AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0314780

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0314780 MtrunA17_Chr2g0285461 96.035 908 22 2 1 894 1 908 0.0 1783
Msa0314780 MtrunA17_Chr8g0376771 78.233 928 154 13 1 894 1 914 0.0 1361
Msa0314780 MtrunA17_Chr5g0433301 56.223 916 304 22 1 894 1 841 0.0 877
Msa0314780 MtrunA17_Chr3g0109391 54.388 923 283 24 17 894 20 849 0.0 850
Msa0314780 MtrunA17_Chr4g0070181 57.515 499 170 14 1 468 1 488 2.00e-163 506
Msa0314780 MtrunA17_Chr4g0070181 36.481 233 123 6 631 853 869 1086 3.63e-31 132
Msa0314780 MtrunA17_Chr2g0301251 56.078 510 160 15 1 467 1 489 2.92e-155 485
Msa0314780 MtrunA17_Chr2g0301251 57.273 110 43 2 761 870 986 1091 1.24e-31 133
Msa0314780 MtrunA17_Chr1g0156321 64.850 367 111 5 15 366 35 398 3.47e-153 472
Msa0314780 MtrunA17_Chr1g0156321 49.600 125 62 1 742 866 736 859 1.09e-29 127
Msa0314780 MtrunA17_Chr8g0389081 51.993 552 220 13 20 534 29 572 1.58e-145 459
Msa0314780 MtrunA17_Chr8g0389081 64.000 100 30 1 761 854 985 1084 2.72e-34 142
Msa0314780 MtrunA17_Chr2g0276781 52.186 366 156 6 19 369 19 380 4.90e-113 361
Msa0314780 MtrunA17_Chr2g0276781 37.778 90 54 2 761 849 547 635 9.24e-14 75.5
Msa0314780 MtrunA17_Chr8g0385791 50.546 366 163 6 19 369 55 417 1.00e-108 354
Msa0314780 MtrunA17_Chr8g0385791 46.667 90 46 2 761 849 710 798 2.64e-17 87.0
Msa0314780 MtrunA17_Chr8g0346711 50.581 344 151 6 20 349 26 364 7.55e-104 337
Msa0314780 MtrunA17_Chr8g0346711 44.086 93 49 2 758 849 555 645 3.09e-16 83.6
Msa0314780 MtrunA17_Chr7g0239061 47.326 374 173 10 15 370 6 373 3.46e-99 324
Msa0314780 MtrunA17_Chr7g0239061 37.000 100 60 2 751 849 560 657 1.92e-14 77.8
Msa0314780 MtrunA17_Chr4g0009751 50.000 366 151 11 21 364 17 372 5.00e-97 317
Msa0314780 MtrunA17_Chr2g0326281 47.215 377 158 9 23 361 56 429 4.79e-96 320
Msa0314780 MtrunA17_Chr2g0326281 44.660 103 52 3 757 858 691 789 4.68e-21 99.4
Msa0314780 MtrunA17_Chr4g0029671 48.087 366 160 8 23 362 54 415 1.70e-94 315
Msa0314780 MtrunA17_Chr4g0029671 38.583 127 69 3 724 849 633 751 5.34e-19 92.4
Msa0314780 MtrunA17_Chr2g0282961 46.467 368 156 9 4 344 35 388 3.84e-92 303
Msa0314780 MtrunA17_Chr4g0046371 45.526 380 158 9 23 369 38 401 5.56e-92 306
Msa0314780 MtrunA17_Chr4g0028971 36.607 448 201 13 13 389 2 437 1.00e-70 248
Msa0314780 MtrunA17_Chr2g0326761 37.255 408 192 10 17 368 5 404 3.62e-70 246
Msa0314780 MtrunA17_Chr1g0199681 36.320 413 203 10 13 373 84 488 2.22e-67 238
Msa0314780 MtrunA17_Chr1g0181211 34.625 413 181 9 14 355 18 412 1.25e-63 227
Msa0314780 MtrunA17_Chr3g0115271 34.586 399 205 8 11 361 7 397 3.95e-57 207
Msa0314780 MtrunA17_Chr7g0264171 32.829 463 224 16 18 404 26 477 1.31e-56 206
Msa0314780 MtrunA17_Chr5g0424931 32.911 395 203 12 10 362 11 385 2.00e-48 180
Msa0314780 MtrunA17_Chr7g0264161 34.839 310 175 8 32 323 1 301 4.92e-47 170
Msa0314780 MtrunA17_Chr5g0417281 31.250 384 223 11 16 378 4 367 2.62e-46 174
Msa0314780 MtrunA17_Chr5g0436761 34.232 371 194 13 12 356 3 349 8.48e-46 171
Msa0314780 MtrunA17_Chr1g0178011 32.258 372 213 13 11 362 3 355 9.43e-44 165
Msa0314780 MtrunA17_Chr8g0356211 37.838 259 132 8 135 370 2 254 1.04e-42 158
Msa0314780 MtrunA17_Chr2g0277461 30.986 355 205 12 23 356 13 348 1.89e-38 149
Msa0314780 MtrunA17_Chr2g0289221 32.508 323 166 13 11 305 11 309 9.28e-36 139
Msa0314780 MtrunA17_Chr5g0424741 26.702 382 222 9 18 354 7 375 8.19e-32 131
Msa0314780 MtrunA17_Chr5g0417211 30.619 307 179 10 20 305 9 302 3.58e-31 127
Msa0314780 MtrunA17_Chr5g0425261 28.824 340 213 9 20 343 9 335 1.59e-30 124
Msa0314780 MtrunA17_Chr5g0424801 28.824 340 213 9 20 343 9 335 4.94e-30 123
Msa0314780 MtrunA17_Chr2g0277531 29.739 306 173 12 23 305 20 306 1.49e-27 114
Msa0314780 MtrunA17_Chr5g0425661 33.166 199 110 4 22 205 36 226 5.76e-26 107
Msa0314780 MtrunA17_Chr1g0156301 40.323 124 57 2 742 865 159 265 1.93e-19 89.4
Msa0314780 MtrunA17_Chr1g0156311 45.133 113 29 3 231 343 1 80 4.49e-14 68.6
Msa0314780 MtrunA17_Chr5g0424791 35.714 140 74 6 75 205 12 144 1.81e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0314780 AT1G30330.1 84.189 487 54 7 1 470 1 481 0.0 815
Msa0314780 AT1G30330.3 83.845 489 54 8 1 470 1 483 0.0 811
Msa0314780 AT1G30330.2 83.845 489 54 8 1 470 1 483 0.0 811
Msa0314780 AT1G19850.1 41.953 901 437 25 13 869 43 901 0.0 557
Msa0314780 AT1G19850.2 41.953 901 437 25 13 869 32 890 0.0 556
Msa0314780 AT1G19220.1 56.944 504 166 15 1 469 1 488 6.41e-160 496
Msa0314780 AT1G19220.1 62.366 93 35 0 761 853 958 1050 1.38e-30 130
Msa0314780 AT5G20730.2 57.787 488 147 14 4 455 5 469 5.00e-154 483
Msa0314780 AT5G20730.2 41.709 199 81 8 676 853 945 1129 5.55e-30 129
Msa0314780 AT5G20730.3 57.669 489 147 15 4 455 5 470 2.72e-152 478
Msa0314780 AT5G20730.3 41.709 199 81 8 676 853 946 1130 5.04e-30 129
Msa0314780 AT5G20730.1 57.669 489 147 15 4 455 5 470 4.18e-152 478
Msa0314780 AT5G20730.1 41.709 199 81 8 676 853 946 1130 6.22e-30 128
Msa0314780 AT1G59750.1 52.033 369 154 8 19 369 18 381 1.26e-112 360
Msa0314780 AT1G59750.1 38.889 90 53 2 761 849 542 630 5.98e-14 76.6
Msa0314780 AT1G59750.3 52.033 369 154 8 19 369 18 381 1.26e-112 360
Msa0314780 AT1G59750.3 38.889 90 53 2 761 849 542 630 5.98e-14 76.6
Msa0314780 AT1G59750.4 52.033 369 154 8 19 369 18 381 1.35e-112 360
Msa0314780 AT1G59750.4 38.889 90 53 2 761 849 537 625 6.04e-14 76.3
Msa0314780 AT5G62000.2 49.373 399 160 9 3 362 17 412 1.42e-112 365
Msa0314780 AT5G62000.2 45.055 91 48 2 760 849 732 821 1.28e-16 85.5
Msa0314780 AT5G62000.5 49.373 399 160 9 3 362 17 412 1.42e-112 365
Msa0314780 AT5G62000.5 45.055 91 48 2 760 849 732 821 1.28e-16 85.5
Msa0314780 AT5G62000.3 49.373 399 160 9 3 362 17 412 1.42e-112 365
Msa0314780 AT5G62000.3 45.055 91 48 2 760 849 732 821 1.28e-16 85.5
Msa0314780 AT5G62000.1 49.373 399 160 9 3 362 17 412 1.42e-112 365
Msa0314780 AT5G62000.1 45.055 91 48 2 760 849 732 821 1.28e-16 85.5
Msa0314780 AT1G59750.2 52.033 369 154 8 19 369 18 381 1.79e-112 359
Msa0314780 AT1G59750.2 38.889 90 53 2 761 849 539 627 6.38e-14 76.3
Msa0314780 AT5G62000.4 49.373 399 160 9 3 362 17 412 1.84e-112 365
Msa0314780 AT5G62000.4 45.055 91 48 2 760 849 732 821 1.41e-16 85.1
Msa0314780 AT5G60450.2 49.354 387 159 10 14 368 32 413 1.65e-105 344
Msa0314780 AT5G60450.2 41.573 89 50 2 760 847 640 727 2.48e-17 87.4
Msa0314780 AT5G60450.1 50.132 379 152 10 22 368 64 437 8.06e-105 343
Msa0314780 AT5G60450.1 41.573 89 50 2 760 847 664 751 2.88e-17 87.4
Msa0314780 AT3G61830.1 51.009 347 148 9 20 350 22 362 1.28e-102 332
Msa0314780 AT3G61830.1 36.207 116 70 3 753 867 481 593 1.79e-12 71.6
Msa0314780 AT2G46530.1 50.000 350 154 8 20 354 18 361 5.42e-102 330
Msa0314780 AT2G46530.1 36.893 103 62 2 753 854 482 582 8.88e-13 72.4
Msa0314780 AT2G46530.3 50.000 350 154 8 20 354 39 382 1.07e-101 330
Msa0314780 AT2G46530.3 36.893 103 62 2 753 854 503 603 1.15e-12 72.4
Msa0314780 AT2G33860.1 43.959 389 172 9 23 378 54 429 2.67e-92 304
Msa0314780 AT4G23980.1 47.645 361 163 9 20 362 9 361 1.37e-91 303
Msa0314780 AT4G23980.1 44.444 90 46 2 773 860 536 623 1.70e-15 81.3
Msa0314780 AT4G23980.2 47.645 361 163 9 20 362 9 361 1.52e-91 303
Msa0314780 AT4G23980.2 44.444 90 46 2 773 860 534 621 1.83e-15 81.3
Msa0314780 AT3G61830.2 50.000 316 136 9 51 350 2 311 5.50e-87 288
Msa0314780 AT3G61830.2 36.207 116 70 3 753 867 430 542 1.59e-12 71.6
Msa0314780 AT1G34310.1 41.436 362 189 7 14 361 18 370 3.82e-78 266
Msa0314780 AT1G34310.1 37.805 82 48 2 760 840 510 589 7.89e-11 66.2
Msa0314780 AT1G34410.1 40.884 362 191 7 14 361 18 370 1.67e-77 264
Msa0314780 AT1G34410.1 37.079 89 53 2 760 847 510 596 4.07e-11 67.4
Msa0314780 AT1G35240.1 40.608 362 192 7 14 361 18 370 3.10e-76 260
Msa0314780 AT1G35240.1 38.636 88 51 2 761 847 497 582 2.80e-11 67.8
Msa0314780 AT1G35540.1 40.634 347 183 7 14 346 18 355 2.93e-75 258
Msa0314780 AT1G35540.1 38.889 90 52 2 761 849 510 597 1.06e-12 72.4
Msa0314780 AT1G35520.1 41.399 343 178 7 17 345 21 354 6.02e-74 254
Msa0314780 AT1G34170.1 41.329 346 176 9 17 345 19 354 3.23e-72 247
Msa0314780 AT1G34390.1 40.884 362 189 8 14 361 18 368 4.52e-72 249
Msa0314780 AT2G33860.2 47.426 272 122 5 127 378 2 272 4.25e-68 234
Msa0314780 AT2G46530.2 49.407 253 110 5 116 354 26 274 5.44e-68 236
Msa0314780 AT2G46530.2 36.893 103 62 2 753 854 395 495 6.28e-13 72.8
Msa0314780 AT2G28350.2 36.768 427 187 15 16 374 3 414 5.71e-68 239
Msa0314780 AT2G28350.1 36.768 427 187 15 16 374 3 414 6.24e-68 240
Msa0314780 AT4G30080.1 37.129 404 174 14 11 348 7 396 5.70e-65 231
Msa0314780 AT1G34170.2 38.150 346 161 8 17 345 19 328 2.34e-62 219
Msa0314780 AT1G34170.3 38.150 346 161 8 17 345 19 328 7.70e-62 219
Msa0314780 AT1G34170.3 38.636 88 51 2 763 849 435 520 2.04e-11 68.2
Msa0314780 AT1G77850.1 32.250 400 209 10 18 366 14 402 6.43e-47 177
Msa0314780 AT1G77850.2 32.250 400 209 10 18 366 14 402 7.65e-47 177
Msa0314780 AT5G37020.3 46.460 226 97 8 636 855 497 704 2.66e-43 169
Msa0314780 AT5G37020.1 46.460 226 97 8 636 855 592 799 3.80e-43 169
