Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315110 | XP_003593218.2 | 95.854 | 796 | 31 | 1 | 7 | 800 | 11 | 806 | 0.0 | 1442 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315110 | sp|Q9LME6|MBD8_ARATH | 45.752 | 153 | 61 | 3 | 133 | 263 | 238 | 390 | 4.75e-33 | 137 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0315110 | TF | C2H2 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315110 | MtrunA17_Chr2g0279291 | 95.854 | 796 | 31 | 1 | 7 | 800 | 11 | 806 | 0.0 | 1442 |
| Msa0315110 | MtrunA17_Chr3g0115871 | 38.060 | 268 | 117 | 10 | 47 | 271 | 56 | 317 | 2.07e-29 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0315110 | AT1G22310.1 | 45.752 | 153 | 61 | 3 | 133 | 263 | 139 | 291 | 1.09e-34 | 138 |
| Msa0315110 | AT1G22310.2 | 45.752 | 153 | 61 | 3 | 133 | 263 | 238 | 390 | 4.83e-34 | 137 |
Find 230 sgRNAs with CRISPR-Local
Find 371 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGTTAATCTTACCTATA+TGG | 0.176238 | 2_4:+11294046 | Msa0315110:intron |
| CGATTTCGCGTGTAGATTTA+AGG | 0.177513 | 2_4:-11294358 | None:intergenic |
| GTTGAGGGGTTTGATCATTC+TGG | 0.186677 | 2_4:+11296885 | Msa0315110:CDS |
| AATAAGAGTGACTTGAAAAT+TGG | 0.224444 | 2_4:+11297044 | Msa0315110:CDS |
| ACAAGAAGTTATGTTAAATA+TGG | 0.243118 | 2_4:+11298037 | Msa0315110:CDS |
| TCCATTCGGTGAACAGAAAA+TGG | 0.251866 | 2_4:+11296644 | Msa0315110:CDS |
| ATTGTTGATGCTTCTGATTT+TGG | 0.254403 | 2_4:+11294860 | Msa0315110:CDS |
| AAGGAGGAAGAGGAGTTGTT+AGG | 0.257264 | 2_4:+11294785 | Msa0315110:CDS |
| GATTGATTTGGCGGCGTTAT+CGG | 0.268030 | 2_4:+11294712 | Msa0315110:CDS |
| GAGAAGGACGGAGGGGTTAA+AGG | 0.270308 | 2_4:+11294766 | Msa0315110:CDS |
| AGGAGGAAGAGGAGTTGTTA+GGG | 0.296961 | 2_4:+11294786 | Msa0315110:CDS |
| AAAGAATCCAAAGATTGTTC+TGG | 0.310627 | 2_4:-11297176 | None:intergenic |
| AGAAGAGAAAATCCAGCTTT+TGG | 0.314324 | 2_4:+11298698 | Msa0315110:three_prime_UTR |
| ATTCAAGGAAATTGCCTTGC+TGG | 0.314369 | 2_4:+11296134 | Msa0315110:CDS |
| TTTATTGCCGCAGATATATA+AGG | 0.318369 | 2_4:+11294948 | Msa0315110:CDS |
| AGTCCCTTGCTTCATTCATC+TGG | 0.322751 | 2_4:+11296933 | Msa0315110:CDS |
| GGTATCCCCAGAACAATCTT+TGG | 0.329312 | 2_4:+11297169 | Msa0315110:CDS |
| CCTTTACCTTCAGAAGTATC+AGG | 0.329892 | 2_4:-11296846 | None:intergenic |
| AGAAAATGTGGTCCAATCTA+AGG | 0.338186 | 2_4:+11297133 | Msa0315110:CDS |
| TTGAGGGGTTTGATCATTCT+GGG | 0.341962 | 2_4:+11296886 | Msa0315110:CDS |
| TCCTCATTGACAGGGGTTCC+AGG | 0.343875 | 2_4:+11297881 | Msa0315110:intron |
| TTGATATTCTCCAGTCCTAA+TGG | 0.345479 | 2_4:+11295877 | Msa0315110:intron |
| ACCAGACACATTTGAGTTAG+TGG | 0.353621 | 2_4:-11296091 | None:intergenic |
| GCTTCGGAATCCTTCAATTC+CGG | 0.357751 | 2_4:+11294571 | Msa0315110:CDS |
| GGAAATTGCCTTGCTGGAAA+TGG | 0.362080 | 2_4:+11296140 | Msa0315110:CDS |
| TTCTGTTGCCCGCGAGGAGC+AGG | 0.367007 | 2_4:+11296050 | Msa0315110:CDS |
| TTCTGGTTGCACTAATACTA+AGG | 0.367939 | 2_4:+11296992 | Msa0315110:CDS |
| GAGGAGAGCTGAAGATTTGC+CGG | 0.368944 | 2_4:+11296419 | Msa0315110:CDS |
| TCAGTAGTCACTCTCTGTTC+CGG | 0.374463 | 2_4:-11296003 | None:intergenic |
| TTTGGTGATGTGTTGCCTTT+GGG | 0.376749 | 2_4:+11294878 | Msa0315110:CDS |
| AATTTCAACTTCACTGTTTG+CGG | 0.382763 | 2_4:+11294195 | Msa0315110:five_prime_UTR |
| TCCTTCACCTCCGGAATTGA+AGG | 0.383220 | 2_4:-11294581 | None:intergenic |
| TTTGTTAATCTTACCTATAT+GGG | 0.385161 | 2_4:+11294047 | Msa0315110:intron |
| GAGTGATTTGGTTGGGCAGT+GGG | 0.390198 | 2_4:+11294814 | Msa0315110:CDS |
| GCCGGGTCAGCCTAATGTCC+TGG | 0.392917 | 2_4:+11296437 | Msa0315110:CDS |
| TGAGTGATTTGGTTGGGCAG+TGG | 0.396024 | 2_4:+11294813 | Msa0315110:CDS |
| GGGGAAGTAGGAGGAGGAAG+AGG | 0.404028 | 2_4:+11294834 | Msa0315110:CDS |
| TATCTTCTAACCTCAATTCC+TGG | 0.404525 | 2_4:-11297899 | None:intergenic |
| GTTGATAGAGTGCTCAATTA+TGG | 0.408438 | 2_4:+11298722 | Msa0315110:three_prime_UTR |
| CGTCTCTAATGAACGATTCA+AGG | 0.411445 | 2_4:+11296119 | Msa0315110:CDS |
| TCTTGATGTGTCAACTGAAT+TGG | 0.411782 | 2_4:+11297962 | Msa0315110:CDS |
| TGTTGTAATTGTCTTAGTCT+TGG | 0.412694 | 2_4:+11298885 | Msa0315110:three_prime_UTR |
| ACCGAAAGTGAAAACTCATT+TGG | 0.414064 | 2_4:+11294658 | Msa0315110:CDS |
| CTCGCTATCTCCGCCGCAAA+CGG | 0.418387 | 2_4:-11294746 | None:intergenic |
| TCCAAGAAGAGTGAAAATTC+TGG | 0.419209 | 2_4:+11296975 | Msa0315110:CDS |
| GACAGAAACTGCTGTCCATT+AGG | 0.421132 | 2_4:-11295892 | None:intergenic |
| TTGGGCAGTGGGGAAGTAGG+AGG | 0.422115 | 2_4:+11294825 | Msa0315110:CDS |
| AGCTTCTTCTTAGTTTGAAA+AGG | 0.426234 | 2_4:+11294906 | Msa0315110:CDS |
| GTCTAAAGATGGCCAGCATT+TGG | 0.427912 | 2_4:-11298218 | None:intergenic |
| GATGGAGTTATAATTAAAGA+TGG | 0.429529 | 2_4:+11296309 | Msa0315110:CDS |
| CTTCTCTGATGAACTGTTTG+AGG | 0.429943 | 2_4:-11294526 | None:intergenic |
| TGCTCAAAACTCTATTATAG+AGG | 0.430329 | 2_4:+11296530 | Msa0315110:CDS |
| CGGGCAACAGAAGCAGCAGC+AGG | 0.430626 | 2_4:-11296039 | None:intergenic |
| GTCATGTTGGGATTCATGTT+AGG | 0.439001 | 2_4:+11296388 | Msa0315110:CDS |
| CCAACCGCAATTTCTGAAAC+AGG | 0.442236 | 2_4:-11296591 | None:intergenic |
| AAACGGTGTTGTGATTGATT+TGG | 0.447212 | 2_4:+11294700 | Msa0315110:CDS |
| TCCATCTTCGTGATCCTTGA+AGG | 0.449923 | 2_4:-11296492 | None:intergenic |
| TGGTTGGGCAGTGGGGAAGT+AGG | 0.452036 | 2_4:+11294822 | Msa0315110:CDS |
| GCCACTAACTCAAATGTGTC+TGG | 0.452185 | 2_4:+11296090 | Msa0315110:CDS |
| AAGAATCCAAAGATTGTTCT+GGG | 0.453262 | 2_4:-11297175 | None:intergenic |
| TCCTCTATTGTTCCATCCAT+CGG | 0.454254 | 2_4:-11296729 | None:intergenic |
| GAATTTCCATTGGCATTGCC+TGG | 0.455401 | 2_4:+11294602 | Msa0315110:CDS |
| AAGGAGTGAAAATGTACTTC+CGG | 0.455412 | 2_4:+11295984 | Msa0315110:CDS |
| TCTTCTGCTCCCAGGACATT+AGG | 0.455500 | 2_4:-11296447 | None:intergenic |
| CATTACACACTAGTTGTGTA+TGG | 0.456408 | 2_4:-11298926 | None:intergenic |
| CTCTTCCTCACTTCACCACC+AGG | 0.456452 | 2_4:-11294620 | None:intergenic |
| CTTGGTTCATCCGTTTCAGA+TGG | 0.457726 | 2_4:+11296291 | Msa0315110:CDS |
| GGAGGGGTTAAAGGAGGAAG+AGG | 0.459659 | 2_4:+11294775 | Msa0315110:CDS |
| GGACCCAGCGCTGTGGTTGA+AGG | 0.460801 | 2_4:-11294405 | None:intergenic |
| AAAACACTTTATGACAGAAC+TGG | 0.462546 | 2_4:-11296344 | None:intergenic |
| GCGGTGGTCGGAGGGGAGAG+TGG | 0.463550 | 2_4:-11294489 | None:intergenic |
| GACAGGGGTTCCAGGAATTG+AGG | 0.466880 | 2_4:+11297889 | Msa0315110:intron |
| CTTAGTTTGAAAAGGAAAGA+TGG | 0.472588 | 2_4:+11294914 | Msa0315110:CDS |
| CGGTGTTGTGATTGATTTGG+CGG | 0.473620 | 2_4:+11294703 | Msa0315110:CDS |
| AATTATAACTCCATCTGAAA+CGG | 0.473735 | 2_4:-11296301 | None:intergenic |
| TCAACCTTCAACCACAGCGC+TGG | 0.476614 | 2_4:+11294401 | Msa0315110:CDS |
| GAAATACAATCAGATTCCGT+TGG | 0.478566 | 2_4:+11298131 | Msa0315110:CDS |
