Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313200 | XP_013448301.1 | 87.464 | 351 | 38 | 2 | 1 | 350 | 1 | 346 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313200 | sp|Q8RWD7|EMB74_ARATH | 38.053 | 113 | 63 | 3 | 22 | 132 | 64 | 171 | 1.90e-16 | 81.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0313200 | TR | Others |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313200 | MtrunA17_Chr7g0231611 | 87.464 | 351 | 38 | 2 | 1 | 350 | 1 | 346 | 0.0 | 624 |
| Msa0313200 | MtrunA17_Chr5g0416851 | 87.749 | 351 | 37 | 2 | 1 | 350 | 1 | 346 | 0.0 | 615 |
| Msa0313200 | MtrunA17_Chr2g0282701 | 85.490 | 255 | 18 | 1 | 96 | 350 | 42 | 277 | 2.88e-148 | 419 |
| Msa0313200 | MtrunA17_Chr1g0182611 | 31.818 | 176 | 102 | 8 | 1 | 166 | 1 | 168 | 6.46e-16 | 78.6 |
| Msa0313200 | MtrunA17_Chr1g0182621 | 35.294 | 119 | 63 | 4 | 22 | 134 | 28 | 138 | 1.84e-14 | 74.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0313200 | AT1G58210.1 | 38.053 | 113 | 63 | 3 | 22 | 132 | 64 | 171 | 1.93e-17 | 81.6 |
Find 107 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATCTTGCATTACTAAT+TGG | 0.196732 | 2_4:-8565612 | Msa0313200:three_prime_UTR |
| CAATTTCTCATTGGGGATTA+GGG | 0.201892 | 2_4:+8569479 | None:intergenic |
| GTTACAGTCTTCAAACTTAA+TGG | 0.211870 | 2_4:-8569443 | Msa0313200:five_prime_UTR |
| TCAATTTCTCATTGGGGATT+AGG | 0.219132 | 2_4:+8569478 | None:intergenic |
| TCCACTTTACGTAAAGAAAT+TGG | 0.221596 | 2_4:-8566117 | Msa0313200:CDS |
| CCTTGTGGTCACTTGATAAT+TGG | 0.239096 | 2_4:+8566087 | None:intergenic |
| GTGTGGTGGTGGAACGTATT+GGG | 0.250160 | 2_4:+8567995 | None:intergenic |
| GGTGGAACGTATTGGGGTTT+TGG | 0.271264 | 2_4:+8568002 | None:intergenic |
| GATGTAGTGTTCATAGGATT+TGG | 0.289442 | 2_4:-8565813 | Msa0313200:three_prime_UTR |
| GTGGACGTTGTTATAACTAT+TGG | 0.292134 | 2_4:-8565646 | Msa0313200:three_prime_UTR |
| TCCAATTTCTTTACGTAAAG+TGG | 0.301497 | 2_4:+8566116 | None:intergenic |
| TGGACGTTGTTATAACTATT+GGG | 0.301859 | 2_4:-8565645 | Msa0313200:three_prime_UTR |
| CCAAGGTACTTGCTTCTTGA+TGG | 0.302718 | 2_4:-8569543 | Msa0313200:five_prime_UTR |
| GTGATTTATAATGGTGAAAA+TGG | 0.304153 | 2_4:-8566440 | Msa0313200:CDS |
| CAGTTGGATTTCCACACAAT+TGG | 0.315477 | 2_4:-8566634 | Msa0313200:CDS |
| GAAGCAAACTCTAAAACTTA+TGG | 0.322704 | 2_4:+8565748 | None:intergenic |
| CAGTATCTCAATTTCTCATT+GGG | 0.329990 | 2_4:+8569471 | None:intergenic |
| TTTAGATTTGAAGATTGAAT+TGG | 0.330031 | 2_4:+8567966 | None:intergenic |
| GTGATTTCTAATGGTGAAAA+TGG | 0.338731 | 2_4:-8566230 | Msa0313200:CDS |
| GCCTCACATACATCTCAAAA+TGG | 0.350427 | 2_4:-8567582 | Msa0313200:CDS |
| TGTGGTGGTGGAACGTATTG+GGG | 0.352785 | 2_4:+8567996 | None:intergenic |
| CAAGTTGGCGTGATTTATAA+TGG | 0.357302 | 2_4:-8566449 | Msa0313200:CDS |
| GGCCTTTGGAATGTTCAAAT+TGG | 0.361861 | 2_4:-8565789 | Msa0313200:three_prime_UTR |
| TGCAAGGGTTTAGCTCTTGC+TGG | 0.372413 | 2_4:-8567807 | Msa0313200:CDS |
| TCATAGGATTTGGAGGCCTT+TGG | 0.372772 | 2_4:-8565803 | Msa0313200:three_prime_UTR |
| GGTGTGGTGGTGGAACGTAT+TGG | 0.373524 | 2_4:+8567994 | None:intergenic |
| AATTATTCAGCTCATAGTTC+AGG | 0.376079 | 2_4:-8566608 | Msa0313200:CDS |
| GCTAAACCCTTGCATTGGTT+TGG | 0.379957 | 2_4:+8567816 | None:intergenic |
| AGCAGCTGATGAAACTTTGC+AGG | 0.381501 | 2_4:-8566375 | Msa0313200:CDS |
| GCAGTATCTCAATTTCTCAT+TGG | 0.384354 | 2_4:+8569470 | None:intergenic |
| AAGTCACATGATGCTTATAA+AGG | 0.387819 | 2_4:-8565982 | Msa0313200:CDS |
| TGAAACTTTGCAGGAAGATA+TGG | 0.392140 | 2_4:-8566366 | Msa0313200:CDS |
| TATACAGATGTAGTGTTCAT+AGG | 0.398073 | 2_4:-8565819 | Msa0313200:three_prime_UTR |
| ATTGGAGAGGGGTGTGGTGG+TGG | 0.398083 | 2_4:+8567984 | None:intergenic |
| TCTTGCTGGCATTGCTTCAA+TGG | 0.402134 | 2_4:-8567793 | Msa0313200:CDS |
| ATACCGGTAACTTGTGTAGT+AGG | 0.407561 | 2_4:-8566031 | Msa0313200:CDS |
| ACATCAATATTGCGAGTCTA+AGG | 0.411507 | 2_4:-8566484 | Msa0313200:CDS |
| CAGGTTGCCGTGATTTCTAA+TGG | 0.414513 | 2_4:-8566239 | Msa0313200:CDS |
| CACCCTACTACACAAGTTAC+CGG | 0.426920 | 2_4:+8566028 | None:intergenic |
| GCTGTTTACGATTATTCTGT+TGG | 0.430560 | 2_4:-8565885 | Msa0313200:three_prime_UTR |