Msa0314780 AT1G43950.1 41.429 210 107 4 14 212 18 222 1.85e-41 152
Msa0314780 AT5G37020.2 43.719 199 88 8 636 828 592 772 2.00e-31 132

Find 295 sgRNAs with CRISPR-Local

Find 471 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGTTGGTATGCGTTTC+AGG 0.162161 2_4:-10795838 Msa0314780:CDS
TAATGGGATGTCGAACTTTA+AGG 0.164117 2_4:-10794104 Msa0314780:CDS
ATTTATATAAAGTTTGTTAT+TGG 0.168187 2_4:-10793042 Msa0314780:three_prime_UTR
GATAATAATCAGCAGATTTC+TGG 0.177527 2_4:-10794598 Msa0314780:CDS
GCGGATCATTGCTCCCTTCT+TGG 0.200523 2_4:+10794179 None:intergenic
AGATCCTTCCAAACAGCTTC+TGG 0.207005 2_4:-10794872 Msa0314780:CDS
AGAAGAAGAGAGTATGTTTA+AGG 0.222089 2_4:+10798919 None:intergenic
TGTGGCTGCTGCTGCACTTC+AGG 0.228508 2_4:-10794911 Msa0314780:CDS
GAAAGAAGAAAGAGAATAAT+AGG 0.229511 2_4:-10798584 Msa0314780:five_prime_UTR
GAAAAGAACCAATTGCTTCT+TGG 0.261328 2_4:-10796151 Msa0314780:CDS
GGAGGTAAGCTTGGATAGTT+TGG 0.269119 2_4:+10797290 None:intergenic
AGTTGTAAGTAGATGCCTTT+TGG 0.291101 2_4:+10796519 None:intergenic
TTGTTGCAGGTTTATAAATC+AGG 0.292598 2_4:-10793805 Msa0314780:intron
TTTATATAAAGTTTGTTATT+GGG 0.302404 2_4:-10793041 Msa0314780:three_prime_UTR
GGAACCCAAGAGCTTGTTCT+TGG 0.317973 2_4:+10794376 None:intergenic
TCATCTCTTCTAATGCATAA+TGG 0.318760 2_4:-10794121 Msa0314780:CDS
CAAATGGGCAACACTGGCCT+CGG 0.321097 2_4:-10793430 Msa0314780:CDS
CGCCTTCCAGTCCGAACATT+CGG 0.321140 2_4:+10793716 None:intergenic
TACATAGGAAATGTTGTTAA+TGG 0.322032 2_4:+10795308 None:intergenic
CATCTCTTCTAATGCATAAT+GGG 0.330297 2_4:-10794120 Msa0314780:CDS
CCCATTTGCTGCACTTCCTC+GGG 0.331529 2_4:+10793445 None:intergenic
AGAATGGAACATGGGGTGTT+GGG 0.334181 2_4:-10798755 Msa0314780:five_prime_UTR
GCCCATTTGCTGCACTTCCT+CGG 0.336731 2_4:+10793444 None:intergenic
CTCTTAATTATCAAGGGATT+GGG 0.343680 2_4:-10795002 Msa0314780:CDS
TTCTCCTTTGCACAGTATCA+TGG 0.346541 2_4:-10794443 Msa0314780:CDS
GGCATGAAAGATGATGATTT+TGG 0.347577 2_4:-10795075 Msa0314780:CDS
CTGCCTCAGGTGGAGCAGTT+AGG 0.348006 2_4:-10794274 Msa0314780:CDS
TTCTCCTCGGTGATGGCCCT+TGG 0.353839 2_4:-10793630 Msa0314780:CDS
CTTGGAGTTCCCAGCTCTGC+TGG 0.355032 2_4:+10796952 None:intergenic
GTACAAACACATACCTTCTT+GGG 0.364121 2_4:+10798402 None:intergenic
TTAGATTTCTTGAATCTTGA+CGG 0.364706 2_4:+10793347 None:intergenic
TTAAAGCAGCGGTCCTGTTC+GGG 0.371765 2_4:+10794815 None:intergenic
GGTGGATCCACTCCTCTCTT+CGG 0.375518 2_4:-10794314 Msa0314780:CDS
AGAGAAAGAATCAGAAGTTA+AGG 0.376757 2_4:-10799097 Msa0314780:five_prime_UTR
AGATACATGGGTACAATAAC+TGG 0.379364 2_4:-10795623 Msa0314780:CDS
TGTACAAACACATACCTTCT+TGG 0.379755 2_4:+10798401 None:intergenic
CAAGGAACCCAGAAGCTGTT+TGG 0.386898 2_4:+10794864 None:intergenic
CTCTTGAGCAGGAGGCTGTT+GGG 0.387165 2_4:+10796733 None:intergenic
TCTCTTAATTATCAAGGGAT+TGG 0.387791 2_4:-10795003 Msa0314780:CDS
CCTGGATTGCCTTCGTTCCA+TGG 0.388608 2_4:-10795245 Msa0314780:intron
GTTGAGTTTGTTGTTGCTGC+TGG 0.388634 2_4:+10794632 None:intergenic
GGCCTTTCAAAATAATAATC+AGG 0.388931 2_4:-10794755 Msa0314780:CDS
GTGGATCCACTCCTCTCTTC+GGG 0.390379 2_4:-10794313 Msa0314780:CDS
CTCTTGCAGGCCAGCCCAAA+AGG 0.390511 2_4:-10796534 Msa0314780:intron
CCATGGAACGAAGGCAATCC+AGG 0.392004 2_4:+10795245 None:intergenic
CTATTTGAGAGCCTTTGAAT+TGG 0.393125 2_4:+10793391 None:intergenic
CTTCAATCTCTTAATTATCA+AGG 0.393969 2_4:-10795009 Msa0314780:CDS
GGCTTACCTTCCAGCAGAGC+TGG 0.397404 2_4:-10796962 Msa0314780:CDS
AGTGAGCTCGCCCGAATGTT+CGG 0.398934 2_4:-10793727 Msa0314780:CDS
TAATTATGTTTGAATCTTTG+AGG 0.400227 2_4:-10793169 Msa0314780:three_prime_UTR
TCATGTAATTAGAAGATTGA+TGG 0.401440 2_4:+10794041 None:intergenic
GCCCGAGGAAGTGCAGCAAA+TGG 0.402215 2_4:-10793446 Msa0314780:CDS
AAGAATGGAACATGGGGTGT+TGG 0.403532 2_4:-10798756 Msa0314780:five_prime_UTR
GACTTGGATCGCAGGTTGGT+TGG 0.404773 2_4:-10795385 Msa0314780:intron
GAGGTAAGCTTGGATAGTTT+GGG 0.407695 2_4:+10797291 None:intergenic
CACTCTAGGTTGCCTTTCTC+CGG 0.408251 2_4:+10795349 None:intergenic
GTCTTCCAAGAACAAGCTCT+TGG 0.413478 2_4:-10794381 Msa0314780:CDS
GCAACAGTCGCAGCCTCAAC+AGG 0.414241 2_4:-10794776 Msa0314780:CDS
ATTACATTGCCACCGTTTCC+TGG 0.415341 2_4:-10794220 Msa0314780:CDS
CTTGTCTCTTTGCCAGCAGT+TGG 0.417884 2_4:-10797802 Msa0314780:CDS
ATTAAAGCAGCGGTCCTGTT+CGG 0.418907 2_4:+10794814 None:intergenic
GGGATTCTCCGTGCCTCGCC+GGG 0.419026 2_4:-10796869 Msa0314780:CDS
CCAATGAGACTCTCTTCAGC+TGG 0.421483 2_4:-10798439 Msa0314780:CDS
TTCTTGCATACCCAGGAAAA+CGG 0.422042 2_4:-10793956 Msa0314780:CDS
TAGTTTGTCGGCTGTTTACT+TGG 0.426749 2_4:+10796934 None:intergenic
CTTAAACGACCGTGGCCTCC+TGG 0.428239 2_4:-10795263 Msa0314780:CDS
AATTATGTTTGAATCTTTGA+GGG 0.429723 2_4:-10793168 Msa0314780:three_prime_UTR
ATCCGTCACCATTCCCTCTC+AGG 0.433049 2_4:-10795286 Msa0314780:CDS
TGCCTCAGGTGGAGCAGTTA+GGG 0.438031 2_4:-10794273 Msa0314780:CDS
TAATCAGCAGATTTCTGGTT+CGG 0.438677 2_4:-10794593 Msa0314780:CDS
GCCTTCCAGTCCGAACATTC+GGG 0.438695 2_4:+10793717 None:intergenic
TCTTGCATACCCAGGAAAAC+GGG 0.442241 2_4:-10793955 Msa0314780:CDS
GTTCCTGTTCAAAATTCAAC+TGG 0.442615 2_4:-10794358 Msa0314780:CDS
CCAGCTGAAGAGAGTCTCAT+TGG 0.442653 2_4:+10798439 None:intergenic
CGTCAAGGGTATGACAAATT+CGG 0.446170 2_4:+10795892 None:intergenic
AAAAGGCATCTACTTACAAC+TGG 0.447091 2_4:-10796517 Msa0314780:CDS
GAAAATAGTGAAACGGCTAT+TGG 0.448976 2_4:+10796024 None:intergenic
AACCACCGAACTTCCCGAAC+AGG 0.449860 2_4:-10794828 Msa0314780:CDS
AGCCACAGCTTGATACATAT+CGG 0.450340 2_4:+10794927 None:intergenic
GATCCTTCCAAACAGCTTCT+GGG 0.451775 2_4:-10794871 Msa0314780:CDS
GCGGTCCTGTTCGGGAAGTT+CGG 0.455221 2_4:+10794823 None:intergenic
TCTCCTTTGCACAGTATCAT+GGG 0.455578 2_4:-10794442 Msa0314780:CDS
ACTTGGATCGCAGGTTGGTT+GGG 0.456236 2_4:-10795384 Msa0314780:intron
GGCAACCTAGAGTGTCTTTG+TGG 0.458141 2_4:-10795340 Msa0314780:CDS
GCTGATTCTTCGTTGAATCA+TGG 0.461747 2_4:-10794007 Msa0314780:CDS
AAATGGGCAACACTGGCCTC+GGG 0.462909 2_4:-10793429 Msa0314780:CDS
GTTTATAAATCAGGGTCCTT+CGG 0.465594 2_4:-10793796 Msa0314780:CDS
AATTATACATAGTCTATGAT+AGG 0.467100 2_4:-10793119 Msa0314780:three_prime_UTR
TTGGAGGACCCTGTGAGATC+AGG 0.467149 2_4:-10793691 Msa0314780:CDS
GAACTTTGGCATGCATGTGC+TGG 0.467783 2_4:-10797829 Msa0314780:CDS
TGCATGGGTGGTGGTGATTG+AGG 0.469546 2_4:+10794535 None:intergenic
ATCTCAATGTATTCTGCCTC+AGG 0.469855 2_4:-10794287 Msa0314780:CDS
AGGTTGCCTTTCTCCGGCAG+TGG 0.470273 2_4:+10795355 None:intergenic
GTCTTGCAAAAGTAGTTTGT+CGG 0.474515 2_4:+10796922 None:intergenic
GGGGATTCTCCGTGCCTCGC+CGG 0.474560 2_4:-10796870 Msa0314780:CDS
ACCCAGGAAAACGGGGATCA+AGG 0.476331 2_4:-10793947 Msa0314780:CDS
TTCAGCCGCCCGGCGAGGCA+CGG 0.476974 2_4:+10796861 None:intergenic
TCTTCCAAGAACAAGCTCTT+GGG 0.477287 2_4:-10794380 Msa0314780:CDS
ATAAGCTGAGGAGGTAAGCT+TGG 0.477482 2_4:+10797281 None:intergenic
CCGAATAAAAGATTACTTTG+CGG 0.478680 2_4:+10794160 None:intergenic
TCAAACCTTGGCTGCATCCA+AGG 0.479908 2_4:+10794973 None:intergenic
AAGGGATTGGGATTAATCCT+TGG 0.483372 2_4:-10794990 Msa0314780:CDS
ATTGCCACCGTTTCCTGGTA+GGG 0.485104 2_4:-10794215 Msa0314780:CDS
GAGTTCTAGATTCAGAACTT+TGG 0.485224 2_4:-10797843 Msa0314780:CDS
GAATGGAACATGGGGTGTTG+GGG 0.486087 2_4:-10798754 Msa0314780:five_prime_UTR
CCCGAGGAAGTGCAGCAAAT+GGG 0.486695 2_4:-10793445 Msa0314780:CDS
AATGGGATGTCGAACTTTAA+GGG 0.487362 2_4:-10794103 Msa0314780:CDS
TTGTTCTTGGAAGACTCATA+AGG 0.488411 2_4:+10794389 None:intergenic
CGACAAATATTTACCAAAGG+AGG 0.491583 2_4:+10796829 None:intergenic
ACTCTTGAGCAGGAGGCTGT+TGG 0.493884 2_4:+10796732 None:intergenic
CTCACATTGGCGCTCGGTAA+AGG 0.494139 2_4:-10795567 Msa0314780:intron
TTCAATCTCTTAATTATCAA+GGG 0.495099 2_4:-10795008 Msa0314780:CDS
AAGAGAGTATGTTTAAGGAA+AGG 0.497813 2_4:+10798924 None:intergenic
GAGGAAGGCATCACAGTTTG+TGG 0.498220 2_4:+10796109 None:intergenic
CTATGATAGGAGAATTTGAA+TGG 0.498317 2_4:-10793106 Msa0314780:three_prime_UTR
CAGTTTGTGGTCGGCTAGCA+CGG 0.501507 2_4:+10796122 None:intergenic
GCATGAATTCTCCTTTGTTG+TGG 0.501682 2_4:-10795053 Msa0314780:CDS
ATGTGCATCGACTTCCTTGT+TGG 0.502862 2_4:+10797316 None:intergenic
ATGAATCCACTGCCGGAGAA+AGG 0.504170 2_4:-10795361 Msa0314780:CDS
TGAACTCGGTTCCAATTCAA+AGG 0.505743 2_4:-10793402 Msa0314780:CDS
AGCTGCCAGCCTGATCTCAC+AGG 0.506041 2_4:+10793682 None:intergenic
GATGTTCTTCTCCTCGGTGA+TGG 0.506215 2_4:-10793637 Msa0314780:CDS
TGGCTCCGAGACACGGATAG+AGG 0.506451 2_4:-10795033 Msa0314780:CDS
CGTTTAAGCCTGAGAGGGAA+TGG 0.506571 2_4:+10795278 None:intergenic
TCTAGTGAGCACTCCCTACC+AGG 0.508713 2_4:+10794202 None:intergenic
TATGATAGGAGAATTTGAAT+GGG 0.509601 2_4:-10793105 Msa0314780:three_prime_UTR
CACATACCTTCTTGGGGTGG+AGG 0.510763 2_4:+10798409 None:intergenic
CTAGTGACACAAGCACTCAC+GGG 0.513763 2_4:-10796891 Msa0314780:CDS
CAGGACCGCTGCTTTAATGC+AGG 0.514239 2_4:-10794809 Msa0314780:CDS
TGCCCTAACTGCTCCACCTG+AGG 0.514830 2_4:+10794271 None:intergenic
TAATGAAGAGAGAGCTTGCA+TGG 0.515214 2_4:+10794519 None:intergenic
AAACCAGGTTCACCAATACT+AGG 0.515655 2_4:+10793977 None:intergenic
AGTGCTAAAAGACTTGTTGC+TGG 0.517965 2_4:-10796478 Msa0314780:CDS
