AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0316650


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0316650 MtrunA17_Chr2g0289181 44.589 231 33 3 257 392 2 232 1.16e-53 177
Msa0316650 MtrunA17_Chr1g0202461 60.000 60 23 1 246 305 239 297 4.24e-19 88.2
Msa0316650 MtrunA17_Chr7g0248691 49.275 69 35 0 237 305 122 190 1.59e-17 82.8
Msa0316650 MtrunA17_Chr8g0366921 51.485 101 42 2 1 101 1 94 4.62e-17 81.3
Msa0316650 MtrunA17_Chr8g0348311 55.738 61 23 1 245 305 135 191 8.81e-17 80.9
Msa0316650 MtrunA17_Chr6g0470161 44.318 88 49 0 305 392 32 119 2.61e-16 74.7
Msa0316650 MtrunA17_Chr2g0284321 50.746 67 29 1 243 305 5 71 1.05e-15 75.5
Msa0316650 MtrunA17_Chr8g0368721 61.176 85 27 2 1 85 1 79 3.44e-15 75.9
Msa0316650 MtrunA17_Chr8g0379461 65.116 43 15 0 270 312 77 119 4.45e-15 74.3
Msa0316650 MtrunA17_Chr6g0470151 49.485 97 47 1 1 95 1 97 5.05e-15 75.9
Msa0316650 MtrunA17_Chr5g0401821 47.143 70 30 1 270 332 200 269 1.05e-14 73.9
Msa0316650 MtrunA17_Chr2g0319961 42.500 80 37 1 242 312 44 123 1.26e-14 73.6
Msa0316650 MtrunA17_Chr7g0270051 46.970 66 28 1 247 305 24 89 1.69e-14 73.2
Msa0316650 MtrunA17_Chr4g0053281 51.471 68 25 2 270 334 267 329 2.78e-14 73.6
Msa0316650 MtrunA17_Chr1g0184691 74.286 35 9 0 270 304 294 328 3.94e-14 73.2
Msa0316650 MtrunA17_Chr2g0293481 43.590 78 31 2 241 305 226 303 7.71e-14 72.8
Msa0316650 MtrunA17_Chr1g0147881 74.286 35 9 0 270 304 263 297 1.08e-13 71.6
Msa0316650 MtrunA17_Chr7g0228941 46.552 58 26 1 263 320 46 98 3.33e-13 66.2
Msa0316650 MtrunA17_Chr8g0387501 65.789 38 13 0 270 307 130 167 3.46e-13 69.3
Msa0316650 MtrunA17_Chr3g0139021 39.474 76 40 2 246 320 290 360 4.98e-13 70.1
Msa0316650 MtrunA17_Chr4g0071521 71.429 35 10 0 270 304 246 280 8.15e-13 68.9
Msa0316650 MtrunA17_Chr7g0266611 50.000 88 43 1 305 392 78 164 1.69e-12 65.1
Msa0316650 MtrunA17_Chr2g0293901 43.077 195 82 4 1 168 1 193 2.80e-12 65.5
Msa0316650 MtrunA17_Chr5g0447701 48.438 64 29 2 265 328 88 147 6.85e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0316650 AT5G52830.1 58.333 60 24 1 246 305 143 201 7.61e-18 84.3
Msa0316650 AT4G01250.1 54.237 59 27 0 247 305 106 164 2.84e-17 82.0
Msa0316650 AT4G23550.1 58.491 53 22 0 253 305 124 176 2.19e-16 79.7
Msa0316650 AT1G29280.1 48.571 70 27 1 245 305 41 110 3.50e-15 75.5
Msa0316650 AT5G45050.2 45.882 85 40 2 236 320 1120 1198 5.08e-15 77.8
Msa0316650 AT5G45050.1 45.882 85 40 2 236 320 1148 1226 5.11e-15 77.8
Msa0316650 AT5G45050.4 45.882 85 40 2 236 320 1009 1087 6.17e-15 77.4
Msa0316650 AT3G58710.2 65.116 43 15 0 270 312 71 113 2.02e-14 73.2
Msa0316650 AT3G58710.1 65.116 43 15 0 270 312 72 114 2.09e-14 73.2
Msa0316650 AT4G31550.1 77.143 35 8 0 270 304 247 281 2.50e-14 73.9
Msa0316650 AT4G31550.2 77.143 35 8 0 270 304 246 280 2.57e-14 73.9
Msa0316650 AT2G24570.1 77.143 35 8 0 270 304 244 278 3.28e-14 73.6
Msa0316650 AT2G23320.1 51.562 64 23 2 270 330 241 299 3.32e-14 73.2
Msa0316650 AT5G28650.1 65.116 43 15 0 270 312 263 305 4.26e-14 73.2
Msa0316650 AT3G04670.1 74.286 35 9 0 270 304 263 297 8.95e-14 72.4
Msa0316650 AT4G24240.1 47.059 68 33 1 240 304 249 316 1.05e-13 72.4
Msa0316650 AT2G30590.1 47.541 61 29 1 247 304 288 348 4.66e-13 70.5
Msa0316650 AT2G34830.2 69.444 36 11 0 270 305 225 260 1.26e-12 69.3
Msa0316650 AT2G34830.1 69.444 36 11 0 270 305 216 251 1.33e-12 69.3
Msa0316650 AT1G30650.1 42.647 68 30 1 249 307 188 255 5.09e-12 67.4
Msa0316650 AT2G38470.1 45.333 75 36 3 253 327 169 238 3.41e-11 65.1

Find 111 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTGGGGATGGTGGTGGTC+AGG 0.219889 2_4:-13827964 None:intergenic
TTGAGGGAATGCTATGTTAT+TGG 0.232068 2_4:-13827720 None:intergenic
GATATTGTAGGTGGTGGAGG+TGG 0.278924 2_4:-13827933 None:intergenic
TGGATGTGGAGACCCTTTAA+TGG 0.287579 2_4:-13828565 None:intergenic
GTGGGGATGGTGGTGGTCAG+GGG 0.289879 2_4:-13827962 None:intergenic
ATAAATCCAGTTTCAGAATA+AGG 0.301581 2_4:-13829448 None:intergenic
TATGGACAGAAACCCATTAA+AGG 0.302088 2_4:+13828552 Msa0316650:CDS
GGTGATGTGGGTGGGGATGG+TGG 0.303024 2_4:-13827972 None:intergenic
TGGGGATGGTGGTGGTCAGG+GGG 0.305119 2_4:-13827961 None:intergenic
GGTGGGGATGGTGGTGGTCA+GGG 0.307039 2_4:-13827963 None:intergenic
TTCACATAACAACAAGATTA+TGG 0.327717 2_4:+13829369 Msa0316650:CDS
ATGAAGTCATTTGGTTTAAG+TGG 0.330576 2_4:-13827809 None:intergenic
TGGGATATTGTAGGTGGTGG+AGG 0.330741 2_4:-13827936 None:intergenic
AACTTGCCTTATTCTGAAAC+TGG 0.331215 2_4:+13829442 Msa0316650:CDS
ATCAATGCATGCAACAGGTT+TGG 0.338091 2_4:-13828251 None:intergenic
TTGGTTAGATGATTACTTAA+TGG 0.339688 2_4:+13829519 Msa0316650:CDS
CACTAAGCAAATCGAGAAAA+AGG 0.340079 2_4:+13828320 Msa0316650:CDS
TCGTGGGCATGGAGGAAATA+TGG 0.346010 2_4:+13828534 Msa0316650:CDS
GAGTGTTAGGAAATTAAAAT+TGG 0.348469 2_4:-13828179 None:intergenic
GGGGATGGTGGTGGTCAGGG+GGG 0.349141 2_4:-13827960 None:intergenic
TCAATGCATGCAACAGGTTT+GGG 0.360204 2_4:-13828250 None:intergenic