| GGGTCTTAAGTTGTCTCAAC+AGG | 0.433791 | 2_4:-8566318 | Msa0313200:CDS |
| CCCATGAGCCAGGCAGTGTT+AGG | 0.434002 | 2_4:-8566142 | Msa0313200:CDS |
| GAACACGTGGATAAAGTTAC+TGG | 0.442596 | 2_4:-8566575 | Msa0313200:CDS |
| AAACCCTTGCATTGGTTTGG+AGG | 0.442882 | 2_4:+8567819 | None:intergenic |
| ATCTTGAGTCTCTACAACAT+TGG | 0.448912 | 2_4:+8567638 | None:intergenic |
| GCAATGTTGTCATTACCTTC+AGG | 0.449864 | 2_4:+8566341 | None:intergenic |
| GAAGGTAATGACAACATTGC+GGG | 0.450334 | 2_4:-8566338 | Msa0313200:CDS |
| GTTGTCTCAACAGGAAGATA+TGG | 0.457391 | 2_4:-8566309 | Msa0313200:CDS |
| ACCCTGGTAGATCTTCTAAC+AGG | 0.457573 | 2_4:+8565927 | None:intergenic |
| CACATGATGCTTATAAAGGA+TGG | 0.459002 | 2_4:-8565978 | Msa0313200:CDS |
| TCTTGAGTCTCTACAACATT+GGG | 0.460912 | 2_4:+8567639 | None:intergenic |
| TGCATTACTAATTGGTGCAC+TGG | 0.461301 | 2_4:-8565604 | Msa0313200:three_prime_UTR |
| TTTGAAGATTGAATTGGAGA+GGG | 0.468685 | 2_4:+8567972 | None:intergenic |
| CGGTTTGAAGATCAAAGCTT+CGG | 0.470061 | 2_4:-8568329 | Msa0313200:intron |
| GCAATGTTGTCATTACCTTC+CGG | 0.470555 | 2_4:+8566284 | None:intergenic |
| ACCTAACACTGCCTGGCTCA+TGG | 0.480484 | 2_4:+8566141 | None:intergenic |
| CTCCTGTTAGAAGATCTACC+AGG | 0.486292 | 2_4:-8565929 | Msa0313200:CDS |
| TTATGTCGCCGTTTCTCAGT+TGG | 0.496930 | 2_4:-8566650 | Msa0313200:CDS |
| TGATACATTTCTTATCCTTG+TGG | 0.504839 | 2_4:+8566072 | None:intergenic |
| CAAACTTAATGGCAACAGTA+AGG | 0.506638 | 2_4:-8569432 | Msa0313200:intron |
| AGACACCGCGTAAGAGAAGT+TGG | 0.509501 | 2_4:-8569608 | Msa0313200:five_prime_UTR |
| GTAATGCAAGATTGAAGTTG+TGG | 0.518325 | 2_4:+8565619 | None:intergenic |
| ATTTCTCATTGGGGATTAGG+GGG | 0.521839 | 2_4:+8569481 | None:intergenic |
| GAAGATCAAAGCTTCGGAAA+CGG | 0.523319 | 2_4:-8568323 | Msa0313200:intron |
| TCTTGATTTGTCTCAACCGC+AGG | 0.524079 | 2_4:-8566258 | Msa0313200:CDS |
| AATTTCTCATTGGGGATTAG+GGG | 0.525370 | 2_4:+8569480 | None:intergenic |
| CCTAACACTGCCTGGCTCAT+GGG | 0.526114 | 2_4:+8566142 | None:intergenic |
| CAAGAGCTAAACCCTTGCAT+TGG | 0.528805 | 2_4:+8567811 | None:intergenic |
| GATTGAATTGGAGAGGGGTG+TGG | 0.530158 | 2_4:+8567978 | None:intergenic |
| TGAATTGGAGAGGGGTGTGG+TGG | 0.536125 | 2_4:+8567981 | None:intergenic |
| TTGAAGATTGAATTGGAGAG+GGG | 0.536985 | 2_4:+8567973 | None:intergenic |
| TCAACAGGAAGATATGGAAC+CGG | 0.540435 | 2_4:-8566303 | Msa0313200:CDS |
| TTTGATCCTACCCATGAGCC+AGG | 0.541769 | 2_4:-8566152 | Msa0313200:CDS |
| AAGAAGAATGTAGATGATAC+CGG | 0.549093 | 2_4:-8566047 | Msa0313200:CDS |
| AGTGGAGACCTAACACTGCC+TGG | 0.549411 | 2_4:+8566134 | None:intergenic |
| GTGGAAATCCAACTGAGAAA+CGG | 0.556021 | 2_4:+8566642 | None:intergenic |
| GTAGTGTTCATAGGATTTGG+AGG | 0.556826 | 2_4:-8565810 | Msa0313200:three_prime_UTR |
| TATGTCGCTCGCTGCATCCA+AGG | 0.559906 | 2_4:-8569560 | Msa0313200:five_prime_UTR |
| ATTTGAAGATTGAATTGGAG+AGG | 0.566480 | 2_4:+8567971 | None:intergenic |
| ACATGATGCTTATAAAGGAT+GGG | 0.566978 | 2_4:-8565977 | Msa0313200:CDS |
| CTTATGGAATATGCTTCTTG+AGG | 0.573377 | 2_4:+8565764 | None:intergenic |
| GGCATCACTGTAATGTTCCA+CGG | 0.577101 | 2_4:-8567615 | Msa0313200:CDS |
| CCATCAAGAAGCAAGTACCT+TGG | 0.579568 | 2_4:+8569543 | None:intergenic |
| GGACGTTGTTATAACTATTG+GGG | 0.584608 | 2_4:-8565644 | Msa0313200:three_prime_UTR |
| TTATAAATCACGCCAACTTG+AGG | 0.591187 | 2_4:+8566452 | None:intergenic |
| TTACTAATTGGTGCACTGGT+TGG | 0.596843 | 2_4:-8565600 | Msa0313200:three_prime_UTR |
| CATCGACAAGAAAATCAGAA+TGG | 0.597549 | 2_4:-8568028 | Msa0313200:intron |
| CACCAATTTGAACATTCCAA+AGG | 0.601473 | 2_4:+8565787 | None:intergenic |
| AGTATCTCAATTTCTCATTG+GGG | 0.603616 | 2_4:+8569472 | None:intergenic |
| TACCGGTAACTTGTGTAGTA+GGG | 0.605302 | 2_4:-8566030 | Msa0313200:CDS |
| GAAACCTCCAAACCAATGCA+AGG | 0.605866 | 2_4:-8567823 | Msa0313200:CDS |
| ACACTGCCTGGCTCATGGGT+AGG | 0.608929 | 2_4:+8566146 | None:intergenic |
| CCAATTATCAAGTGACCACA+AGG | 0.618748 | 2_4:-8566087 | Msa0313200:CDS |
| CAGGAAGATATGGAACCTGA+AGG | 0.622434 | 2_4:-8566356 | Msa0313200:CDS |
| AAACCTCCAAACCAATGCAA+GGG | 0.637222 | 2_4:-8567822 | Msa0313200:CDS |
| AGGTTGTCTCAACCTCAAGT+TGG | 0.639538 | 2_4:-8566464 | Msa0313200:CDS |