AATAACTGGCATTTGTGACC+TGG 0.518852 2_4:-10795609 Msa0314780:CDS
CTGTTCAAAATTCAACTGGT+TGG 0.523694 2_4:-10794354 Msa0314780:CDS
TTCACAAAGGTCTTGTTCAG+TGG 0.523923 2_4:+10793917 None:intergenic
TCTGCCACCGGACAGAATCC+AGG 0.524242 2_4:+10795591 None:intergenic
GGCGGATACCAAGAAGCAAT+TGG 0.526575 2_4:+10796143 None:intergenic
GTGCAGCAAATGGGCAACAC+TGG 0.528727 2_4:-10793436 Msa0314780:CDS
CATTGCCACCGTTTCCTGGT+AGG 0.529441 2_4:-10794216 Msa0314780:CDS
TGTTGCAGGTTTATAAATCA+GGG 0.529690 2_4:-10793804 Msa0314780:intron
GTTCGGACTGGAAGGCGAGT+TGG 0.531084 2_4:-10793710 Msa0314780:CDS
GTCAAGTGATAGTATGCACT+TGG 0.531718 2_4:-10796080 Msa0314780:CDS
TCACAAAGGTCTTGTTCAGT+GGG 0.532882 2_4:+10793918 None:intergenic
GCCGTCGAAGCGCATTGCGG+TGG 0.532901 2_4:-10794332 Msa0314780:CDS
TCTTGCTGCAGCAGCTCATG+CGG 0.533897 2_4:-10796053 Msa0314780:CDS
GGGAATTCGTGAATAGTGTA+TGG 0.534696 2_4:-10793486 Msa0314780:CDS
TCTATCTCTTAAAATAATGA+CGG 0.534838 2_4:-10799177 Msa0314780:five_prime_UTR
ATTCAAGAAATCTAAGCAGC+GGG 0.537502 2_4:-10793339 Msa0314780:CDS
TCCTGGGTATGCAAGAAACC+AGG 0.538483 2_4:+10793962 None:intergenic
TTCGTTACCATGCAAATCCC+TGG 0.539298 2_4:+10796703 None:intergenic
GAGAATGATGTTCTTCTCCT+CGG 0.539898 2_4:-10793643 Msa0314780:CDS
GCCCGAATGTTCGGACTGGA+AGG 0.541412 2_4:-10793718 Msa0314780:CDS
TCAGGTGGAGCAGTTAGGGC+AGG 0.541919 2_4:-10794269 Msa0314780:CDS
TCCACCGCAATGCGCTTCGA+CGG 0.542911 2_4:+10794331 None:intergenic
CATGGAGTAACGCCTAGTAT+TGG 0.543768 2_4:-10793989 Msa0314780:CDS
TTAATCCTTGGATGCAGCCA+AGG 0.544513 2_4:-10794978 Msa0314780:CDS
CTGGCTATTAACTCTTGAGC+AGG 0.545283 2_4:+10796722 None:intergenic
GGCATCTACTTACAACTGGA+TGG 0.547248 2_4:-10796513 Msa0314780:CDS
CAGGATGCTCTTTGAAACAG+AGG 0.547415 2_4:-10795819 Msa0314780:CDS
GGTTATAGAAAATAGTGAAA+CGG 0.547772 2_4:+10796017 None:intergenic
TGAAGCGTGTAGTTGAAGAA+TGG 0.548119 2_4:-10798771 Msa0314780:five_prime_UTR
GTTTGCATATTAAGCATGGC+GGG 0.548627 2_4:+10794949 None:intergenic
CTGCTCAAGAGTTAATAGCC+AGG 0.550009 2_4:-10796721 Msa0314780:CDS
GAAGGCAATCCAGGAGGCCA+CGG 0.550715 2_4:+10795254 None:intergenic
GCTAGTGACACAAGCACTCA+CGG 0.551619 2_4:-10796892 Msa0314780:CDS
ATTTCCCACAAAGACACTCT+AGG 0.551924 2_4:+10795335 None:intergenic
GGGAATGGTGACGGATACAT+AGG 0.554939 2_4:+10795293 None:intergenic
GCAACCTAGAGTGTCTTTGT+GGG 0.555847 2_4:-10795339 Msa0314780:CDS
GAGCACTCCCTACCAGGAAA+CGG 0.556789 2_4:+10794208 None:intergenic
AATTTCATCCGACAGATAAG+TGG 0.558834 2_4:+10793138 None:intergenic
GCTTGTGTCACTAGCAGTCA+AGG 0.559088 2_4:+10796900 None:intergenic
AGGGTCCTTCGGAAGATCGT+TGG 0.562529 2_4:-10793785 Msa0314780:CDS
TTTGTGACCTGGATTCTGTC+CGG 0.562740 2_4:-10795598 Msa0314780:CDS
GAGTGCTCACTAGACCAAGA+AGG 0.564137 2_4:-10794193 Msa0314780:CDS
ATCGGTTTGCATATTAAGCA+TGG 0.564195 2_4:+10794945 None:intergenic
ACGCCTAGTATTGGTGAACC+TGG 0.564432 2_4:-10793980 Msa0314780:CDS
ATTGAAGTACAGTAGTAACT+TGG 0.565444 2_4:+10799059 None:intergenic
TTTGTTGTGGCTCCGAGACA+CGG 0.566247 2_4:-10795040 Msa0314780:CDS
GCTTACCTTCCAGCAGAGCT+GGG 0.567684 2_4:-10796961 Msa0314780:CDS
TTGATGGTAGGACATGGTTG+AGG 0.567713 2_4:+10794057 None:intergenic
AGCTTTAACATACTTCGTCA+AGG 0.571096 2_4:+10795877 None:intergenic
AATGGAACATGGGGTGTTGG+GGG 0.571152 2_4:-10798753 Msa0314780:five_prime_UTR
TTAGTAGTCTAGAGATCCCA+CGG 0.572139 2_4:+10793309 None:intergenic
GAAGCCCTCTATCCGTGTCT+CGG 0.572260 2_4:+10795028 None:intergenic
ACAACTCTACTTCCAACTGC+TGG 0.574124 2_4:+10797790 None:intergenic
CGGACTGGAAGGCGAGTTGG+AGG 0.574126 2_4:-10793707 Msa0314780:CDS
TTTAGTCCTCCACCCCAAGA+AGG 0.575086 2_4:-10798415 Msa0314780:intron
TTCTTGGAAGACTCATAAGG+TGG 0.575295 2_4:+10794392 None:intergenic
ACTTGTTCACTGTGACCTTG+TGG 0.575829 2_4:+10797760 None:intergenic
TACAGCATTCAGAGGTTGCA+AGG 0.577363 2_4:+10797085 None:intergenic
ATATGGGATACTTACGGCCA+AGG 0.577394 2_4:+10793613 None:intergenic
TATGGGATACTTACGGCCAA+GGG 0.577771 2_4:+10793614 None:intergenic
GGAGAAGAACATCATTCTCT+CGG 0.577950 2_4:+10793647 None:intergenic
GTCCTGTTCGGGAAGTTCGG+TGG 0.578597 2_4:+10794826 None:intergenic
GCCAATGTGAGTTCTGCCAC+CGG 0.579314 2_4:+10795579 None:intergenic
TATCATACTCGAGTTTCAGT+TGG 0.582440 2_4:-10795851 Msa0314780:CDS
TGCTCAAGAGTTAATAGCCA+GGG 0.582850 2_4:-10796720 Msa0314780:CDS
AGTGCTCACTAGACCAAGAA+GGG 0.584022 2_4:-10794192 Msa0314780:CDS
TGAGGATTAGTCTGAGCTTG+TGG 0.584983 2_4:+10794706 None:intergenic
GCTTTAACATACTTCGTCAA+GGG 0.585048 2_4:+10795878 None:intergenic
GAACCCAGAAGCTGTTTGGA+AGG 0.588893 2_4:+10794868 None:intergenic
ACCTGGTTTCTTGCATACCC+AGG 0.589141 2_4:-10793963 Msa0314780:CDS
GTTGCTGCTGGTTATGATGA+CGG 0.589209 2_4:+10794644 None:intergenic
GGTTGGGATGAATCCACTGC+CGG 0.589399 2_4:-10795368 Msa0314780:CDS
GCAGAACTCACATTGGCGCT+CGG 0.590336 2_4:-10795573 Msa0314780:CDS
GCTCGCCCGAATGTTCGGAC+TGG 0.591896 2_4:-10793722 Msa0314780:CDS
ATTATGCATTAGAAGAGATG+AGG 0.592095 2_4:+10794123 None:intergenic
AGCATGGCGGGATCAAACCT+TGG 0.593115 2_4:+10794961 None:intergenic
TCTAATTACATGAACACCAC+AGG 0.594162 2_4:-10794031 Msa0314780:CDS
TGATGCTGTAGATGCTGTTG+AGG 0.596375 2_4:+10794688 None:intergenic
ATGGGATGTCGAACTTTAAG+GGG 0.597378 2_4:-10794102 Msa0314780:CDS
TATGTTTGAATCTTTGAGGG+TGG 0.597903 2_4:-10793165 Msa0314780:three_prime_UTR
GAGTTCCCAGCTCTGCTGGA+AGG 0.598003 2_4:+10796956 None:intergenic
TCAATGTATTCTGCCTCAGG+TGG 0.598371 2_4:-10794284 Msa0314780:CDS
ATTGAGATGCTCCCGAAGAG+AGG 0.602086 2_4:+10794302 None:intergenic
AGCCTGAGAGGGAATGGTGA+CGG 0.604684 2_4:+10795284 None:intergenic
ATGATAGGAGAATTTGAATG+GGG 0.609018 2_4:-10793104 Msa0314780:three_prime_UTR
CTGCTGCACTTCAGGACATG+AGG 0.609491 2_4:-10794903 Msa0314780:CDS
GCTATTAACTCTTGAGCAGG+AGG 0.611946 2_4:+10796725 None:intergenic
TGTAGTTGAAGAATGGAACA+TGG 0.612502 2_4:-10798764 Msa0314780:five_prime_UTR
GGCTCCGAGACACGGATAGA+GGG 0.613419 2_4:-10795032 Msa0314780:CDS
TAAATTCTCATTGAGATGAG+TGG 0.615216 2_4:+10793072 None:intergenic
TTATGCATTAGAAGAGATGA+GGG 0.615668 2_4:+10794124 None:intergenic
GATTCAAGAAATCTAAGCAG+CGG 0.616289 2_4:-10793340 Msa0314780:CDS
AAAAGCAAACAAGACCCAGA+AGG 0.616732 2_4:+10798821 None:intergenic
GAGAGAGCTTGCATGGGTGG+TGG 0.617938 2_4:+10794526 None:intergenic
AGTTGACAAATAAGCTGAGG+AGG 0.618727 2_4:+10797272 None:intergenic
ACAACAAACTCAACAGCAAG+TGG 0.620384 2_4:-10794623 Msa0314780:CDS
CACGGTCGTTTAAGCCTGAG+AGG 0.624256 2_4:+10795272 None:intergenic
GTGGCATACCACTTATCTGT+CGG 0.625057 2_4:-10793146 Msa0314780:three_prime_UTR
AAGGCATCACAGTTTGTGGT+CGG 0.625402 2_4:+10796113 None:intergenic
GTAATTAGAAGATTGATGGT+AGG 0.628481 2_4:+10794045 None:intergenic
CTGCGCCTGCATTAAAGCAG+CGG 0.630823 2_4:+10794804 None:intergenic
TCTTGGAAGACTCATAAGGT+GGG 0.631001 2_4:+10794393 None:intergenic
AAGGGTATGACAAATTCGGA+TGG 0.631171 2_4:+10795896 None:intergenic
AGGACCCTGTGAGATCAGGC+TGG 0.632061 2_4:-10793687 Msa0314780:CDS
ACAAACTCAACAGCAAGTGG+TGG 0.632664 2_4:-10794620 Msa0314780:CDS
CAACGAAGAATCAGCACCTG+TGG 0.634227 2_4:+10794015 None:intergenic
GAAGAGAGAGCTTGCATGGG+TGG 0.634269 2_4:+10794523 None:intergenic
CTTGCATACCCAGGAAAACG+GGG 0.635833 2_4:-10793954 Msa0314780:CDS
CTCTCAGGCTTAAACGACCG+TGG 0.637655 2_4:-10795271 Msa0314780:CDS
AGAAGATTGATGGTAGGACA+TGG 0.637666 2_4:+10794051 None:intergenic
TCGAACTTTAAGGGGATCAG+TGG 0.638766 2_4:-10794094 Msa0314780:CDS
TACAAACACATACCTTCTTG+GGG 0.638829 2_4:+10798403 None:intergenic
CTTAAGAAAAGAAAAGTGAA+CGG 0.638881 2_4:+10798888 None:intergenic
AGGTGGGATGATTCATCATG+CGG 0.640255 2_4:+10794409 None:intergenic
TTGGCCGTCGAAGCGCATTG+CGG 0.640591 2_4:-10794335 Msa0314780:CDS
TAGTGACACAAGCACTCACG+GGG 0.641025 2_4:-10796890 Msa0314780:CDS
AGGAAAATTCACCTTCACAA+AGG 0.641819 2_4:+10793904 None:intergenic
TCCGGTGGCAGAACTCACAT+TGG 0.642216 2_4:-10795580 Msa0314780:CDS
GGTGGCTGTGTCAACCAACA+AGG 0.642632 2_4:-10797330 Msa0314780:CDS
TTAATAGCCAGGGATTTGCA+TGG 0.643356 2_4:-10796710 Msa0314780:intron
TCACTTGACAGTACTGAGGA+AGG 0.646608 2_4:+10796094 None:intergenic
AAGGAGAAGAAGAATCAATG+AGG 0.650939 2_4:-10798728 Msa0314780:five_prime_UTR
AAACACATACCTTCTTGGGG+TGG 0.651129 2_4:+10798406 None:intergenic
TGGTTGCTGAAATTGAAGCA+AGG 0.651942 2_4:+10794846 None:intergenic
AATGAAGAGAGAGCTTGCAT+GGG 0.652076 2_4:+10794520 None:intergenic
CATCTGCGCATACACCTCAT+CGG 0.653667 2_4:+10797109 None:intergenic
TGAAGTTGACAAATAAGCTG+AGG 0.655755 2_4:+10797269 None:intergenic
CATCAAGATACTTTCGCCCG+AGG 0.658329 2_4:-10793461 Msa0314780:CDS
GTGTGTCATACAGCATTCAG+AGG 0.660186 2_4:+10797077 None:intergenic
TGAAGCTAACCATGGAACGA+AGG 0.660506 2_4:+10795236 None:intergenic
GATGCTCCCGAAGAGAGGAG+TGG 0.661943 2_4:+10794307 None:intergenic
GTGACCTGGATTCTGTCCGG+TGG 0.662152 2_4:-10795595 Msa0314780:CDS
CACTCCCTACCAGGAAACGG+TGG 0.664608 2_4:+10794211 None:intergenic
ATAGCTATTTAGTTGTGACA+AGG 0.665443 2_4:-10793215 Msa0314780:three_prime_UTR
CAGAGGAGTCTAGTGTGCGA+CGG 0.670121 2_4:-10795802 Msa0314780:intron
GAACCCATGATACTGTGCAA+AGG 0.670731 2_4:+10794439 None:intergenic
ACTGCTGGCAAAGAGACAAG+AGG 0.671615 2_4:+10797805 None:intergenic