ATTGTAGGTGGTGGAGGTGG+GGG 0.360558 2_4:-13827930 None:intergenic
GATGTGGGTGGGGATGGTGG+TGG 0.361535 2_4:-13827969 None:intergenic
TATTGTAGGTGGTGGAGGTG+GGG 0.362235 2_4:-13827931 None:intergenic
TCTAAATCTATGAAGTCATT+TGG 0.362957 2_4:-13827818 None:intergenic
ATATTGTAGGTGGTGGAGGT+GGG 0.369979 2_4:-13827932 None:intergenic
GTTGGTGATGTGGGTGGGGA+TGG 0.376997 2_4:-13827975 None:intergenic
GTTGTTGTTCCGCGAGTGTT+AGG 0.379748 2_4:-13828192 None:intergenic
GGATGTGGAGACCCTTTAAT+GGG 0.385486 2_4:-13828564 None:intergenic
GGATGGGATATTGTAGGTGG+TGG 0.386256 2_4:-13827939 None:intergenic
GTAGTGGCCGTATTAGTAAT+GGG 0.386403 2_4:-13828067 None:intergenic
GTGTTCGCAGTAGAGATGAT+AGG 0.394801 2_4:-13828112 None:intergenic
AGTAGCTGGGGTGGAGATAG+TGG 0.401287 2_4:-13827870 None:intergenic
TAATGTTGGTGATGTGGGTG+GGG 0.404886 2_4:-13827979 None:intergenic
ATCCACAAATGTTAGAAACT+TGG 0.408052 2_4:+13829345 Msa0316650:CDS
GTGGTTGTGGTGGTTTCAAT+CGG 0.409952 2_4:-13827692 None:intergenic
AGGGGTCGGGGTGATTATAT+TGG 0.410652 2_4:-13828092 None:intergenic
GTTTCAATCGGAGGTGGAGG+AGG 0.417377 2_4:-13827680 None:intergenic
TGCTATGTTATTGGCGGTGG+TGG 0.423738 2_4:-13827711 None:intergenic
GTGATATCAATGCATGCAAC+AGG 0.433021 2_4:-13828256 None:intergenic
GTTATTGGCGGTGGTGGTTG+TGG 0.434702 2_4:-13827705 None:intergenic
GACCCAGCTTCTTCGACAAC+GGG 0.441727 2_4:-13829322 None:intergenic
AAAGATGGTGTGGTACTTTG+AGG 0.441819 2_4:-13827737 None:intergenic
AGTGTTAATGTTGGTGATGT+GGG 0.446897 2_4:-13827984 None:intergenic
CAGTAGAGATGATAGGGGTC+GGG 0.449702 2_4:-13828105 None:intergenic
ACCCAAGTTTCTAACATTTG+TGG 0.449992 2_4:-13829347 None:intergenic
ATGGACAGAAACCCATTAAA+GGG 0.461015 2_4:+13828553 Msa0316650:CDS
TTAATGTTGGTGATGTGGGT+GGG 0.467691 2_4:-13827980 None:intergenic
TATAGCACACCAATGCCGTT+TGG 0.476487 2_4:-13828485 None:intergenic
TCCACAAATGTTAGAAACTT+GGG 0.479230 2_4:+13829346 Msa0316650:CDS
GTGGTTTCAATCGGAGGTGG+AGG 0.483897 2_4:-13827683 None:intergenic
AAGATGGTGTGGTACTTTGA+GGG 0.484465 2_4:-13827736 None:intergenic
TTACCCGTTGTCGAAGAAGC+TGG 0.488577 2_4:+13829319 Msa0316650:CDS
GTTAGGAAATTAAAATTGGT+GGG 0.494516 2_4:-13828175 None:intergenic
TGGGGTGGAGATAGTGGGGA+TGG 0.497054 2_4:-13827864 None:intergenic
AGCAATGCTCAAGTTGTTGT+CGG 0.499521 2_4:+13829412 Msa0316650:CDS
AGTGGTGGGAGTAGTGATGG+TGG 0.500420 2_4:-13828029 None:intergenic
GTAGCTGGGGTGGAGATAGT+GGG 0.503727 2_4:-13827869 None:intergenic
GTTAATGTTGGTGATGTGGG+TGG 0.504390 2_4:-13827981 None:intergenic
TGTAGTGGCCGTATTAGTAA+TGG 0.506802 2_4:-13828068 None:intergenic
TGTTCGCAGTAGAGATGATA+GGG 0.507057 2_4:-13828111 None:intergenic
ATGGACTTCAACCGCCTCAA+TGG 0.514519 2_4:+13829538 Msa0316650:CDS
TGAAGTCATTTGGTTTAAGT+GGG 0.518400 2_4:-13827808 None:intergenic
TTAAGTGGGATAAAAGAGAA+TGG 0.519646 2_4:-13827794 None:intergenic
GTGGTGGTTTCAATCGGAGG+TGG 0.519986 2_4:-13827686 None:intergenic
GAGTAGTGATGGTGGGAGTG+TGG 0.520200 2_4:-13828021 None:intergenic
GTGAAATCATCAAAGAAAGA+TGG 0.521869 2_4:-13827752 None:intergenic
GTAATAGTATGGAGAGTGGT+GGG 0.523121 2_4:-13828043 None:intergenic
ACATAATAACCAAACGGCAT+TGG 0.525701 2_4:+13828476 Msa0316650:CDS
GAGAGTGGTGGGAGTAGTGA+TGG 0.528944 2_4:-13828032 None:intergenic
TGTTAGGAAATTAAAATTGG+TGG 0.530065 2_4:-13828176 None:intergenic
AGGGAATGCTATGTTATTGG+CGG 0.530548 2_4:-13827717 None:intergenic
GAATGCTATGTTATTGGCGG+TGG 0.531601 2_4:-13827714 None:intergenic
TGATAACAAACATAACAGCT+TGG 0.533538 2_4:+13829500 Msa0316650:CDS
GTGGTGGGAGTAGTGATGGT+GGG 0.534801 2_4:-13828028 None:intergenic
GGTGATTATATTGGTTGTAG+TGG 0.536550 2_4:-13828083 None:intergenic
ATTGGCGGTGGTGGTTGTGG+TGG 0.540132 2_4:-13827702 None:intergenic
TAGTGTTAATGTTGGTGATG+TGG 0.540874 2_4:-13827985 None:intergenic
GCAGTAGAGATGATAGGGGT+CGG 0.543866 2_4:-13828106 None:intergenic
TAAGTGGGATAAAAGAGAAT+GGG 0.549661 2_4:-13827793 None:intergenic
CAGAAAACATAATAACCAAA+CGG 0.550138 2_4:+13828470 Msa0316650:intron
AGATTGTCCAGCAAGAAGAA+AGG 0.551728 2_4:+13829065 Msa0316650:CDS
TACCCGTTGTCGAAGAAGCT+GGG 0.554513 2_4:+13829320 Msa0316650:CDS
AGTAGAGATGATAGGGGTCG+GGG 0.555014 2_4:-13828104 None:intergenic
GTTGTGGTGGTTTCAATCGG+AGG 0.560812 2_4:-13827689 None:intergenic
TGACCCAGCTTCTTCGACAA+CGG 0.566165 2_4:-13829323 None:intergenic
TGGCATACTAGTAGCTGGGG+TGG 0.566316 2_4:-13827879 None:intergenic
TTTCAAAAGACTCGTGGGCA+TGG 0.568404 2_4:+13828523 Msa0316650:CDS
CTATTACAAATGTAGCACTT+TGG 0.573456 2_4:+13829041 Msa0316650:CDS
TTAGGAAATTAAAATTGGTG+GGG 0.575907 2_4:-13828174 None:intergenic
TTTCAATCGGAGGTGGAGGA+GGG 0.591027 2_4:-13827679 None:intergenic
GACTTCAACCGCCTCAATGG+TGG 0.595091 2_4:+13829541 Msa0316650:CDS
GGGGTGGAGATAGTGGGGAT+GGG 0.599391 2_4:-13827863 None:intergenic
AGAATAGAGCACCACCATTG+AGG 0.605565 2_4:-13829552 None:intergenic
GATTTGCTTAGTGCAACTGA+TGG 0.610064 2_4:-13828310 None:intergenic
ATGAACACTAGTGTTTGTCA+TGG 0.612356 2_4:-13828137 None:intergenic
ATGTGTGTGAACCTTGGATG+TGG 0.613865 2_4:-13828579 None:intergenic
