72 | 36 | 0 | 22 | 93 | 18 | 89 | 1.84e-16 | 77.0 |
Find 91 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAGCCTCTGATCAATCTTTA+TGG | 0.208599 | 2_4:+8432711 | Msa0313120:CDS |
GGGTAGTGGATCTGCTTCTT+TGG | 0.299081 | 2_4:+8432871 | Msa0313120:CDS |
CAACATTGAAACCTTGTAAA+AGG | 0.337370 | 2_4:-8432481 | None:intergenic |
GGTAGCGGTGATGTTGCTGC+TGG | 0.358687 | 2_4:+8432848 | Msa0313120:CDS |
CTTCTTTGGCTCTGAATCAA+TGG | 0.377878 | 2_4:+8432885 | Msa0313120:CDS |
GTTGGAGTTGGTGTTGGTCT+TGG | 0.379165 | 2_4:+8432440 | Msa0313120:CDS |
TGGTGTTGAGGATGAAGTTT+TGG | 0.384562 | 2_4:-8432168 | None:intergenic |
TTCTTTCAACTAGGTGGTAA+TGG | 0.386741 | 2_4:+8432560 | Msa0313120:CDS |
GTAGCGGTGATGTTGCTGCT+GGG | 0.397946 | 2_4:+8432849 | Msa0313120:CDS |
TTCCCTAAGGAATTACTTGA+TGG | 0.409259 | 2_4:-8432188 | None:intergenic |
CTGCTACTTATAATGAAAGT+TGG | 0.411866 | 2_4:+8432657 | Msa0313120:CDS |
TGAAAGAATTGTTGCGGCGG+TGG | 0.414683 | 2_4:-8432545 | None:intergenic |
ACACCATCAAGTAATTCCTT+AGG | 0.417503 | 2_4:+8432185 | Msa0313120:CDS |
CCACTATTGATGAAGCTTTG+AGG | 0.422498 | 2_4:-8432680 | None:intergenic |
TGTGCTGAAGAGTGTGTTGA+TGG | 0.423312 | 2_4:-8432389 | None:intergenic |
ATCAACACCACTTCAACTAA+TGG | 0.426570 | 2_4:+8432740 | Msa0313120:CDS |
TGTTGCGGCGGTGGACGATT+CGG | 0.426876 | 2_4:-8432536 | None:intergenic |
AATCAATGGCATGATCTGTC+AGG | 0.428092 | 2_4:+8432899 | Msa0313120:CDS |
GTTGGTGTTGGAGTTGGTGT+TGG | 0.430153 | 2_4:+8432434 | Msa0313120:CDS |
GTGGCAGTGTTGGCCGAGAC+AGG | 0.438645 | 2_4:-8432217 | None:intergenic |
GCTGGTGGTAGCCGTGGTGC+TGG | 0.442217 | 2_4:+8432824 | Msa0313120:CDS |
CCATCGCAGCCATGGTCAAC+TGG | 0.443933 | 2_4:-8432250 | None:intergenic |
GCAAAACATGCAGAAGGTAC+TGG | 0.452080 | 2_4:+8432084 | Msa0313120:CDS |
GAATGATTAAATGCCGCAAA+AGG | 0.453309 | 2_4:-8432353 | None:intergenic |
GGTAGTCGTGGTGTTGGTGC+TGG | 0.457080 | 2_4:+8432806 | Msa0313120:CDS |
CAGAATGTTGGTGTTGGAGT+TGG | 0.465123 | 2_4:+8432428 | Msa0313120:CDS |
GTAGCAACAGAAGTAGTAGA+TGG | 0.471780 | 2_4:-8432629 | None:intergenic |
CACCATCAAGTAATTCCTTA+GGG | 0.476186 | 2_4:+8432186 | Msa0313120:CDS |
TAGGGAATTCTTCCCTGTCT+CGG | 0.487674 | 2_4:+8432204 | Msa0313120:CDS |
TCCACCACCATTAGTTGAAG+TGG | 0.494139 | 2_4:-8432747 | None:intergenic |
TGTTGGTGGTGGTTGTCGTA+AGG | 0.494164 | 2_4:+8432136 | Msa0313120:CDS |
ATTAGTGTTGGTGCTGATGC+TGG | 0.494830 | 2_4:+8432782 | Msa0313120:CDS |
CCTCAAAGCTTCATCAATAG+TGG | 0.497822 | 2_4:+8432680 | Msa0313120:CDS |
AGCCGTGGTGCTGGTGGTAG+CGG | 0.499787 | 2_4:+8432833 | Msa0313120:CDS |
TTACGACAACCACCACCAAC+AGG | 0.505491 | 2_4:-8432134 | None:intergenic |
CTAGGACACTTCTGAGGTTG+AGG | 0.509691 | 2_4:-8431993 | None:intergenic |
AGAAATGTTCCTGTTGGTGG+TGG | 0.514308 | 2_4:+8432125 | Msa0313120:CDS |
CTCAACCTCAGAAGTGTCCT+AGG | 0.514646 | 2_4:+8431994 | Msa0313120:CDS |
CCGCAACAATTCTTTCAACT+AGG | 0.517280 | 2_4:+8432551 | Msa0313120:CDS |
TTTGAACAGTCTCAGAATGT+TGG | 0.527603 | 2_4:+8432416 | Msa0313120:CDS |