| TTATATGCATTATACCTTGT+CGG | 0.478687 | 2_4:-11297213 | None:intergenic |
| GCGCTGTGGTTGAAGGTTGA+TGG | 0.479110 | 2_4:-11294398 | None:intergenic |
| CTCTGGTCAAATCAATGTGT+TGG | 0.479845 | 2_4:+11298184 | Msa0315110:CDS |
| TTTGGCGGCGTTATCGGAGG+TGG | 0.480395 | 2_4:+11294718 | Msa0315110:CDS |
| CTTACGAATAAACAGGATTG+TGG | 0.480599 | 2_4:-11298816 | None:intergenic |
| GAAGTGAGGAAGAGGAAGAG+AGG | 0.480995 | 2_4:+11294629 | Msa0315110:CDS |
| CCCAGGACATTAGGCTGACC+CGG | 0.482805 | 2_4:-11296438 | None:intergenic |
| TGTAATTGTCTTAGTCTTGG+AGG | 0.484027 | 2_4:+11298888 | Msa0315110:three_prime_UTR |
| GAAGGTGTCTCATCCGTGAC+TGG | 0.485030 | 2_4:-11296474 | None:intergenic |
| TCGGAGGGGAGAGTGGGAGT+TGG | 0.485461 | 2_4:-11294482 | None:intergenic |
| AAGTGAGGAAGAGGAAGAGA+GGG | 0.486983 | 2_4:+11294630 | Msa0315110:CDS |
| AGGGGTTAGAAACCTTAGAT+TGG | 0.489305 | 2_4:-11297145 | None:intergenic |
| CGTCGCTACAATAGTCATGT+TGG | 0.489692 | 2_4:+11296375 | Msa0315110:CDS |
| GAAGTAGGAGGAGGAAGAGG+AGG | 0.489968 | 2_4:+11294837 | Msa0315110:CDS |
| AAAGGAAAGATGGTCGTGCT+TGG | 0.491157 | 2_4:+11294924 | Msa0315110:CDS |
| ACAATACTACATGATCATAT+CGG | 0.491248 | 2_4:-11298843 | None:intergenic |
| TAGTCTTGGAGGCCGTTCAA+TGG | 0.491740 | 2_4:+11298899 | Msa0315110:three_prime_UTR |
| TCCTTCAATTCCGGAGGTGA+AGG | 0.492334 | 2_4:+11294580 | Msa0315110:CDS |
| TTTGACACTATTTGAAAGAA+GGG | 0.493665 | 2_4:+11294077 | Msa0315110:five_prime_UTR |
| CCGAGTAGTTGATGCAAAGA+TGG | 0.494465 | 2_4:+11296767 | Msa0315110:CDS |
| GTCAAACACAAGTCCCATAT+AGG | 0.495149 | 2_4:-11294060 | None:intergenic |
| TTACGAATAAACAGGATTGT+GGG | 0.495318 | 2_4:-11298815 | None:intergenic |
| GTTTGACACTATTTGAAAGA+AGG | 0.497444 | 2_4:+11294076 | Msa0315110:five_prime_UTR |
| GTCGCTACAATAGTCATGTT+GGG | 0.498127 | 2_4:+11296376 | Msa0315110:CDS |
| TCTTCTGATGAATAGACAAC+AGG | 0.501464 | 2_4:-11296251 | None:intergenic |
| GGCAGTGGGGAAGTAGGAGG+AGG | 0.502422 | 2_4:+11294828 | Msa0315110:CDS |
| AGTTCGACACTGTTGAGCTT+CGG | 0.505502 | 2_4:+11294555 | Msa0315110:CDS |
| TGAGGAAGAGGAAGAGAGGG+AGG | 0.505615 | 2_4:+11294633 | Msa0315110:CDS |
| AGCTCACAACCACATGTGTA+TGG | 0.505650 | 2_4:+11298072 | Msa0315110:CDS |
| ATCGATGATGATGCGGTGGT+CGG | 0.506767 | 2_4:-11294501 | None:intergenic |
| TTTCAGAATTAACAGCATCA+TGG | 0.507095 | 2_4:-11298112 | None:intergenic |
| TATCATTTCTCTTAACAAAG+AGG | 0.508422 | 2_4:-11293851 | None:intergenic |
| GGAGGTGGAGCATCCGTTTG+CGG | 0.516406 | 2_4:+11294733 | Msa0315110:CDS |
| GATGTGGCGCTGACTGTTGA+GGG | 0.517199 | 2_4:+11296870 | Msa0315110:CDS |
| AACATAGAAGAAGATGAAGA+AGG | 0.517254 | 2_4:+11294229 | Msa0315110:exon |
| AGGAGAGCTGAAGATTTGCC+GGG | 0.517482 | 2_4:+11296420 | Msa0315110:CDS |
| TGCTGCTTCTGTTGCCCGCG+AGG | 0.518233 | 2_4:+11296044 | Msa0315110:CDS |
| AACGATTACCAGTCTAAAGA+TGG | 0.519030 | 2_4:-11298229 | None:intergenic |
| CGGTGGTCGGAGGGGAGAGT+GGG | 0.519469 | 2_4:-11294488 | None:intergenic |
| AGCTCAACAGTGTCGAACTT+CGG | 0.519517 | 2_4:-11294551 | None:intergenic |
| AAAATGGAAAAGAGCTTGAC+TGG | 0.520687 | 2_4:+11296660 | Msa0315110:CDS |
| AGAAGAATCAACGGTTCAGA+TGG | 0.521404 | 2_4:+11294253 | Msa0315110:CDS |
| GTCCCTTGCTTCATTCATCT+GGG | 0.522300 | 2_4:+11296934 | Msa0315110:CDS |
| CAACCTTCAACCACAGCGCT+GGG | 0.522768 | 2_4:+11294402 | Msa0315110:CDS |
| GGAGGTGAAGGAATTTCCAT+TGG | 0.522903 | 2_4:+11294592 | Msa0315110:CDS |
| TTCATGTTAGGAATTATTTG+AGG | 0.525350 | 2_4:+11296400 | Msa0315110:CDS |
| AATGGAAATTCCTTCACCTC+CGG | 0.525587 | 2_4:-11294590 | None:intergenic |
| ACCTTCAAGGATCACGAAGA+TGG | 0.528471 | 2_4:+11296491 | Msa0315110:CDS |
| TATTATAGAGGATTCTATCA+TGG | 0.528948 | 2_4:+11296542 | Msa0315110:CDS |
| ACAACGAGGCGGTATCGACT+TGG | 0.529675 | 2_4:+11296273 | Msa0315110:CDS |
| CTTGAATCGTTCATTAGAGA+CGG | 0.533348 | 2_4:-11296118 | None:intergenic |
| CCATCTTTGCATCAACTACT+CGG | 0.533570 | 2_4:-11296767 | None:intergenic |
| CCGGGTCAGCCTAATGTCCT+GGG | 0.533615 | 2_4:+11296438 | Msa0315110:CDS |
| ATCTAAGGTTTCTAACCCCT+CGG | 0.534183 | 2_4:+11297148 | Msa0315110:CDS |
| CGCGACATCGACGGTGAGGA+CGG | 0.534354 | 2_4:-11294442 | None:intergenic |
| GACAGTGGATCACCAAATGC+TGG | 0.535223 | 2_4:+11298206 | Msa0315110:CDS |
| CCTGTTTCAGAAATTGCGGT+TGG | 0.535860 | 2_4:+11296591 | Msa0315110:CDS |
| AAACTTCGATATATCTATGC+AGG | 0.536888 | 2_4:-11298747 | None:intergenic |
| TCTGGTTGCACTAATACTAA+GGG | 0.537167 | 2_4:+11296993 | Msa0315110:CDS |
| TGATGTGGCGCTGACTGTTG+AGG | 0.537401 | 2_4:+11296869 | Msa0315110:CDS |
| AGGACGGGAGTAGGTGCGGT+GGG | 0.537864 | 2_4:-11294426 | None:intergenic |
| ACCGATGGATGGAACAATAG+AGG | 0.540164 | 2_4:+11296728 | Msa0315110:CDS |
| TCGTTGGTCCTGCTCCTCGC+GGG | 0.541414 | 2_4:-11296058 | None:intergenic |
| ATAAATGCTGAGTCTCCATT+CGG | 0.543577 | 2_4:+11296630 | Msa0315110:CDS |
| GCATATTAATAGTGATCTAT+CGG | 0.544643 | 2_4:+11299016 | Msa0315110:three_prime_UTR |
| GAGATAGCGAGAAGGACGGA+GGG | 0.546960 | 2_4:+11294758 | Msa0315110:CDS |
| TCACGGATGAGACACCTTCA+AGG | 0.549275 | 2_4:+11296478 | Msa0315110:CDS |
| GAAAGTGAAAACTCATTTGG+AGG | 0.549402 | 2_4:+11294661 | Msa0315110:CDS |
| GTGATGTGTTGCCTTTGGGA+TGG | 0.549426 | 2_4:+11294882 | Msa0315110:CDS |
| ATTCATGTGTCCAGTTTGCA+AGG | 0.549705 | 2_4:+11298154 | Msa0315110:CDS |
| CAGCTTGACCTTTGATGAGA+AGG | 0.551090 | 2_4:+11296212 | Msa0315110:CDS |
| GGCAACAGAAGCAGCAGCAG+GGG | 0.553512 | 2_4:-11296037 | None:intergenic |
| CTGGAGACTCTTCTGCTCCC+AGG | 0.553635 | 2_4:-11296455 | None:intergenic |
| GTCGTTGGTCCTGCTCCTCG+CGG | 0.554081 | 2_4:-11296059 | None:intergenic |
| GCGACATCGACGGTGAGGAC+GGG | 0.557766 | 2_4:-11294441 | None:intergenic |
| AGTGATTTGGTTGGGCAGTG+GGG | 0.558863 | 2_4:+11294815 | Msa0315110:CDS |
| CCTGATACTTCTGAAGGTAA+AGG | 0.558865 | 2_4:+11296846 | Msa0315110:CDS |
| ATATGCATCCTTCTCATCAA+AGG | 0.563994 | 2_4:-11296220 | None:intergenic |
| AATCAACGGTTCAGATGGAA+TGG | 0.565745 | 2_4:+11294258 | Msa0315110:CDS |
| GATACCTGTTTCAGAAATTG+CGG | 0.569571 | 2_4:+11296587 | Msa0315110:CDS |
| ATGATGATGCGGTGGTCGGA+GGG | 0.570896 | 2_4:-11294497 | None:intergenic |
| GCCAACTTCTAAAGAAAATG+TGG | 0.571874 | 2_4:+11297121 | Msa0315110:CDS |
| GCGTGTAGATTTAAGGTCGA+AGG | 0.574947 | 2_4:-11294351 | None:intergenic |
| ACTCTATCAACTCCAAAAGC+TGG | 0.574976 | 2_4:-11298710 | None:intergenic |
| AGAGTGGGAGTTGGAAGAAG+CGG | 0.576797 | 2_4:-11294473 | None:intergenic |
| GAGGACGGGAGTAGGTGCGG+TGG | 0.578919 | 2_4:-11294427 | None:intergenic |
| AATGCTGGCCATCTTTAGAC+TGG | 0.579372 | 2_4:+11298221 | Msa0315110:exon |
| GGTGAGGACGGGAGTAGGTG+CGG | 0.580114 | 2_4:-11294430 | None:intergenic |
| TCTGGGAATCACATGAAACC+TGG | 0.581198 | 2_4:+11296951 | Msa0315110:CDS |