TAGCTGGGGTGGAGATAGTG+GGG 0.614917 2_4:-13827868 None:intergenic
ATCATCAAAGAAAGATGGTG+TGG 0.615055 2_4:-13827747 None:intergenic
TTAAAGGGTCTCCACATCCA+AGG 0.615060 2_4:+13828568 Msa0316650:CDS
ATGAACATTAGTGTTAATGT+TGG 0.619182 2_4:-13827993 None:intergenic
GGTAATAGTATGGAGAGTGG+TGG 0.626131 2_4:-13828044 None:intergenic
TGAGCTTTCAAAAGACTCGT+GGG 0.628685 2_4:+13828518 Msa0316650:CDS
TAGTGGCCGTATTAGTAATG+GGG 0.630367 2_4:-13828066 None:intergenic
ATGAGCTTTCAAAAGACTCG+TGG 0.638619 2_4:+13828517 Msa0316650:CDS
GGTGGTAGGAGTGGTAAATG+TGG 0.664560 2_4:-13827645 None:intergenic
CAAAAGACTCGTGGGCATGG+AGG 0.669284 2_4:+13828526 Msa0316650:CDS
ATAGAGCACCACCATTGAGG+CGG 0.679111 2_4:-13829549 None:intergenic
AGTGGCCGTATTAGTAATGG+GGG 0.703018 2_4:-13828065 None:intergenic
ACTTGAGCATTGCTACTCTG+TGG 0.710623 2_4:-13829403 None:intergenic
GTTCGCAGTAGAGATGATAG+GGG 0.735858 2_4:-13828110 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAAAATATATAAAATAAT+AGG - chr2_4:13828359-13828378 None:intergenic 0.0%
!! ATTAAAATATATAAAATAAT+AGG - chr2_4:13828359-13828378 None:intergenic 0.0%
!! TTAAAAAAGTTATTTATTAG+GGG - chr2_4:13828923-13828942 None:intergenic 10.0%
!! CTTAAAAAAGTTATTTATTA+GGG - chr2_4:13828924-13828943 None:intergenic 10.0%
!! TTAAAAAAGTTATTTATTAG+GGG - chr2_4:13828923-13828942 None:intergenic 10.0%
!! CTTAAAAAAGTTATTTATTA+GGG - chr2_4:13828924-13828943 None:intergenic 10.0%
!! TTCTAATTAAATTCAACATA+TGG + chr2_4:13828739-13828758 Msa0316650:intron 15.0%
!! GCTTAAAAAAGTTATTTATT+AGG - chr2_4:13828925-13828944 None:intergenic 15.0%
!! TTTAATAAGAATGTTGTTAT+TGG + chr2_4:13829162-13829181 Msa0316650:intron 15.0%
!! TTCTAATTAAATTCAACATA+TGG + chr2_4:13828739-13828758 Msa0316650:intron 15.0%
!! GCTTAAAAAAGTTATTTATT+AGG - chr2_4:13828925-13828944 None:intergenic 15.0%
!! TTTAATAAGAATGTTGTTAT+TGG + chr2_4:13829162-13829181 Msa0316650:intron 15.0%
!! TAGAATTATATGCAATGAAT+AGG - chr2_4:13828724-13828743 None:intergenic 20.0%
!! TAAAGGAAGTAAAAACATAT+TGG - chr2_4:13828877-13828896 None:intergenic 20.0%
!! ACTTATATTGTGATATATGA+AGG + chr2_4:13829114-13829133 Msa0316650:intron 20.0%
!! ACAACATTCTTATTAAATGT+TGG - chr2_4:13829159-13829178 None:intergenic 20.0%
!! TAGAATTATATGCAATGAAT+AGG - chr2_4:13828724-13828743 None:intergenic 20.0%
!! TAAAGGAAGTAAAAACATAT+TGG - chr2_4:13828877-13828896 None:intergenic 20.0%
!! ACTTATATTGTGATATATGA+AGG + chr2_4:13829114-13829133 Msa0316650:intron 20.0%
!! ACAACATTCTTATTAAATGT+TGG - chr2_4:13829159-13829178 None:intergenic 20.0%
! TCTAAATCTATGAAGTCATT+TGG - chr2_4:13827821-13827840 None:intergenic 25.0%
! ATGAACATTAGTGTTAATGT+TGG - chr2_4:13827996-13828015 None:intergenic 25.0%
! TTAGGAAATTAAAATTGGTG+GGG - chr2_4:13828177-13828196 None:intergenic 25.0%
! GTTAGGAAATTAAAATTGGT+GGG - chr2_4:13828178-13828197 None:intergenic 25.0%
! TGTTAGGAAATTAAAATTGG+TGG - chr2_4:13828179-13828198 None:intergenic 25.0%
! GAGTGTTAGGAAATTAAAAT+TGG - chr2_4:13828182-13828201 None:intergenic 25.0%
! TATTCTTACGTAACTTAACT+CGG + chr2_4:13828414-13828433 Msa0316650:intron 25.0%
!! TGTTTTCTGTAAGAAAAGAA+AGG - chr2_4:13828459-13828478 None:intergenic 25.0%
! CAGAAAACATAATAACCAAA+CGG + chr2_4:13828470-13828489 Msa0316650:intron 25.0%
!! AATCAATGTTTAAAACTCGA+GGG - chr2_4:13828687-13828706 None:intergenic 25.0%
!!! GAGTTTTAAACATTGATTGT+AGG + chr2_4:13828689-13828708 Msa0316650:intron 25.0%
! AACATATGGTATCTTAATCA+CGG + chr2_4:13828753-13828772 Msa0316650:intron 25.0%
! GAAAAATATGGTACACTTAA+AGG - chr2_4:13828894-13828913 None:intergenic 25.0%
!! AAATTTGTTTATGCTGAAAC+TGG + chr2_4:13828972-13828991 Msa0316650:intron 25.0%
! TTCACATAACAACAAGATTA+TGG + chr2_4:13829369-13829388 Msa0316650:CDS 25.0%
! ATAAATCCAGTTTCAGAATA+AGG - chr2_4:13829451-13829470 None:intergenic 25.0%
! TTGGTTAGATGATTACTTAA+TGG + chr2_4:13829519-13829538 Msa0316650:CDS 25.0%
! TCTAAATCTATGAAGTCATT+TGG - chr2_4:13827821-13827840 None:intergenic 25.0%
! ATGAACATTAGTGTTAATGT+TGG - chr2_4:13827996-13828015 None:intergenic 25.0%
! TTAGGAAATTAAAATTGGTG+GGG - chr2_4:13828177-13828196 None:intergenic 25.0%
! GTTAGGAAATTAAAATTGGT+GGG - chr2_4:13828178-13828197 None:intergenic 25.0%
! TGTTAGGAAATTAAAATTGG+TGG - chr2_4:13828179-13828198 None:intergenic 25.0%
! GAGTGTTAGGAAATTAAAAT+TGG - chr2_4:13828182-13828201 None:intergenic 25.0%
! TATTCTTACGTAACTTAACT+CGG + chr2_4:13828414-13828433 Msa0316650:intron 25.0%
!! TGTTTTCTGTAAGAAAAGAA+AGG - chr2_4:13828459-13828478 None:intergenic 25.0%
! CAGAAAACATAATAACCAAA+CGG + chr2_4:13828470-13828489 Msa0316650:intron 25.0%
!! AATCAATGTTTAAAACTCGA+GGG - chr2_4:13828687-13828706 None:intergenic 25.0%
!!! GAGTTTTAAACATTGATTGT+AGG + chr2_4:13828689-13828708 Msa0316650:intron 25.0%
! AACATATGGTATCTTAATCA+CGG + chr2_4:13828753-13828772 Msa0316650:intron 25.0%
! GAAAAATATGGTACACTTAA+AGG - chr2_4:13828894-13828913 None:intergenic 25.0%
!! AAATTTGTTTATGCTGAAAC+TGG + chr2_4:13828972-13828991 Msa0316650:intron 25.0%