CCAGTTGACCATGGCTGCGA+TGG | 0.534868 | 2_4:+8432250 | Msa0313120:CDS |
TTGAGAAATGTTCCTGTTGG+TGG | 0.536092 | 2_4:+8432122 | Msa0313120:CDS |
ACCACTTCAACTAATGGTGG+TGG | 0.543681 | 2_4:+8432746 | Msa0313120:CDS |
CGCAGCCATGGTCAACTGGT+CGG | 0.551583 | 2_4:-8432246 | None:intergenic |
TCGGTTGATTGTGGCAGTGT+TGG | 0.553797 | 2_4:-8432227 | None:intergenic |
TAGCGGTGATGTTGCTGCTG+GGG | 0.555623 | 2_4:+8432850 | Msa0313120:CDS |
GCTGGTGGTAGTCGTGGTGT+TGG | 0.556337 | 2_4:+8432800 | Msa0313120:CDS |
AAGAACGTGGTGATGGTGGA+AGG | 0.564755 | 2_4:+8431937 | Msa0313120:CDS |
GTTGTTGTAATAGCAGAACT+TGG | 0.576616 | 2_4:-8432033 | None:intergenic |
TGCAGAAGGTACTGGACTCA+AGG | 0.580923 | 2_4:+8432092 | Msa0313120:CDS |
CGTGGTGATGGTGGAAGGAG+AGG | 0.581943 | 2_4:+8431942 | Msa0313120:CDS |
TGGCAGTGTTGGCCGAGACA+GGG | 0.584331 | 2_4:-8432216 | None:intergenic |
GTTGGTGGTGGTTGTCGTAA+GGG | 0.586036 | 2_4:+8432137 | Msa0313120:CDS |
GTCAACTGGTCGGTTGATTG+TGG | 0.591951 | 2_4:-8432236 | None:intergenic |
ATTCAAACCTCGTGGTTCAG+AGG | 0.592802 | 2_4:-8432597 | None:intergenic |
GAGCAAGAACGTGGTGATGG+TGG | 0.595958 | 2_4:+8431933 | Msa0313120:CDS |
CAGTCTCAGAATGTTGGTGT+TGG | 0.601097 | 2_4:+8432422 | Msa0313120:CDS |
AGCGGTGATGTTGCTGCTGG+GGG | 0.601330 | 2_4:+8432851 | Msa0313120:CDS |
GGTGGTAGCCGTGGTGCTGG+TGG | 0.612351 | 2_4:+8432827 | Msa0313120:CDS |
CAACAATTCTTTCAACTAGG+TGG | 0.614943 | 2_4:+8432554 | Msa0313120:CDS |
AGTCGTGGTGTTGGTGCTGG+TGG | 0.615015 | 2_4:+8432809 | Msa0313120:CDS |
ATCAATGGCATGATCTGTCA+GGG | 0.615122 | 2_4:+8432900 | Msa0313120:CDS |
GGAATTACTTGATGGTGTTG+AGG | 0.615613 | 2_4:-8432180 | None:intergenic |
TCTTCTGCAAAACATGCAGA+AGG | 0.615692 | 2_4:+8432078 | Msa0313120:CDS |
GTTGGTGCTGGTGGTAGCCG+TGG | 0.616357 | 2_4:+8432818 | Msa0313120:CDS |
AGAAGAAACGAGGCTGAGAG+AGG | 0.619615 | 2_4:-8432061 | None:intergenic |
ATGGAGCAAGAACGTGGTGA+TGG | 0.620486 | 2_4:+8431930 | Msa0313120:CDS |
CGTGGTTCAGAGGTAAACAT+TGG | 0.628309 | 2_4:-8432587 | None:intergenic |
GCTGATGCTGGTGGTAGTCG+TGG | 0.632658 | 2_4:+8432794 | Msa0313120:CDS |
ATGGTGGTGGAAATTCTGAA+AGG | 0.635909 | 2_4:+8432759 | Msa0313120:CDS |
AACACCACTTCAACTAATGG+TGG | 0.642679 | 2_4:+8432743 | Msa0313120:CDS |
GCAACAGAAGTAGTAGATGG+AGG | 0.642839 | 2_4:-8432626 | None:intergenic |
TTTCAACTAGGTGGTAATGG+AGG | 0.647517 | 2_4:+8432563 | Msa0313120:CDS |
CCTAGTTGAAAGAATTGTTG+CGG | 0.647938 | 2_4:-8432551 | None:intergenic |
CACCGCTACCACCAGCACCA+CGG | 0.647987 | 2_4:-8432835 | None:intergenic |
ACATTGAGAAATGTTCCTGT+TGG | 0.650180 | 2_4:+8432119 | Msa0313120:CDS |
AATTCTGAAAGGATTAGTGT+TGG | 0.651086 | 2_4:+8432770 | Msa0313120:CDS |
AGACAGGGAAGAATTCCCTA+AGG | 0.652666 | 2_4:-8432201 | None:intergenic |
TCACACCTAGGACACTTCTG+AGG | 0.655155 | 2_4:-8431999 | None:intergenic |
AGTGTTGGTGCTGATGCTGG+TGG | 0.659084 | 2_4:+8432785 | Msa0313120:CDS |
ATCAACCGACCAGTTGACCA+TGG | 0.659300 | 2_4:+8432241 | Msa0313120:CDS |
CATCAACAAGATCACTGAGG+AGG | 0.672156 | 2_4:-8432929 | None:intergenic |