| TTCTGCATTCAGCTCCGACA+AGG | 0.583172 | 2_4:+11297199 | Msa0315110:CDS |
| GATTGTTCTGGGGATACCGA+GGG | 0.583211 | 2_4:-11297164 | None:intergenic |
| TCACCACCAGGCAATGCCAA+TGG | 0.583467 | 2_4:-11294608 | None:intergenic |
| GATGATGATGCGGTGGTCGG+AGG | 0.583551 | 2_4:-11294498 | None:intergenic |
| CGTGTATTTGCACATCTGCA+AGG | 0.583614 | 2_4:-11296167 | None:intergenic |
| CACAGTTACAAATCACTCAA+AGG | 0.590461 | 2_4:+11295965 | Msa0315110:CDS |
| GAAGAAGGAAGAAGAATCAA+CGG | 0.590986 | 2_4:+11294244 | Msa0315110:CDS |
| GTGTATGGAGTTCCATTGAA+CGG | 0.593102 | 2_4:-11298911 | None:intergenic |
| GGGCAACAGAAGCAGCAGCA+GGG | 0.593793 | 2_4:-11296038 | None:intergenic |
| AGGTAGTCCTCGTTTACCGA+TGG | 0.597128 | 2_4:+11296713 | Msa0315110:CDS |
| GCAAATGACATAGTGGTGCA+AGG | 0.597159 | 2_4:+11297984 | Msa0315110:CDS |
| GGAGATAGCGAGAAGGACGG+AGG | 0.599301 | 2_4:+11294757 | Msa0315110:CDS |
| AGCAGAAGAGTCTCCAGTCA+CGG | 0.602098 | 2_4:+11296461 | Msa0315110:CDS |
| AGTCCTCGTTTACCGATGGA+TGG | 0.602501 | 2_4:+11296717 | Msa0315110:CDS |
| TGATGATGCGGTGGTCGGAG+GGG | 0.603731 | 2_4:-11294496 | None:intergenic |
| TCCAAAACCTTATATATCTG+CGG | 0.604840 | 2_4:-11294955 | None:intergenic |
| TTCTGAAGGTAAAGGTGATG+TGG | 0.604907 | 2_4:+11296854 | Msa0315110:CDS |
| TGATTTGGCGGCGTTATCGG+AGG | 0.605133 | 2_4:+11294715 | Msa0315110:CDS |
| CTGGTGGTGAAGTGAGGAAG+AGG | 0.605528 | 2_4:+11294621 | Msa0315110:CDS |
| AAGGTTCTCCATTTCCAGCA+AGG | 0.609362 | 2_4:-11296148 | None:intergenic |
| AGGTATCGTATTTAGTGTAG+AGG | 0.610633 | 2_4:-11296571 | None:intergenic |
| CAAATGACATAGTGGTGCAA+GGG | 0.613652 | 2_4:+11297985 | Msa0315110:CDS |
| AACTGGACACATGAATCCAA+CGG | 0.616659 | 2_4:-11298147 | None:intergenic |
| ATTCCCAGATGAATGAAGCA+AGG | 0.616754 | 2_4:-11296937 | None:intergenic |
| ATCGTATTTAGTGTAGAGGA+TGG | 0.619864 | 2_4:-11296567 | None:intergenic |
| TCGGAATCCTTCAATTCCGG+AGG | 0.621454 | 2_4:+11294574 | Msa0315110:CDS |
| AGATTGTTCTGGGGATACCG+AGG | 0.623417 | 2_4:-11297165 | None:intergenic |
| TTCCCAGATGAATGAAGCAA+GGG | 0.624115 | 2_4:-11296936 | None:intergenic |
| TCGACGGTGAGGACGGGAGT+AGG | 0.625711 | 2_4:-11294435 | None:intergenic |
| TTTCCATTGGCATTGCCTGG+TGG | 0.626819 | 2_4:+11294605 | Msa0315110:CDS |
| CAAATCAATGTGTTGGACAG+TGG | 0.627499 | 2_4:+11298191 | Msa0315110:CDS |
| AAGGACGGAGGGGTTAAAGG+AGG | 0.627983 | 2_4:+11294769 | Msa0315110:CDS |
| GGCGGAGATAGCGAGAAGGA+CGG | 0.630693 | 2_4:+11294754 | Msa0315110:CDS |
| CTGGTTGCACTAATACTAAG+GGG | 0.632921 | 2_4:+11296994 | Msa0315110:CDS |
| GTGGGAGTTGGAAGAAGCGG+TGG | 0.634389 | 2_4:-11294470 | None:intergenic |
| TGAATTGGCAAATGACATAG+TGG | 0.638698 | 2_4:+11297977 | Msa0315110:CDS |
| ATACAACATACAGCGAGTCA+AGG | 0.642596 | 2_4:-11298787 | None:intergenic |
| AGAAGAAGCTTCCATCCCAA+AGG | 0.644423 | 2_4:-11294893 | None:intergenic |
| TGCGGTGGGACCCAGCGCTG+TGG | 0.645149 | 2_4:-11294412 | None:intergenic |
| TAGTGGCAACAATCTGTCGT+TGG | 0.652025 | 2_4:-11296074 | None:intergenic |
| ATGTGGCGCTGACTGTTGAG+GGG | 0.652083 | 2_4:+11296871 | Msa0315110:CDS |
| TTGTGATGCAGACTGAGCTG+AGG | 0.653285 | 2_4:-11298018 | None:intergenic |
| GGTGGAGCATCCGTTTGCGG+CGG | 0.658249 | 2_4:+11294736 | Msa0315110:CDS |
| CATTGCCTGGTGGTGAAGTG+AGG | 0.660449 | 2_4:+11294615 | Msa0315110:CDS |
| GTGGTGCGACGCGACATCGA+CGG | 0.662400 | 2_4:-11294451 | None:intergenic |
| ATCAAGTGAAAATATGAACA+AGG | 0.664405 | 2_4:+11298967 | Msa0315110:three_prime_UTR |
| GTTCCATCCATCGGTAAACG+AGG | 0.667007 | 2_4:-11296720 | None:intergenic |
| GATAGCTGCAATGATGTACC+TGG | 0.669520 | 2_4:+11297071 | Msa0315110:CDS |
| AGATAGCGAGAAGGACGGAG+GGG | 0.671249 | 2_4:+11294759 | Msa0315110:CDS |
| GATGCACCTGATACTTCTGA+AGG | 0.671872 | 2_4:+11296840 | Msa0315110:CDS |
| ACAACCACATGTGTATGGTG+TGG | 0.673155 | 2_4:+11298077 | Msa0315110:CDS |
| ACATGAACATTAGAAACACC+AGG | 0.677148 | 2_4:-11297089 | None:intergenic |
| ATTGTTCTGGGGATACCGAG+GGG | 0.684093 | 2_4:-11297163 | None:intergenic |
| GTTAGCGATCTAAATCAGCA+AGG | 0.685979 | 2_4:+11296693 | Msa0315110:CDS |
| TGGTTGCACTAATACTAAGG+GGG | 0.689364 | 2_4:+11296995 | Msa0315110:CDS |
| CATTCTGGGAGTGAACTGCA+AGG | 0.690541 | 2_4:+11296900 | Msa0315110:CDS |
| GCGACGCGACATCGACGGTG+AGG | 0.695548 | 2_4:-11294446 | None:intergenic |
| TTGCGGCGGAGATAGCGAGA+AGG | 0.699580 | 2_4:+11294750 | Msa0315110:CDS |
| TGAGGTAATCGATGATGATG+CGG | 0.701630 | 2_4:-11294508 | None:intergenic |
| AGAATCCAAAGATTGTTCTG+GGG | 0.703845 | 2_4:-11297174 | None:intergenic |
| TATTCCACACCATACACATG+TGG | 0.705154 | 2_4:-11298081 | None:intergenic |
| GGTAATCGATGATGATGCGG+TGG | 0.707704 | 2_4:-11294505 | None:intergenic |
| TTCATCAGAAGACAACGAGG+CGG | 0.748047 | 2_4:+11296262 | Msa0315110:CDS |
| CTATTCATCAGAAGACAACG+AGG | 0.776944 | 2_4:+11296259 | Msa0315110:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAATAAGAAAAACAAAA+AGG | + | chr2_4:11294126-11294145 | Msa0315110:five_prime_UTR | 10.0% |
| !! | GAAAAAATTATTACTTTATT+TGG | + | chr2_4:11297474-11297493 | Msa0315110:intron | 10.0% |
| !! | AATTGATTATTTAATAACAA+TGG | + | chr2_4:11298263-11298282 | Msa0315110:intron | 10.0% |
| !!! | ATTTTATATTCTTCAGTTTT+AGG | + | chr2_4:11294977-11294996 | Msa0315110:intron | 15.0% |
| !! | TTTATACAAAAACACTTATA+TGG | - | chr2_4:11295102-11295121 | None:intergenic | 15.0% |
| !! | TAAAAGCAAATTATCATTAT+TGG | + | chr2_4:11297745-11297764 | Msa0315110:intron | 15.0% |
| !! | TTATTTAATAACAATGGTTT+CGG | + | chr2_4:11298269-11298288 | Msa0315110:intron | 15.0% |
| !! | TTTGTTAATCTTACCTATAT+GGG | + | chr2_4:11294047-11294066 | Msa0315110:intron | 20.0% |
| !!! | TGTTTGTTTTGTTGTTAATT+TGG | + | chr2_4:11295012-11295031 | Msa0315110:intron | 20.0% |
| !! | TAATGTTCTTTGCTTATTAA+TGG | + | chr2_4:11295433-11295452 | Msa0315110:intron | 20.0% |
| !! | AATGTTCTTTGCTTATTAAT+GGG | + | chr2_4:11295434-11295453 | Msa0315110:intron | 20.0% |
| !!! | AGCTATTTCTAAAACAAATT+TGG | + | chr2_4:11295559-11295578 | Msa0315110:intron | 20.0% |
| !!! | GCTATTTCTAAAACAAATTT+GGG | + | chr2_4:11295560-11295579 | Msa0315110:intron | 20.0% |
| !!! | TTTTTGTTTGGAACTAAATT+TGG | + | chr2_4:11295589-11295608 | Msa0315110:intron | 20.0% |
| !!! | TTTTGTTTGGAACTAAATTT+GGG | + | chr2_4:11295590-11295609 | Msa0315110:intron | 20.0% |
| !! | AATTTATCCTAAAGAGTTTA+TGG | + | chr2_4:11295702-11295721 | Msa0315110:intron | 20.0% |
| !!! | TTTTATTTTGTATTGATCCA+TGG | + | chr2_4:11297404-11297423 | Msa0315110:intron | 20.0% |
| !! | ACAAGAAGTTATGTTAAATA+TGG | + | chr2_4:11298037-11298056 | Msa0315110:CDS | 20.0% |
| !!! | TTTTGTTTTCTTGTGTTTTT+TGG | - | chr2_4:11298511-11298530 | None:intergenic | 20.0% |