! TTCACATAACAACAAGATTA+TGG + chr2_4:13829369-13829388 Msa0316650:CDS 25.0%
! ATAAATCCAGTTTCAGAATA+AGG - chr2_4:13829451-13829470 None:intergenic 25.0%
! TTGGTTAGATGATTACTTAA+TGG + chr2_4:13829519-13829538 Msa0316650:CDS 25.0%
GTGAAATCATCAAAGAAAGA+TGG - chr2_4:13827755-13827774 None:intergenic 30.0%
TAAGTGGGATAAAAGAGAAT+GGG - chr2_4:13827796-13827815 None:intergenic 30.0%
TTAAGTGGGATAAAAGAGAA+TGG - chr2_4:13827797-13827816 None:intergenic 30.0%
! TGAAGTCATTTGGTTTAAGT+GGG - chr2_4:13827811-13827830 None:intergenic 30.0%
! ATGAAGTCATTTGGTTTAAG+TGG - chr2_4:13827812-13827831 None:intergenic 30.0%
TATTACCCCCATTACTAATA+CGG + chr2_4:13828060-13828079 Msa0316650:CDS 30.0%
!!! TTTTAATTTCCTAACACTCG+CGG + chr2_4:13828183-13828202 Msa0316650:CDS 30.0%
GTATGCATGATAAAAATGAG+CGG - chr2_4:13828284-13828303 None:intergenic 30.0%
! CAATCAATGTTTAAAACTCG+AGG - chr2_4:13828688-13828707 None:intergenic 30.0%
! TAAACATTGATTGTAGGCAT+TGG + chr2_4:13828695-13828714 Msa0316650:intron 30.0%
! AAACATTGATTGTAGGCATT+GGG + chr2_4:13828696-13828715 Msa0316650:intron 30.0%
TAGGGGCTTAAAGAAAAATA+TGG - chr2_4:13828906-13828925 None:intergenic 30.0%
! TCAGCATAAACAAATTTTGC+AGG - chr2_4:13828969-13828988 None:intergenic 30.0%
TCTTTAATAAATGATGCTGC+AGG + chr2_4:13829016-13829035 Msa0316650:intron 30.0%
CTATTACAAATGTAGCACTT+TGG + chr2_4:13829041-13829060 Msa0316650:CDS 30.0%
! AAATTTAGGTTTGCCTAATG+TGG + chr2_4:13829198-13829217 Msa0316650:intron 30.0%
CTCTATAATAGTTCCATTTC+CGG - chr2_4:13829295-13829314 None:intergenic 30.0%
ATCCACAAATGTTAGAAACT+TGG + chr2_4:13829345-13829364 Msa0316650:CDS 30.0%
TCCACAAATGTTAGAAACTT+GGG + chr2_4:13829346-13829365 Msa0316650:CDS 30.0%
TGATAACAAACATAACAGCT+TGG + chr2_4:13829500-13829519 Msa0316650:CDS 30.0%
GTGAAATCATCAAAGAAAGA+TGG - chr2_4:13827755-13827774 None:intergenic 30.0%
TAAGTGGGATAAAAGAGAAT+GGG - chr2_4:13827796-13827815 None:intergenic 30.0%
TTAAGTGGGATAAAAGAGAA+TGG - chr2_4:13827797-13827816 None:intergenic 30.0%
! TGAAGTCATTTGGTTTAAGT+GGG - chr2_4:13827811-13827830 None:intergenic 30.0%
! ATGAAGTCATTTGGTTTAAG+TGG - chr2_4:13827812-13827831 None:intergenic 30.0%
TATTACCCCCATTACTAATA+CGG + chr2_4:13828060-13828079 Msa0316650:CDS 30.0%
!!! TTTTAATTTCCTAACACTCG+CGG + chr2_4:13828183-13828202 Msa0316650:CDS 30.0%
GTATGCATGATAAAAATGAG+CGG - chr2_4:13828284-13828303 None:intergenic 30.0%
! CAATCAATGTTTAAAACTCG+AGG - chr2_4:13828688-13828707 None:intergenic 30.0%
! TAAACATTGATTGTAGGCAT+TGG + chr2_4:13828695-13828714 Msa0316650:intron 30.0%
! AAACATTGATTGTAGGCATT+GGG + chr2_4:13828696-13828715 Msa0316650:intron 30.0%
TAGGGGCTTAAAGAAAAATA+TGG - chr2_4:13828906-13828925 None:intergenic 30.0%
! TCAGCATAAACAAATTTTGC+AGG - chr2_4:13828969-13828988 None:intergenic 30.0%
TCTTTAATAAATGATGCTGC+AGG + chr2_4:13829016-13829035 Msa0316650:intron 30.0%
CTATTACAAATGTAGCACTT+TGG + chr2_4:13829041-13829060 Msa0316650:CDS 30.0%
! AAATTTAGGTTTGCCTAATG+TGG + chr2_4:13829198-13829217 Msa0316650:intron 30.0%
CTCTATAATAGTTCCATTTC+CGG - chr2_4:13829295-13829314 None:intergenic 30.0%
ATCCACAAATGTTAGAAACT+TGG + chr2_4:13829345-13829364 Msa0316650:CDS 30.0%
TCCACAAATGTTAGAAACTT+GGG + chr2_4:13829346-13829365 Msa0316650:CDS 30.0%
TGATAACAAACATAACAGCT+TGG + chr2_4:13829500-13829519 Msa0316650:CDS 30.0%
TTGAGGGAATGCTATGTTAT+TGG - chr2_4:13827723-13827742 None:intergenic 35.0%
ATCATCAAAGAAAGATGGTG+TGG - chr2_4:13827750-13827769 None:intergenic 35.0%
!! TTTTTGGCATACTAGTAGCT+GGG - chr2_4:13827886-13827905 None:intergenic 35.0%
!!! ATTTTTGGCATACTAGTAGC+TGG - chr2_4:13827887-13827906 None:intergenic 35.0%
!!! GTGGTGATGGTATTGATTTT+TGG - chr2_4:13827902-13827921 None:intergenic 35.0%
!! AGTGTTAATGTTGGTGATGT+GGG - chr2_4:13827987-13828006 None:intergenic 35.0%
!! TAGTGTTAATGTTGGTGATG+TGG - chr2_4:13827988-13828007 None:intergenic 35.0%
! TAGTAATGGGGGTAATAGTA+TGG - chr2_4:13828057-13828076 None:intergenic 35.0%
! GGTGATTATATTGGTTGTAG+TGG - chr2_4:13828086-13828105 None:intergenic 35.0%
ATGAACACTAGTGTTTGTCA+TGG - chr2_4:13828140-13828159 None:intergenic 35.0%
CACTAAGCAAATCGAGAAAA+AGG + chr2_4:13828320-13828339 Msa0316650:CDS 35.0%
ACATAATAACCAAACGGCAT+TGG + chr2_4:13828476-13828495 Msa0316650:CDS 35.0%
TATGGACAGAAACCCATTAA+AGG + chr2_4:13828552-13828571 Msa0316650:CDS 35.0%
ATGGACAGAAACCCATTAAA+GGG + chr2_4:13828553-13828572 Msa0316650:CDS 35.0%
! TTTTGAATGTGTGTGAACCT+TGG - chr2_4:13828588-13828607 None:intergenic 35.0%
TTTAAATGTGCAGCTCATTG+TGG - chr2_4:13828829-13828848 None:intergenic 35.0%
! TTTTCTACCTTTCTTCTTGC+TGG - chr2_4:13829075-13829094 None:intergenic 35.0%
! AAACCTAAATTTGTGATGGG+AGG - chr2_4:13829190-13829209 None:intergenic 35.0%
GGCAAACCTAAATTTGTGAT+GGG - chr2_4:13829193-13829212 None:intergenic 35.0%
AGGCAAACCTAAATTTGTGA+TGG - chr2_4:13829194-13829213 None:intergenic 35.0%
AACTACAACATCACCACATT+AGG - chr2_4:13829214-13829233 None:intergenic 35.0%