GGAATCAAATTCAAACCTCG+TGG | 0.678570 | 2_4:-8432605 | None:intergenic |
TGAGAGATGGAGCAAGAACG+TGG | 0.685685 | 2_4:+8431924 | None:intergenic |
AGTTGAAAGAATTGTTGCGG+CGG | 0.685998 | 2_4:-8432548 | None:intergenic |
ACTCCATAAAGATTGATCAG+AGG | 0.693689 | 2_4:-8432714 | None:intergenic |
GTGTTGAATGAATCACACCT+AGG | 0.703840 | 2_4:-8432011 | None:intergenic |
GCTCTTGTAAGCTCATCACA+AGG | 0.707366 | 2_4:+8432512 | Msa0313120:CDS |
AGAAGGTACTGGACTCAAGG+TGG | 0.711298 | 2_4:+8432095 | Msa0313120:CDS |
ATGTTTACCTCTGAACCACG+AGG | 0.723992 | 2_4:+8432590 | Msa0313120:CDS |
CAACATCAACAAGATCACTG+AGG | 0.799835 | 2_4:-8432932 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TCAAATTTGAGCCTTTTACA+AGG | + | chr2_4:8432470-8432489 | Msa0313120:CDS | 30.0% |
CAACATTGAAACCTTGTAAA+AGG | - | chr2_4:8432484-8432503 | None:intergenic | 30.0% | |
! | CTGCTACTTATAATGAAAGT+TGG | + | chr2_4:8432657-8432676 | Msa0313120:CDS | 30.0% |
! | AATTCTGAAAGGATTAGTGT+TGG | + | chr2_4:8432770-8432789 | Msa0313120:CDS | 30.0% |
! | TCAAATTTGAGCCTTTTACA+AGG | + | chr2_4:8432470-8432489 | Msa0313120:CDS | 30.0% |
CAACATTGAAACCTTGTAAA+AGG | - | chr2_4:8432484-8432503 | None:intergenic | 30.0% | |
! | CTGCTACTTATAATGAAAGT+TGG | + | chr2_4:8432657-8432676 | Msa0313120:CDS | 30.0% |
! | AATTCTGAAAGGATTAGTGT+TGG | + | chr2_4:8432770-8432789 | Msa0313120:CDS | 30.0% |
GTTGTTGTAATAGCAGAACT+TGG | - | chr2_4:8432036-8432055 | None:intergenic | 35.0% | |
ACATTGAGAAATGTTCCTGT+TGG | + | chr2_4:8432119-8432138 | Msa0313120:CDS | 35.0% | |
ACACCATCAAGTAATTCCTT+AGG | + | chr2_4:8432185-8432204 | Msa0313120:CDS | 35.0% | |
CACCATCAAGTAATTCCTTA+GGG | + | chr2_4:8432186-8432205 | Msa0313120:CDS | 35.0% | |
TTCCCTAAGGAATTACTTGA+TGG | - | chr2_4:8432191-8432210 | None:intergenic | 35.0% | |
TTGATAAAAAGAAGCAGCAG+AGG | - | chr2_4:8432309-8432328 | None:intergenic | 35.0% | |
!! | TCTGCTGCTTCTTTTTATCA+AGG | + | chr2_4:8432308-8432327 | Msa0313120:CDS | 35.0% |
!!! | TTTTATCAAGGAGGTGTTGT+TGG | + | chr2_4:8432320-8432339 | Msa0313120:CDS | 35.0% |
GAATGATTAAATGCCGCAAA+AGG | - | chr2_4:8432356-8432375 | None:intergenic | 35.0% | |
TTTGAACAGTCTCAGAATGT+TGG | + | chr2_4:8432416-8432435 | Msa0313120:CDS | 35.0% | |
CCTAGTTGAAAGAATTGTTG+CGG | - | chr2_4:8432554-8432573 | None:intergenic | 35.0% | |
CAACAATTCTTTCAACTAGG+TGG | + | chr2_4:8432554-8432573 | Msa0313120:CDS | 35.0% | |
TTCTTTCAACTAGGTGGTAA+TGG | + | chr2_4:8432560-8432579 | Msa0313120:CDS | 35.0% | |
ACTCCATAAAGATTGATCAG+AGG | - | chr2_4:8432717-8432736 | None:intergenic | 35.0% | |
ATCAACACCACTTCAACTAA+TGG | + | chr2_4:8432740-8432759 | Msa0313120:CDS | 35.0% | |
GTTGTTGTAATAGCAGAACT+TGG | - | chr2_4:8432036-8432055 | None:intergenic | 35.0% | |
ACATTGAGAAATGTTCCTGT+TGG | + | chr2_4:8432119-8432138 | Msa0313120:CDS | 35.0% | |
ACACCATCAAGTAATTCCTT+AGG | + | chr2_4:8432185-8432204 | Msa0313120:CDS | 35.0% | |
CACCATCAAGTAATTCCTTA+GGG | + | chr2_4:8432186-8432205 | Msa0313120:CDS | 35.0% | |