| !! | AATCGAAAAGAATATGATAT+TGG | - | chr2_4:11298599-11298618 | None:intergenic | 20.0% |
| ! | TATCATTTCTCTTAACAAAG+AGG | - | chr2_4:11293854-11293873 | None:intergenic | 25.0% |
| !!! | AACCATTTTTTGACAACTTT+TGG | + | chr2_4:11293881-11293900 | Msa0315110:intron | 25.0% |
| !! | CTTTTATTGGTCAAAAACAA+TGG | - | chr2_4:11293966-11293985 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTTTCGCTTTTAT+TGG | - | chr2_4:11293979-11293998 | None:intergenic | 25.0% |
| ! | CAATAAAAGCGAAAAAAACA+AGG | + | chr2_4:11293977-11293996 | Msa0315110:intron | 25.0% |
| ! | CATATAGGTAAGATTAACAA+AGG | - | chr2_4:11294048-11294067 | None:intergenic | 25.0% |
| ! | CTTTGTTAATCTTACCTATA+TGG | + | chr2_4:11294046-11294065 | Msa0315110:intron | 25.0% |
| ! | TTTGACACTATTTGAAAGAA+GGG | + | chr2_4:11294077-11294096 | Msa0315110:five_prime_UTR | 25.0% |
| !!! | TTTTTTTCTTACACGAATGA+CGG | - | chr2_4:11294108-11294127 | None:intergenic | 25.0% |
| !! | AATAAGTTGAAGATAGCTTA+TGG | + | chr2_4:11295212-11295231 | Msa0315110:intron | 25.0% |
| ! | ACAAATGACAGCTATATTTA+TGG | - | chr2_4:11295335-11295354 | None:intergenic | 25.0% |
| !! | TGTTATTTGAATCACAGAAT+TGG | + | chr2_4:11295358-11295377 | Msa0315110:intron | 25.0% |
| ! | TATACTGTTTATCCTAACAT+GGG | - | chr2_4:11295491-11295510 | None:intergenic | 25.0% |
| ! | TTATACTGTTTATCCTAACA+TGG | - | chr2_4:11295492-11295511 | None:intergenic | 25.0% |
| !!! | TTTGGGTATTACTTTTTGTT+TGG | + | chr2_4:11295577-11295596 | Msa0315110:intron | 25.0% |
| ! | CTTATTTCCATAAACTCTTT+AGG | - | chr2_4:11295712-11295731 | None:intergenic | 25.0% |
| ! | AATAAGCTGAAAACAACTTA+TGG | + | chr2_4:11295726-11295745 | Msa0315110:intron | 25.0% |
| ! | AGCAAAAACAGATATGTTTA+TGG | - | chr2_4:11295815-11295834 | None:intergenic | 25.0% |
| ! | AATTATAACTCCATCTGAAA+CGG | - | chr2_4:11296304-11296323 | None:intergenic | 25.0% |
| ! | GATGGAGTTATAATTAAAGA+TGG | + | chr2_4:11296309-11296328 | Msa0315110:CDS | 25.0% |
| ! | TTCATGTTAGGAATTATTTG+AGG | + | chr2_4:11296400-11296419 | Msa0315110:CDS | 25.0% |
| ! | TATTATAGAGGATTCTATCA+TGG | + | chr2_4:11296542-11296561 | Msa0315110:CDS | 25.0% |
| ! | AATAAGAGTGACTTGAAAAT+TGG | + | chr2_4:11297044-11297063 | Msa0315110:CDS | 25.0% |
| ! | TTATATGCATTATACCTTGT+CGG | - | chr2_4:11297216-11297235 | None:intergenic | 25.0% |
| ! | TCATATATGTTGCAAAATAG+AGG | + | chr2_4:11297263-11297282 | Msa0315110:intron | 25.0% |
| ! | ACTATGTCTCTAATATATTC+AGG | + | chr2_4:11297381-11297400 | Msa0315110:intron | 25.0% |
| ! | TTCTCTTTGTAAGATATATG+TGG | - | chr2_4:11297457-11297476 | None:intergenic | 25.0% |
| ! | TTGGGGAGATAATAAATTAT+AGG | + | chr2_4:11297509-11297528 | Msa0315110:intron | 25.0% |
| ! | GAGATAATAAATTATAGGTC+TGG | + | chr2_4:11297514-11297533 | Msa0315110:intron | 25.0% |
| ! | AAAAATAATAGCAGCAGATA+AGG | - | chr2_4:11298298-11298317 | None:intergenic | 25.0% |
| ! | ATTGAACTGCAAAAGTTTAA+AGG | - | chr2_4:11298644-11298663 | None:intergenic | 25.0% |
| ! | TCTTTATAAAAATCAGTAGC+AGG | + | chr2_4:11298666-11298685 | Msa0315110:three_prime_UTR | 25.0% |
| ! | ACAATACTACATGATCATAT+CGG | - | chr2_4:11298846-11298865 | None:intergenic | 25.0% |
| ! | ATCAAGTGAAAATATGAACA+AGG | + | chr2_4:11298967-11298986 | Msa0315110:three_prime_UTR | 25.0% |
| ! | GCATATTAATAGTGATCTAT+CGG | + | chr2_4:11299016-11299035 | Msa0315110:three_prime_UTR | 25.0% |
| GTCCAAAAGTTGTCAAAAAA+TGG | - | chr2_4:11293886-11293905 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr2_4:11293953-11293972 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | + | chr2_4:11294003-11294022 | Msa0315110:intron | 30.0% | |
| GTTTGACACTATTTGAAAGA+AGG | + | chr2_4:11294076-11294095 | Msa0315110:five_prime_UTR | 30.0% | |
| AATTTCAACTTCACTGTTTG+CGG | + | chr2_4:11294195-11294214 | Msa0315110:five_prime_UTR | 30.0% | |
| AACATAGAAGAAGATGAAGA+AGG | + | chr2_4:11294229-11294248 | Msa0315110:exon | 30.0% | |
| ! | TCCAAATGAGTTTTCACTTT+CGG | - | chr2_4:11294662-11294681 | None:intergenic | 30.0% |
| GAAGAGATTGTGAACAAAAA+CGG | + | chr2_4:11294683-11294702 | Msa0315110:CDS | 30.0% | |
| ! | ATTGTTGATGCTTCTGATTT+TGG | + | chr2_4:11294860-11294879 | Msa0315110:CDS | 30.0% |
| ! | AGCTTCTTCTTAGTTTGAAA+AGG | + | chr2_4:11294906-11294925 | Msa0315110:CDS | 30.0% |
| ! | CTTAGTTTGAAAAGGAAAGA+TGG | + | chr2_4:11294914-11294933 | Msa0315110:CDS | 30.0% |
| TTTATTGCCGCAGATATATA+AGG | + | chr2_4:11294948-11294967 | Msa0315110:CDS | 30.0% | |
| TCCAAAACCTTATATATCTG+CGG | - | chr2_4:11294958-11294977 | None:intergenic | 30.0% | |
| AAGCTATCATGAAGAGTTTA+TGG | + | chr2_4:11295188-11295207 | Msa0315110:intron | 30.0% | |
| CAACTTATGGACATTTCATA+AGG | + | chr2_4:11295739-11295758 | Msa0315110:intron | 30.0% | |
| TATGCAGTAGTCAATAGATA+AGG | + | chr2_4:11295766-11295785 | Msa0315110:intron | 30.0% | |
| GATATGTTTATGGCATGTTT+GGG | - | chr2_4:11295805-11295824 | None:intergenic | 30.0% | |
| AGATATGTTTATGGCATGTT+TGG | - | chr2_4:11295806-11295825 | None:intergenic | 30.0% | |
| !!! | CTGTTTTTGCTTGTTTGTTT+TGG | + | chr2_4:11295824-11295843 | Msa0315110:intron | 30.0% |
| AAAACACTTTATGACAGAAC+TGG | - | chr2_4:11296347-11296366 | None:intergenic | 30.0% | |
| !! | GTTCTGTCATAAAGTGTTTT+TGG | + | chr2_4:11296347-11296366 | Msa0315110:CDS | 30.0% |
| TGCTCAAAACTCTATTATAG+AGG | + | chr2_4:11296530-11296549 | Msa0315110:CDS | 30.0% | |
| !!! | GTTAGTTTTCTAGATAACAC+TGG | + | chr2_4:11296789-11296808 | Msa0315110:CDS | 30.0% |
| !! | ACCACATTTTCTTTAGAAGT+TGG | - | chr2_4:11297125-11297144 | None:intergenic | 30.0% |
| AAGAATCCAAAGATTGTTCT+GGG | - | chr2_4:11297178-11297197 | None:intergenic | 30.0% | |
| AAAGAATCCAAAGATTGTTC+TGG | - | chr2_4:11297179-11297198 | None:intergenic | 30.0% | |
| TAACTTATCCTTGCCATTAT+TGG | + | chr2_4:11297233-11297252 | Msa0315110:intron | 30.0% | |
| TATGTGGAAAACATTCAAGA+GGG | - | chr2_4:11297441-11297460 | None:intergenic | 30.0% | |
| ATATGTGGAAAACATTCAAG+AGG | - | chr2_4:11297442-11297461 | None:intergenic | 30.0% | |
| ATCTCGGCATCAATAAAAAA+TGG | - | chr2_4:11297540-11297559 | None:intergenic | 30.0% | |
| ! | TATGATTTTGCAAGTGTTCA+AGG | + | chr2_4:11297936-11297955 | Msa0315110:CDS | 30.0% |
| TTTCAGAATTAACAGCATCA+TGG | - | chr2_4:11298115-11298134 | None:intergenic | 30.0% | |
| CACAAGAAAACAAAACAAGA+TGG | + | chr2_4:11298516-11298535 | Msa0315110:intron | 30.0% | |
| AAACTTCGATATATCTATGC+AGG | - | chr2_4:11298750-11298769 | None:intergenic | 30.0% | |
| TTACGAATAAACAGGATTGT+GGG | - | chr2_4:11298818-11298837 | None:intergenic | 30.0% | |
| TGTTGTAATTGTCTTAGTCT+TGG | + | chr2_4:11298885-11298904 | Msa0315110:three_prime_UTR | 30.0% | |
| GAAGAAGGAAGAAGAATCAA+CGG | + | chr2_4:11294244-11294263 | Msa0315110:CDS | 35.0% | |