| GAGACCTCACAGGAAGCTGA+AGG | 0.643008 | 2_4:-8566509 | Msa0313200:CDS |
| AACAGCTGATGAGACCTCAC+AGG | 0.646895 | 2_4:-8566519 | Msa0313200:CDS |
| GTTACCTTCAGCTTCCTGTG+AGG | 0.652138 | 2_4:+8566505 | None:intergenic |
| AATGTTGTAGAGACTCAAGA+TGG | 0.656225 | 2_4:-8567636 | Msa0313200:CDS |
| CAGGAAGATATGGAACCGGA+AGG | 0.662654 | 2_4:-8566299 | Msa0313200:CDS |
| AGGAAATGAATGTGAACACG+TGG | 0.663886 | 2_4:-8566588 | Msa0313200:CDS |
| TCCTGTTAGAAGATCTACCA+GGG | 0.668456 | 2_4:-8565928 | Msa0313200:CDS |
| TTAGAAATCACGGCAACCTG+CGG | 0.679371 | 2_4:+8566242 | None:intergenic |
| TGAAGGTAATGACAACATTG+CGG | 0.680073 | 2_4:-8566339 | Msa0313200:CDS |
| TCTCTCCAACTTCTCTTACG+CGG | 0.700824 | 2_4:+8569603 | None:intergenic |
| GTGAGGCGTTAATCAAACCG+TGG | 0.715788 | 2_4:+8567598 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTATATTTATTTTAATAG+AGG | + | chr2_4:8567975-8567994 | None:intergenic | 10.0% |
| !! | TCTATTTAATTAAATAAGTC+AGG | + | chr2_4:8566616-8566635 | None:intergenic | 15.0% |
| !! | AATTGAAAAAGTTCTATTAT+CGG | + | chr2_4:8567036-8567055 | None:intergenic | 15.0% |
| !! | ATTTGAGTAAAAATCAAATT+TGG | - | chr2_4:8567869-8567888 | Msa0313200:intron | 15.0% |
| !! | ATGAAATAAGTATCATCATT+TGG | + | chr2_4:8566007-8566026 | None:intergenic | 20.0% |
| !! | AATCATGCATTTAGAAAAAT+AGG | + | chr2_4:8566356-8566375 | None:intergenic | 20.0% |
| !! | TAATTAAATAAGTCAGGTTA+AGG | + | chr2_4:8566610-8566629 | None:intergenic | 20.0% |
| !!! | TTTTCTTTCTTTCTTTTCTT+TGG | + | chr2_4:8566755-8566774 | None:intergenic | 20.0% |
| !! | ATCAATTGAAATAAAAGACA+TGG | + | chr2_4:8566919-8566938 | None:intergenic | 20.0% |
| !! | TTTAGATTTGAAGATTGAAT+TGG | + | chr2_4:8567229-8567248 | None:intergenic | 20.0% |
| !!! | TTTTTTCATTTTCACTTTGT+AGG | - | chr2_4:8567428-8567447 | Msa0313200:intron | 20.0% |
| !! | TTTCTAATTGGTTATTTGTT+TGG | - | chr2_4:8567451-8567470 | Msa0313200:intron | 20.0% |
| !! | TTCTAATTGGTTATTTGTTT+GGG | - | chr2_4:8567452-8567471 | Msa0313200:intron | 20.0% |
| !! | TTGAATATAATTAGTGTGTT+TGG | - | chr2_4:8567728-8567747 | Msa0313200:intron | 20.0% |
| !!! | TTTTTGCATCAAATTTTCTT+TGG | + | chr2_4:8568075-8568094 | None:intergenic | 20.0% |
| !! | ACAAAATAAAACTGAATGAT+TGG | + | chr2_4:8568275-8568294 | None:intergenic | 20.0% |
| !! | AAAATACACATAATCTTCAA+TGG | - | chr2_4:8568438-8568457 | Msa0313200:intron | 20.0% |
| !!! | TTTTTTATAATTTAGTACCC+TGG | + | chr2_4:8569284-8569303 | None:intergenic | 20.0% |
| !! | ATTGTTTCTTAACATATGGA+TGG | - | chr2_4:8565791-8565810 | Msa0313200:three_prime_UTR | 25.0% |
| ! | ACAAAATTACTGATGAAGTT+TGG | + | chr2_4:8565930-8565949 | None:intergenic | 25.0% |
| ! | TAAGTAATCAAAGCCTTAAT+AGG | - | chr2_4:8566550-8566569 | Msa0313200:CDS | 25.0% |
| !!! | CCTATTTAAAGTTTAGCTTT+TGG | + | chr2_4:8566676-8566695 | None:intergenic | 25.0% |
| ! | CCAAAAGCTAAACTTTAAAT+AGG | - | chr2_4:8566673-8566692 | Msa0313200:intron | 25.0% |
| !! | TTTTCTTTGGATAACCATTA+GGG | + | chr2_4:8566742-8566761 | None:intergenic | 25.0% |
| ! | AAAGACGAAAATAACAAAAG+CGG | + | chr2_4:8566793-8566812 | None:intergenic | 25.0% |
| ! | AATGACAACAAATGAGATAA+TGG | + | chr2_4:8567086-8567105 | None:intergenic | 25.0% |
| ! | ATCTACAAAAATAAGCAAGT+AGG | + | chr2_4:8567325-8567344 | None:intergenic | 25.0% |
| !! | TGTAGATTTTCTTACATGAA+TGG | - | chr2_4:8567338-8567357 | Msa0313200:intron | 25.0% |
| ! | AGAGAAATGAGAAAGAAAAA+GGG | + | chr2_4:8567657-8567676 | None:intergenic | 25.0% |
| ! | AAGAGAAATGAGAAAGAAAA+AGG | + | chr2_4:8567658-8567677 | None:intergenic | 25.0% |
| ! | GACAAAGTTAGCAAAAATAT+AGG | + | chr2_4:8568310-8568329 | None:intergenic | 25.0% |
| !! | AACCCAAAATCTATACTTTT+TGG | - | chr2_4:8568391-8568410 | Msa0313200:intron | 25.0% |
| !!! | TGCCAAAAAGTATAGATTTT+GGG | + | chr2_4:8568396-8568415 | None:intergenic | 25.0% |
| !!! | TTGCCAAAAAGTATAGATTT+TGG | + | chr2_4:8568397-8568416 | None:intergenic | 25.0% |
| ! | AAATTAAATGCGTCAATAAC+AGG | + | chr2_4:8568494-8568513 | None:intergenic | 25.0% |
| !!! | TATTGACGCATTTAATTTTC+TGG | - | chr2_4:8568496-8568515 | Msa0313200:intron | 25.0% |