TTCCCTAAGGAATTACTTGA+TGG | - | chr2_4:8432191-8432210 | None:intergenic | 35.0% | |
TTGATAAAAAGAAGCAGCAG+AGG | - | chr2_4:8432309-8432328 | None:intergenic | 35.0% | |
!! | TCTGCTGCTTCTTTTTATCA+AGG | + | chr2_4:8432308-8432327 | Msa0313120:CDS | 35.0% |
!!! | TTTTATCAAGGAGGTGTTGT+TGG | + | chr2_4:8432320-8432339 | Msa0313120:CDS | 35.0% |
GAATGATTAAATGCCGCAAA+AGG | - | chr2_4:8432356-8432375 | None:intergenic | 35.0% | |
TTTGAACAGTCTCAGAATGT+TGG | + | chr2_4:8432416-8432435 | Msa0313120:CDS | 35.0% | |
CCTAGTTGAAAGAATTGTTG+CGG | - | chr2_4:8432554-8432573 | None:intergenic | 35.0% | |
CAACAATTCTTTCAACTAGG+TGG | + | chr2_4:8432554-8432573 | Msa0313120:CDS | 35.0% | |
TTCTTTCAACTAGGTGGTAA+TGG | + | chr2_4:8432560-8432579 | Msa0313120:CDS | 35.0% | |
ACTCCATAAAGATTGATCAG+AGG | - | chr2_4:8432717-8432736 | None:intergenic | 35.0% | |
ATCAACACCACTTCAACTAA+TGG | + | chr2_4:8432740-8432759 | Msa0313120:CDS | 35.0% | |
GTGTTGAATGAATCACACCT+AGG | - | chr2_4:8432014-8432033 | None:intergenic | 40.0% | |
! | CATGTTTTGCAGAAGAAACG+AGG | - | chr2_4:8432074-8432093 | None:intergenic | 40.0% |
TCTTCTGCAAAACATGCAGA+AGG | + | chr2_4:8432078-8432097 | Msa0313120:CDS | 40.0% | |
TTGAGAAATGTTCCTGTTGG+TGG | + | chr2_4:8432122-8432141 | Msa0313120:CDS | 40.0% | |
!! | TGGTGTTGAGGATGAAGTTT+TGG | - | chr2_4:8432171-8432190 | None:intergenic | 40.0% |
!! | GGAATTACTTGATGGTGTTG+AGG | - | chr2_4:8432183-8432202 | None:intergenic | 40.0% |
! | GCTGCTTCTTTTTATCAAGG+AGG | + | chr2_4:8432311-8432330 | Msa0313120:CDS | 40.0% |
AGTTGAAAGAATTGTTGCGG+CGG | - | chr2_4:8432551-8432570 | None:intergenic | 40.0% | |
CCGCAACAATTCTTTCAACT+AGG | + | chr2_4:8432551-8432570 | Msa0313120:CDS | 40.0% | |
!! | TTTCAACTAGGTGGTAATGG+AGG | + | chr2_4:8432563-8432582 | Msa0313120:CDS | 40.0% |
GGAATCAAATTCAAACCTCG+TGG | - | chr2_4:8432608-8432627 | None:intergenic | 40.0% | |
GTAGCAACAGAAGTAGTAGA+TGG | - | chr2_4:8432632-8432651 | None:intergenic | 40.0% | |
CCACTATTGATGAAGCTTTG+AGG | - | chr2_4:8432683-8432702 | None:intergenic | 40.0% | |
CCTCAAAGCTTCATCAATAG+TGG | + | chr2_4:8432680-8432699 | Msa0313120:CDS | 40.0% | |
GAGCCTCTGATCAATCTTTA+TGG | + | chr2_4:8432711-8432730 | Msa0313120:CDS | 40.0% | |
AACACCACTTCAACTAATGG+TGG | + | chr2_4:8432743-8432762 | Msa0313120:CDS | 40.0% | |
!! | ATGGTGGTGGAAATTCTGAA+AGG | + | chr2_4:8432759-8432778 | Msa0313120:CDS | 40.0% |
!! | CTTCTTTGGCTCTGAATCAA+TGG | + | chr2_4:8432885-8432904 | Msa0313120:CDS | 40.0% |
AATCAATGGCATGATCTGTC+AGG | + | chr2_4:8432899-8432918 | Msa0313120:CDS | 40.0% | |
ATCAATGGCATGATCTGTCA+GGG | + | chr2_4:8432900-8432919 | Msa0313120:CDS | 40.0% | |
GTGTTGAATGAATCACACCT+AGG | - | chr2_4:8432014-8432033 | None:intergenic | 40.0% | |
! | CATGTTTTGCAGAAGAAACG+AGG | - | chr2_4:8432074-8432093 | None:intergenic | 40.0% |
TCTTCTGCAAAACATGCAGA+AGG | + | chr2_4:8432078-8432097 | Msa0313120:CDS | 40.0% | |
TTGAGAAATGTTCCTGTTGG+TGG | + | chr2_4:8432122-8432141 | Msa0313120:CDS | 40.0% | |