TGATAGGAGAATTTGAATGG+GGG 0.672129 2_4:-10793103 Msa0314780:three_prime_UTR
GCTGCCAGCCTGATCTCACA+GGG 0.673300 2_4:+10793683 None:intergenic
ACTGAACAAGACCTTTGTGA+AGG 0.673840 2_4:-10793915 Msa0314780:intron
CTGCTGGCAAAGAGACAAGA+GGG 0.675164 2_4:+10797806 None:intergenic
GTAGTTGAAGAATGGAACAT+GGG 0.675713 2_4:-10798763 Msa0314780:five_prime_UTR
GTGTCTCGGAGCCACAACAA+AGG 0.677037 2_4:+10795042 None:intergenic
AAGCAGCGGGATAACAACCG+TGG 0.677360 2_4:-10793326 Msa0314780:CDS
GATATCCAACGATCTTCCGA+AGG 0.678418 2_4:+10793780 None:intergenic
ACGGTCGTTTAAGCCTGAGA+GGG 0.680503 2_4:+10795273 None:intergenic
AGCAGCGGGATAACAACCGT+GGG 0.682119 2_4:-10793325 Msa0314780:CDS
ATTCTCCGTGCCTCGCCGGG+CGG 0.687655 2_4:-10796866 Msa0314780:CDS
AACCGATATGTATCAAGCTG+TGG 0.692664 2_4:-10794929 Msa0314780:CDS
GAACCGAGTTCAAAAGCCCG+AGG 0.695574 2_4:+10793413 None:intergenic
AGAGTTGTGTACTTTCCACA+AGG 0.698507 2_4:-10797775 Msa0314780:CDS
ACGGCCAAGGGCCATCACCG+AGG 0.706646 2_4:+10793626 None:intergenic
GGTTTGCATATTAAGCATGG+CGG 0.708185 2_4:+10794948 None:intergenic
TCAAGTGATAGTATGCACTT+GGG 0.709086 2_4:-10796079 Msa0314780:CDS
ACTATCACTTGACAGTACTG+AGG 0.709379 2_4:+10796090 None:intergenic
GGCTGATGTGGAAACCGATG+AGG 0.711072 2_4:-10797123 Msa0314780:CDS
ATTGATTGAATGAAACTGAG+AGG 0.721273 2_4:-10799144 Msa0314780:five_prime_UTR
TGCTGGTTATGATGACGGAG+TGG 0.738797 2_4:+10794649 None:intergenic
TGGAACGAAGGCAATCCAGG+AGG 0.743475 2_4:+10795248 None:intergenic
TTTGTGGTCGGCTAGCACGG+CGG 0.755883 2_4:+10796125 None:intergenic
TAGTTGAAGAATGGAACATG+GGG 0.764762 2_4:-10798762 Msa0314780:five_prime_UTR
AGTGACACAAGCACTCACGG+GGG 0.846522 2_4:-10796889 Msa0314780:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTAATTTTTTTTGAAG+TGG - chr2_4:10794141-10794160 Msa0314780:CDS 10.0%
!!! TTTACTTTTGTTTTAAATTT+CGG - chr2_4:10794669-10794688 Msa0314780:CDS 10.0%
!!! ATTTATATAAAGTTTGTTAT+TGG - chr2_4:10799179-10799198 Msa0314780:five_prime_UTR 10.0%
!!! TTTATATAAAGTTTGTTATT+GGG - chr2_4:10799180-10799199 Msa0314780:five_prime_UTR 10.0%
!! TTTATTGCTAATTTAATCTT+TGG - chr2_4:10794028-10794047 Msa0314780:CDS 15.0%
!! TTATTGCTAATTTAATCTTT+GGG - chr2_4:10794029-10794048 Msa0314780:CDS 15.0%
!! TCATAAATTATACATCAAAA+AGG + chr2_4:10796750-10796769 None:intergenic 15.0%
!! ATTTAGCATTAAAAAGAAAA+AGG + chr2_4:10798645-10798664 None:intergenic 15.0%
!! TCTATCTCTTAAAATAATGA+CGG - chr2_4:10793044-10793063 Msa0314780:three_prime_UTR 20.0%
!!! TAAGATTTTAACCAGTTTTT+TGG - chr2_4:10793565-10793584 Msa0314780:intron 20.0%
!!! AGAATAATAGGATTGTTTTT+TGG - chr2_4:10793649-10793668 Msa0314780:CDS 20.0%
!! AAAGATAGATGAAAAGAAAA+AGG + chr2_4:10793875-10793894 None:intergenic 20.0%
!!! TTGTTATTGCTACATTTTTT+TGG - chr2_4:10793919-10793938 Msa0314780:CDS 20.0%
!!! TGTTATTGCTACATTTTTTT+GGG - chr2_4:10793920-10793939 Msa0314780:CDS 20.0%
!! TATTGCTAATTTAATCTTTG+GGG - chr2_4:10794030-10794049 Msa0314780:CDS 20.0%
!!! TTTTTGTTATCTAACATGAA+GGG - chr2_4:10794097-10794116 Msa0314780:CDS 20.0%
!!! ATTAATTTTTTTTGAAGTGG+AGG - chr2_4:10794144-10794163 Msa0314780:CDS 20.0%
!!! TATGAGGTTTTTATATTACA+TGG - chr2_4:10794326-10794345 Msa0314780:CDS 20.0%
!!! TTTTTATATTACATGGCATT+GGG - chr2_4:10794333-10794352 Msa0314780:CDS 20.0%
!! AGTAAGAATAAAGTAATACT+AGG - chr2_4:10794588-10794607 Msa0314780:CDS 20.0%
!! AACAAAAGTAAAAACAGAAA+AGG + chr2_4:10794661-10794680 None:intergenic 20.0%
!! CGTCAAAATCTTTAATAATT+CGG - chr2_4:10794695-10794714 Msa0314780:CDS 20.0%
!!! TATAATTTTTTATCTCTTGC+AGG - chr2_4:10795674-10795693 Msa0314780:intron 20.0%
!!! TAAGAATGTTTTAGTATTGA+AGG + chr2_4:10795887-10795906 None:intergenic 20.0%
!! ATTATGTGATATCTTATCAA+TGG - chr2_4:10796015-10796034 Msa0314780:CDS 20.0%
!!! AAATGCTTTAGTTTTTTATG+TGG - chr2_4:10796480-10796499 Msa0314780:CDS 20.0%
!! TTCAATCTCTTAATTATCAA+GGG - chr2_4:10797213-10797232 Msa0314780:intron 20.0%
!!! TAATAGTCTGCATTTTTTTA+TGG - chr2_4:10798948-10798967 Msa0314780:five_prime_UTR 20.0%
!!! AATAGTCTGCATTTTTTTAT+GGG - chr2_4:10798949-10798968 Msa0314780:five_prime_UTR 20.0%
!! TAATTATGTTTGAATCTTTG+AGG - chr2_4:10799052-10799071 Msa0314780:five_prime_UTR 20.0%
!! AATTATGTTTGAATCTTTGA+GGG - chr2_4:10799053-10799072 Msa0314780:five_prime_UTR 20.0%
!! AATTATACATAGTCTATGAT+AGG - chr2_4:10799102-10799121 Msa0314780:five_prime_UTR 20.0%
! AAAAATGAGATGAGAAACAA+TGG + chr2_4:10793224-10793243 None:intergenic 25.0%
! ATGTTTAAGGAAAGGAAAAA+TGG + chr2_4:10793292-10793311 None:intergenic 25.0%
! CTTAAGAAAAGAAAAGTGAA+CGG + chr2_4:10793336-10793355 None:intergenic 25.0%
!!! TTTTTCATTTTTCACCTTCT+GGG - chr2_4:10793386-10793405 Msa0314780:CDS 25.0%
!!! ATTGTTTTTTGTTGTGAAAC+TGG - chr2_4:10793525-10793544 Msa0314780:intron 25.0%
!!! ATTTTAACCAGTTTTTTGGT+TGG - chr2_4:10793569-10793588 Msa0314780:intron 25.0%
! GAAAGAAGAAAGAGAATAAT+AGG - chr2_4:10793637-10793656 Msa0314780:CDS 25.0%
!!! ATAATAGGATTGTTTTTTGG+TGG - chr2_4:10793652-10793671 Msa0314780:CDS 25.0%
!!! TAATAGGATTGTTTTTTGGT+GGG - chr2_4:10793653-10793672 Msa0314780:CDS 25.0%
! TTCAAGAAAAATTGTGAACA+AGG + chr2_4:10793898-10793917 None:intergenic 25.0%
! AGGTAAATAAAAATTGTCTC+TGG - chr2_4:10793968-10793987 Msa0314780:CDS 25.0%
! ATTGCTAATTTAATCTTTGG+GGG - chr2_4:10794031-10794050 Msa0314780:CDS 25.0%
!!! GTTTTTGTTATCTAACATGA+AGG - chr2_4:10794096-10794115 Msa0314780:CDS 25.0%
!! GATGTGAAAATTCATCTTTT+GGG - chr2_4:10794166-10794185 Msa0314780:CDS 25.0%
! ACAAAGGACAAATTGATTAT+GGG + chr2_4:10794299-10794318 None:intergenic 25.0%
!! GTTTTTATATTACATGGCAT+TGG - chr2_4:10794332-10794351 Msa0314780:CDS 25.0%
!!! GCTTTAAAAATAATGGTCTA+CGG + chr2_4:10794805-10794824 None:intergenic 25.0%
!!! GAGAGATGCTTTAAAAATAA+TGG + chr2_4:10794812-10794831 None:intergenic 25.0%
! TTTCGACAAATATTTACCAA+AGG + chr2_4:10795398-10795417 None:intergenic 25.0%
! TTCACTTTAATTGCAAATGT+CGG - chr2_4:10795585-10795604 Msa0314780:CDS 25.0%
! AGGAATAGAACAAATTAATG+AGG + chr2_4:10795845-10795864 None:intergenic 25.0%
! GGTTATAGAAAATAGTGAAA+CGG + chr2_4:10796207-10796226 None:intergenic 25.0%
! TCTGTGCAAGAAAAATATAT+TGG + chr2_4:10796581-10796600 None:intergenic 25.0%
!! TCAATGTAAAGGTATAACTT+GGG + chr2_4:10796716-10796735 None:intergenic 25.0%
! ATTATACATCAAAAAGGCAA+GGG + chr2_4:10796744-10796763 None:intergenic 25.0%
! AATTATACATCAAAAAGGCA+AGG + chr2_4:10796745-10796764 None:intergenic 25.0%
! TACATAGGAAATGTTGTTAA+TGG + chr2_4:10796916-10796935 None:intergenic 25.0%
!!! CTTTGAAATGTAATTAGCTT+AGG + chr2_4:10797079-10797098 None:intergenic 25.0%
! CTAAGCTAATTACATTTCAA+AGG - chr2_4:10797077-10797096 Msa0314780:intron 25.0%
! CTTCAATCTCTTAATTATCA+AGG - chr2_4:10797212-10797231 Msa0314780:intron 25.0%
!!! CTCCTGATTATTATTTTGAA+AGG + chr2_4:10797471-10797490 None:intergenic 25.0%
! TCATGTAATTAGAAGATTGA+TGG + chr2_4:10798183-10798202 None:intergenic 25.0%
!! ACCACTTCTTACATTTTATT+TGG - chr2_4:10798385-10798404 Msa0314780:intron 25.0%
! ACCAAATAAAATGTAAGAAG+TGG + chr2_4:10798389-10798408 None:intergenic 25.0%
! AAAGGAAGAAAGTAGAATAT+GGG + chr2_4:10798627-10798646 None:intergenic 25.0%
! AAAAGGAAGAAAGTAGAATA+TGG + chr2_4:10798628-10798647 None:intergenic 25.0%
! TTAGATTTCTTGAATCTTGA+CGG + chr2_4:10798877-10798896 None:intergenic 25.0%
! TATGATAGGAGAATTTGAAT+GGG - chr2_4:10799116-10799135 Msa0314780:five_prime_UTR 25.0%
ATTGATTGAATGAAACTGAG+AGG - chr2_4:10793077-10793096 Msa0314780:three_prime_UTR 30.0%
AGAGAAAGAATCAGAAGTTA+AGG - chr2_4:10793124-10793143 Msa0314780:three_prime_UTR 30.0%
ATTGAAGTACAGTAGTAACT+TGG + chr2_4:10793165-10793184 None:intergenic 30.0%
AAGATCAAAAAGAACAAGAG+TGG + chr2_4:10793269-10793288 None:intergenic 30.0%
! AAGAGAGTATGTTTAAGGAA+AGG + chr2_4:10793300-10793319 None:intergenic 30.0%
! AGAAGAAGAGAGTATGTTTA+AGG + chr2_4:10793305-10793324 None:intergenic 30.0%
!! CTTTTTCATTTTTCACCTTC+TGG - chr2_4:10793385-10793404 Msa0314780:CDS 30.0%
!! TTTTGTTGTGAAACTGGTTT+TGG - chr2_4:10793531-10793550 Msa0314780:intron 30.0%
! GGATGTGAAAATTCATCTTT+TGG - chr2_4:10794165-10794184 Msa0314780:CDS 30.0%
! CTTTTCTAATTCCTTAGCTA+TGG + chr2_4:10794217-10794236 None:intergenic 30.0%
!! AATAAGCACCTTTAAGATCT+TGG - chr2_4:10794257-10794276 Msa0314780:CDS 30.0%
TGGTAAATCCAAGATCTTAA+AGG + chr2_4:10794268-10794287 None:intergenic 30.0%
CAAAGGACAAATTGATTATG+GGG + chr2_4:10794298-10794317 None:intergenic 30.0%
CACAAAGGACAAATTGATTA+TGG + chr2_4:10794300-10794319 None:intergenic 30.0%
! TGTGTTACACTCTTTTACTA+AGG - chr2_4:10794558-10794577 Msa0314780:CDS 30.0%
! GTGTTACACTCTTTTACTAA+GGG - chr2_4:10794559-10794578 Msa0314780:CDS 30.0%
! TGTTACACTCTTTTACTAAG+GGG - chr2_4:10794560-10794579 Msa0314780:CDS 30.0%
!!! ACTGGTTTTGCAATTTAGAT+AGG - chr2_4:10795181-10795200 Msa0314780:intron 30.0%
ACTTGAGAAACTGATAGATT+TGG + chr2_4:10795440-10795459 None:intergenic 30.0%
ATGAACATGTTTCTTGTTGA+GGG - chr2_4:10795628-10795647 Msa0314780:intron 30.0%
TTTGTTCTATTCCTTTACCT+TGG - chr2_4:10795851-10795870 Msa0314780:CDS 30.0%
!!! CACGAGAATTGTTGATTTTT+TGG - chr2_4:10795982-10796001 Msa0314780:intron 30.0%