| !! | GAATAATTTTTCCAATTGTG+TGG | + | chr2_4:8568572-8568591 | None:intergenic | 25.0% |
| ! | GTGATTTATAATGGTGAAAA+TGG | - | chr2_4:8568752-8568771 | Msa0313200:intron | 25.0% |
| !! | ATTTTCACCATTAGAAATCA+CGG | + | chr2_4:8568963-8568982 | None:intergenic | 25.0% |
| ! | TAATTCAACAACCCAAAAAA+GGG | + | chr2_4:8569483-8569502 | None:intergenic | 25.0% |
| ! | TTAATTCAACAACCCAAAAA+AGG | + | chr2_4:8569484-8569503 | None:intergenic | 25.0% |
| !!! | ATTTTTTGATTTTGTCATCG+TGG | - | chr2_4:8569527-8569546 | Msa0313200:five_prime_UTR | 25.0% |
| ! | TTCAATCTTGCATTACTAAT+TGG | - | chr2_4:8569580-8569599 | Msa0313200:five_prime_UTR | 25.0% |
| AGTATCTCAATTTCTCATTG+GGG | + | chr2_4:8565723-8565742 | None:intergenic | 30.0% | |
| CAGTATCTCAATTTCTCATT+GGG | + | chr2_4:8565724-8565743 | None:intergenic | 30.0% | |
| GTTACAGTCTTCAAACTTAA+TGG | - | chr2_4:8565749-8565768 | Msa0313200:three_prime_UTR | 30.0% | |
| ! | GCTCATTGTTTCTTAACATA+TGG | - | chr2_4:8565787-8565806 | Msa0313200:three_prime_UTR | 30.0% |
| ! | ATGTCATGTTGTCATGTTTT+GGG | + | chr2_4:8566127-8566146 | None:intergenic | 30.0% |
| !!! | TGCTTGTCTTGTTTTTATTC+TGG | - | chr2_4:8566213-8566232 | Msa0313200:CDS | 30.0% |
| !!! | TTGTCTTGTTTTTATTCTGG+AGG | - | chr2_4:8566216-8566235 | Msa0313200:CDS | 30.0% |
| ! | TGTTTGATTTATGAGCCTAA+TGG | - | chr2_4:8566388-8566407 | Msa0313200:CDS | 30.0% |
| ! | GTTTGATTTATGAGCCTAAT+GGG | - | chr2_4:8566389-8566408 | Msa0313200:CDS | 30.0% |
| TGATTACTTAAAGTCAGAGA+GGG | + | chr2_4:8566458-8566477 | None:intergenic | 30.0% | |
| TTGATTACTTAAAGTCAGAG+AGG | + | chr2_4:8566459-8566478 | None:intergenic | 30.0% | |
| TAATCAAAGCCTTAATAGGT+CGG | - | chr2_4:8566554-8566573 | Msa0313200:CDS | 30.0% | |
| AGCTAAACTTTAAATAGGCT+AGG | - | chr2_4:8566678-8566697 | Msa0313200:intron | 30.0% | |
| TTTCTTTGGATAACCATTAG+GGG | + | chr2_4:8566741-8566760 | None:intergenic | 30.0% | |
| ! | CTTTTCTTTGGATAACCATT+AGG | + | chr2_4:8566743-8566762 | None:intergenic | 30.0% |
| AAGACGAAAATAACAAAAGC+GGG | + | chr2_4:8566792-8566811 | None:intergenic | 30.0% | |
| TTCTCTTCCATTCTTTCATA+CGG | - | chr2_4:8566843-8566862 | Msa0313200:intron | 30.0% | |
| ATAAGCGCATAAAAAAGAAG+GGG | + | chr2_4:8566975-8566994 | None:intergenic | 30.0% | |
| GATAAGCGCATAAAAAAGAA+GGG | + | chr2_4:8566976-8566995 | None:intergenic | 30.0% | |
| TGATAAGCGCATAAAAAAGA+AGG | + | chr2_4:8566977-8566996 | None:intergenic | 30.0% | |
| TCTCATCATATCATGTCTAT+TGG | - | chr2_4:8567055-8567074 | Msa0313200:intron | 30.0% | |
| TTTGAAGATTGAATTGGAGA+GGG | + | chr2_4:8567223-8567242 | None:intergenic | 30.0% | |
| ATTTGAAGATTGAATTGGAG+AGG | + | chr2_4:8567224-8567243 | None:intergenic | 30.0% | |
| ! | AGATTTTCTTACATGAATGG+TGG | - | chr2_4:8567341-8567360 | Msa0313200:intron | 30.0% |
| TCACTTTGTAGGTTTCTAAT+TGG | - | chr2_4:8567439-8567458 | Msa0313200:intron | 30.0% | |
| ! | TCAAAATGGTTTTTCTTCTG+AGG | - | chr2_4:8567624-8567643 | Msa0313200:CDS | 30.0% |
| AAGCAAACACACACTTAAAA+AGG | + | chr2_4:8568145-8568164 | None:intergenic | 30.0% | |
| TGATTGGTAAACCTCAATTA+TGG | + | chr2_4:8568259-8568278 | None:intergenic | 30.0% | |
| TTTGGCAAAATCAATTCTGT+TGG | - | chr2_4:8568409-8568428 | Msa0313200:intron | 30.0% | |
| AATTATTCAGCTCATAGTTC+AGG | - | chr2_4:8568584-8568603 | Msa0313200:intron | 30.0% | |
| GTGATTTCTAATGGTGAAAA+TGG | - | chr2_4:8568962-8568981 | Msa0313200:intron | 30.0% | |
| TCCACTTTACGTAAAGAAAT+TGG | - | chr2_4:8569075-8569094 | Msa0313200:intron | 30.0% | |
| TCCAATTTCTTTACGTAAAG+TGG | + | chr2_4:8569079-8569098 | None:intergenic | 30.0% | |
| TGATACATTTCTTATCCTTG+TGG | + | chr2_4:8569123-8569142 | None:intergenic | 30.0% | |
| AAGAAGAATGTAGATGATAC+CGG | - | chr2_4:8569145-8569164 | Msa0313200:intron | 30.0% | |
| AAGTCACATGATGCTTATAA+AGG | - | chr2_4:8569210-8569229 | Msa0313200:intron | 30.0% | |
| ACATGATGCTTATAAAGGAT+GGG | - | chr2_4:8569215-8569234 | Msa0313200:intron | 30.0% | |
| ATCCCAACAGAAAAATTAGT+TGG | - | chr2_4:8569336-8569355 | Msa0313200:intron | 30.0% | |
| ! | AGCCAACTAATTTTTCTGTT+GGG | + | chr2_4:8569341-8569360 | None:intergenic | 30.0% |
| ! | AAGCCAACTAATTTTTCTGT+TGG | + | chr2_4:8569342-8569361 | None:intergenic | 30.0% |