GATGTTGTAGTTTGATCATC+CGG + chr2_4:13829222-13829241 Msa0316650:intron 35.0%
TGATTGATCAACGAGAACAT+GGG - chr2_4:13829260-13829279 None:intergenic 35.0%
TTGATTGATCAACGAGAACA+TGG - chr2_4:13829261-13829280 None:intergenic 35.0%
TCAATCAAACATCCCTTATC+CGG + chr2_4:13829273-13829292 Msa0316650:intron 35.0%
ATAGTTCCATTTCCGGATAA+GGG - chr2_4:13829288-13829307 None:intergenic 35.0%
AATAGTTCCATTTCCGGATA+AGG - chr2_4:13829289-13829308 None:intergenic 35.0%
ACCCAAGTTTCTAACATTTG+TGG - chr2_4:13829350-13829369 None:intergenic 35.0%
!! AACTTGCCTTATTCTGAAAC+TGG + chr2_4:13829442-13829461 Msa0316650:CDS 35.0%
TTGAGGGAATGCTATGTTAT+TGG - chr2_4:13827723-13827742 None:intergenic 35.0%
ATCATCAAAGAAAGATGGTG+TGG - chr2_4:13827750-13827769 None:intergenic 35.0%
!! TTTTTGGCATACTAGTAGCT+GGG - chr2_4:13827886-13827905 None:intergenic 35.0%
!!! ATTTTTGGCATACTAGTAGC+TGG - chr2_4:13827887-13827906 None:intergenic 35.0%
!!! GTGGTGATGGTATTGATTTT+TGG - chr2_4:13827902-13827921 None:intergenic 35.0%
!! AGTGTTAATGTTGGTGATGT+GGG - chr2_4:13827987-13828006 None:intergenic 35.0%
!! TAGTGTTAATGTTGGTGATG+TGG - chr2_4:13827988-13828007 None:intergenic 35.0%
! TAGTAATGGGGGTAATAGTA+TGG - chr2_4:13828057-13828076 None:intergenic 35.0%
! GGTGATTATATTGGTTGTAG+TGG - chr2_4:13828086-13828105 None:intergenic 35.0%
ATGAACACTAGTGTTTGTCA+TGG - chr2_4:13828140-13828159 None:intergenic 35.0%
CACTAAGCAAATCGAGAAAA+AGG + chr2_4:13828320-13828339 Msa0316650:CDS 35.0%
ACATAATAACCAAACGGCAT+TGG + chr2_4:13828476-13828495 Msa0316650:CDS 35.0%
TATGGACAGAAACCCATTAA+AGG + chr2_4:13828552-13828571 Msa0316650:CDS 35.0%
ATGGACAGAAACCCATTAAA+GGG + chr2_4:13828553-13828572 Msa0316650:CDS 35.0%
! TTTTGAATGTGTGTGAACCT+TGG - chr2_4:13828588-13828607 None:intergenic 35.0%
TTTAAATGTGCAGCTCATTG+TGG - chr2_4:13828829-13828848 None:intergenic 35.0%
! TTTTCTACCTTTCTTCTTGC+TGG - chr2_4:13829075-13829094 None:intergenic 35.0%
! AAACCTAAATTTGTGATGGG+AGG - chr2_4:13829190-13829209 None:intergenic 35.0%
GGCAAACCTAAATTTGTGAT+GGG - chr2_4:13829193-13829212 None:intergenic 35.0%
AGGCAAACCTAAATTTGTGA+TGG - chr2_4:13829194-13829213 None:intergenic 35.0%
AACTACAACATCACCACATT+AGG - chr2_4:13829214-13829233 None:intergenic 35.0%
GATGTTGTAGTTTGATCATC+CGG + chr2_4:13829222-13829241 Msa0316650:intron 35.0%
TGATTGATCAACGAGAACAT+GGG - chr2_4:13829260-13829279 None:intergenic 35.0%
TTGATTGATCAACGAGAACA+TGG - chr2_4:13829261-13829280 None:intergenic 35.0%
TCAATCAAACATCCCTTATC+CGG + chr2_4:13829273-13829292 Msa0316650:intron 35.0%
ATAGTTCCATTTCCGGATAA+GGG - chr2_4:13829288-13829307 None:intergenic 35.0%
AATAGTTCCATTTCCGGATA+AGG - chr2_4:13829289-13829308 None:intergenic 35.0%
ACCCAAGTTTCTAACATTTG+TGG - chr2_4:13829350-13829369 None:intergenic 35.0%
!! AACTTGCCTTATTCTGAAAC+TGG + chr2_4:13829442-13829461 Msa0316650:CDS 35.0%
TTCAAAAATGGTGGTAGGAG+TGG - chr2_4:13827657-13827676 None:intergenic 40.0%
AGGGAATGCTATGTTATTGG+CGG - chr2_4:13827720-13827739 None:intergenic 40.0%
AAGATGGTGTGGTACTTTGA+GGG - chr2_4:13827739-13827758 None:intergenic 40.0%
AAAGATGGTGTGGTACTTTG+AGG - chr2_4:13827740-13827759 None:intergenic 40.0%
!! AAGAGAATGGGCTCTTTTCA+TGG - chr2_4:13827784-13827803 None:intergenic 40.0%
! TTTTGGCATACTAGTAGCTG+GGG - chr2_4:13827885-13827904 None:intergenic 40.0%
!! TTAATGTTGGTGATGTGGGT+GGG - chr2_4:13827983-13828002 None:intergenic 40.0%
GTAATAGTATGGAGAGTGGT+GGG - chr2_4:13828046-13828065 None:intergenic 40.0%
TAGTGGCCGTATTAGTAATG+GGG - chr2_4:13828069-13828088 None:intergenic 40.0%
GTAGTGGCCGTATTAGTAAT+GGG - chr2_4:13828070-13828089 None:intergenic 40.0%
TGTAGTGGCCGTATTAGTAA+TGG - chr2_4:13828071-13828090 None:intergenic 40.0%
TGTTCGCAGTAGAGATGATA+GGG - chr2_4:13828114-13828133 None:intergenic 40.0%
TCAATGCATGCAACAGGTTT+GGG - chr2_4:13828253-13828272 None:intergenic 40.0%
ATCAATGCATGCAACAGGTT+TGG - chr2_4:13828254-13828273 None:intergenic 40.0%
GTGATATCAATGCATGCAAC+AGG - chr2_4:13828259-13828278 None:intergenic 40.0%
! GATTTGCTTAGTGCAACTGA+TGG - chr2_4:13828313-13828332 None:intergenic 40.0%
ATGAGCTTTCAAAAGACTCG+TGG + chr2_4:13828517-13828536 Msa0316650:CDS 40.0%
TGAGCTTTCAAAAGACTCGT+GGG + chr2_4:13828518-13828537 Msa0316650:CDS 40.0%
! ATGTTTAAAACTCGAGGGTG+CGG - chr2_4:13828682-13828701 None:intergenic 40.0%
GCTCATTGTGGATAATTGAG+TGG - chr2_4:13828817-13828836 None:intergenic 40.0%
AGATTGTCCAGCAAGAAGAA+AGG + chr2_4:13829065-13829084 Msa0316650:CDS 40.0%
GTACCTCCCATCACAAATTT+AGG + chr2_4:13829184-13829203 Msa0316650:intron 40.0%
AAACATCCCTTATCCGGAAA+TGG + chr2_4:13829279-13829298 Msa0316650:intron 40.0%
! AGCAATGCTCAAGTTGTTGT+CGG + chr2_4:13829412-13829431 Msa0316650:CDS 40.0%
TTCAAAAATGGTGGTAGGAG+TGG - chr2_4:13827657-13827676 None:intergenic 40.0%
AGGGAATGCTATGTTATTGG+CGG - chr2_4:13827720-13827739 None:intergenic 40.0%
AAGATGGTGTGGTACTTTGA+GGG - chr2_4:13827739-13827758 None:intergenic 40.0%
AAAGATGGTGTGGTACTTTG+AGG - chr2_4:13827740-13827759 None:intergenic 40.0%