| !!! | AAGGTTGATGGATCGATTTT+AGG | - | chr2_4:11294389-11294408 | None:intergenic | 35.0% |
| ACCGAAAGTGAAAACTCATT+TGG | + | chr2_4:11294658-11294677 | Msa0315110:CDS | 35.0% | |
| GAAAGTGAAAACTCATTTGG+AGG | + | chr2_4:11294661-11294680 | Msa0315110:CDS | 35.0% | |
| !! | AAACGGTGTTGTGATTGATT+TGG | + | chr2_4:11294700-11294719 | Msa0315110:CDS | 35.0% |
| !!! | GTTAGGGTTTTTGAGTGATT+TGG | + | chr2_4:11294802-11294821 | Msa0315110:CDS | 35.0% |
| !!! | GGTTTTTGAGTGATTTGGTT+GGG | + | chr2_4:11294807-11294826 | Msa0315110:CDS | 35.0% |
| ATGACATTAATGTGCTTTGC+TGG | + | chr2_4:11295036-11295055 | Msa0315110:intron | 35.0% | |
| AGACTATTTGAGAGAGCTTA+TGG | - | chr2_4:11295256-11295275 | None:intergenic | 35.0% | |
| TATGCAGTAGTCAATAGGTA+AGG | + | chr2_4:11295286-11295305 | Msa0315110:intron | 35.0% | |
| AAATTTGCGAGGGACTAAAA+TGG | + | chr2_4:11295619-11295638 | Msa0315110:intron | 35.0% | |
| AATTTGCGAGGGACTAAAAT+GGG | + | chr2_4:11295620-11295639 | Msa0315110:intron | 35.0% | |
| TTGATATTCTCCAGTCCTAA+TGG | + | chr2_4:11295877-11295896 | Msa0315110:intron | 35.0% | |
| CACAGTTACAAATCACTCAA+AGG | + | chr2_4:11295965-11295984 | Msa0315110:CDS | 35.0% | |
| AAGGAGTGAAAATGTACTTC+CGG | + | chr2_4:11295984-11296003 | Msa0315110:CDS | 35.0% | |
| CTTGAATCGTTCATTAGAGA+CGG | - | chr2_4:11296121-11296140 | None:intergenic | 35.0% | |
| ATATGCATCCTTCTCATCAA+AGG | - | chr2_4:11296223-11296242 | None:intergenic | 35.0% | |
| TCTTCTGATGAATAGACAAC+AGG | - | chr2_4:11296254-11296273 | None:intergenic | 35.0% | |
| !! | GTTTTGAGCAATTTCGATGA+GGG | - | chr2_4:11296520-11296539 | None:intergenic | 35.0% |
| !!! | AGTTTTGAGCAATTTCGATG+AGG | - | chr2_4:11296521-11296540 | None:intergenic | 35.0% |
| ATCGTATTTAGTGTAGAGGA+TGG | - | chr2_4:11296570-11296589 | None:intergenic | 35.0% | |
| ! | AGGTATCGTATTTAGTGTAG+AGG | - | chr2_4:11296574-11296593 | None:intergenic | 35.0% |
| GATACCTGTTTCAGAAATTG+CGG | + | chr2_4:11296587-11296606 | Msa0315110:CDS | 35.0% | |
| ATAAATGCTGAGTCTCCATT+CGG | + | chr2_4:11296630-11296649 | Msa0315110:CDS | 35.0% | |
| AAAATGGAAAAGAGCTTGAC+TGG | + | chr2_4:11296660-11296679 | Msa0315110:CDS | 35.0% | |
| TCCAAGAAGAGTGAAAATTC+TGG | + | chr2_4:11296975-11296994 | Msa0315110:CDS | 35.0% | |
| ! | ACCAGAATTTTCACTCTTCT+TGG | - | chr2_4:11296979-11296998 | None:intergenic | 35.0% |
| ! | TTCTGGTTGCACTAATACTA+AGG | + | chr2_4:11296992-11297011 | Msa0315110:CDS | 35.0% |
| TCTGGTTGCACTAATACTAA+GGG | + | chr2_4:11296993-11297012 | Msa0315110:CDS | 35.0% | |
| ACATGAACATTAGAAACACC+AGG | - | chr2_4:11297092-11297111 | None:intergenic | 35.0% | |
| ! | GCCAACTTCTAAAGAAAATG+TGG | + | chr2_4:11297121-11297140 | Msa0315110:CDS | 35.0% |
| AGAAAATGTGGTCCAATCTA+AGG | + | chr2_4:11297133-11297152 | Msa0315110:CDS | 35.0% | |
| AGAATCCAAAGATTGTTCTG+GGG | - | chr2_4:11297177-11297196 | None:intergenic | 35.0% | |
| ATATGAAACCCTGCCAATAA+TGG | - | chr2_4:11297249-11297268 | None:intergenic | 35.0% | |
| TTCCTACAAGTATCATAGCA+GGG | + | chr2_4:11297291-11297310 | Msa0315110:intron | 35.0% | |
| !! | TATTTGGGCATGCTTGTTTT+TGG | + | chr2_4:11297490-11297509 | Msa0315110:intron | 35.0% |
| !! | ATTTGGGCATGCTTGTTTTT+GGG | + | chr2_4:11297491-11297510 | Msa0315110:intron | 35.0% |
| CATGCAAGCATTCTTAATCT+CGG | - | chr2_4:11297556-11297575 | None:intergenic | 35.0% | |
| AAGAGTAGGAGAGATGTATA+AGG | - | chr2_4:11297599-11297618 | None:intergenic | 35.0% | |
| ATCTCTCCTACTCTTAGATT+AGG | + | chr2_4:11297604-11297623 | Msa0315110:intron | 35.0% | |
| AACACACCTAATCTAAGAGT+AGG | - | chr2_4:11297613-11297632 | None:intergenic | 35.0% | |
| TACTCTTAGATTAGGTGTGT+TGG | + | chr2_4:11297612-11297631 | Msa0315110:intron | 35.0% | |
| ATTAGGTGTGTTGGAGATTT+GGG | + | chr2_4:11297621-11297640 | Msa0315110:intron | 35.0% | |
| TTGTGTACTTTCAACGAACA+TGG | + | chr2_4:11297675-11297694 | Msa0315110:intron | 35.0% | |
| ATTATTGGAATCTAGCGTCA+TGG | + | chr2_4:11297760-11297779 | Msa0315110:intron | 35.0% | |
| !! | TCTTGTTATTCCTCATTGAC+AGG | + | chr2_4:11297872-11297891 | Msa0315110:intron | 35.0% |
| !! | CTTGTTATTCCTCATTGACA+GGG | + | chr2_4:11297873-11297892 | Msa0315110:intron | 35.0% |
| ! | TTGTTATTCCTCATTGACAG+GGG | + | chr2_4:11297874-11297893 | Msa0315110:intron | 35.0% |
| TATCTTCTAACCTCAATTCC+TGG | - | chr2_4:11297902-11297921 | None:intergenic | 35.0% | |
| TCTTGATGTGTCAACTGAAT+TGG | + | chr2_4:11297962-11297981 | Msa0315110:CDS | 35.0% | |
| TGAATTGGCAAATGACATAG+TGG | + | chr2_4:11297977-11297996 | Msa0315110:CDS | 35.0% | |
| GAAATACAATCAGATTCCGT+TGG | + | chr2_4:11298131-11298150 | Msa0315110:CDS | 35.0% | |
| AACGATTACCAGTCTAAAGA+TGG | - | chr2_4:11298232-11298251 | None:intergenic | 35.0% | |
| GACTACGATCTATGTCAATT+AGG | - | chr2_4:11298325-11298344 | None:intergenic | 35.0% | |
| ! | AGAAGAGAAAATCCAGCTTT+TGG | + | chr2_4:11298698-11298717 | Msa0315110:three_prime_UTR | 35.0% |
| ! | GTTGATAGAGTGCTCAATTA+TGG | + | chr2_4:11298722-11298741 | Msa0315110:three_prime_UTR | 35.0% |
| CTTACGAATAAACAGGATTG+TGG | - | chr2_4:11298819-11298838 | None:intergenic | 35.0% | |
| ! | CGGTTTTCTTACGAATAAAC+AGG | - | chr2_4:11298826-11298845 | None:intergenic | 35.0% |
| !! | TGTAATTGTCTTAGTCTTGG+AGG | + | chr2_4:11298888-11298907 | Msa0315110:three_prime_UTR | 35.0% |
| CATTACACACTAGTTGTGTA+TGG | - | chr2_4:11298929-11298948 | None:intergenic | 35.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr2_4:11293943-11293962 | None:intergenic | 40.0% | |
| GTCAAACACAAGTCCCATAT+AGG | - | chr2_4:11294063-11294082 | None:intergenic | 40.0% | |
| AGAAGAATCAACGGTTCAGA+TGG | + | chr2_4:11294253-11294272 | Msa0315110:CDS | 40.0% | |
| AATCAACGGTTCAGATGGAA+TGG | + | chr2_4:11294258-11294277 | Msa0315110:CDS | 40.0% | |
| CGATTTCGCGTGTAGATTTA+AGG | - | chr2_4:11294361-11294380 | None:intergenic | 40.0% | |
| ! | TGAGGTAATCGATGATGATG+CGG | - | chr2_4:11294511-11294530 | None:intergenic | 40.0% |
| CTTCTCTGATGAACTGTTTG+AGG | - | chr2_4:11294529-11294548 | None:intergenic | 40.0% | |
| AATGGAAATTCCTTCACCTC+CGG | - | chr2_4:11294593-11294612 | None:intergenic | 40.0% | |
| !!! | GGGTTTTTGAGTGATTTGGT+TGG | + | chr2_4:11294806-11294825 | Msa0315110:CDS | 40.0% |
| !!! | TTTTGGTGATGTGTTGCCTT+TGG | + | chr2_4:11294877-11294896 | Msa0315110:CDS | 40.0% |
| !! | TTTGGTGATGTGTTGCCTTT+GGG | + | chr2_4:11294878-11294897 | Msa0315110:CDS | 40.0% |
| ! | GCCGCAGATATATAAGGTTT+TGG | + | chr2_4:11294954-11294973 | Msa0315110:intron | 40.0% |
| AGCTCTCTCAAATAGTCTCA+TGG | + | chr2_4:11295258-11295277 | Msa0315110:intron | 40.0% | |
| GCTCTCTCAAATAGTCTCAT+GGG | + | chr2_4:11295259-11295278 | Msa0315110:intron | 40.0% | |
| GTGCTTATGCAGTAGTCAAT+AGG | + | chr2_4:11295281-11295300 | Msa0315110:intron | 40.0% | |