| TATACAGATGTAGTGTTCAT+AGG | - | chr2_4:8569373-8569392 | Msa0313200:intron | 30.0% | |
| !! | GAAGCAAACTCTAAAACTTA+TGG | + | chr2_4:8569447-8569466 | None:intergenic | 30.0% |
| !!! | TTTATTTACAGCCCCTTTTT+TGG | - | chr2_4:8569468-8569487 | Msa0313200:five_prime_UTR | 30.0% |
| !!! | TTATTTACAGCCCCTTTTTT+GGG | - | chr2_4:8569469-8569488 | Msa0313200:five_prime_UTR | 30.0% |
| AATTCAACAACCCAAAAAAG+GGG | + | chr2_4:8569482-8569501 | None:intergenic | 30.0% | |
| TGGACGTTGTTATAACTATT+GGG | - | chr2_4:8569547-8569566 | Msa0313200:five_prime_UTR | 30.0% | |
| AATTTCTCATTGGGGATTAG+GGG | + | chr2_4:8565715-8565734 | None:intergenic | 35.0% | |
| CAATTTCTCATTGGGGATTA+GGG | + | chr2_4:8565716-8565735 | None:intergenic | 35.0% | |
| TCAATTTCTCATTGGGGATT+AGG | + | chr2_4:8565717-8565736 | None:intergenic | 35.0% | |
| GCAGTATCTCAATTTCTCAT+TGG | + | chr2_4:8565725-8565744 | None:intergenic | 35.0% | |
| CAAACTTAATGGCAACAGTA+AGG | - | chr2_4:8565760-8565779 | Msa0313200:three_prime_UTR | 35.0% | |
| ATATGGATGGATAGTTAGTG+TGG | - | chr2_4:8565804-8565823 | Msa0313200:three_prime_UTR | 35.0% | |
| TTGAGTTATCAACCTTGTGT+TGG | - | chr2_4:8565950-8565969 | Msa0313200:CDS | 35.0% | |
| ATGATCTACATTCCAACACA+AGG | + | chr2_4:8565965-8565984 | None:intergenic | 35.0% | |
| TAGTGAGTTTCTCAAACTGT+TGG | - | chr2_4:8566064-8566083 | Msa0313200:CDS | 35.0% | |
| ! | CATGTCATGTTGTCATGTTT+TGG | + | chr2_4:8566128-8566147 | None:intergenic | 35.0% |
| TCCAAACTGCGTGATTATAT+CGG | + | chr2_4:8566176-8566195 | None:intergenic | 35.0% | |
| !!! | AGCCTGTCTTGTTTTGATTT+TGG | - | chr2_4:8566305-8566324 | Msa0313200:CDS | 35.0% |
| AGCCAAAATCAAAACAAGAC+AGG | + | chr2_4:8566310-8566329 | None:intergenic | 35.0% | |
| ! | AATCAAAGCCTTTTGTTGAC+TGG | - | chr2_4:8566473-8566492 | Msa0313200:CDS | 35.0% |
| AAAGAGAACCAGTCAACAAA+AGG | + | chr2_4:8566484-8566503 | None:intergenic | 35.0% | |
| ATCACTGAATTAAGCATGAC+AGG | + | chr2_4:8566510-8566529 | None:intergenic | 35.0% | |
| CTTTAAATAGGCTAGGTCAT+AGG | - | chr2_4:8566685-8566704 | Msa0313200:intron | 35.0% | |
| CTTCAAACCGTATGAAAGAA+TGG | + | chr2_4:8566853-8566872 | None:intergenic | 35.0% | |
| GAAATTGAAGAAAGTCTGTG+AGG | + | chr2_4:8567014-8567033 | None:intergenic | 35.0% | |
| !!! | ACTTTTTTGCTGAACTGACT+CGG | - | chr2_4:8567128-8567147 | Msa0313200:intron | 35.0% |
| CATCGACAAGAAAATCAGAA+TGG | - | chr2_4:8567164-8567183 | Msa0313200:intron | 35.0% | |
| TTGAAGATTGAATTGGAGAG+GGG | + | chr2_4:8567222-8567241 | None:intergenic | 35.0% | |
| GAAACAAGAGAAGAGTGAAT+GGG | + | chr2_4:8567261-8567280 | None:intergenic | 35.0% | |
| AGAAACAAGAGAAGAGTGAA+TGG | + | chr2_4:8567262-8567281 | None:intergenic | 35.0% | |
| TCTTGAGTCTCTACAACATT+GGG | + | chr2_4:8567556-8567575 | None:intergenic | 35.0% | |
| ATCTTGAGTCTCTACAACAT+TGG | + | chr2_4:8567557-8567576 | None:intergenic | 35.0% | |
| AATGTTGTAGAGACTCAAGA+TGG | - | chr2_4:8567556-8567575 | Msa0313200:intron | 35.0% | |
| !!! | ACCATTTTGAGATGTATGTG+AGG | + | chr2_4:8567614-8567633 | None:intergenic | 35.0% |
| !! | AAATGGTTTTTCTTCTGAGG+TGG | - | chr2_4:8567627-8567646 | Msa0313200:CDS | 35.0% |
| !!! | AATGGTTTTTCTTCTGAGGT+GGG | - | chr2_4:8567628-8567647 | Msa0313200:CDS | 35.0% |
| !! | TAGTGTCTGGAATCACTTTT+AGG | - | chr2_4:8567949-8567968 | Msa0313200:intron | 35.0% |
| TGTGTTTGCTTCATGTTCAA+GGG | - | chr2_4:8568154-8568173 | Msa0313200:intron | 35.0% | |
| ! | AATTATGGTTTGTGTGGAGT+CGG | + | chr2_4:8568244-8568263 | None:intergenic | 35.0% |
| ! | AACCTCAATTATGGTTTGTG+TGG | + | chr2_4:8568250-8568269 | None:intergenic | 35.0% |
| ! | CAAACATGAGATTTAGAGTC+TGG | - | chr2_4:8568351-8568370 | Msa0313200:intron | 35.0% |
| !!! | CTCATCAGCTGTTTTTTTGT+GGG | + | chr2_4:8568666-8568685 | None:intergenic | 35.0% |
| !!! | TCTCATCAGCTGTTTTTTTG+TGG | + | chr2_4:8568667-8568686 | None:intergenic | 35.0% |
| ACATCAATATTGCGAGTCTA+AGG | - | chr2_4:8568708-8568727 | Msa0313200:intron | 35.0% | |
| TTATAAATCACGCCAACTTG+AGG | + | chr2_4:8568743-8568762 | None:intergenic | 35.0% | |
| ! | CAAGTTGGCGTGATTTATAA+TGG | - | chr2_4:8568743-8568762 | Msa0313200:intron | 35.0% |