!! AAGAGAATGGGCTCTTTTCA+TGG - chr2_4:13827784-13827803 None:intergenic 40.0%
! TTTTGGCATACTAGTAGCTG+GGG - chr2_4:13827885-13827904 None:intergenic 40.0%
!! TTAATGTTGGTGATGTGGGT+GGG - chr2_4:13827983-13828002 None:intergenic 40.0%
GTAATAGTATGGAGAGTGGT+GGG - chr2_4:13828046-13828065 None:intergenic 40.0%
TAGTGGCCGTATTAGTAATG+GGG - chr2_4:13828069-13828088 None:intergenic 40.0%
GTAGTGGCCGTATTAGTAAT+GGG - chr2_4:13828070-13828089 None:intergenic 40.0%
TGTAGTGGCCGTATTAGTAA+TGG - chr2_4:13828071-13828090 None:intergenic 40.0%
TGTTCGCAGTAGAGATGATA+GGG - chr2_4:13828114-13828133 None:intergenic 40.0%
TCAATGCATGCAACAGGTTT+GGG - chr2_4:13828253-13828272 None:intergenic 40.0%
ATCAATGCATGCAACAGGTT+TGG - chr2_4:13828254-13828273 None:intergenic 40.0%
GTGATATCAATGCATGCAAC+AGG - chr2_4:13828259-13828278 None:intergenic 40.0%
! GATTTGCTTAGTGCAACTGA+TGG - chr2_4:13828313-13828332 None:intergenic 40.0%
ATGAGCTTTCAAAAGACTCG+TGG + chr2_4:13828517-13828536 Msa0316650:CDS 40.0%
TGAGCTTTCAAAAGACTCGT+GGG + chr2_4:13828518-13828537 Msa0316650:CDS 40.0%
! ATGTTTAAAACTCGAGGGTG+CGG - chr2_4:13828682-13828701 None:intergenic 40.0%
GCTCATTGTGGATAATTGAG+TGG - chr2_4:13828817-13828836 None:intergenic 40.0%
AGATTGTCCAGCAAGAAGAA+AGG + chr2_4:13829065-13829084 Msa0316650:CDS 40.0%
GTACCTCCCATCACAAATTT+AGG + chr2_4:13829184-13829203 Msa0316650:intron 40.0%
AAACATCCCTTATCCGGAAA+TGG + chr2_4:13829279-13829298 Msa0316650:intron 40.0%
! AGCAATGCTCAAGTTGTTGT+CGG + chr2_4:13829412-13829431 Msa0316650:CDS 40.0%
GGGTCTTCAAAAATGGTGGT+AGG - chr2_4:13827662-13827681 None:intergenic 45.0%
AGGAGGGTCTTCAAAAATGG+TGG - chr2_4:13827666-13827685 None:intergenic 45.0%
TGGAGGAGGGTCTTCAAAAA+TGG - chr2_4:13827669-13827688 None:intergenic 45.0%
GTGGTTGTGGTGGTTTCAAT+CGG - chr2_4:13827695-13827714 None:intergenic 45.0%
GAATGCTATGTTATTGGCGG+TGG - chr2_4:13827717-13827736 None:intergenic 45.0%
!! ATATTGTAGGTGGTGGAGGT+GGG - chr2_4:13827935-13827954 None:intergenic 45.0%
!! TAATGTTGGTGATGTGGGTG+GGG - chr2_4:13827982-13828001 None:intergenic 45.0%
!! GTTAATGTTGGTGATGTGGG+TGG - chr2_4:13827984-13828003 None:intergenic 45.0%
GGTAATAGTATGGAGAGTGG+TGG - chr2_4:13828047-13828066 None:intergenic 45.0%
AGTGGCCGTATTAGTAATGG+GGG - chr2_4:13828068-13828087 None:intergenic 45.0%
GTTCGCAGTAGAGATGATAG+GGG - chr2_4:13828113-13828132 None:intergenic 45.0%
GTGTTCGCAGTAGAGATGAT+AGG - chr2_4:13828115-13828134 None:intergenic 45.0%
TATAGCACACCAATGCCGTT+TGG - chr2_4:13828488-13828507 None:intergenic 45.0%
TTTCAAAAGACTCGTGGGCA+TGG + chr2_4:13828523-13828542 Msa0316650:CDS 45.0%
GGATGTGGAGACCCTTTAAT+GGG - chr2_4:13828567-13828586 None:intergenic 45.0%
TGGATGTGGAGACCCTTTAA+TGG - chr2_4:13828568-13828587 None:intergenic 45.0%
TTAAAGGGTCTCCACATCCA+AGG + chr2_4:13828568-13828587 Msa0316650:CDS 45.0%
ATGTGTGTGAACCTTGGATG+TGG - chr2_4:13828582-13828601 None:intergenic 45.0%
!! AGGGTGCGGTTGTTTGTTTT+AGG - chr2_4:13828668-13828687 None:intergenic 45.0%
! ACTTGAGCATTGCTACTCTG+TGG - chr2_4:13829406-13829425 None:intergenic 45.0%
! AGAATAGAGCACCACCATTG+AGG - chr2_4:13829555-13829574 None:intergenic 45.0%
GGGTCTTCAAAAATGGTGGT+AGG - chr2_4:13827662-13827681 None:intergenic 45.0%
AGGAGGGTCTTCAAAAATGG+TGG - chr2_4:13827666-13827685 None:intergenic 45.0%
TGGAGGAGGGTCTTCAAAAA+TGG - chr2_4:13827669-13827688 None:intergenic 45.0%
GTGGTTGTGGTGGTTTCAAT+CGG - chr2_4:13827695-13827714 None:intergenic 45.0%
GAATGCTATGTTATTGGCGG+TGG - chr2_4:13827717-13827736 None:intergenic 45.0%
!! ATATTGTAGGTGGTGGAGGT+GGG - chr2_4:13827935-13827954 None:intergenic 45.0%
!! TAATGTTGGTGATGTGGGTG+GGG - chr2_4:13827982-13828001 None:intergenic 45.0%
!! GTTAATGTTGGTGATGTGGG+TGG - chr2_4:13827984-13828003 None:intergenic 45.0%
GGTAATAGTATGGAGAGTGG+TGG - chr2_4:13828047-13828066 None:intergenic 45.0%
AGTGGCCGTATTAGTAATGG+GGG - chr2_4:13828068-13828087 None:intergenic 45.0%
GTTCGCAGTAGAGATGATAG+GGG - chr2_4:13828113-13828132 None:intergenic 45.0%
GTGTTCGCAGTAGAGATGAT+AGG - chr2_4:13828115-13828134 None:intergenic 45.0%
TATAGCACACCAATGCCGTT+TGG - chr2_4:13828488-13828507 None:intergenic 45.0%
TTTCAAAAGACTCGTGGGCA+TGG + chr2_4:13828523-13828542 Msa0316650:CDS 45.0%
GGATGTGGAGACCCTTTAAT+GGG - chr2_4:13828567-13828586 None:intergenic 45.0%
TGGATGTGGAGACCCTTTAA+TGG - chr2_4:13828568-13828587 None:intergenic 45.0%
TTAAAGGGTCTCCACATCCA+AGG + chr2_4:13828568-13828587 Msa0316650:CDS 45.0%
ATGTGTGTGAACCTTGGATG+TGG - chr2_4:13828582-13828601 None:intergenic 45.0%
!! AGGGTGCGGTTGTTTGTTTT+AGG - chr2_4:13828668-13828687 None:intergenic 45.0%
! ACTTGAGCATTGCTACTCTG+TGG - chr2_4:13829406-13829425 None:intergenic 45.0%
! AGAATAGAGCACCACCATTG+AGG - chr2_4:13829555-13829574 None:intergenic 45.0%
!! AAATAATATCAATTTATTAT+TGG + chr2_4:13828849-13828868 Msa0316650:intron 5.0%
!! AAATAATATCAATTTATTAT+TGG + chr2_4:13828849-13828868 Msa0316650:intron 5.0%
GGTGGTAGGAGTGGTAAATG+TGG - chr2_4:13827648-13827667 None:intergenic 50.0%