!! | TGGTGTTGAGGATGAAGTTT+TGG | - | chr2_4:8432171-8432190 | None:intergenic | 40.0% |
!! | GGAATTACTTGATGGTGTTG+AGG | - | chr2_4:8432183-8432202 | None:intergenic | 40.0% |
! | GCTGCTTCTTTTTATCAAGG+AGG | + | chr2_4:8432311-8432330 | Msa0313120:CDS | 40.0% |
AGTTGAAAGAATTGTTGCGG+CGG | - | chr2_4:8432551-8432570 | None:intergenic | 40.0% | |
CCGCAACAATTCTTTCAACT+AGG | + | chr2_4:8432551-8432570 | Msa0313120:CDS | 40.0% | |
!! | TTTCAACTAGGTGGTAATGG+AGG | + | chr2_4:8432563-8432582 | Msa0313120:CDS | 40.0% |
GGAATCAAATTCAAACCTCG+TGG | - | chr2_4:8432608-8432627 | None:intergenic | 40.0% | |
GTAGCAACAGAAGTAGTAGA+TGG | - | chr2_4:8432632-8432651 | None:intergenic | 40.0% | |
CCACTATTGATGAAGCTTTG+AGG | - | chr2_4:8432683-8432702 | None:intergenic | 40.0% | |
CCTCAAAGCTTCATCAATAG+TGG | + | chr2_4:8432680-8432699 | Msa0313120:CDS | 40.0% | |
GAGCCTCTGATCAATCTTTA+TGG | + | chr2_4:8432711-8432730 | Msa0313120:CDS | 40.0% | |
AACACCACTTCAACTAATGG+TGG | + | chr2_4:8432743-8432762 | Msa0313120:CDS | 40.0% | |
!! | ATGGTGGTGGAAATTCTGAA+AGG | + | chr2_4:8432759-8432778 | Msa0313120:CDS | 40.0% |
!! | CTTCTTTGGCTCTGAATCAA+TGG | + | chr2_4:8432885-8432904 | Msa0313120:CDS | 40.0% |
AATCAATGGCATGATCTGTC+AGG | + | chr2_4:8432899-8432918 | Msa0313120:CDS | 40.0% | |
ATCAATGGCATGATCTGTCA+GGG | + | chr2_4:8432900-8432919 | Msa0313120:CDS | 40.0% | |
! | GCAAAACATGCAGAAGGTAC+TGG | + | chr2_4:8432084-8432103 | Msa0313120:CDS | 45.0% |
! | AGAAATGTTCCTGTTGGTGG+TGG | + | chr2_4:8432125-8432144 | Msa0313120:CDS | 45.0% |
AGACAGGGAAGAATTCCCTA+AGG | - | chr2_4:8432204-8432223 | None:intergenic | 45.0% | |
TAGGGAATTCTTCCCTGTCT+CGG | + | chr2_4:8432204-8432223 | Msa0313120:CDS | 45.0% | |
! | TGGTTACATGTCGCCTTTTG+CGG | + | chr2_4:8432340-8432359 | Msa0313120:CDS | 45.0% |
! | TGTGCTGAAGAGTGTGTTGA+TGG | - | chr2_4:8432392-8432411 | None:intergenic | 45.0% |
CAGTCTCAGAATGTTGGTGT+TGG | + | chr2_4:8432422-8432441 | Msa0313120:CDS | 45.0% | |
!! | CAGAATGTTGGTGTTGGAGT+TGG | + | chr2_4:8432428-8432447 | Msa0313120:CDS | 45.0% |
GCTCTTGTAAGCTCATCACA+AGG | + | chr2_4:8432512-8432531 | Msa0313120:CDS | 45.0% | |
CGTGGTTCAGAGGTAAACAT+TGG | - | chr2_4:8432590-8432609 | None:intergenic | 45.0% | |
ATGTTTACCTCTGAACCACG+AGG | + | chr2_4:8432590-8432609 | Msa0313120:CDS | 45.0% | |
ATTCAAACCTCGTGGTTCAG+AGG | - | chr2_4:8432600-8432619 | None:intergenic | 45.0% | |
GCAACAGAAGTAGTAGATGG+AGG | - | chr2_4:8432629-8432648 | None:intergenic | 45.0% | |
ACCACTTCAACTAATGGTGG+TGG | + | chr2_4:8432746-8432765 | Msa0313120:CDS | 45.0% | |
TCCACCACCATTAGTTGAAG+TGG | - | chr2_4:8432750-8432769 | None:intergenic | 45.0% | |
!! | ATTAGTGTTGGTGCTGATGC+TGG | + | chr2_4:8432782-8432801 | Msa0313120:CDS | 45.0% |
! | GCAAAACATGCAGAAGGTAC+TGG | + | chr2_4:8432084-8432103 | Msa0313120:CDS | 45.0% |
! | AGAAATGTTCCTGTTGGTGG+TGG | + | chr2_4:8432125-8432144 | Msa0313120:CDS | 45.0% |