| !!! | TTCATCAGCTGCTTTTTTGT+GGG | + | chr2_4:8568810-8568829 | None:intergenic | 35.0% |
| !!! | TTTCATCAGCTGCTTTTTTG+TGG | + | chr2_4:8568811-8568830 | None:intergenic | 35.0% |
| TGAAACTTTGCAGGAAGATA+TGG | - | chr2_4:8568826-8568845 | Msa0313200:intron | 35.0% | |
| TGAAGGTAATGACAACATTG+CGG | - | chr2_4:8568853-8568872 | Msa0313200:intron | 35.0% | |
| ! | AAGCATCATGTGACTTTTCT+TGG | + | chr2_4:8569206-8569225 | None:intergenic | 35.0% |
| CACATGATGCTTATAAAGGA+TGG | - | chr2_4:8569214-8569233 | Msa0313200:intron | 35.0% | |
| GCTGTTTACGATTATTCTGT+TGG | - | chr2_4:8569307-8569326 | Msa0313200:intron | 35.0% | |
| GATGTAGTGTTCATAGGATT+TGG | - | chr2_4:8569379-8569398 | Msa0313200:intron | 35.0% | |
| CACCAATTTGAACATTCCAA+AGG | + | chr2_4:8569408-8569427 | None:intergenic | 35.0% | |
| CTTATGGAATATGCTTCTTG+AGG | + | chr2_4:8569431-8569450 | None:intergenic | 35.0% | |
| GTGGACGTTGTTATAACTAT+TGG | - | chr2_4:8569546-8569565 | Msa0313200:five_prime_UTR | 35.0% | |
| GGACGTTGTTATAACTATTG+GGG | - | chr2_4:8569548-8569567 | Msa0313200:five_prime_UTR | 35.0% | |
| GTAATGCAAGATTGAAGTTG+TGG | + | chr2_4:8569576-8569595 | None:intergenic | 35.0% | |
| ATTTCTCATTGGGGATTAGG+GGG | + | chr2_4:8565714-8565733 | None:intergenic | 40.0% | |
| ACCGATATAATCACGCAGTT+TGG | - | chr2_4:8566172-8566191 | Msa0313200:CDS | 40.0% | |
| CTACCAAGCGCACAAAAAAA+TGG | - | chr2_4:8566421-8566440 | Msa0313200:CDS | 40.0% | |
| !!! | TTGCCATTTTTTTGTGCGCT+TGG | + | chr2_4:8566427-8566446 | None:intergenic | 40.0% |
| AAATGTTAAGCCGTCCGATA+GGG | + | chr2_4:8566713-8566732 | None:intergenic | 40.0% | |
| AAAATGTTAAGCCGTCCGAT+AGG | + | chr2_4:8566714-8566733 | None:intergenic | 40.0% | |
| ! | TAACATTTTCCCACCCCTAA+TGG | - | chr2_4:8566725-8566744 | Msa0313200:intron | 40.0% |
| TTTGGATAACCATTAGGGGT+GGG | + | chr2_4:8566737-8566756 | None:intergenic | 40.0% | |
| CGGTTTGAAGATCAAAGCTT+CGG | - | chr2_4:8566863-8566882 | Msa0313200:intron | 40.0% | |
| GAAGATCAAAGCTTCGGAAA+CGG | - | chr2_4:8566869-8566888 | Msa0313200:intron | 40.0% | |
| AAAGAAGGGGAATCAGAATC+AGG | + | chr2_4:8566962-8566981 | None:intergenic | 40.0% | |
| AAACCTCCAAACCAATGCAA+GGG | - | chr2_4:8567370-8567389 | Msa0313200:intron | 40.0% | |
| TTGTGACTATTGATGCATGC+AGG | - | chr2_4:8567485-8567504 | Msa0313200:intron | 40.0% | |
| GCCTCACATACATCTCAAAA+TGG | - | chr2_4:8567610-8567629 | Msa0313200:CDS | 40.0% | |
| ATTTCTCTTGACCCATCTCT+GGG | - | chr2_4:8567669-8567688 | Msa0313200:CDS | 40.0% | |
| TGAGAGTCATGTGGCAAAAA+TGG | - | chr2_4:8567757-8567776 | Msa0313200:intron | 40.0% | |
| GTGTGTTTGCTTCATGTTCA+AGG | - | chr2_4:8568153-8568172 | Msa0313200:intron | 40.0% | |
| ! | GAACTTTGAAGGCTATCACT+TGG | + | chr2_4:8568214-8568233 | None:intergenic | 40.0% |
| TCGGTGTGTTAGAACTTTGA+AGG | + | chr2_4:8568225-8568244 | None:intergenic | 40.0% | |
| CTCCACACAAACCATAATTG+AGG | - | chr2_4:8568245-8568264 | Msa0313200:intron | 40.0% | |
| GTGGAAATCCAACTGAGAAA+CGG | + | chr2_4:8568553-8568572 | None:intergenic | 40.0% | |
| CAGTTGGATTTCCACACAAT+TGG | - | chr2_4:8568558-8568577 | Msa0313200:intron | 40.0% | |
| AGGAAATGAATGTGAACACG+TGG | - | chr2_4:8568604-8568623 | Msa0313200:intron | 40.0% | |
| GAACACGTGGATAAAGTTAC+TGG | - | chr2_4:8568617-8568636 | Msa0313200:intron | 40.0% | |
| GCAATGTTGTCATTACCTTC+AGG | + | chr2_4:8568854-8568873 | None:intergenic | 40.0% | |
| GAAGGTAATGACAACATTGC+GGG | - | chr2_4:8568854-8568873 | Msa0313200:intron | 40.0% | |
| GTTGTCTCAACAGGAAGATA+TGG | - | chr2_4:8568883-8568902 | Msa0313200:intron | 40.0% | |
| TCAACAGGAAGATATGGAAC+CGG | - | chr2_4:8568889-8568908 | Msa0313200:intron | 40.0% | |
| GCAATGTTGTCATTACCTTC+CGG | + | chr2_4:8568854-8568873 | None:intergenic | 40.0% | |
| ! | CCTTGTGGTCACTTGATAAT+TGG | + | chr2_4:8569108-8569127 | None:intergenic | 40.0% |
| CCAATTATCAAGTGACCACA+AGG | - | chr2_4:8569105-8569124 | Msa0313200:intron | 40.0% | |
| ! | ATACCGGTAACTTGTGTAGT+AGG | - | chr2_4:8569161-8569180 | Msa0313200:intron | 40.0% |
| ! | TACCGGTAACTTGTGTAGTA+GGG | - | chr2_4:8569162-8569181 | Msa0313200:intron | 40.0% |
| TCCTGTTAGAAGATCTACCA+GGG | - | chr2_4:8569264-8569283 | Msa0313200:intron | 40.0% | |