TTTCAATCGGAGGTGGAGGA+GGG - chr2_4:13827682-13827701 None:intergenic 50.0%
GTTGTGGTGGTTTCAATCGG+AGG - chr2_4:13827692-13827711 None:intergenic 50.0%
TGCTATGTTATTGGCGGTGG+TGG - chr2_4:13827714-13827733 None:intergenic 50.0%
!! TATTGTAGGTGGTGGAGGTG+GGG - chr2_4:13827934-13827953 None:intergenic 50.0%
!! GATATTGTAGGTGGTGGAGG+TGG - chr2_4:13827936-13827955 None:intergenic 50.0%
! TGGGATATTGTAGGTGGTGG+AGG - chr2_4:13827939-13827958 None:intergenic 50.0%
GGATGGGATATTGTAGGTGG+TGG - chr2_4:13827942-13827961 None:intergenic 50.0%
GGGGGTAATAGTATGGAGAG+TGG - chr2_4:13828050-13828069 None:intergenic 50.0%
AGGGGTCGGGGTGATTATAT+TGG - chr2_4:13828095-13828114 None:intergenic 50.0%
AGTAGAGATGATAGGGGTCG+GGG - chr2_4:13828107-13828126 None:intergenic 50.0%
CAGTAGAGATGATAGGGGTC+GGG - chr2_4:13828108-13828127 None:intergenic 50.0%
GCAGTAGAGATGATAGGGGT+CGG - chr2_4:13828109-13828128 None:intergenic 50.0%
! GTTGTTGTTCCGCGAGTGTT+AGG - chr2_4:13828195-13828214 None:intergenic 50.0%
TCGTGGGCATGGAGGAAATA+TGG + chr2_4:13828534-13828553 Msa0316650:CDS 50.0%
TTACCCGTTGTCGAAGAAGC+TGG + chr2_4:13829319-13829338 Msa0316650:CDS 50.0%
TACCCGTTGTCGAAGAAGCT+GGG + chr2_4:13829320-13829339 Msa0316650:CDS 50.0%
TGACCCAGCTTCTTCGACAA+CGG - chr2_4:13829326-13829345 None:intergenic 50.0%
ATGGACTTCAACCGCCTCAA+TGG + chr2_4:13829538-13829557 Msa0316650:CDS 50.0%
! ATAGAGCACCACCATTGAGG+CGG - chr2_4:13829552-13829571 None:intergenic 50.0%
GGTGGTAGGAGTGGTAAATG+TGG - chr2_4:13827648-13827667 None:intergenic 50.0%
TTTCAATCGGAGGTGGAGGA+GGG - chr2_4:13827682-13827701 None:intergenic 50.0%
GTTGTGGTGGTTTCAATCGG+AGG - chr2_4:13827692-13827711 None:intergenic 50.0%
TGCTATGTTATTGGCGGTGG+TGG - chr2_4:13827714-13827733 None:intergenic 50.0%
!! TATTGTAGGTGGTGGAGGTG+GGG - chr2_4:13827934-13827953 None:intergenic 50.0%
!! GATATTGTAGGTGGTGGAGG+TGG - chr2_4:13827936-13827955 None:intergenic 50.0%
! TGGGATATTGTAGGTGGTGG+AGG - chr2_4:13827939-13827958 None:intergenic 50.0%
GGATGGGATATTGTAGGTGG+TGG - chr2_4:13827942-13827961 None:intergenic 50.0%
GGGGGTAATAGTATGGAGAG+TGG - chr2_4:13828050-13828069 None:intergenic 50.0%
AGGGGTCGGGGTGATTATAT+TGG - chr2_4:13828095-13828114 None:intergenic 50.0%
AGTAGAGATGATAGGGGTCG+GGG - chr2_4:13828107-13828126 None:intergenic 50.0%
CAGTAGAGATGATAGGGGTC+GGG - chr2_4:13828108-13828127 None:intergenic 50.0%
GCAGTAGAGATGATAGGGGT+CGG - chr2_4:13828109-13828128 None:intergenic 50.0%
! GTTGTTGTTCCGCGAGTGTT+AGG - chr2_4:13828195-13828214 None:intergenic 50.0%
TCGTGGGCATGGAGGAAATA+TGG + chr2_4:13828534-13828553 Msa0316650:CDS 50.0%
TTACCCGTTGTCGAAGAAGC+TGG + chr2_4:13829319-13829338 Msa0316650:CDS 50.0%
TACCCGTTGTCGAAGAAGCT+GGG + chr2_4:13829320-13829339 Msa0316650:CDS 50.0%
TGACCCAGCTTCTTCGACAA+CGG - chr2_4:13829326-13829345 None:intergenic 50.0%
ATGGACTTCAACCGCCTCAA+TGG + chr2_4:13829538-13829557 Msa0316650:CDS 50.0%
! ATAGAGCACCACCATTGAGG+CGG - chr2_4:13829552-13829571 None:intergenic 50.0%
GTTTCAATCGGAGGTGGAGG+AGG - chr2_4:13827683-13827702 None:intergenic 55.0%
GTGGTTTCAATCGGAGGTGG+AGG - chr2_4:13827686-13827705 None:intergenic 55.0%
GTGGTGGTTTCAATCGGAGG+TGG - chr2_4:13827689-13827708 None:intergenic 55.0%
! GTTATTGGCGGTGGTGGTTG+TGG - chr2_4:13827708-13827727 None:intergenic 55.0%
TAGCTGGGGTGGAGATAGTG+GGG - chr2_4:13827871-13827890 None:intergenic 55.0%
GTAGCTGGGGTGGAGATAGT+GGG - chr2_4:13827872-13827891 None:intergenic 55.0%
AGTAGCTGGGGTGGAGATAG+TGG - chr2_4:13827873-13827892 None:intergenic 55.0%
TGGCATACTAGTAGCTGGGG+TGG - chr2_4:13827882-13827901 None:intergenic 55.0%
!! ATTGTAGGTGGTGGAGGTGG+GGG - chr2_4:13827933-13827952 None:intergenic 55.0%
GGGGGATGGGATATTGTAGG+TGG - chr2_4:13827945-13827964 None:intergenic 55.0%
CAGGGGGGATGGGATATTGT+AGG - chr2_4:13827948-13827967 None:intergenic 55.0%
!! GAGTAGTGATGGTGGGAGTG+TGG - chr2_4:13828024-13828043 None:intergenic 55.0%
! GTGGTGGGAGTAGTGATGGT+GGG - chr2_4:13828031-13828050 None:intergenic 55.0%
! AGTGGTGGGAGTAGTGATGG+TGG - chr2_4:13828032-13828051 None:intergenic 55.0%
! GAGAGTGGTGGGAGTAGTGA+TGG - chr2_4:13828035-13828054 None:intergenic 55.0%
CAAAAGACTCGTGGGCATGG+AGG + chr2_4:13828526-13828545 Msa0316650:CDS 55.0%
! ACATGGGCATTGCTGCTCTC+CGG - chr2_4:13829244-13829263 None:intergenic 55.0%
GACCCAGCTTCTTCGACAAC+GGG - chr2_4:13829325-13829344 None:intergenic 55.0%
GACTTCAACCGCCTCAATGG+TGG + chr2_4:13829541-13829560 Msa0316650:CDS 55.0%
GTTTCAATCGGAGGTGGAGG+AGG - chr2_4:13827683-13827702 None:intergenic 55.0%
GTGGTTTCAATCGGAGGTGG+AGG - chr2_4:13827686-13827705 None:intergenic 55.0%
GTGGTGGTTTCAATCGGAGG+TGG - chr2_4:13827689-13827708 None:intergenic 55.0%
! GTTATTGGCGGTGGTGGTTG+TGG - chr2_4:13827708-13827727 None:intergenic 55.0%
TAGCTGGGGTGGAGATAGTG+GGG - chr2_4:13827871-13827890 None:intergenic 55.0%
GTAGCTGGGGTGGAGATAGT+GGG - chr2_4:13827872-13827891 None:intergenic 55.0%
AGTAGCTGGGGTGGAGATAG+TGG - chr2_4:13827873-13827892 None:intergenic 55.0%