! TCACTATTTTCTATAACCCA+CGG - chr2_4:10796209-10796228 Msa0314780:intron 30.0%
TAGTTATTATTGCATACCGT+GGG + chr2_4:10796228-10796247 None:intergenic 30.0%
! ATTTTTCTTGCACAGATACA+TGG - chr2_4:10796585-10796604 Msa0314780:intron 30.0%
! TTTTTCTTGCACAGATACAT+GGG - chr2_4:10796586-10796605 Msa0314780:intron 30.0%
! GTCAATGTAAAGGTATAACT+TGG + chr2_4:10796717-10796736 None:intergenic 30.0%
TTATACATCAAAAAGGCAAG+GGG + chr2_4:10796743-10796762 None:intergenic 30.0%
!! TAAAATGCAGCTTTTTGACT+TGG - chr2_4:10796820-10796839 Msa0314780:intron 30.0%
TCTCTTAATTATCAAGGGAT+TGG - chr2_4:10797218-10797237 Msa0314780:intron 30.0%
CTCTTAATTATCAAGGGATT+GGG - chr2_4:10797219-10797238 Msa0314780:intron 30.0%
GGCCTTTCAAAATAATAATC+AGG - chr2_4:10797466-10797485 Msa0314780:intron 30.0%
GATAATAATCAGCAGATTTC+TGG - chr2_4:10797623-10797642 Msa0314780:intron 30.0%
CCGAATAAAAGATTACTTTG+CGG + chr2_4:10798064-10798083 None:intergenic 30.0%
! CCGCAAAGTAATCTTTTATT+CGG - chr2_4:10798061-10798080 Msa0314780:intron 30.0%
TTATGCATTAGAAGAGATGA+GGG + chr2_4:10798100-10798119 None:intergenic 30.0%
ATTATGCATTAGAAGAGATG+AGG + chr2_4:10798101-10798120 None:intergenic 30.0%
TCATCTCTTCTAATGCATAA+TGG - chr2_4:10798100-10798119 Msa0314780:intron 30.0%
CATCTCTTCTAATGCATAAT+GGG - chr2_4:10798101-10798120 Msa0314780:intron 30.0%
! GTAATTAGAAGATTGATGGT+AGG + chr2_4:10798179-10798198 None:intergenic 30.0%
GAGATGATAATAATTCCATG+AGG + chr2_4:10798340-10798359 None:intergenic 30.0%
TTGTTGCAGGTTTATAAATC+AGG - chr2_4:10798416-10798435 Msa0314780:CDS 30.0%
TGTTGCAGGTTTATAAATCA+GGG - chr2_4:10798417-10798436 Msa0314780:CDS 30.0%
AGTAGAATATGGGATACTTA+CGG + chr2_4:10798617-10798636 None:intergenic 30.0%
ATAGCTATTTAGTTGTGACA+AGG - chr2_4:10799006-10799025 Msa0314780:five_prime_UTR 30.0%
CTATGATAGGAGAATTTGAA+TGG - chr2_4:10799115-10799134 Msa0314780:five_prime_UTR 30.0%
ATGATAGGAGAATTTGAATG+GGG - chr2_4:10799117-10799136 Msa0314780:five_prime_UTR 30.0%
TAAATTCTCATTGAGATGAG+TGG + chr2_4:10799152-10799171 None:intergenic 30.0%
TCAAAAAGAACAAGAGTGGT+GGG + chr2_4:10793265-10793284 None:intergenic 35.0%
ATCAAAAAGAACAAGAGTGG+TGG + chr2_4:10793266-10793285 None:intergenic 35.0%
TGTAGTTGAAGAATGGAACA+TGG - chr2_4:10793457-10793476 Msa0314780:CDS 35.0%
GTAGTTGAAGAATGGAACAT+GGG - chr2_4:10793458-10793477 Msa0314780:CDS 35.0%
TAGTTGAAGAATGGAACATG+GGG - chr2_4:10793459-10793478 Msa0314780:CDS 35.0%
AAGGAGAAGAAGAATCAATG+AGG - chr2_4:10793493-10793512 Msa0314780:intron 35.0%
!!! CAGTTTTTTGGTTGGTGAAA+GGG - chr2_4:10793577-10793596 Msa0314780:intron 35.0%
!!! AGTTTTTTGGTTGGTGAAAG+GGG - chr2_4:10793578-10793597 Msa0314780:intron 35.0%
!!! AGAGAGAGTGTTTTTGATTG+TGG - chr2_4:10793718-10793737 Msa0314780:CDS 35.0%
!!! GAGAGAGTGTTTTTGATTGT+GGG - chr2_4:10793719-10793738 Msa0314780:CDS 35.0%
TACAAACACATACCTTCTTG+GGG + chr2_4:10793821-10793840 None:intergenic 35.0%
GTACAAACACATACCTTCTT+GGG + chr2_4:10793822-10793841 None:intergenic 35.0%
TGTACAAACACATACCTTCT+TGG + chr2_4:10793823-10793842 None:intergenic 35.0%
GAAAGAACAAGTTCAAATCC+TGG + chr2_4:10794004-10794023 None:intergenic 35.0%
!!! TCTTGTTTTTGCCATAGCTA+AGG - chr2_4:10794203-10794222 Msa0314780:CDS 35.0%
ATTGATTATGGGGATACTCT+TGG + chr2_4:10794288-10794307 None:intergenic 35.0%
! AACCTCATAACTTGTCACAA+AGG + chr2_4:10794315-10794334 None:intergenic 35.0%
! TATATTACATGGCATTGGGA+TGG - chr2_4:10794337-10794356 Msa0314780:CDS 35.0%
!! GAGTTCTAGATTCAGAACTT+TGG - chr2_4:10794378-10794397 Msa0314780:CDS 35.0%
!! GTCCACCATGATTTTTCAAA+GGG + chr2_4:10794535-10794554 None:intergenic 35.0%
!! TGTCCACCATGATTTTTCAA+AGG + chr2_4:10794536-10794555 None:intergenic 35.0%
! TACTAGGAATCTCTTGTTTC+TGG - chr2_4:10794604-10794623 Msa0314780:CDS 35.0%
GTGACACATATATCCTAACT+CGG - chr2_4:10794854-10794873 Msa0314780:CDS 35.0%
TGAAGTTGACAAATAAGCTG+AGG + chr2_4:10794955-10794974 None:intergenic 35.0%
! TTTTCCCTGATTTTTGTGTC+TGG - chr2_4:10795037-10795056 Msa0314780:CDS 35.0%
GCAATTGGGTAATGAAAACA+TGG + chr2_4:10795065-10795084 None:intergenic 35.0%
CTGGATCAAAACAAGCAATT+GGG + chr2_4:10795079-10795098 None:intergenic 35.0%
GCAAAACCAGTTATCACTTA+AGG + chr2_4:10795172-10795191 None:intergenic 35.0%
! GTCTTGCAAAAGTAGTTTGT+CGG + chr2_4:10795302-10795321 None:intergenic 35.0%
!! TGAAAAAGTGTTTCCTCCTT+TGG - chr2_4:10795379-10795398 Msa0314780:intron 35.0%
CGACAAATATTTACCAAAGG+AGG + chr2_4:10795395-10795414 None:intergenic 35.0%
AAATTCAGACATATCTTCCG+AGG - chr2_4:10795544-10795563 Msa0314780:intron 35.0%
GATGAACATGTTTCTTGTTG+AGG - chr2_4:10795627-10795646 Msa0314780:intron 35.0%
! GTTGTAAGTAGATGCCTTTT+GGG + chr2_4:10795704-10795723 None:intergenic 35.0%
! AGTTGTAAGTAGATGCCTTT+TGG + chr2_4:10795705-10795724 None:intergenic 35.0%
!! AAAAGGCATCTACTTACAAC+TGG - chr2_4:10795704-10795723 Msa0314780:intron 35.0%
AACAAATTAATGAGGTCGAG+AGG + chr2_4:10795837-10795856 None:intergenic 35.0%
TCAAGTGCATCTTCTTCAAT+AGG - chr2_4:10796044-10796063 Msa0314780:CDS 35.0%
GAAAAGAACCAATTGCTTCT+TGG - chr2_4:10796070-10796089 Msa0314780:CDS 35.0%
TCAAGTGATAGTATGCACTT+GGG - chr2_4:10796142-10796161 Msa0314780:CDS 35.0%
GAAAATAGTGAAACGGCTAT+TGG + chr2_4:10796200-10796219 None:intergenic 35.0%
CTAGTTATTATTGCATACCG+TGG + chr2_4:10796229-10796248 None:intergenic 35.0%
GCTTTAACATACTTCGTCAA+GGG + chr2_4:10796346-10796365 None:intergenic 35.0%
! AGCTTTAACATACTTCGTCA+AGG + chr2_4:10796347-10796366 None:intergenic 35.0%
TATCATACTCGAGTTTCAGT+TGG - chr2_4:10796370-10796389 Msa0314780:intron 35.0%
AGATACATGGGTACAATAAC+TGG - chr2_4:10796598-10796617 Msa0314780:intron 35.0%
TCTTTACTTTAACTGCTTGC+AGG - chr2_4:10797125-10797144 Msa0314780:CDS 35.0%
! GGCATGAAAGATGATGATTT+TGG - chr2_4:10797146-10797165 Msa0314780:intron 35.0%
!! ATCGGTTTGCATATTAAGCA+TGG + chr2_4:10797279-10797298 None:intergenic 35.0%
!!! TTATTTTGAAAGGCCTGTTG+AGG + chr2_4:10797461-10797480 None:intergenic 35.0%
!! TAATCAGCAGATTTCTGGTT+CGG - chr2_4:10797628-10797647 Msa0314780:intron 35.0%
AATCAGAAAAACTCTGCTGA+TGG + chr2_4:10797730-10797749 None:intergenic 35.0%
TTGTTCTTGGAAGACTCATA+AGG + chr2_4:10797835-10797854 None:intergenic 35.0%
GTTCCTGTTCAAAATTCAAC+TGG - chr2_4:10797863-10797882 Msa0314780:intron 35.0%
! CAACCAGTTGAATTTTGAAC+AGG + chr2_4:10797869-10797888 None:intergenic 35.0%
CTGTTCAAAATTCAACTGGT+TGG - chr2_4:10797867-10797886 Msa0314780:intron 35.0%
TAATGGGATGTCGAACTTTA+AGG - chr2_4:10798117-10798136 Msa0314780:intron 35.0%
AATGGGATGTCGAACTTTAA+GGG - chr2_4:10798118-10798137 Msa0314780:intron 35.0%
TCTAATTACATGAACACCAC+AGG - chr2_4:10798190-10798209 Msa0314780:intron 35.0%
AGGAAAATTCACCTTCACAA+AGG + chr2_4:10798320-10798339 None:intergenic 35.0%
TTTGGTATGTTTCTTGTTGC+AGG - chr2_4:10798403-10798422 Msa0314780:intron 35.0%
GTTTATAAATCAGGGTCCTT+CGG - chr2_4:10798425-10798444 Msa0314780:CDS 35.0%
GATGTAAGTGTACAGAAAAG+AGG + chr2_4:10798689-10798708 None:intergenic 35.0%
ATGCAATCTCTCTTATGACA+GGG - chr2_4:10798715-10798734 Msa0314780:five_prime_UTR 35.0%
CTATTTGAGAGCCTTTGAAT+TGG + chr2_4:10798833-10798852 None:intergenic 35.0%
GATTCAAGAAATCTAAGCAG+CGG - chr2_4:10798881-10798900 Msa0314780:five_prime_UTR 35.0%
ATTCAAGAAATCTAAGCAGC+GGG - chr2_4:10798882-10798901 Msa0314780:five_prime_UTR 35.0%
! TATGTTTGAATCTTTGAGGG+TGG - chr2_4:10799056-10799075 Msa0314780:five_prime_UTR 35.0%
AATTTCATCCGACAGATAAG+TGG + chr2_4:10799086-10799105 None:intergenic 35.0%
TGATAGGAGAATTTGAATGG+GGG - chr2_4:10799118-10799137 Msa0314780:five_prime_UTR 35.0%
GAGAGAGAGAAAAAAGACAG+AGG - chr2_4:10793099-10793118 Msa0314780:three_prime_UTR 40.0%
AAAAGCAAACAAGACCCAGA+AGG + chr2_4:10793403-10793422 None:intergenic 40.0%
TGAAGCGTGTAGTTGAAGAA+TGG - chr2_4:10793450-10793469 Msa0314780:CDS 40.0%
CCTTTCACCAACCAAAAAAC+TGG + chr2_4:10793579-10793598 None:intergenic 40.0%
!!! CCAGTTTTTTGGTTGGTGAA+AGG - chr2_4:10793576-10793595 Msa0314780:intron 40.0%
!!! GTTTTTTGGTTGGTGAAAGG+GGG - chr2_4:10793579-10793598 Msa0314780:intron 40.0%
!!! TTTTTTGGTTGGTGAAAGGG+GGG - chr2_4:10793580-10793599 Msa0314780:intron 40.0%
GTCCTTTGTGACAAGTTATG+AGG - chr2_4:10794310-10794329 Msa0314780:CDS 40.0%
AGAGTTGTGTACTTTCCACA+AGG - chr2_4:10794446-10794465 Msa0314780:CDS 40.0%
! GTGCTCCCTTTGAAAAATCA+TGG - chr2_4:10794527-10794546 Msa0314780:CDS 40.0%
! CTCCCTTTGAAAAATCATGG+TGG - chr2_4:10794530-10794549 Msa0314780:CDS 40.0%
TGCCTCTTCAACCACAATTT+GGG + chr2_4:10794750-10794769 None:intergenic 40.0%
ATGCCTCTTCAACCACAATT+TGG + chr2_4:10794751-10794770 None:intergenic 40.0%
GAGGTAAGCTTGGATAGTTT+GGG + chr2_4:10794933-10794952 None:intergenic 40.0%
AGTTGACAAATAAGCTGAGG+AGG + chr2_4:10794952-10794971 None:intergenic 40.0%
CCTGGATCAAAACAAGCAAT+TGG + chr2_4:10795080-10795099 None:intergenic 40.0%
!!! CCAATTGCTTGTTTTGATCC+AGG - chr2_4:10795077-10795096 Msa0314780:CDS 40.0%
ACACTGCCTTAAGTGATAAC+TGG - chr2_4:10795163-10795182 Msa0314780:intron 40.0%
TTTGCAGCAAGAGCAAAAAG+AGG - chr2_4:10795238-10795257 Msa0314780:intron 40.0%
! TAGTTTGTCGGCTGTTTACT+TGG + chr2_4:10795290-10795309 None:intergenic 40.0%