| GTAGTGTTCATAGGATTTGG+AGG | - | chr2_4:8569382-8569401 | Msa0313200:intron | 40.0% | |
| !! | GGCCTTTGGAATGTTCAAAT+TGG | - | chr2_4:8569403-8569422 | Msa0313200:intron | 40.0% |
| TGCATTACTAATTGGTGCAC+TGG | - | chr2_4:8569588-8569607 | Msa0313200:five_prime_UTR | 40.0% | |
| ! | TTACTAATTGGTGCACTGGT+TGG | - | chr2_4:8569592-8569611 | Msa0313200:five_prime_UTR | 40.0% |
| TCTCTCCAACTTCTCTTACG+CGG | + | chr2_4:8565592-8565611 | None:intergenic | 45.0% | |
| CCATCAAGAAGCAAGTACCT+TGG | + | chr2_4:8565652-8565671 | None:intergenic | 45.0% | |
| ! | CCAAGGTACTTGCTTCTTGA+TGG | - | chr2_4:8565649-8565668 | Msa0313200:three_prime_UTR | 45.0% |
| ACTGTCAAGCCGACCTATTA+AGG | + | chr2_4:8566566-8566585 | None:intergenic | 45.0% | |
| AATGTTAAGCCGTCCGATAG+GGG | + | chr2_4:8566712-8566731 | None:intergenic | 45.0% | |
| CTTTGGATAACCATTAGGGG+TGG | + | chr2_4:8566738-8566757 | None:intergenic | 45.0% | |
| AGCGCTCACTCACTCAAATT+AGG | - | chr2_4:8566818-8566837 | Msa0313200:intron | 45.0% | |
| GAAACCTCCAAACCAATGCA+AGG | - | chr2_4:8567369-8567388 | Msa0313200:intron | 45.0% | |
| !! | AAACCCTTGCATTGGTTTGG+AGG | + | chr2_4:8567376-8567395 | None:intergenic | 45.0% |
| !! | GCTAAACCCTTGCATTGGTT+TGG | + | chr2_4:8567379-8567398 | None:intergenic | 45.0% |
| CAAGAGCTAAACCCTTGCAT+TGG | + | chr2_4:8567384-8567403 | None:intergenic | 45.0% | |
| TCTTGCTGGCATTGCTTCAA+TGG | - | chr2_4:8567399-8567418 | Msa0313200:intron | 45.0% | |
| GGCATCACTGTAATGTTCCA+CGG | - | chr2_4:8567577-8567596 | Msa0313200:CDS | 45.0% | |
| CATTTCTCTTGACCCATCTC+TGG | - | chr2_4:8567668-8567687 | Msa0313200:CDS | 45.0% | |
| AATCAAACGAGCCCAGAGAT+GGG | + | chr2_4:8567683-8567702 | None:intergenic | 45.0% | |
| TGGTTATGCTGAGAGTCATG+TGG | - | chr2_4:8567748-8567767 | Msa0313200:intron | 45.0% | |
| GACATGTCAACGTTAGTGTC+TGG | - | chr2_4:8567936-8567955 | Msa0313200:intron | 45.0% | |
| ! | GTCTGGCAATTTTGTCTGAC+AGG | - | chr2_4:8568368-8568387 | Msa0313200:intron | 45.0% |
| TTATGTCGCCGTTTCTCAGT+TGG | - | chr2_4:8568542-8568561 | Msa0313200:intron | 45.0% | |
| AGGTTGTCTCAACCTCAAGT+TGG | - | chr2_4:8568728-8568747 | Msa0313200:intron | 45.0% | |
| AGCAGCTGATGAAACTTTGC+AGG | - | chr2_4:8568817-8568836 | Msa0313200:intron | 45.0% | |
| CAGGAAGATATGGAACCTGA+AGG | - | chr2_4:8568836-8568855 | Msa0313200:intron | 45.0% | |
| ! | GGGTCTTAAGTTGTCTCAAC+AGG | - | chr2_4:8568874-8568893 | Msa0313200:intron | 45.0% |
| !! | TCTTGATTTGTCTCAACCGC+AGG | - | chr2_4:8568934-8568953 | Msa0313200:intron | 45.0% |
| TTAGAAATCACGGCAACCTG+CGG | + | chr2_4:8568953-8568972 | None:intergenic | 45.0% | |
| CAGGTTGCCGTGATTTCTAA+TGG | - | chr2_4:8568953-8568972 | Msa0313200:intron | 45.0% | |
| CACCCTACTACACAAGTTAC+CGG | + | chr2_4:8569167-8569186 | None:intergenic | 45.0% | |
| CTCCTGTTAGAAGATCTACC+AGG | - | chr2_4:8569263-8569282 | Msa0313200:intron | 45.0% | |
| ACCCTGGTAGATCTTCTAAC+AGG | + | chr2_4:8569268-8569287 | None:intergenic | 45.0% | |
| TCATAGGATTTGGAGGCCTT+TGG | - | chr2_4:8569389-8569408 | Msa0313200:intron | 45.0% | |
| !!! | TAAATTTTTAGAATTAATTT+TGG | - | chr2_4:8568002-8568021 | Msa0313200:CDS | 5.0% |
| AGACACCGCGTAAGAGAAGT+TGG | - | chr2_4:8565584-8565603 | Msa0313200:three_prime_UTR | 50.0% | |
| ATCGAACTGTGCGTCTCTCT+TGG | - | chr2_4:8566276-8566295 | Msa0313200:CDS | 50.0% | |
| TCGAACTGTGCGTCTCTCTT+GGG | - | chr2_4:8566277-8566296 | Msa0313200:CDS | 50.0% | |
| ! | TGTGCGCTTGGTAGCTCAAT+GGG | + | chr2_4:8566415-8566434 | None:intergenic | 50.0% |
| ! | TTGTGCGCTTGGTAGCTCAA+TGG | + | chr2_4:8566416-8566435 | None:intergenic | 50.0% |
| ATGTTAAGCCGTCCGATAGG+GGG | + | chr2_4:8566711-8566730 | None:intergenic | 50.0% | |
| ! | GGTGGAACGTATTGGGGTTT+TGG | + | chr2_4:8567193-8567212 | None:intergenic | 50.0% |
| !! | TGTGGTGGTGGAACGTATTG+GGG | + | chr2_4:8567199-8567218 | None:intergenic | 50.0% |
| !! | GTGTGGTGGTGGAACGTATT+GGG | + | chr2_4:8567200-8567219 | None:intergenic | 50.0% |
| GATTGAATTGGAGAGGGGTG+TGG | + | chr2_4:8567217-8567236 | None:intergenic | 50.0% | |
| !! | TGCAAGGGTTTAGCTCTTGC+TGG | - | chr2_4:8567385-8567404 | Msa0313200:intron | 50.0% |