| ! | TCTTTGCTTATTAATGGGCC+AGG | + | chr2_4:11295439-11295458 | Msa0315110:intron | 40.0% |
| CTAAAATGGGTCTTCACTCA+AGG | + | chr2_4:11295633-11295652 | Msa0315110:intron | 40.0% | |
| ! | TCGTATCTGCAGTCTCTTTT+TGG | + | chr2_4:11295931-11295950 | Msa0315110:CDS | 40.0% |
| ! | ACCAGACACATTTGAGTTAG+TGG | - | chr2_4:11296094-11296113 | None:intergenic | 40.0% |
| CGTCTCTAATGAACGATTCA+AGG | + | chr2_4:11296119-11296138 | Msa0315110:CDS | 40.0% | |
| ATTCAAGGAAATTGCCTTGC+TGG | + | chr2_4:11296134-11296153 | Msa0315110:CDS | 40.0% | |
| CTATTCATCAGAAGACAACG+AGG | + | chr2_4:11296259-11296278 | Msa0315110:CDS | 40.0% | |
| GTCGCTACAATAGTCATGTT+GGG | + | chr2_4:11296376-11296395 | Msa0315110:CDS | 40.0% | |
| GTCATGTTGGGATTCATGTT+AGG | + | chr2_4:11296388-11296407 | Msa0315110:CDS | 40.0% | |
| ! | TCCATTCGGTGAACAGAAAA+TGG | + | chr2_4:11296644-11296663 | Msa0315110:CDS | 40.0% |
| ! | TCCATTTTCTGTTCACCGAA+TGG | - | chr2_4:11296648-11296667 | None:intergenic | 40.0% |
| GTTAGCGATCTAAATCAGCA+AGG | + | chr2_4:11296693-11296712 | Msa0315110:CDS | 40.0% | |
| TCCTCTATTGTTCCATCCAT+CGG | - | chr2_4:11296732-11296751 | None:intergenic | 40.0% | |
| CCATCTTTGCATCAACTACT+CGG | - | chr2_4:11296770-11296789 | None:intergenic | 40.0% | |
| !! | CCTTTACCTTCAGAAGTATC+AGG | - | chr2_4:11296849-11296868 | None:intergenic | 40.0% |
| ! | CCTGATACTTCTGAAGGTAA+AGG | + | chr2_4:11296846-11296865 | Msa0315110:CDS | 40.0% |
| ! | TTCTGAAGGTAAAGGTGATG+TGG | + | chr2_4:11296854-11296873 | Msa0315110:CDS | 40.0% |
| TTGAGGGGTTTGATCATTCT+GGG | + | chr2_4:11296886-11296905 | Msa0315110:CDS | 40.0% | |
| TTCCCAGATGAATGAAGCAA+GGG | - | chr2_4:11296939-11296958 | None:intergenic | 40.0% | |
| ATTCCCAGATGAATGAAGCA+AGG | - | chr2_4:11296940-11296959 | None:intergenic | 40.0% | |
| ! | TTTTCACTCTTCTTGGATCC+AGG | - | chr2_4:11296972-11296991 | None:intergenic | 40.0% |
| CTGGTTGCACTAATACTAAG+GGG | + | chr2_4:11296994-11297013 | Msa0315110:CDS | 40.0% | |
| TGGTTGCACTAATACTAAGG+GGG | + | chr2_4:11296995-11297014 | Msa0315110:CDS | 40.0% | |
| AGGGGTTAGAAACCTTAGAT+TGG | - | chr2_4:11297148-11297167 | None:intergenic | 40.0% | |
| ! | ATCTAAGGTTTCTAACCCCT+CGG | + | chr2_4:11297148-11297167 | Msa0315110:CDS | 40.0% |
| TTATCCTTGCCATTATTGGC+AGG | + | chr2_4:11297237-11297256 | Msa0315110:intron | 40.0% | |
| TATCCTTGCCATTATTGGCA+GGG | + | chr2_4:11297238-11297257 | Msa0315110:intron | 40.0% | |
| GTTCCTACAAGTATCATAGC+AGG | + | chr2_4:11297290-11297309 | Msa0315110:intron | 40.0% | |
| GACCACAAGACATGCATAAA+GGG | - | chr2_4:11297344-11297363 | None:intergenic | 40.0% | |
| AGACCACAAGACATGCATAA+AGG | - | chr2_4:11297345-11297364 | None:intergenic | 40.0% | |
| !!! | TTTGGGCATGCTTGTTTTTG+GGG | + | chr2_4:11297492-11297511 | Msa0315110:intron | 40.0% |
| CGAGATTAAGAATGCTTGCA+TGG | + | chr2_4:11297554-11297573 | Msa0315110:intron | 40.0% | |
| GATTAGGTGTGTTGGAGATT+TGG | + | chr2_4:11297620-11297639 | Msa0315110:intron | 40.0% | |
| CAATCAGTTAAGTGCAGAGT+GGG | - | chr2_4:11297824-11297843 | None:intergenic | 40.0% | |
| CAAATGACATAGTGGTGCAA+GGG | + | chr2_4:11297985-11298004 | Msa0315110:CDS | 40.0% | |
| TATTCCACACCATACACATG+TGG | - | chr2_4:11298084-11298103 | None:intergenic | 40.0% | |
| AACTGGACACATGAATCCAA+CGG | - | chr2_4:11298150-11298169 | None:intergenic | 40.0% | |
| ATTCATGTGTCCAGTTTGCA+AGG | + | chr2_4:11298154-11298173 | Msa0315110:CDS | 40.0% | |
| ! | GAGATTTTTGCCTTGCAAAC+TGG | - | chr2_4:11298167-11298186 | None:intergenic | 40.0% |
| GTTTGCAAGGCAAAAATCTC+TGG | + | chr2_4:11298167-11298186 | Msa0315110:CDS | 40.0% | |
| CTCTGGTCAAATCAATGTGT+TGG | + | chr2_4:11298184-11298203 | Msa0315110:CDS | 40.0% | |
| CAAATCAATGTGTTGGACAG+TGG | + | chr2_4:11298191-11298210 | Msa0315110:CDS | 40.0% | |
| CGATGCACTCAGTTTATCAA+AGG | - | chr2_4:11298425-11298444 | None:intergenic | 40.0% | |
| TTGATAAACTGAGTGCATCG+TGG | + | chr2_4:11298425-11298444 | Msa0315110:intron | 40.0% | |
| ACTCTATCAACTCCAAAAGC+TGG | - | chr2_4:11298713-11298732 | None:intergenic | 40.0% | |
| ATACAACATACAGCGAGTCA+AGG | - | chr2_4:11298790-11298809 | None:intergenic | 40.0% | |
| GTGTATGGAGTTCCATTGAA+CGG | - | chr2_4:11298914-11298933 | None:intergenic | 40.0% | |
| ! | GCGTGTAGATTTAAGGTCGA+AGG | - | chr2_4:11294354-11294373 | None:intergenic | 45.0% |
| ! | AGCTCAACAGTGTCGAACTT+CGG | - | chr2_4:11294554-11294573 | None:intergenic | 45.0% |
| AGTTCGACACTGTTGAGCTT+CGG | + | chr2_4:11294555-11294574 | Msa0315110:CDS | 45.0% | |
| GCTTCGGAATCCTTCAATTC+CGG | + | chr2_4:11294571-11294590 | Msa0315110:CDS | 45.0% | |
| GGAGGTGAAGGAATTTCCAT+TGG | + | chr2_4:11294592-11294611 | Msa0315110:CDS | 45.0% | |
| GAATTTCCATTGGCATTGCC+TGG | + | chr2_4:11294602-11294621 | Msa0315110:CDS | 45.0% | |
| AAGTGAGGAAGAGGAAGAGA+GGG | + | chr2_4:11294630-11294649 | Msa0315110:CDS | 45.0% | |
| !! | CGGTGTTGTGATTGATTTGG+CGG | + | chr2_4:11294703-11294722 | Msa0315110:CDS | 45.0% |
| !! | GATTGATTTGGCGGCGTTAT+CGG | + | chr2_4:11294712-11294731 | Msa0315110:CDS | 45.0% |
| AAGGAGGAAGAGGAGTTGTT+AGG | + | chr2_4:11294785-11294804 | Msa0315110:CDS | 45.0% | |
| AGGAGGAAGAGGAGTTGTTA+GGG | + | chr2_4:11294786-11294805 | Msa0315110:CDS | 45.0% | |
| AGAAGAAGCTTCCATCCCAA+AGG | - | chr2_4:11294896-11294915 | None:intergenic | 45.0% | |
| AAAGGAAAGATGGTCGTGCT+TGG | + | chr2_4:11294924-11294943 | Msa0315110:CDS | 45.0% | |
| ! | TTATTAATGGGCCAGGAGTG+AGG | + | chr2_4:11295446-11295465 | Msa0315110:intron | 45.0% |
| AAAGGAAAACTCCTCACTCC+TGG | - | chr2_4:11295460-11295479 | None:intergenic | 45.0% | |
| CTAACATGGGCTCACATCAA+AGG | - | chr2_4:11295478-11295497 | None:intergenic | 45.0% | |
| CTTTGATGTGAGCCCATGTT+AGG | + | chr2_4:11295476-11295495 | Msa0315110:intron | 45.0% | |
| TTGGGCACAAGAAATTTGCG+AGG | + | chr2_4:11295608-11295627 | Msa0315110:intron | 45.0% | |
| TGGGCACAAGAAATTTGCGA+GGG | + | chr2_4:11295609-11295628 | Msa0315110:intron | 45.0% | |
| AAACTGCTGTCCATTAGGAC+TGG | - | chr2_4:11295890-11295909 | None:intergenic | 45.0% | |
| GACAGAAACTGCTGTCCATT+AGG | - | chr2_4:11295895-11295914 | None:intergenic | 45.0% | |
| TCAGTAGTCACTCTCTGTTC+CGG | - | chr2_4:11296006-11296025 | None:intergenic | 45.0% | |
| TAGTGGCAACAATCTGTCGT+TGG | - | chr2_4:11296077-11296096 | None:intergenic | 45.0% | |
| GCCACTAACTCAAATGTGTC+TGG | + | chr2_4:11296090-11296109 | Msa0315110:CDS | 45.0% | |
| GGAAATTGCCTTGCTGGAAA+TGG | + | chr2_4:11296140-11296159 | Msa0315110:CDS | 45.0% | |
| AAGGTTCTCCATTTCCAGCA+AGG | - | chr2_4:11296151-11296170 | None:intergenic | 45.0% | |
| CGTGTATTTGCACATCTGCA+AGG | - | chr2_4:11296170-11296189 | None:intergenic | 45.0% | |