AGACAGGGAAGAATTCCCTA+AGG | - | chr2_4:8432204-8432223 | None:intergenic | 45.0% | |
TAGGGAATTCTTCCCTGTCT+CGG | + | chr2_4:8432204-8432223 | Msa0313120:CDS | 45.0% | |
! | TGGTTACATGTCGCCTTTTG+CGG | + | chr2_4:8432340-8432359 | Msa0313120:CDS | 45.0% |
! | TGTGCTGAAGAGTGTGTTGA+TGG | - | chr2_4:8432392-8432411 | None:intergenic | 45.0% |
CAGTCTCAGAATGTTGGTGT+TGG | + | chr2_4:8432422-8432441 | Msa0313120:CDS | 45.0% | |
!! | CAGAATGTTGGTGTTGGAGT+TGG | + | chr2_4:8432428-8432447 | Msa0313120:CDS | 45.0% |
GCTCTTGTAAGCTCATCACA+AGG | + | chr2_4:8432512-8432531 | Msa0313120:CDS | 45.0% | |
CGTGGTTCAGAGGTAAACAT+TGG | - | chr2_4:8432590-8432609 | None:intergenic | 45.0% | |
ATGTTTACCTCTGAACCACG+AGG | + | chr2_4:8432590-8432609 | Msa0313120:CDS | 45.0% | |
ATTCAAACCTCGTGGTTCAG+AGG | - | chr2_4:8432600-8432619 | None:intergenic | 45.0% | |
GCAACAGAAGTAGTAGATGG+AGG | - | chr2_4:8432629-8432648 | None:intergenic | 45.0% | |
ACCACTTCAACTAATGGTGG+TGG | + | chr2_4:8432746-8432765 | Msa0313120:CDS | 45.0% | |
TCCACCACCATTAGTTGAAG+TGG | - | chr2_4:8432750-8432769 | None:intergenic | 45.0% | |
!! | ATTAGTGTTGGTGCTGATGC+TGG | + | chr2_4:8432782-8432801 | Msa0313120:CDS | 45.0% |
ATGGAGCAAGAACGTGGTGA+TGG | + | chr2_4:8431930-8431949 | Msa0313120:CDS | 50.0% | |
!! | AAGAACGTGGTGATGGTGGA+AGG | + | chr2_4:8431937-8431956 | Msa0313120:CDS | 50.0% |
!! | CTAGGACACTTCTGAGGTTG+AGG | - | chr2_4:8431996-8432015 | None:intergenic | 50.0% |
!! | CTCAACCTCAGAAGTGTCCT+AGG | + | chr2_4:8431994-8432013 | Msa0313120:CDS | 50.0% |
TCACACCTAGGACACTTCTG+AGG | - | chr2_4:8432002-8432021 | None:intergenic | 50.0% | |
AGAAGAAACGAGGCTGAGAG+AGG | - | chr2_4:8432064-8432083 | None:intergenic | 50.0% | |
!! | TGCAGAAGGTACTGGACTCA+AGG | + | chr2_4:8432092-8432111 | Msa0313120:CDS | 50.0% |
!! | AGAAGGTACTGGACTCAAGG+TGG | + | chr2_4:8432095-8432114 | Msa0313120:CDS | 50.0% |
TTACGACAACCACCACCAAC+AGG | - | chr2_4:8432137-8432156 | None:intergenic | 50.0% | |
!! | TGTTGGTGGTGGTTGTCGTA+AGG | + | chr2_4:8432136-8432155 | Msa0313120:CDS | 50.0% |
!! | GTTGGTGGTGGTTGTCGTAA+GGG | + | chr2_4:8432137-8432156 | Msa0313120:CDS | 50.0% |
TCGGTTGATTGTGGCAGTGT+TGG | - | chr2_4:8432230-8432249 | None:intergenic | 50.0% | |
GTCAACTGGTCGGTTGATTG+TGG | - | chr2_4:8432239-8432258 | None:intergenic | 50.0% | |
ATCAACCGACCAGTTGACCA+TGG | + | chr2_4:8432241-8432260 | Msa0313120:CDS | 50.0% | |
!!! | GTTTTTAGCCATCGCAGCCA+TGG | - | chr2_4:8432261-8432280 | None:intergenic | 50.0% |
!! | GTTGGTGTTGGAGTTGGTGT+TGG | + | chr2_4:8432434-8432453 | Msa0313120:CDS | 50.0% |
!! | GTTGGAGTTGGTGTTGGTCT+TGG | + | chr2_4:8432440-8432459 | Msa0313120:CDS | 50.0% |
TGAAAGAATTGTTGCGGCGG+TGG | - | chr2_4:8432548-8432567 | None:intergenic | 50.0% | |
!! | GGGTAGTGGATCTGCTTCTT+TGG | + | chr2_4:8432871-8432890 | Msa0313120:CDS | 50.0% |
ATGGAGCAAGAACGTGGTGA+TGG | + | chr2_4:8431930-8431949 | Msa0313120:CDS | 50.0% | |
!! | AAGAACGTGGTGATGGTGGA+AGG | + | chr2_4:8431937-8431956 | Msa0313120:CDS | 50.0% |