| ! | GTGAGGCGTTAATCAAACCG+TGG | + | chr2_4:8567597-8567616 | None:intergenic | 50.0% |
| CAATCAAACGAGCCCAGAGA+TGG | + | chr2_4:8567684-8567703 | None:intergenic | 50.0% | |
| TGTTCAAGGGTCATCCACAG+TGG | - | chr2_4:8568167-8568186 | Msa0313200:intron | 50.0% | |
| GTTCAAGGGTCATCCACAGT+GGG | - | chr2_4:8568168-8568187 | Msa0313200:intron | 50.0% | |
| ! | GGTTCAAGTTCAACCCACTG+TGG | + | chr2_4:8568184-8568203 | None:intergenic | 50.0% |
| AGGCTATCACTTGGAGCTTC+AGG | + | chr2_4:8568205-8568224 | None:intergenic | 50.0% | |
| AACAGGCACGATCACACACA+GGG | + | chr2_4:8568477-8568496 | None:intergenic | 50.0% | |
| TAACAGGCACGATCACACAC+AGG | + | chr2_4:8568478-8568497 | None:intergenic | 50.0% | |
| AACAGCTGATGAGACCTCAC+AGG | - | chr2_4:8568673-8568692 | Msa0313200:intron | 50.0% | |
| GTTACCTTCAGCTTCCTGTG+AGG | + | chr2_4:8568690-8568709 | None:intergenic | 50.0% | |
| CAGGAAGATATGGAACCGGA+AGG | - | chr2_4:8568893-8568912 | Msa0313200:intron | 50.0% | |
| TTTGATCCTACCCATGAGCC+AGG | - | chr2_4:8569040-8569059 | Msa0313200:intron | 50.0% | |
| TATGTCGCTCGCTGCATCCA+AGG | - | chr2_4:8565632-8565651 | Msa0313200:three_prime_UTR | 55.0% | |
| GGTAGCTCAATGGGCCCATT+AGG | + | chr2_4:8566406-8566425 | None:intergenic | 55.0% | |
| CTAGGTCATAGGCCCCCTAT+CGG | - | chr2_4:8566696-8566715 | Msa0313200:intron | 55.0% | |
| !! | GGTGTGGTGGTGGAACGTAT+TGG | + | chr2_4:8567201-8567220 | None:intergenic | 55.0% |
| ! | TGAATTGGAGAGGGGTGTGG+TGG | + | chr2_4:8567214-8567233 | None:intergenic | 55.0% |
| ACAGGCACGATCACACACAG+GGG | + | chr2_4:8568476-8568495 | None:intergenic | 55.0% | |
| GAGACCTCACAGGAAGCTGA+AGG | - | chr2_4:8568683-8568702 | Msa0313200:intron | 55.0% | |
| CCTAACACTGCCTGGCTCAT+GGG | + | chr2_4:8569053-8569072 | None:intergenic | 55.0% | |
| ACCTAACACTGCCTGGCTCA+TGG | + | chr2_4:8569054-8569073 | None:intergenic | 55.0% | |
| AGTGGAGACCTAACACTGCC+TGG | + | chr2_4:8569061-8569080 | None:intergenic | 55.0% | |
| GTCATAGGCCCCCTATCGGA+CGG | - | chr2_4:8566700-8566719 | Msa0313200:intron | 60.0% | |
| ! | ATTGGAGAGGGGTGTGGTGG+TGG | + | chr2_4:8567211-8567230 | None:intergenic | 60.0% |
| ACACTGCCTGGCTCATGGGT+AGG | + | chr2_4:8569049-8569068 | None:intergenic | 60.0% | |
| CCCATGAGCCAGGCAGTGTT+AGG | - | chr2_4:8569050-8569069 | Msa0313200:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 8565569 | 8569645 | 8565569 | ID=Msa0313200;Name=Msa0313200 |
| chr2_4 | mRNA | 8565569 | 8569645 | 8565569 | ID=Msa0313200-mRNA-1;Parent=Msa0313200;Name=Msa0313200-mRNA-1;_AED=0.26;_eAED=0.26;_QI=240|1|1|1|0.4|0.5|6|339|350 |
| chr2_4 | exon | 8565569 | 8566672 | 8565569 | ID=Msa0313200-mRNA-1:exon:3263;Parent=Msa0313200-mRNA-1 |
| chr2_4 | exon | 8567569 | 8567707 | 8567569 | ID=Msa0313200-mRNA-1:exon:3262;Parent=Msa0313200-mRNA-1 |
| chr2_4 | exon | 8567792 | 8567871 | 8567792 | ID=Msa0313200-mRNA-1:exon:3261;Parent=Msa0313200-mRNA-1 |
| chr2_4 | exon | 8567963 | 8568040 | 8567963 | ID=Msa0313200-mRNA-1:exon:3260;Parent=Msa0313200-mRNA-1 |
| chr2_4 | exon | 8568324 | 8568341 | 8568324 | ID=Msa0313200-mRNA-1:exon:3259;Parent=Msa0313200-mRNA-1 |
| chr2_4 | exon | 8569433 | 8569645 | 8569433 | ID=Msa0313200-mRNA-1:exon:3258;Parent=Msa0313200-mRNA-1 |
| chr2_4 | five_prime_UTR | 8569433 | 8569645 | 8569433 | ID=Msa0313200-mRNA-1:five_prime_utr;Parent=Msa0313200-mRNA-1 |
| chr2_4 | five_prime_UTR | 8568324 | 8568341 | 8568324 | ID=Msa0313200-mRNA-1:five_prime_utr;Parent=Msa0313200-mRNA-1 |
| chr2_4 | five_prime_UTR | 8568032 | 8568040 | 8568032 | ID=Msa0313200-mRNA-1:five_prime_utr;Parent=Msa0313200-mRNA-1 |
| chr2_4 | CDS | 8567963 | 8568031 | 8567963 | ID=Msa0313200-mRNA-1:cds;Parent=Msa0313200-mRNA-1 |
| chr2_4 | CDS | 8567792 | 8567871 | 8567792 | ID=Msa0313200-mRNA-1:cds;Parent=Msa0313200-mRNA-1 |
| chr2_4 | CDS | 8567569 | 8567707 | 8567569 | ID=Msa0313200-mRNA-1:cds;Parent=Msa0313200-mRNA-1 |
| chr2_4 | CDS | 8565908 | 8566672 | 8565908 | ID=Msa0313200-mRNA-1:cds;Parent=Msa0313200-mRNA-1 |
| chr2_4 | three_prime_UTR | 8565569 | 8565907 | 8565569 | ID=Msa0313200-mRNA-1:three_prime_utr;Parent=Msa0313200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