TGCTCAAGAGTTAATAGCCA+GGG - chr2_4:10795501-10795520 Msa0314780:intron 40.0%
TTAATAGCCAGGGATTTGCA+TGG - chr2_4:10795511-10795530 Msa0314780:intron 40.0%
!! AGTGCTAAAAGACTTGTTGC+TGG - chr2_4:10795743-10795762 Msa0314780:intron 40.0%
!! GTGATTCTGTGCTGTTTATC+TGG - chr2_4:10795765-10795784 Msa0314780:intron 40.0%
TTGTGTCCTGCTTATCAAAG+TGG - chr2_4:10795800-10795819 Msa0314780:intron 40.0%
TTCTTACTGACAAGTGCTTC+AGG - chr2_4:10795901-10795920 Msa0314780:CDS 40.0%
ACTATCACTTGACAGTACTG+AGG + chr2_4:10796134-10796153 None:intergenic 40.0%
GTCAAGTGATAGTATGCACT+TGG - chr2_4:10796141-10796160 Msa0314780:CDS 40.0%
! AAGGGTATGACAAATTCGGA+TGG + chr2_4:10796328-10796347 None:intergenic 40.0%
! CGTCAAGGGTATGACAAATT+CGG + chr2_4:10796332-10796351 None:intergenic 40.0%
! TTTCAGTTGGTATGCGTTTC+AGG - chr2_4:10796383-10796402 Msa0314780:intron 40.0%
AATAACTGGCATTTGTGACC+TGG - chr2_4:10796612-10796631 Msa0314780:intron 40.0%
CAAGGGGAAAGTCAATGTAA+AGG + chr2_4:10796727-10796746 None:intergenic 40.0%
ATTTCCCACAAAGACACTCT+AGG + chr2_4:10796889-10796908 None:intergenic 40.0%
AGATGACATGAAGCTAACCA+TGG + chr2_4:10796996-10797015 None:intergenic 40.0%
GCATGAATTCTCCTTTGTTG+TGG - chr2_4:10797168-10797187 Msa0314780:intron 40.0%
AAGGGATTGGGATTAATCCT+TGG - chr2_4:10797231-10797250 Msa0314780:intron 40.0%
GTTTGCATATTAAGCATGGC+GGG + chr2_4:10797275-10797294 None:intergenic 40.0%
GGTTTGCATATTAAGCATGG+CGG + chr2_4:10797276-10797295 None:intergenic 40.0%
AACCGATATGTATCAAGCTG+TGG - chr2_4:10797292-10797311 Msa0314780:CDS 40.0%
AGCCACAGCTTGATACATAT+CGG + chr2_4:10797297-10797316 None:intergenic 40.0%
TGGTTGCTGAAATTGAAGCA+AGG + chr2_4:10797378-10797397 None:intergenic 40.0%
ACAACAAACTCAACAGCAAG+TGG - chr2_4:10797598-10797617 Msa0314780:intron 40.0%
AATGAAGAGAGAGCTTGCAT+GGG + chr2_4:10797704-10797723 None:intergenic 40.0%
TAATGAAGAGAGAGCTTGCA+TGG + chr2_4:10797705-10797724 None:intergenic 40.0%
TTCTCCTTTGCACAGTATCA+TGG - chr2_4:10797778-10797797 Msa0314780:CDS 40.0%
TCTCCTTTGCACAGTATCAT+GGG - chr2_4:10797779-10797798 Msa0314780:CDS 40.0%
TCTTGGAAGACTCATAAGGT+GGG + chr2_4:10797831-10797850 None:intergenic 40.0%
TTCTTGGAAGACTCATAAGG+TGG + chr2_4:10797832-10797851 None:intergenic 40.0%
TCTTCCAAGAACAAGCTCTT+GGG - chr2_4:10797841-10797860 Msa0314780:CDS 40.0%
ATCTCAATGTATTCTGCCTC+AGG - chr2_4:10797934-10797953 Msa0314780:intron 40.0%
ATGGGATGTCGAACTTTAAG+GGG - chr2_4:10798119-10798138 Msa0314780:intron 40.0%
! AGAAGATTGATGGTAGGACA+TGG + chr2_4:10798173-10798192 None:intergenic 40.0%
! GCTGATTCTTCGTTGAATCA+TGG - chr2_4:10798214-10798233 Msa0314780:intron 40.0%
AAACCAGGTTCACCAATACT+AGG + chr2_4:10798247-10798266 None:intergenic 40.0%
TTCTTGCATACCCAGGAAAA+CGG - chr2_4:10798265-10798284 Msa0314780:intron 40.0%
!! TCACAAAGGTCTTGTTCAGT+GGG + chr2_4:10798306-10798325 None:intergenic 40.0%
!! TTCACAAAGGTCTTGTTCAG+TGG + chr2_4:10798307-10798326 None:intergenic 40.0%
ACTGAACAAGACCTTTGTGA+AGG - chr2_4:10798306-10798325 Msa0314780:intron 40.0%
! GTGAAGGTGAATTTTCCTCA+TGG - chr2_4:10798322-10798341 Msa0314780:intron 40.0%
GGAGAAGAACATCATTCTCT+CGG + chr2_4:10798577-10798596 None:intergenic 40.0%
GAGAATGATGTTCTTCTCCT+CGG - chr2_4:10798578-10798597 Msa0314780:five_prime_UTR 40.0%
CATGCAATCTCTCTTATGAC+AGG - chr2_4:10798714-10798733 Msa0314780:five_prime_UTR 40.0%
GGGAATTCGTGAATAGTGTA+TGG - chr2_4:10798735-10798754 Msa0314780:five_prime_UTR 40.0%
TGAACTCGGTTCCAATTCAA+AGG - chr2_4:10798819-10798838 Msa0314780:five_prime_UTR 40.0%
TTAGTAGTCTAGAGATCCCA+CGG + chr2_4:10798915-10798934 None:intergenic 40.0%
AAGAATGGAACATGGGGTGT+TGG - chr2_4:10793465-10793484 Msa0314780:CDS 45.0%
! AGAATGGAACATGGGGTGTT+GGG - chr2_4:10793466-10793485 Msa0314780:CDS 45.0%
AAACACATACCTTCTTGGGG+TGG + chr2_4:10793818-10793837 None:intergenic 45.0%
GGGTGTGATAATCTCGAGTT+CGG - chr2_4:10793940-10793959 Msa0314780:CDS 45.0%
TAATCTCGAGTTCGGTCAAG+AGG - chr2_4:10793948-10793967 Msa0314780:CDS 45.0%
GAACAAGTTCAAATCCTGGC+TGG + chr2_4:10794000-10794019 None:intergenic 45.0%
!! GCATTGGGATGGATTTTGCA+GGG - chr2_4:10794348-10794367 Msa0314780:CDS 45.0%
!! CATTGGGATGGATTTTGCAG+GGG - chr2_4:10794349-10794368 Msa0314780:CDS 45.0%
ACAACTCTACTTCCAACTGC+TGG + chr2_4:10794434-10794453 None:intergenic 45.0%
ACTTGTTCACTGTGACCTTG+TGG + chr2_4:10794464-10794483 None:intergenic 45.0%
GGAGAATGAAGAGACTGCAT+AGG + chr2_4:10794640-10794659 None:intergenic 45.0%
CGGAGAATTGCGTTCAAATG+CGG - chr2_4:10794715-10794734 Msa0314780:CDS 45.0%
GGCTGATATGACCCAAATTG+TGG - chr2_4:10794736-10794755 Msa0314780:CDS 45.0%
GACCCAAATTGTGGTTGAAG+AGG - chr2_4:10794745-10794764 Msa0314780:CDS 45.0%
TGTTGTTGCAGCCCAAATTG+CGG - chr2_4:10794779-10794798 Msa0314780:CDS 45.0%
!! ATGTGCATCGACTTCCTTGT+TGG + chr2_4:10794908-10794927 None:intergenic 45.0%
GGAGGTAAGCTTGGATAGTT+TGG + chr2_4:10794934-10794953 None:intergenic 45.0%
ATAAGCTGAGGAGGTAAGCT+TGG + chr2_4:10794943-10794962 None:intergenic 45.0%
GGTGCCAGACACAAAAATCA+GGG + chr2_4:10795044-10795063 None:intergenic 45.0%
! TGGTGCCAGACACAAAAATC+AGG + chr2_4:10795045-10795064 None:intergenic 45.0%
!!! TGTTTTGATCCAGGCTGATG+TGG - chr2_4:10795086-10795105 Msa0314780:intron 45.0%
TACAGCATTCAGAGGTTGCA+AGG + chr2_4:10795139-10795158 None:intergenic 45.0%
GTGTGTCATACAGCATTCAG+AGG + chr2_4:10795147-10795166 None:intergenic 45.0%
TCTTCGTAATTGTGAGCTGC+AGG - chr2_4:10795459-10795478 Msa0314780:intron 45.0%
GCTATTAACTCTTGAGCAGG+AGG + chr2_4:10795499-10795518 None:intergenic 45.0%
CTGGCTATTAACTCTTGAGC+AGG + chr2_4:10795502-10795521 None:intergenic 45.0%
CTGCTCAAGAGTTAATAGCC+AGG - chr2_4:10795500-10795519 Msa0314780:intron 45.0%
TTCGTTACCATGCAAATCCC+TGG + chr2_4:10795521-10795540 None:intergenic 45.0%
! GGGATTTGCATGGTAACGAA+TGG - chr2_4:10795521-10795540 Msa0314780:intron 45.0%
! TTCAGCTTTGTAACTCGCCT+CGG + chr2_4:10795564-10795583 None:intergenic 45.0%
! TAAGTAGATGCCTTTTGGGC+TGG + chr2_4:10795700-10795719 None:intergenic 45.0%
GGCATCTACTTACAACTGGA+TGG - chr2_4:10795708-10795727 Msa0314780:intron 45.0%
GCATGACAGATCCAAGGTAA+AGG + chr2_4:10795865-10795884 None:intergenic 45.0%
! TTGAAGGCATGACAGATCCA+AGG + chr2_4:10795871-10795890 None:intergenic 45.0%
! AAGGCATCACAGTTTGTGGT+CGG + chr2_4:10796111-10796130 None:intergenic 45.0%
! TCACTTGACAGTACTGAGGA+AGG + chr2_4:10796130-10796149 None:intergenic 45.0%
!! CAGGATGCTCTTTGAAACAG+AGG - chr2_4:10796402-10796421 Msa0314780:intron 45.0%
TTTGTGACCTGGATTCTGTC+CGG - chr2_4:10796623-10796642 Msa0314780:intron 45.0%
!!! AGCTTTTTGACTTGGATCGC+AGG - chr2_4:10796828-10796847 Msa0314780:intron 45.0%
!!! TTTTGACTTGGATCGCAGGT+TGG - chr2_4:10796832-10796851 Msa0314780:intron 45.0%
! GCAACCTAGAGTGTCTTTGT+GGG - chr2_4:10796882-10796901 Msa0314780:CDS 45.0%
TGAAGCTAACCATGGAACGA+AGG + chr2_4:10796988-10797007 None:intergenic 45.0%
TTAATCCTTGGATGCAGCCA+AGG - chr2_4:10797243-10797262 Msa0314780:intron 45.0%
AGATCCTTCCAAACAGCTTC+TGG - chr2_4:10797349-10797368 Msa0314780:intron 45.0%
GATCCTTCCAAACAGCTTCT+GGG - chr2_4:10797350-10797369 Msa0314780:intron 45.0%
ATTAAAGCAGCGGTCCTGTT+CGG + chr2_4:10797410-10797429 None:intergenic 45.0%
!! TGAGGATTAGTCTGAGCTTG+TGG + chr2_4:10797518-10797537 None:intergenic 45.0%
TGATGCTGTAGATGCTGTTG+AGG + chr2_4:10797536-10797555 None:intergenic 45.0%
! GTTGCTGCTGGTTATGATGA+CGG + chr2_4:10797580-10797599 None:intergenic 45.0%
!! GTTGAGTTTGTTGTTGCTGC+TGG + chr2_4:10797592-10797611 None:intergenic 45.0%
ACAAACTCAACAGCAAGTGG+TGG - chr2_4:10797601-10797620 Msa0314780:intron 45.0%
GAACCCATGATACTGTGCAA+AGG + chr2_4:10797785-10797804 None:intergenic 45.0%
AGGTGGGATGATTCATCATG+CGG + chr2_4:10797815-10797834 None:intergenic 45.0%
GTCTTCCAAGAACAAGCTCT+TGG - chr2_4:10797840-10797859 Msa0314780:CDS 45.0%
TCAATGTATTCTGCCTCAGG+TGG - chr2_4:10797937-10797956 Msa0314780:intron 45.0%
ATTACATTGCCACCGTTTCC+TGG - chr2_4:10798001-10798020 Msa0314780:intron 45.0%
AGTGCTCACTAGACCAAGAA+GGG - chr2_4:10798029-10798048 Msa0314780:intron 45.0%
! TCGAACTTTAAGGGGATCAG+TGG - chr2_4:10798127-10798146 Msa0314780:intron 45.0%
! TTGATGGTAGGACATGGTTG+AGG + chr2_4:10798167-10798186 None:intergenic 45.0%
CATGGAGTAACGCCTAGTAT+TGG - chr2_4:10798232-10798251 Msa0314780:intron 45.0%
TCTTGCATACCCAGGAAAAC+GGG - chr2_4:10798266-10798285 Msa0314780:intron 45.0%
GATATCCAACGATCTTCCGA+AGG + chr2_4:10798444-10798463 None:intergenic 45.0%
TATGGGATACTTACGGCCAA+GGG + chr2_4:10798610-10798629 None:intergenic 45.0%
ATATGGGATACTTACGGCCA+AGG + chr2_4:10798611-10798630 None:intergenic 45.0%
GTGGCATACCACTTATCTGT+CGG - chr2_4:10799075-10799094 Msa0314780:five_prime_UTR 45.0%
AGGAGAATTTGAATGGGGGA+AGG - chr2_4:10799122-10799141 Msa0314780:five_prime_UTR 45.0%
!! GAATGGAACATGGGGTGTTG+GGG - chr2_4:10793467-10793486 Msa0314780:CDS 50.0%
!! AATGGAACATGGGGTGTTGG+GGG - chr2_4:10793468-10793487 Msa0314780:CDS 50.0%
CCAGCTGAAGAGAGTCTCAT+TGG + chr2_4:10793785-10793804 None:intergenic 50.0%
CCAATGAGACTCTCTTCAGC+TGG - chr2_4:10793782-10793801 Msa0314780:CDS 50.0%
TTTAGTCCTCCACCCCAAGA+AGG - chr2_4:10793806-10793825 Msa0314780:intron 50.0%