!! | CTAGGACACTTCTGAGGTTG+AGG | - | chr2_4:8431996-8432015 | None:intergenic | 50.0% |
!! | CTCAACCTCAGAAGTGTCCT+AGG | + | chr2_4:8431994-8432013 | Msa0313120:CDS | 50.0% |
TCACACCTAGGACACTTCTG+AGG | - | chr2_4:8432002-8432021 | None:intergenic | 50.0% | |
AGAAGAAACGAGGCTGAGAG+AGG | - | chr2_4:8432064-8432083 | None:intergenic | 50.0% | |
!! | TGCAGAAGGTACTGGACTCA+AGG | + | chr2_4:8432092-8432111 | Msa0313120:CDS | 50.0% |
!! | AGAAGGTACTGGACTCAAGG+TGG | + | chr2_4:8432095-8432114 | Msa0313120:CDS | 50.0% |
TTACGACAACCACCACCAAC+AGG | - | chr2_4:8432137-8432156 | None:intergenic | 50.0% | |
!! | TGTTGGTGGTGGTTGTCGTA+AGG | + | chr2_4:8432136-8432155 | Msa0313120:CDS | 50.0% |
!! | GTTGGTGGTGGTTGTCGTAA+GGG | + | chr2_4:8432137-8432156 | Msa0313120:CDS | 50.0% |
TCGGTTGATTGTGGCAGTGT+TGG | - | chr2_4:8432230-8432249 | None:intergenic | 50.0% | |
GTCAACTGGTCGGTTGATTG+TGG | - | chr2_4:8432239-8432258 | None:intergenic | 50.0% | |
ATCAACCGACCAGTTGACCA+TGG | + | chr2_4:8432241-8432260 | Msa0313120:CDS | 50.0% | |
!!! | GTTTTTAGCCATCGCAGCCA+TGG | - | chr2_4:8432261-8432280 | None:intergenic | 50.0% |
!! | GTTGGTGTTGGAGTTGGTGT+TGG | + | chr2_4:8432434-8432453 | Msa0313120:CDS | 50.0% |
!! | GTTGGAGTTGGTGTTGGTCT+TGG | + | chr2_4:8432440-8432459 | Msa0313120:CDS | 50.0% |
TGAAAGAATTGTTGCGGCGG+TGG | - | chr2_4:8432548-8432567 | None:intergenic | 50.0% | |
!! | GGGTAGTGGATCTGCTTCTT+TGG | + | chr2_4:8432871-8432890 | Msa0313120:CDS | 50.0% |
!! | GAGCAAGAACGTGGTGATGG+TGG | + | chr2_4:8431933-8431952 | Msa0313120:CDS | 55.0% |
!! | AGTGTTGGTGCTGATGCTGG+TGG | + | chr2_4:8432785-8432804 | Msa0313120:CDS | 55.0% |
GTAGCGGTGATGTTGCTGCT+GGG | + | chr2_4:8432849-8432868 | Msa0313120:CDS | 55.0% | |
TAGCGGTGATGTTGCTGCTG+GGG | + | chr2_4:8432850-8432869 | Msa0313120:CDS | 55.0% | |
!! | GAGCAAGAACGTGGTGATGG+TGG | + | chr2_4:8431933-8431952 | Msa0313120:CDS | 55.0% |
!! | AGTGTTGGTGCTGATGCTGG+TGG | + | chr2_4:8432785-8432804 | Msa0313120:CDS | 55.0% |
GTAGCGGTGATGTTGCTGCT+GGG | + | chr2_4:8432849-8432868 | Msa0313120:CDS | 55.0% | |
TAGCGGTGATGTTGCTGCTG+GGG | + | chr2_4:8432850-8432869 | Msa0313120:CDS | 55.0% | |
!! | CGTGGTGATGGTGGAAGGAG+AGG | + | chr2_4:8431942-8431961 | Msa0313120:CDS | 60.0% |
!! | TGGCAGTGTTGGCCGAGACA+GGG | - | chr2_4:8432219-8432238 | None:intergenic | 60.0% |
CGCAGCCATGGTCAACTGGT+CGG | - | chr2_4:8432249-8432268 | None:intergenic | 60.0% | |
CCATCGCAGCCATGGTCAAC+TGG | - | chr2_4:8432253-8432272 | None:intergenic | 60.0% | |
CCAGTTGACCATGGCTGCGA+TGG | + | chr2_4:8432250-8432269 | Msa0313120:CDS | 60.0% | |
TGTTGCGGCGGTGGACGATT+CGG | - | chr2_4:8432539-8432558 | None:intergenic | 60.0% | |
GCTGATGCTGGTGGTAGTCG+TGG | + | chr2_4:8432794-8432813 | Msa0313120:CDS | 60.0% | |
GCTGGTGGTAGTCGTGGTGT+TGG | + | chr2_4:8432800-8432819 | Msa0313120:CDS | 60.0% | |
!! | GGTAGTCGTGGTGTTGGTGC+TGG | + | chr2_4:8432806-8432825 | Msa0313120:CDS | 60.0% |