| CAGCTTGACCTTTGATGAGA+AGG | + | chr2_4:11296212-11296231 | Msa0315110:CDS | 45.0% | |
| TTCATCAGAAGACAACGAGG+CGG | + | chr2_4:11296262-11296281 | Msa0315110:CDS | 45.0% | |
| CTTGGTTCATCCGTTTCAGA+TGG | + | chr2_4:11296291-11296310 | Msa0315110:CDS | 45.0% | |
| CGTCGCTACAATAGTCATGT+TGG | + | chr2_4:11296375-11296394 | Msa0315110:CDS | 45.0% | |
| ACCTTCAAGGATCACGAAGA+TGG | + | chr2_4:11296491-11296510 | Msa0315110:CDS | 45.0% | |
| TCCATCTTCGTGATCCTTGA+AGG | - | chr2_4:11296495-11296514 | None:intergenic | 45.0% | |
| !! | CCAACCGCAATTTCTGAAAC+AGG | - | chr2_4:11296594-11296613 | None:intergenic | 45.0% |
| CCTGTTTCAGAAATTGCGGT+TGG | + | chr2_4:11296591-11296610 | Msa0315110:CDS | 45.0% | |
| ACCGATGGATGGAACAATAG+AGG | + | chr2_4:11296728-11296747 | Msa0315110:CDS | 45.0% | |
| ! | CCGAGTAGTTGATGCAAAGA+TGG | + | chr2_4:11296767-11296786 | Msa0315110:CDS | 45.0% |
| GATGCACCTGATACTTCTGA+AGG | + | chr2_4:11296840-11296859 | Msa0315110:CDS | 45.0% | |
| GTTGAGGGGTTTGATCATTC+TGG | + | chr2_4:11296885-11296904 | Msa0315110:CDS | 45.0% | |
| AGTCCCTTGCTTCATTCATC+TGG | + | chr2_4:11296933-11296952 | Msa0315110:CDS | 45.0% | |
| GTCCCTTGCTTCATTCATCT+GGG | + | chr2_4:11296934-11296953 | Msa0315110:CDS | 45.0% | |
| TCTGGGAATCACATGAAACC+TGG | + | chr2_4:11296951-11296970 | Msa0315110:CDS | 45.0% | |
| GATAGCTGCAATGATGTACC+TGG | + | chr2_4:11297071-11297090 | Msa0315110:CDS | 45.0% | |
| GGTATCCCCAGAACAATCTT+TGG | + | chr2_4:11297169-11297188 | Msa0315110:CDS | 45.0% | |
| AAACCCTGCCAATAATGGCA+AGG | - | chr2_4:11297244-11297263 | None:intergenic | 45.0% | |
| GACCCTGCTATGATACTTGT+AGG | - | chr2_4:11297296-11297315 | None:intergenic | 45.0% | |
| AGCAGGGTCTTCTTAAAACG+TGG | + | chr2_4:11297307-11297326 | Msa0315110:intron | 45.0% | |
| AGCCCTTTATGCATGTCTTG+TGG | + | chr2_4:11297339-11297358 | Msa0315110:intron | 45.0% | |
| ! | GTTGAAAGTACACAAGCACG+TGG | - | chr2_4:11297670-11297689 | None:intergenic | 45.0% |
| CCAATCAGTTAAGTGCAGAG+TGG | - | chr2_4:11297825-11297844 | None:intergenic | 45.0% | |
| CCACTCTGCACTTAACTGAT+TGG | + | chr2_4:11297822-11297841 | Msa0315110:intron | 45.0% | |
| GCAAATGACATAGTGGTGCA+AGG | + | chr2_4:11297984-11298003 | Msa0315110:CDS | 45.0% | |
| AGCTCACAACCACATGTGTA+TGG | + | chr2_4:11298072-11298091 | Msa0315110:CDS | 45.0% | |
| ACAACCACATGTGTATGGTG+TGG | + | chr2_4:11298077-11298096 | Msa0315110:CDS | 45.0% | |
| GTCTAAAGATGGCCAGCATT+TGG | - | chr2_4:11298221-11298240 | None:intergenic | 45.0% | |
| AATGCTGGCCATCTTTAGAC+TGG | + | chr2_4:11298221-11298240 | Msa0315110:exon | 45.0% | |
| ATACGCACCAGTGTCTGAAT+TGG | + | chr2_4:11298396-11298415 | Msa0315110:intron | 45.0% | |
| !!! | AAAAAATTATTACTTTATTT+GGG | + | chr2_4:11297475-11297494 | Msa0315110:intron | 5.0% |
| AGAGTGGGAGTTGGAAGAAG+CGG | - | chr2_4:11294476-11294495 | None:intergenic | 50.0% | |
| ! | ATCGATGATGATGCGGTGGT+CGG | - | chr2_4:11294504-11294523 | None:intergenic | 50.0% |
| ! | GGTAATCGATGATGATGCGG+TGG | - | chr2_4:11294508-11294527 | None:intergenic | 50.0% |
| TCGGAATCCTTCAATTCCGG+AGG | + | chr2_4:11294574-11294593 | Msa0315110:CDS | 50.0% | |
| TCCTTCAATTCCGGAGGTGA+AGG | + | chr2_4:11294580-11294599 | Msa0315110:CDS | 50.0% | |
| TCCTTCACCTCCGGAATTGA+AGG | - | chr2_4:11294584-11294603 | None:intergenic | 50.0% | |
| TTTCCATTGGCATTGCCTGG+TGG | + | chr2_4:11294605-11294624 | Msa0315110:CDS | 50.0% | |
| GAAGTGAGGAAGAGGAAGAG+AGG | + | chr2_4:11294629-11294648 | Msa0315110:CDS | 50.0% | |
| !! | TGAGTGATTTGGTTGGGCAG+TGG | + | chr2_4:11294813-11294832 | Msa0315110:CDS | 50.0% |
| !! | GAGTGATTTGGTTGGGCAGT+GGG | + | chr2_4:11294814-11294833 | Msa0315110:CDS | 50.0% |
| !! | AGTGATTTGGTTGGGCAGTG+GGG | + | chr2_4:11294815-11294834 | Msa0315110:CDS | 50.0% |
| ! | GTGATGTGTTGCCTTTGGGA+TGG | + | chr2_4:11294882-11294901 | Msa0315110:CDS | 50.0% |
| GAGGAGAGCTGAAGATTTGC+CGG | + | chr2_4:11296419-11296438 | Msa0315110:CDS | 50.0% | |
| AGGAGAGCTGAAGATTTGCC+GGG | + | chr2_4:11296420-11296439 | Msa0315110:CDS | 50.0% | |
| TCTTCTGCTCCCAGGACATT+AGG | - | chr2_4:11296450-11296469 | None:intergenic | 50.0% | |
| AGCAGAAGAGTCTCCAGTCA+CGG | + | chr2_4:11296461-11296480 | Msa0315110:CDS | 50.0% | |
| TCACGGATGAGACACCTTCA+AGG | + | chr2_4:11296478-11296497 | Msa0315110:CDS | 50.0% | |
| AGGTAGTCCTCGTTTACCGA+TGG | + | chr2_4:11296713-11296732 | Msa0315110:CDS | 50.0% | |
| AGTCCTCGTTTACCGATGGA+TGG | + | chr2_4:11296717-11296736 | Msa0315110:CDS | 50.0% | |
| GTTCCATCCATCGGTAAACG+AGG | - | chr2_4:11296723-11296742 | None:intergenic | 50.0% | |
| ! | CATTCTGGGAGTGAACTGCA+AGG | + | chr2_4:11296900-11296919 | Msa0315110:CDS | 50.0% |
| !! | ATTGTTCTGGGGATACCGAG+GGG | - | chr2_4:11297166-11297185 | None:intergenic | 50.0% |
| !! | GATTGTTCTGGGGATACCGA+GGG | - | chr2_4:11297167-11297186 | None:intergenic | 50.0% |
| !! | AGATTGTTCTGGGGATACCG+AGG | - | chr2_4:11297168-11297187 | None:intergenic | 50.0% |
| TTCTGCATTCAGCTCCGACA+AGG | + | chr2_4:11297199-11297218 | Msa0315110:CDS | 50.0% | |
| !! | AGAGGGAGCACTTCAATCCA+TGG | - | chr2_4:11297424-11297443 | None:intergenic | 50.0% |
| AGGTGTGTTGGAGATTTGGG+TGG | + | chr2_4:11297624-11297643 | Msa0315110:intron | 50.0% | |
| TGGCGCTAGTTGCTAGGTTA+TGG | + | chr2_4:11297644-11297663 | Msa0315110:intron | 50.0% | |
| CAGTTAAGTGCAGAGTGGGT+GGG | - | chr2_4:11297820-11297839 | None:intergenic | 50.0% | |
| TCAGTTAAGTGCAGAGTGGG+TGG | - | chr2_4:11297821-11297840 | None:intergenic | 50.0% | |
| TTGTGATGCAGACTGAGCTG+AGG | - | chr2_4:11298021-11298040 | None:intergenic | 50.0% | |
| GACAGTGGATCACCAAATGC+TGG | + | chr2_4:11298206-11298225 | Msa0315110:CDS | 50.0% | |
| AAGGTCGCCAATTCAGACAC+TGG | - | chr2_4:11298406-11298425 | None:intergenic | 50.0% | |
| CGTGGCGTGGGTCATATTAT+TGG | + | chr2_4:11298443-11298462 | Msa0315110:intron | 50.0% | |
| ! | TAGTCTTGGAGGCCGTTCAA+TGG | + | chr2_4:11298899-11298918 | Msa0315110:three_prime_UTR | 50.0% |
| GCGCTGTGGTTGAAGGTTGA+TGG | - | chr2_4:11294401-11294420 | None:intergenic | 55.0% | |
| TCAACCTTCAACCACAGCGC+TGG | + | chr2_4:11294401-11294420 | Msa0315110:CDS | 55.0% | |
| CAACCTTCAACCACAGCGCT+GGG | + | chr2_4:11294402-11294421 | Msa0315110:CDS | 55.0% | |
| ! | ATGATGATGCGGTGGTCGGA+GGG | - | chr2_4:11294500-11294519 | None:intergenic | 55.0% |
| TCACCACCAGGCAATGCCAA+TGG | - | chr2_4:11294611-11294630 | None:intergenic | 55.0% | |
| ! | CATTGCCTGGTGGTGAAGTG+AGG | + | chr2_4:11294615-11294634 | Msa0315110:CDS | 55.0% |
| CTCTTCCTCACTTCACCACC+AGG | - | chr2_4:11294623-11294642 | None:intergenic | 55.0% | |
| ! | CTGGTGGTGAAGTGAGGAAG+AGG | + | chr2_4:11294621-11294640 | Msa0315110:CDS | 55.0% |
| TGAGGAAGAGGAAGAGAGGG+AGG | + | chr2_4:11294633-11294652 | Msa0315110:CDS | 55.0% | |