!! GGCATTGGGATGGATTTTGC+AGG - chr2_4:10794347-10794366 Msa0314780:CDS 50.0%
GAACTTTGGCATGCATGTGC+TGG - chr2_4:10794392-10794411 Msa0314780:CDS 50.0%
CTGCTGGCAAAGAGACAAGA+GGG + chr2_4:10794418-10794437 None:intergenic 50.0%
ACTGCTGGCAAAGAGACAAG+AGG + chr2_4:10794419-10794438 None:intergenic 50.0%
CTTGTCTCTTTGCCAGCAGT+TGG - chr2_4:10794419-10794438 Msa0314780:CDS 50.0%
ATGGTCTACGGCCGCAATTT+GGG + chr2_4:10794793-10794812 None:intergenic 50.0%
AATGGTCTACGGCCGCAATT+TGG + chr2_4:10794794-10794813 None:intergenic 50.0%
CATCTGCGCATACACCTCAT+CGG + chr2_4:10795115-10795134 None:intergenic 50.0%
! GCTTGTGTCACTAGCAGTCA+AGG + chr2_4:10795324-10795343 None:intergenic 50.0%
GCTAGTGACACAAGCACTCA+CGG - chr2_4:10795329-10795348 Msa0314780:CDS 50.0%
CTAGTGACACAAGCACTCAC+GGG - chr2_4:10795330-10795349 Msa0314780:CDS 50.0%
TAGTGACACAAGCACTCACG+GGG - chr2_4:10795331-10795350 Msa0314780:CDS 50.0%
!!! GAAACACTTTTTCAGCCGCC+CGG + chr2_4:10795373-10795392 None:intergenic 50.0%
AGGCGTCCACTTTGATAAGC+AGG + chr2_4:10795809-10795828 None:intergenic 50.0%
AATGAGGTCGAGAGGAGAGA+AGG + chr2_4:10795829-10795848 None:intergenic 50.0%
!! GCTTCAGGCTTTGAGAAGTG+CGG - chr2_4:10795916-10795935 Msa0314780:intron 50.0%
GGCGGATACCAAGAAGCAAT+TGG + chr2_4:10796081-10796100 None:intergenic 50.0%
!! GAGGAAGGCATCACAGTTTG+TGG + chr2_4:10796115-10796134 None:intergenic 50.0%
!! ACTTGGATCGCAGGTTGGTT+GGG - chr2_4:10796837-10796856 Msa0314780:intron 50.0%
ATGAATCCACTGCCGGAGAA+AGG - chr2_4:10796860-10796879 Msa0314780:CDS 50.0%
CACTCTAGGTTGCCTTTCTC+CGG + chr2_4:10796875-10796894 None:intergenic 50.0%
! GGCAACCTAGAGTGTCTTTG+TGG - chr2_4:10796881-10796900 Msa0314780:CDS 50.0%
!! GGGAATGGTGACGGATACAT+AGG + chr2_4:10796931-10796950 None:intergenic 50.0%
CGTTTAAGCCTGAGAGGGAA+TGG + chr2_4:10796946-10796965 None:intergenic 50.0%
ACGGTCGTTTAAGCCTGAGA+GGG + chr2_4:10796951-10796970 None:intergenic 50.0%
! TTTGTTGTGGCTCCGAGACA+CGG - chr2_4:10797181-10797200 Msa0314780:intron 50.0%
TCAAACCTTGGCTGCATCCA+AGG + chr2_4:10797251-10797270 None:intergenic 50.0%
GAACCCAGAAGCTGTTTGGA+AGG + chr2_4:10797356-10797375 None:intergenic 50.0%
CAAGGAACCCAGAAGCTGTT+TGG + chr2_4:10797360-10797379 None:intergenic 50.0%
TTAAAGCAGCGGTCCTGTTC+GGG + chr2_4:10797409-10797428 None:intergenic 50.0%
!! TGCTGGTTATGATGACGGAG+TGG + chr2_4:10797575-10797594 None:intergenic 50.0%
! GGAACCCAAGAGCTTGTTCT+TGG + chr2_4:10797848-10797867 None:intergenic 50.0%
ATTGAGATGCTCCCGAAGAG+AGG + chr2_4:10797922-10797941 None:intergenic 50.0%
ATTGCCACCGTTTCCTGGTA+GGG - chr2_4:10798006-10798025 Msa0314780:intron 50.0%
GAGTGCTCACTAGACCAAGA+AGG - chr2_4:10798028-10798047 Msa0314780:intron 50.0%
CAACGAAGAATCAGCACCTG+TGG + chr2_4:10798209-10798228 None:intergenic 50.0%
!! ACGCCTAGTATTGGTGAACC+TGG - chr2_4:10798241-10798260 Msa0314780:intron 50.0%
ACCTGGTTTCTTGCATACCC+AGG - chr2_4:10798258-10798277 Msa0314780:intron 50.0%
TCCTGGGTATGCAAGAAACC+AGG + chr2_4:10798262-10798281 None:intergenic 50.0%
CTTGCATACCCAGGAAAACG+GGG - chr2_4:10798267-10798286 Msa0314780:intron 50.0%
! TCCTTGATCCCCGTTTTCCT+GGG + chr2_4:10798278-10798297 None:intergenic 50.0%
! TTCCTTGATCCCCGTTTTCC+TGG + chr2_4:10798279-10798298 None:intergenic 50.0%
GATGTTCTTCTCCTCGGTGA+TGG - chr2_4:10798584-10798603 Msa0314780:five_prime_UTR 50.0%
CATCAAGATACTTTCGCCCG+AGG - chr2_4:10798760-10798779 Msa0314780:five_prime_UTR 50.0%
!! ACATGGGGTGTTGGGGGTTA+AGG - chr2_4:10793474-10793493 Msa0314780:CDS 55.0%
CACATACCTTCTTGGGGTGG+AGG + chr2_4:10793815-10793834 None:intergenic 55.0%
GTCTCTGGATTGTTCCAGCC+AGG - chr2_4:10793983-10794002 Msa0314780:CDS 55.0%
!! GCGCAGAAAAGCACCGAGTT+AGG + chr2_4:10794870-10794889 None:intergenic 55.0%
!!! AACTCGGTGCTTTTCTGCGC+AGG - chr2_4:10794870-10794889 Msa0314780:CDS 55.0%
GGTGGCTGTGTCAACCAACA+AGG - chr2_4:10794891-10794910 Msa0314780:CDS 55.0%
!! CATCGGTTTCCACATCAGCC+TGG + chr2_4:10795098-10795117 None:intergenic 55.0%
GGCTGATGTGGAAACCGATG+AGG - chr2_4:10795098-10795117 Msa0314780:intron 55.0%
GCTTACCTTCCAGCAGAGCT+GGG - chr2_4:10795260-10795279 Msa0314780:CDS 55.0%
AGTGACACAAGCACTCACGG+GGG - chr2_4:10795332-10795351 Msa0314780:CDS 55.0%
CTCTTGAGCAGGAGGCTGTT+GGG + chr2_4:10795491-10795510 None:intergenic 55.0%
ACTCTTGAGCAGGAGGCTGT+TGG + chr2_4:10795492-10795511 None:intergenic 55.0%
CAGTTTGTGGTCGGCTAGCA+CGG + chr2_4:10796102-10796121 None:intergenic 55.0%
TCTTGCTGCAGCAGCTCATG+CGG - chr2_4:10796168-10796187 Msa0314780:intron 55.0%
CAGAGGAGTCTAGTGTGCGA+CGG - chr2_4:10796419-10796438 Msa0314780:intron 55.0%
TCCGGTGGCAGAACTCACAT+TGG - chr2_4:10796641-10796660 Msa0314780:intron 55.0%
GCCAATGTGAGTTCTGCCAC+CGG + chr2_4:10796645-10796664 None:intergenic 55.0%
GCAGAACTCACATTGGCGCT+CGG - chr2_4:10796648-10796667 Msa0314780:intron 55.0%
CTCACATTGGCGCTCGGTAA+AGG - chr2_4:10796654-10796673 Msa0314780:intron 55.0%
!! GACTTGGATCGCAGGTTGGT+TGG - chr2_4:10796836-10796855 Msa0314780:intron 55.0%
GGTTGGGATGAATCCACTGC+CGG - chr2_4:10796853-10796872 Msa0314780:CDS 55.0%
ATCCGTCACCATTCCCTCTC+AGG - chr2_4:10796935-10796954 Msa0314780:CDS 55.0%
AGCCTGAGAGGGAATGGTGA+CGG + chr2_4:10796940-10796959 None:intergenic 55.0%
CACGGTCGTTTAAGCCTGAG+AGG + chr2_4:10796952-10796971 None:intergenic 55.0%
CTCTCAGGCTTAAACGACCG+TGG - chr2_4:10796950-10796969 Msa0314780:CDS 55.0%
TGGAACGAAGGCAATCCAGG+AGG + chr2_4:10796976-10796995 None:intergenic 55.0%
CCATGGAACGAAGGCAATCC+AGG + chr2_4:10796979-10796998 None:intergenic 55.0%
CCTGGATTGCCTTCGTTCCA+TGG - chr2_4:10796976-10796995 Msa0314780:CDS 55.0%
GTGTCTCGGAGCCACAACAA+AGG + chr2_4:10797182-10797201 None:intergenic 55.0%
GAAGCCCTCTATCCGTGTCT+CGG + chr2_4:10797196-10797215 None:intergenic 55.0%
! AGCATGGCGGGATCAAACCT+TGG + chr2_4:10797263-10797282 None:intergenic 55.0%
CTGCTGCACTTCAGGACATG+AGG - chr2_4:10797318-10797337 Msa0314780:CDS 55.0%
AACCACCGAACTTCCCGAAC+AGG - chr2_4:10797393-10797412 Msa0314780:intron 55.0%
! CAGGACCGCTGCTTTAATGC+AGG - chr2_4:10797412-10797431 Msa0314780:intron 55.0%
CTGCGCCTGCATTAAAGCAG+CGG + chr2_4:10797420-10797439 None:intergenic 55.0%
! TGCATGGGTGGTGGTGATTG+AGG + chr2_4:10797689-10797708 None:intergenic 55.0%
GAAGAGAGAGCTTGCATGGG+TGG + chr2_4:10797701-10797720 None:intergenic 55.0%
GGTGGATCCACTCCTCTCTT+CGG - chr2_4:10797907-10797926 Msa0314780:intron 55.0%
GTGGATCCACTCCTCTCTTC+GGG - chr2_4:10797908-10797927 Msa0314780:intron 55.0%
TGCCTCAGGTGGAGCAGTTA+GGG - chr2_4:10797948-10797967 Msa0314780:intron 55.0%
CATTGCCACCGTTTCCTGGT+AGG - chr2_4:10798005-10798024 Msa0314780:intron 55.0%
GAGCACTCCCTACCAGGAAA+CGG + chr2_4:10798016-10798035 None:intergenic 55.0%
TCTAGTGAGCACTCCCTACC+AGG + chr2_4:10798022-10798041 None:intergenic 55.0%
GCGGATCATTGCTCCCTTCT+TGG + chr2_4:10798045-10798064 None:intergenic 55.0%
ACCCAGGAAAACGGGGATCA+AGG - chr2_4:10798274-10798293 Msa0314780:intron 55.0%
AGGGTCCTTCGGAAGATCGT+TGG - chr2_4:10798436-10798455 Msa0314780:CDS 55.0%
AGTGAGCTCGCCCGAATGTT+CGG - chr2_4:10798494-10798513 Msa0314780:five_prime_UTR 55.0%
GCCTTCCAGTCCGAACATTC+GGG + chr2_4:10798507-10798526 None:intergenic 55.0%
CGCCTTCCAGTCCGAACATT+CGG + chr2_4:10798508-10798527 None:intergenic 55.0%
TTGGAGGACCCTGTGAGATC+AGG - chr2_4:10798530-10798549 Msa0314780:five_prime_UTR 55.0%
! CCCATTTGCTGCACTTCCTC+GGG + chr2_4:10798779-10798798 None:intergenic 55.0%
! CCCGAGGAAGTGCAGCAAAT+GGG - chr2_4:10798776-10798795 Msa0314780:five_prime_UTR 55.0%
! GCCCATTTGCTGCACTTCCT+CGG + chr2_4:10798780-10798799 None:intergenic 55.0%
GTGCAGCAAATGGGCAACAC+TGG - chr2_4:10798785-10798804 Msa0314780:five_prime_UTR 55.0%
! CAAATGGGCAACACTGGCCT+CGG - chr2_4:10798791-10798810 Msa0314780:five_prime_UTR 55.0%
! AAATGGGCAACACTGGCCTC+GGG - chr2_4:10798792-10798811 Msa0314780:five_prime_UTR 55.0%
! TGGCCTCGGGCTTTTGAACT+CGG - chr2_4:10798805-10798824 Msa0314780:five_prime_UTR 55.0%
GAACCGAGTTCAAAAGCCCG+AGG + chr2_4:10798811-10798830 None:intergenic 55.0%
AAGCAGCGGGATAACAACCG+TGG - chr2_4:10798895-10798914 Msa0314780:five_prime_UTR 55.0%
AGCAGCGGGATAACAACCGT+GGG - chr2_4:10798896-10798915 Msa0314780:five_prime_UTR 55.0%
!! TCGGTGCTTTTCTGCGCAGG+TGG - chr2_4:10794873-10794892 Msa0314780:CDS 60.0%
GGCTTACCTTCCAGCAGAGC+TGG - chr2_4:10795259-10795278 Msa0314780:CDS 60.0%
GAGTTCCCAGCTCTGCTGGA+AGG + chr2_4:10795268-10795287 None:intergenic 60.0%
CTTGGAGTTCCCAGCTCTGC+TGG + chr2_4:10795272-10795291 None:intergenic 60.0%
CTCTTGCAGGCCAGCCCAAA+AGG - chr2_4:10795687-10795706 Msa0314780:intron 60.0%
TTTGTGGTCGGCTAGCACGG+CGG + chr2_4:10796099-10796118 None:intergenic 60.0%
GGAGTCTAGTGTGCGACGGT+AGG - chr2_4:10796423-10796442 Msa0314780:intron 60.0%
GTGACCTGGATTCTGTCCGG+TGG - chr2_4:10796626-10796645 Msa0314780:intron 60.0%
TCTGCCACCGGACAGAATCC+AGG + chr2_4:10796633-10796652 None:intergenic 60.0%
AGGTTGCCTTTCTCCGGCAG+TGG + chr2_4:10796869-10796888 None:intergenic 60.0%
CTTAAACGACCGTGGCCTCC+TGG - chr2_4:10796958-10796977 Msa0314780:CDS 60.0%
GAAGGCAATCCAGGAGGCCA+CGG + chr2_4:10796970-10796989 None:intergenic 60.0%