!! | AGTCGTGGTGTTGGTGCTGG+TGG | + | chr2_4:8432809-8432828 | Msa0313120:CDS | 60.0% |
! | GGTAGCGGTGATGTTGCTGC+TGG | + | chr2_4:8432848-8432867 | Msa0313120:CDS | 60.0% |
AGCGGTGATGTTGCTGCTGG+GGG | + | chr2_4:8432851-8432870 | Msa0313120:CDS | 60.0% | |
GATGTTGCTGCTGGGGGTAG+TGG | + | chr2_4:8432857-8432876 | Msa0313120:CDS | 60.0% | |
!! | CGTGGTGATGGTGGAAGGAG+AGG | + | chr2_4:8431942-8431961 | Msa0313120:CDS | 60.0% |
!! | TGGCAGTGTTGGCCGAGACA+GGG | - | chr2_4:8432219-8432238 | None:intergenic | 60.0% |
CGCAGCCATGGTCAACTGGT+CGG | - | chr2_4:8432249-8432268 | None:intergenic | 60.0% | |
CCATCGCAGCCATGGTCAAC+TGG | - | chr2_4:8432253-8432272 | None:intergenic | 60.0% | |
CCAGTTGACCATGGCTGCGA+TGG | + | chr2_4:8432250-8432269 | Msa0313120:CDS | 60.0% | |
TGTTGCGGCGGTGGACGATT+CGG | - | chr2_4:8432539-8432558 | None:intergenic | 60.0% | |
GCTGATGCTGGTGGTAGTCG+TGG | + | chr2_4:8432794-8432813 | Msa0313120:CDS | 60.0% | |
GCTGGTGGTAGTCGTGGTGT+TGG | + | chr2_4:8432800-8432819 | Msa0313120:CDS | 60.0% | |
!! | GGTAGTCGTGGTGTTGGTGC+TGG | + | chr2_4:8432806-8432825 | Msa0313120:CDS | 60.0% |
!! | AGTCGTGGTGTTGGTGCTGG+TGG | + | chr2_4:8432809-8432828 | Msa0313120:CDS | 60.0% |
! | GGTAGCGGTGATGTTGCTGC+TGG | + | chr2_4:8432848-8432867 | Msa0313120:CDS | 60.0% |
AGCGGTGATGTTGCTGCTGG+GGG | + | chr2_4:8432851-8432870 | Msa0313120:CDS | 60.0% | |
GATGTTGCTGCTGGGGGTAG+TGG | + | chr2_4:8432857-8432876 | Msa0313120:CDS | 60.0% | |
!! | GTGGCAGTGTTGGCCGAGAC+AGG | - | chr2_4:8432220-8432239 | None:intergenic | 65.0% |
!! | GTTGGTGCTGGTGGTAGCCG+TGG | + | chr2_4:8432818-8432837 | Msa0313120:CDS | 65.0% |
!! | AGCCGTGGTGCTGGTGGTAG+CGG | + | chr2_4:8432833-8432852 | Msa0313120:CDS | 65.0% |
CACCGCTACCACCAGCACCA+CGG | - | chr2_4:8432838-8432857 | None:intergenic | 65.0% | |
!! | GTGGCAGTGTTGGCCGAGAC+AGG | - | chr2_4:8432220-8432239 | None:intergenic | 65.0% |
!! | GTTGGTGCTGGTGGTAGCCG+TGG | + | chr2_4:8432818-8432837 | Msa0313120:CDS | 65.0% |
!! | AGCCGTGGTGCTGGTGGTAG+CGG | + | chr2_4:8432833-8432852 | Msa0313120:CDS | 65.0% |
CACCGCTACCACCAGCACCA+CGG | - | chr2_4:8432838-8432857 | None:intergenic | 65.0% | |
GCTGGTGGTAGCCGTGGTGC+TGG | + | chr2_4:8432824-8432843 | Msa0313120:CDS | 70.0% | |
! | GGTGGTAGCCGTGGTGCTGG+TGG | + | chr2_4:8432827-8432846 | Msa0313120:CDS | 70.0% |
GCTGGTGGTAGCCGTGGTGC+TGG | + | chr2_4:8432824-8432843 | Msa0313120:CDS | 70.0% | |
! | GGTGGTAGCCGTGGTGCTGG+TGG | + | chr2_4:8432827-8432846 | Msa0313120:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 8431930 | 8432940 | 8431930 | ID=Msa0313120;Name=Msa0313120 |
chr2_4 | mRNA | 8431930 | 8432940 | 8431930 | ID=Msa0313120-mRNA-1;Parent=Msa0313120;Name=Msa0313120-mRNA-1;_AED=0.00;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|336 |
chr2_4 | exon | 8431930 | 8432940 | 8431930 | ID=Msa0313120-mRNA-1:exon:3229;Parent=Msa0313120-mRNA-1 |
chr2_4 | CDS | 8431930 | 8432940 | 8431930 | ID=Msa0313120-mRNA-1:cds;Parent=Msa0313120-mRNA-1 |
Gene Sequence |
Protein sequence |