| ! | TGATTTGGCGGCGTTATCGG+AGG | + | chr2_4:11294715-11294734 | Msa0315110:CDS | 55.0% |
| GAGATAGCGAGAAGGACGGA+GGG | + | chr2_4:11294758-11294777 | Msa0315110:CDS | 55.0% | |
| AGATAGCGAGAAGGACGGAG+GGG | + | chr2_4:11294759-11294778 | Msa0315110:CDS | 55.0% | |
| GAGAAGGACGGAGGGGTTAA+AGG | + | chr2_4:11294766-11294785 | Msa0315110:CDS | 55.0% | |
| AAGGACGGAGGGGTTAAAGG+AGG | + | chr2_4:11294769-11294788 | Msa0315110:CDS | 55.0% | |
| GGAGGGGTTAAAGGAGGAAG+AGG | + | chr2_4:11294775-11294794 | Msa0315110:CDS | 55.0% | |
| GAAGTAGGAGGAGGAAGAGG+AGG | + | chr2_4:11294837-11294856 | Msa0315110:CDS | 55.0% | |
| !! | ACAACGAGGCGGTATCGACT+TGG | + | chr2_4:11296273-11296292 | Msa0315110:CDS | 55.0% |
| !! | GAAGGTGTCTCATCCGTGAC+TGG | - | chr2_4:11296477-11296496 | None:intergenic | 55.0% |
| !! | TGATGTGGCGCTGACTGTTG+AGG | + | chr2_4:11296869-11296888 | Msa0315110:CDS | 55.0% |
| !! | GATGTGGCGCTGACTGTTGA+GGG | + | chr2_4:11296870-11296889 | Msa0315110:CDS | 55.0% |
| !! | ATGTGGCGCTGACTGTTGAG+GGG | + | chr2_4:11296871-11296890 | Msa0315110:CDS | 55.0% |
| TTTGGGTGGCGCTAGTTGCT+AGG | + | chr2_4:11297638-11297657 | Msa0315110:intron | 55.0% | |
| TCCTCATTGACAGGGGTTCC+AGG | + | chr2_4:11297881-11297900 | Msa0315110:intron | 55.0% | |
| TCCTGGAACCCCTGTCAATG+AGG | - | chr2_4:11297885-11297904 | None:intergenic | 55.0% | |
| GACAGGGGTTCCAGGAATTG+AGG | + | chr2_4:11297889-11297908 | Msa0315110:intron | 55.0% | |
| AAACTGAGTGCATCGTGGCG+TGG | + | chr2_4:11298430-11298449 | Msa0315110:intron | 55.0% | |
| AACTGAGTGCATCGTGGCGT+GGG | + | chr2_4:11298431-11298450 | Msa0315110:intron | 55.0% | |
| GTGGGAGTTGGAAGAAGCGG+TGG | - | chr2_4:11294473-11294492 | None:intergenic | 60.0% | |
| ! | TGATGATGCGGTGGTCGGAG+GGG | - | chr2_4:11294499-11294518 | None:intergenic | 60.0% |
| ! | GATGATGATGCGGTGGTCGG+AGG | - | chr2_4:11294501-11294520 | None:intergenic | 60.0% |
| TTTGGCGGCGTTATCGGAGG+TGG | + | chr2_4:11294718-11294737 | Msa0315110:CDS | 60.0% | |
| ! | GGAGGTGGAGCATCCGTTTG+CGG | + | chr2_4:11294733-11294752 | Msa0315110:CDS | 60.0% |
| CTCGCTATCTCCGCCGCAAA+CGG | - | chr2_4:11294749-11294768 | None:intergenic | 60.0% | |
| TTGCGGCGGAGATAGCGAGA+AGG | + | chr2_4:11294750-11294769 | Msa0315110:CDS | 60.0% | |
| GGCGGAGATAGCGAGAAGGA+CGG | + | chr2_4:11294754-11294773 | Msa0315110:CDS | 60.0% | |
| GGAGATAGCGAGAAGGACGG+AGG | + | chr2_4:11294757-11294776 | Msa0315110:CDS | 60.0% | |
| TGGTTGGGCAGTGGGGAAGT+AGG | + | chr2_4:11294822-11294841 | Msa0315110:CDS | 60.0% | |
| TTGGGCAGTGGGGAAGTAGG+AGG | + | chr2_4:11294825-11294844 | Msa0315110:CDS | 60.0% | |
| GGGGAAGTAGGAGGAGGAAG+AGG | + | chr2_4:11294834-11294853 | Msa0315110:CDS | 60.0% | |
| GGCAACAGAAGCAGCAGCAG+GGG | - | chr2_4:11296040-11296059 | None:intergenic | 60.0% | |
| GGGCAACAGAAGCAGCAGCA+GGG | - | chr2_4:11296041-11296060 | None:intergenic | 60.0% | |
| CCCAGGACATTAGGCTGACC+CGG | - | chr2_4:11296441-11296460 | None:intergenic | 60.0% | |
| CCGGGTCAGCCTAATGTCCT+GGG | + | chr2_4:11296438-11296457 | Msa0315110:CDS | 60.0% | |
| CTGGAGACTCTTCTGCTCCC+AGG | - | chr2_4:11296458-11296477 | None:intergenic | 60.0% | |
| GGACCCAGCGCTGTGGTTGA+AGG | - | chr2_4:11294408-11294427 | None:intergenic | 65.0% | |
| AGGACGGGAGTAGGTGCGGT+GGG | - | chr2_4:11294429-11294448 | None:intergenic | 65.0% | |
| GGTGAGGACGGGAGTAGGTG+CGG | - | chr2_4:11294433-11294452 | None:intergenic | 65.0% | |
| TCGACGGTGAGGACGGGAGT+AGG | - | chr2_4:11294438-11294457 | None:intergenic | 65.0% | |
| GCGACATCGACGGTGAGGAC+GGG | - | chr2_4:11294444-11294463 | None:intergenic | 65.0% | |
| CGCGACATCGACGGTGAGGA+CGG | - | chr2_4:11294445-11294464 | None:intergenic | 65.0% | |
| GTGGTGCGACGCGACATCGA+CGG | - | chr2_4:11294454-11294473 | None:intergenic | 65.0% | |
| TCGGAGGGGAGAGTGGGAGT+TGG | - | chr2_4:11294485-11294504 | None:intergenic | 65.0% | |
| ! | GGTGGAGCATCCGTTTGCGG+CGG | + | chr2_4:11294736-11294755 | Msa0315110:CDS | 65.0% |
| GGCAGTGGGGAAGTAGGAGG+AGG | + | chr2_4:11294828-11294847 | Msa0315110:CDS | 65.0% | |
| CGGGCAACAGAAGCAGCAGC+AGG | - | chr2_4:11296042-11296061 | None:intergenic | 65.0% | |
| ! | TGCTGCTTCTGTTGCCCGCG+AGG | + | chr2_4:11296044-11296063 | Msa0315110:CDS | 65.0% |
| TTCTGTTGCCCGCGAGGAGC+AGG | + | chr2_4:11296050-11296069 | Msa0315110:CDS | 65.0% | |
| TCGTTGGTCCTGCTCCTCGC+GGG | - | chr2_4:11296061-11296080 | None:intergenic | 65.0% | |
| GTCGTTGGTCCTGCTCCTCG+CGG | - | chr2_4:11296062-11296081 | None:intergenic | 65.0% | |
| GCCGGGTCAGCCTAATGTCC+TGG | + | chr2_4:11296437-11296456 | Msa0315110:CDS | 65.0% | |
| GAGGACGGGAGTAGGTGCGG+TGG | - | chr2_4:11294430-11294449 | None:intergenic | 70.0% | |
| GCGACGCGACATCGACGGTG+AGG | - | chr2_4:11294449-11294468 | None:intergenic | 70.0% | |
| CGGTGGTCGGAGGGGAGAGT+GGG | - | chr2_4:11294491-11294510 | None:intergenic | 70.0% | |
| TGCGGTGGGACCCAGCGCTG+TGG | - | chr2_4:11294415-11294434 | None:intergenic | 75.0% | |
| GCGGTGGTCGGAGGGGAGAG+TGG | - | chr2_4:11294492-11294511 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 11293826 | 11299054 | 11293826 | ID=Msa0315110;Name=Msa0315110 |
| chr2_4 | mRNA | 11293826 | 11299054 | 11293826 | ID=Msa0315110-mRNA-1;Parent=Msa0315110;Name=Msa0315110-mRNA-1;_AED=0.06;_eAED=0.06;_QI=224|1|1|1|0.5|0.4|5|401|800 |
| chr2_4 | exon | 11293826 | 11293858 | 11293826 | ID=Msa0315110-mRNA-1:exon:4353;Parent=Msa0315110-mRNA-1 |
| chr2_4 | exon | 11294051 | 11294969 | 11294051 | ID=Msa0315110-mRNA-1:exon:4354;Parent=Msa0315110-mRNA-1 |
| chr2_4 | exon | 11295891 | 11297220 | 11295891 | ID=Msa0315110-mRNA-1:exon:4355;Parent=Msa0315110-mRNA-1 |
| chr2_4 | exon | 11297894 | 11298242 | 11297894 | ID=Msa0315110-mRNA-1:exon:4356;Parent=Msa0315110-mRNA-1 |
| chr2_4 | exon | 11298658 | 11299054 | 11298658 | ID=Msa0315110-mRNA-1:exon:4357;Parent=Msa0315110-mRNA-1 |
| chr2_4 | five_prime_UTR | 11293826 | 11293858 | 11293826 | ID=Msa0315110-mRNA-1:five_prime_utr;Parent=Msa0315110-mRNA-1 |
| chr2_4 | five_prime_UTR | 11294051 | 11294241 | 11294051 | ID=Msa0315110-mRNA-1:five_prime_utr;Parent=Msa0315110-mRNA-1 |
| chr2_4 | CDS | 11294242 | 11294969 | 11294242 | ID=Msa0315110-mRNA-1:cds;Parent=Msa0315110-mRNA-1 |
| chr2_4 | CDS | 11295891 | 11297220 | 11295891 | ID=Msa0315110-mRNA-1:cds;Parent=Msa0315110-mRNA-1 |
| chr2_4 | CDS | 11297894 | 11298238 | 11297894 | ID=Msa0315110-mRNA-1:cds;Parent=Msa0315110-mRNA-1 |
| chr2_4 | three_prime_UTR | 11298239 | 11298242 | 11298239 | ID=Msa0315110-mRNA-1:three_prime_utr;Parent=Msa0315110-mRNA-1 |
| chr2_4 | three_prime_UTR | 11298658 | 11299054 | 11298658 | ID=Msa0315110-mRNA-1:three_prime_utr;Parent=Msa0315110-mRNA-1 |
| Gene Sequence |
| Protein sequence |