TGGCTCCGAGACACGGATAG+AGG - chr2_4:10797188-10797207 Msa0314780:intron 60.0%
GGCTCCGAGACACGGATAGA+GGG - chr2_4:10797189-10797208 Msa0314780:intron 60.0%
TGTGGCTGCTGCTGCACTTC+AGG - chr2_4:10797310-10797329 Msa0314780:CDS 60.0%
GTCCTGTTCGGGAAGTTCGG+TGG + chr2_4:10797398-10797417 None:intergenic 60.0%
GCGGTCCTGTTCGGGAAGTT+CGG + chr2_4:10797401-10797420 None:intergenic 60.0%
GCAACAGTCGCAGCCTCAAC+AGG - chr2_4:10797445-10797464 Msa0314780:intron 60.0%
GAGAGAGCTTGCATGGGTGG+TGG + chr2_4:10797698-10797717 None:intergenic 60.0%
TTGGCCGTCGAAGCGCATTG+CGG - chr2_4:10797886-10797905 Msa0314780:intron 60.0%
TCCACCGCAATGCGCTTCGA+CGG + chr2_4:10797893-10797912 None:intergenic 60.0%
GATGCTCCCGAAGAGAGGAG+TGG + chr2_4:10797917-10797936 None:intergenic 60.0%
CTGCCTCAGGTGGAGCAGTT+AGG - chr2_4:10797947-10797966 Msa0314780:intron 60.0%
TGCCCTAACTGCTCCACCTG+AGG + chr2_4:10797953-10797972 None:intergenic 60.0%
TCAGGTGGAGCAGTTAGGGC+AGG - chr2_4:10797952-10797971 Msa0314780:intron 60.0%
CACTCCCTACCAGGAAACGG+TGG + chr2_4:10798013-10798032 None:intergenic 60.0%
! GCCCGAATGTTCGGACTGGA+AGG - chr2_4:10798503-10798522 Msa0314780:five_prime_UTR 60.0%
! GTTCGGACTGGAAGGCGAGT+TGG - chr2_4:10798511-10798530 Msa0314780:five_prime_UTR 60.0%
AGGACCCTGTGAGATCAGGC+TGG - chr2_4:10798534-10798553 Msa0314780:five_prime_UTR 60.0%
GCTGCCAGCCTGATCTCACA+GGG + chr2_4:10798541-10798560 None:intergenic 60.0%
AGCTGCCAGCCTGATCTCAC+AGG + chr2_4:10798542-10798561 None:intergenic 60.0%
! TTCTCCTCGGTGATGGCCCT+TGG - chr2_4:10798591-10798610 Msa0314780:five_prime_UTR 60.0%
! GCCCGAGGAAGTGCAGCAAA+TGG - chr2_4:10798775-10798794 Msa0314780:five_prime_UTR 60.0%
!!! ACTTTTTCAGCCGCCCGGCG+AGG + chr2_4:10795368-10795387 None:intergenic 65.0%
GCTCGCCCGAATGTTCGGAC+TGG - chr2_4:10798499-10798518 Msa0314780:five_prime_UTR 65.0%
! CGGACTGGAAGGCGAGTTGG+AGG - chr2_4:10798514-10798533 Msa0314780:five_prime_UTR 65.0%
GGGGATTCTCCGTGCCTCGC+CGG - chr2_4:10795351-10795370 Msa0314780:CDS 70.0%
GGGATTCTCCGTGCCTCGCC+GGG - chr2_4:10795352-10795371 Msa0314780:CDS 70.0%
ATTCTCCGTGCCTCGCCGGG+CGG - chr2_4:10795355-10795374 Msa0314780:CDS 70.0%
GCCGTCGAAGCGCATTGCGG+TGG - chr2_4:10797889-10797908 Msa0314780:intron 70.0%
ACGGCCAAGGGCCATCACCG+AGG + chr2_4:10798598-10798617 None:intergenic 70.0%
TTCAGCCGCCCGGCGAGGCA+CGG + chr2_4:10795363-10795382 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 10793021 10799222 10793021 ID=Msa0314780;Name=Msa0314780
chr2_4 mRNA 10793021 10799222 10793021 ID=Msa0314780-mRNA-1;Parent=Msa0314780;Name=Msa0314780-mRNA-1;_AED=0.11;_eAED=0.11;_QI=764|0.84|0.85|1|1|1|14|288|894
chr2_4 exon 10793021 10793507 10793021 ID=Msa0314780-mRNA-1:exon:4185;Parent=Msa0314780-mRNA-1
chr2_4 exon 10793628 10793818 10793628 ID=Msa0314780-mRNA-1:exon:4184;Parent=Msa0314780-mRNA-1
chr2_4 exon 10793916 10795096 10793916 ID=Msa0314780-mRNA-1:exon:4183;Parent=Msa0314780-mRNA-1
chr2_4 exon 10795246 10795393 10795246 ID=Msa0314780-mRNA-1:exon:4182;Parent=Msa0314780-mRNA-1
chr2_4 exon 10795568 10795643 10795568 ID=Msa0314780-mRNA-1:exon:4181;Parent=Msa0314780-mRNA-1
chr2_4 exon 10795803 10795925 10795803 ID=Msa0314780-mRNA-1:exon:4180;Parent=Msa0314780-mRNA-1
chr2_4 exon 10796013 10796177 10796013 ID=Msa0314780-mRNA-1:exon:4179;Parent=Msa0314780-mRNA-1
chr2_4 exon 10796466 10796547 10796466 ID=Msa0314780-mRNA-1:exon:4178;Parent=Msa0314780-mRNA-1
chr2_4 exon 10796711 10796762 10796711 ID=Msa0314780-mRNA-1:exon:4177;Parent=Msa0314780-mRNA-1
chr2_4 exon 10796843 10796998 10796843 ID=Msa0314780-mRNA-1:exon:4176;Parent=Msa0314780-mRNA-1
chr2_4 exon 10797088 10797144 10797088 ID=Msa0314780-mRNA-1:exon:4175;Parent=Msa0314780-mRNA-1
chr2_4 exon 10797253 10797351 10797253 ID=Msa0314780-mRNA-1:exon:4174;Parent=Msa0314780-mRNA-1
chr2_4 exon 10797762 10797874 10797762 ID=Msa0314780-mRNA-1:exon:4173;Parent=Msa0314780-mRNA-1
chr2_4 exon 10798416 10799222 10798416 ID=Msa0314780-mRNA-1:exon:4172;Parent=Msa0314780-mRNA-1
chr2_4 five_prime_UTR 10798459 10799222 10798459 ID=Msa0314780-mRNA-1:five_prime_utr;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10798416 10798458 10798416 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10797762 10797874 10797762 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10797253 10797351 10797253 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10797088 10797144 10797088 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10796843 10796998 10796843 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10796711 10796762 10796711 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10796466 10796547 10796466 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10796013 10796177 10796013 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10795803 10795925 10795803 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10795568 10795643 10795568 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10795246 10795393 10795246 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10793916 10795096 10793916 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10793628 10793818 10793628 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 CDS 10793309 10793507 10793309 ID=Msa0314780-mRNA-1:cds;Parent=Msa0314780-mRNA-1
chr2_4 three_prime_UTR 10793021 10793308 10793021 ID=Msa0314780-mRNA-1:three_prime_utr;Parent=Msa0314780-mRNA-1
Gene Sequence

>Msa0314780

ATGAGACTCTCTTCAGCTGGTTTTAGTCCTCCACCCCAAGAAGGGGAAAAGAGAGTTCTAGATTCAGAACTTTGGCATGCATGTGCTGGCCCTCTTGTCTCTTTGCCAGCAGTTGGAAGTAGAGTTGTGTACTTTCCACAAGGTCACAGTGAACAAGTGGCTGTGTCAACCAACAAGGAAGTCGATGCACATATCCCAAACTATCCAAGCTTACCTCCTCAGCTTATTTGTCAACTTCATAATTTGACTATGCATGCTGATGTGGAAACCGATGAGGTGTATGCGCAGATGACCTTGCAACCTCTGAATGCTCAAGAGCAAAAAGAGGCTTACCTTCCAGCAGAGCTGGGAACTCCAAGTAAACAGCCGACAAACTACTTTTGCAAGACCTTGACTGCTAGTGACACAAGCACTCACGGGGGATTCTCCGTGCCTCGCCGGGCGGCTGAAAAAGTGTTTCCTCCTTTGGATTTCTCCCAACAGCCTCCTGCTCAAGAGTTAATAGCCAGGGATTTGCATGGCCAGCCCAAAAGGCATCTACTTACAACTGGATGGAGTGTTTTTGTGAGTGCTAAAAGACTTGTTGCTGGTGATTCTGTGCTGAATGAAAAGAACCAATTGCTTCTTGGTATCCGCCGTGCTAGCCGACCACAAACTGTGATGCCTTCCTCAGTACTGTCAAGTGATAGTATGCACTTGGGACTTCTTGCTGCAGCAGCTCATGCGGCTGCAACCAATAGCCGTTTCACTATTTTCTATAACCCACGTGCGTGTCCATCCGAATTTGTCATACCCTTGACGAAGTATGTTAAAGCTGTGTATCATACTCGAGTTTCAGTTGGTATGCGTTTCAGGATGCTCTTTGAAACAGAGGAGTCTAGTGTGCGACGATACATGGGTACAATAACTGGCATTTGTGACCTGGATTCTGTCCGGTGGCAGAACTCACATTGGCGCTCGGTAAAGGTTGGTTGGGATGAATCCACTGCCGGAGAAAGGCAACCTAGAGTGTCTTTGTGGGAAATCGAGCCATTAACAACATTTCCTATGTATCCGTCACCATTCCCTCTCAGGCTTAAACGACCGTGGCCTCCTGGATTGCCTTCGTTCCATGGCATGAAAGATGATGATTTTGGCATGAATTCTCCTTTGTTGTGGCTCCGAGACACGGATAGAGGGCTTCAATCTCTTAATTATCAAGGGATTGGGATTAATCCTTGGATGCAGCCAAGGTTTGATCCCGCCATGCTTAATATGCAAACCGATATGTATCAAGCTGTGGCTGCTGCTGCACTTCAGGACATGAGGACTGTAGTAGATCCTTCCAAACAGCTTCTGGGTTCCTTGCTTCAATTTCAGCAACCACCGAACTTCCCGAACAGGACCGCTGCTTTAATGCAGGCGCAGATGTTGCAACAGTCGCAGCCTCAACAGGCCTTTCAAAATAATAATCAGGAGAGTCAAAATCTGTCGCAATCTCAGCCACAAGCTCAGACTAATCCTCAACAGCATCTACAGCATCAGCACTCATTCAATAATCCACTCCGTCATCATAACCAGCAGCAACAACAAACTCAACAGCAAGTGGTGGATAATAATCAGCAGATTTCTGGTTCGGTCTCTACAATGTCTCAGTTTGTTTCAGCGACTCAACCTCAATCACCACCACCCATGCAAGCTCTCTCTTCATTATGCCATCAGCAGAGTTTTTCTGATTCAAATGTGAACTCTTCAACTACTATTGTTTCTCCTTTGCACAGTATCATGGGTTCATCGTTTCCGCATGATGAATCATCCCACCTTATGAGTCTTCCAAGAACAAGCTCTTGGGTTCCTGTTCAAAATTCAACTGGTTGGCCGTCGAAGCGCATTGCGGTGGATCCACTCCTCTCTTCGGGAGCATCTCAATGTATTCTGCCTCAGGTGGAGCAGTTAGGGCAGGCACAGAATTCATTGTCTCAAAATGTTATTACATTGCCACCGTTTCCTGGTAGGGAGTGCTCACTAGACCAAGAAGGGAGCAATGATCCGCAAAGTAATCTTTTATTCGGTGTCAATATAGATCCCTCATCTCTTCTAATGCATAATGGGATGTCGAACTTTAAGGGGATCAGTGGCAACAACAATGATTCCTCAACCATGTCCTACCATCAATCTTCTAATTACATGAACACCACAGGTGCTGATTCTTCGTTGAATCATGGAGTAACGCCTAGTATTGGTGAACCTGGTTTCTTGCATACCCAGGAAAACGGGGATCAAGGAAACAACCCACTGAACAAGACCTTTGTGAAGGTTTATAAATCAGGGTCCTTCGGAAGATCGTTGGATATCACTAAATTCAGCAGCTACAATGAGCTGCGTAGTGAGCTCGCCCGAATGTTCGGACTGGAAGGCGAGTTGGAGGACCCTGTGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGAGAGAATGATGTTCTTCTCCTCGGTGATGGCCCTTGGCCGGAATTCGTGAATAGTGTATGGTGCATCAAGATACTTTCGCCCGAGGAAGTGCAGCAAATGGGCAACACTGGCCTCGGGCTTTTGAACTCGGTTCCAATTCAAAGGCTCTCAAATAGCATTTGTGATGACTATGTGAGCCGTCAAGATTCAAGAAATCTAAGCAGCGGGATAACAACCGTGGGATCTCTAGACTACTAA
Protein sequence

>Msa0314780

MRLSSAGFSPPPQEGEKRVLDSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNLTMHADVETDEVYAQMTLQPLNAQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGQPKRHLLTTGWSVFVSAKRLVAGDSVLNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRACPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPSFHGMKDDDFGMNSPLLWLRDTDRGLQSLNYQGIGINPWMQPRFDPAMLNMQTDMYQAVAAAALQDMRTVVDPSKQLLGSLLQFQQPPNFPNRTAALMQAQMLQQSQPQQAFQNNNQESQNLSQSQPQAQTNPQQHLQHQHSFNNPLRHHNQQQQQTQQQVVDNNQQISGSVSTMSQFVSATQPQSPPPMQALSSLCHQQSFSDSNVNSSTTIVSPLHSIMGSSFPHDESSHLMSLPRTSSWVPVQNSTGWPSKRIAVDPLLSSGASQCILPQVEQLGQAQNSLSQNVITLPPFPGRECSLDQEGSNDPQSNLLFGVNIDPSSLLMHNGMSNFKGISGNNNDSSTMSYHQSSNYMNTTGADSSLNHGVTPSIGEPGFLHTQENGDQGNNPLNKTFVKVYKSGSFGRSLDITKFSSYNELRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEVQQMGNTGLGLLNSVPIQRLSNSICDDYVSRQDSRNLSSGITTVGSLDY*