TGGCATACTAGTAGCTGGGG+TGG - chr2_4:13827882-13827901 None:intergenic 55.0%
!! ATTGTAGGTGGTGGAGGTGG+GGG - chr2_4:13827933-13827952 None:intergenic 55.0%
GGGGGATGGGATATTGTAGG+TGG - chr2_4:13827945-13827964 None:intergenic 55.0%
CAGGGGGGATGGGATATTGT+AGG - chr2_4:13827948-13827967 None:intergenic 55.0%
!! GAGTAGTGATGGTGGGAGTG+TGG - chr2_4:13828024-13828043 None:intergenic 55.0%
! GTGGTGGGAGTAGTGATGGT+GGG - chr2_4:13828031-13828050 None:intergenic 55.0%
! AGTGGTGGGAGTAGTGATGG+TGG - chr2_4:13828032-13828051 None:intergenic 55.0%
! GAGAGTGGTGGGAGTAGTGA+TGG - chr2_4:13828035-13828054 None:intergenic 55.0%
CAAAAGACTCGTGGGCATGG+AGG + chr2_4:13828526-13828545 Msa0316650:CDS 55.0%
! ACATGGGCATTGCTGCTCTC+CGG - chr2_4:13829244-13829263 None:intergenic 55.0%
GACCCAGCTTCTTCGACAAC+GGG - chr2_4:13829325-13829344 None:intergenic 55.0%
GACTTCAACCGCCTCAATGG+TGG + chr2_4:13829541-13829560 Msa0316650:CDS 55.0%
! ATTGGCGGTGGTGGTTGTGG+TGG - chr2_4:13827705-13827724 None:intergenic 60.0%
!! GGGGTGGAGATAGTGGGGAT+GGG - chr2_4:13827866-13827885 None:intergenic 60.0%
!! TGGGGTGGAGATAGTGGGGA+TGG - chr2_4:13827867-13827886 None:intergenic 60.0%
! GGGGGAAGATGTGGTGGTGA+TGG - chr2_4:13827915-13827934 None:intergenic 60.0%
!! GTTGGTGATGTGGGTGGGGA+TGG - chr2_4:13827978-13827997 None:intergenic 60.0%
! ATTGGCGGTGGTGGTTGTGG+TGG - chr2_4:13827705-13827724 None:intergenic 60.0%
!! GGGGTGGAGATAGTGGGGAT+GGG - chr2_4:13827866-13827885 None:intergenic 60.0%
!! TGGGGTGGAGATAGTGGGGA+TGG - chr2_4:13827867-13827886 None:intergenic 60.0%
! GGGGGAAGATGTGGTGGTGA+TGG - chr2_4:13827915-13827934 None:intergenic 60.0%
!! GTTGGTGATGTGGGTGGGGA+TGG - chr2_4:13827978-13827997 None:intergenic 60.0%
GGAGGTGGGGGAAGATGTGG+TGG - chr2_4:13827921-13827940 None:intergenic 65.0%
GGTGGAGGTGGGGGAAGATG+TGG - chr2_4:13827924-13827943 None:intergenic 65.0%
!! TGGTGGTGGTCAGGGGGGAT+GGG - chr2_4:13827958-13827977 None:intergenic 65.0%
!! ATGGTGGTGGTCAGGGGGGA+TGG - chr2_4:13827959-13827978 None:intergenic 65.0%
!! TGGGGATGGTGGTGGTCAGG+GGG - chr2_4:13827964-13827983 None:intergenic 65.0%
!! GTGGGGATGGTGGTGGTCAG+GGG - chr2_4:13827965-13827984 None:intergenic 65.0%
!! GGTGGGGATGGTGGTGGTCA+GGG - chr2_4:13827966-13827985 None:intergenic 65.0%
! GATGTGGGTGGGGATGGTGG+TGG - chr2_4:13827972-13827991 None:intergenic 65.0%
GGTGATGTGGGTGGGGATGG+TGG - chr2_4:13827975-13827994 None:intergenic 65.0%
GGAGGTGGGGGAAGATGTGG+TGG - chr2_4:13827921-13827940 None:intergenic 65.0%
GGTGGAGGTGGGGGAAGATG+TGG - chr2_4:13827924-13827943 None:intergenic 65.0%
!! TGGTGGTGGTCAGGGGGGAT+GGG - chr2_4:13827958-13827977 None:intergenic 65.0%
!! ATGGTGGTGGTCAGGGGGGA+TGG - chr2_4:13827959-13827978 None:intergenic 65.0%
!! TGGGGATGGTGGTGGTCAGG+GGG - chr2_4:13827964-13827983 None:intergenic 65.0%
!! GTGGGGATGGTGGTGGTCAG+GGG - chr2_4:13827965-13827984 None:intergenic 65.0%
!! GGTGGGGATGGTGGTGGTCA+GGG - chr2_4:13827966-13827985 None:intergenic 65.0%
! GATGTGGGTGGGGATGGTGG+TGG - chr2_4:13827972-13827991 None:intergenic 65.0%
GGTGATGTGGGTGGGGATGG+TGG - chr2_4:13827975-13827994 None:intergenic 65.0%
!! GGGGATGGTGGTGGTCAGGG+GGG - chr2_4:13827963-13827982 None:intergenic 70.0%
!! GGGTGGGGATGGTGGTGGTC+AGG - chr2_4:13827967-13827986 None:intergenic 70.0%
!! GGGGATGGTGGTGGTCAGGG+GGG - chr2_4:13827963-13827982 None:intergenic 70.0%
!! GGGTGGGGATGGTGGTGGTC+AGG - chr2_4:13827967-13827986 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 13827593 13829579 13827593 ID=Msa0316650;Name=Msa0316650
chr2_4 mRNA 13827593 13829579 13827593 ID=Msa0316650-mRNA-1;Parent=Msa0316650;Name=Msa0316650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|4|0|393
chr2_4 exon 13827593 13828341 13827593 ID=Msa0316650-mRNA-1:exon:5241;Parent=Msa0316650-mRNA-1
chr2_4 exon 13828473 13828589 13828473 ID=Msa0316650-mRNA-1:exon:5242;Parent=Msa0316650-mRNA-1
chr2_4 exon 13829038 13829086 13829038 ID=Msa0316650-mRNA-1:exon:5243;Parent=Msa0316650-mRNA-1
chr2_4 exon 13829313 13829579 13829313 ID=Msa0316650-mRNA-1:exon:5244;Parent=Msa0316650-mRNA-1
chr2_4 CDS 13827593 13828341 13827593 ID=Msa0316650-mRNA-1:cds;Parent=Msa0316650-mRNA-1
chr2_4 CDS 13828473 13828589 13828473 ID=Msa0316650-mRNA-1:cds;Parent=Msa0316650-mRNA-1
chr2_4 CDS 13829038 13829086 13829038 ID=Msa0316650-mRNA-1:cds;Parent=Msa0316650-mRNA-1
chr2_4 CDS 13829313 13829579 13829313 ID=Msa0316650-mRNA-1:cds;Parent=Msa0316650-mRNA-1
Gene Sequence

>Msa0316650

ATGGATAATGATGATTGTGATCTTTTTTCTATTGTACGTAGCTGCAACGCTACCACATTTACCACTCCTACCACCATTTTTGAAGACCCTCCTCCACCTCCGATTGAAACCACCACAACCACCACCGCCAATAACATAGCATTCCCTCAAAGTACCACACCATCTTTCTTTGATGATTTCACTTTTAACCATGAAAAGAGCCCATTCTCTTTTATCCCACTTAAACCAAATGACTTCATAGATTTAGATAAATTGATGATAAATTTCAATCCCATCCCCACTATCTCCACCCCAGCTACTAGTATGCCAAAAATCAATACCATCACCACCACATCTTCCCCCACCTCCACCACCTACAATATCCCATCCCCCCTGACCACCACCATCCCCACCCACATCACCAACATTAACACTAATGTTCATGCTATCCACACTCCCACCATCACTACTCCCACCACTCTCCATACTATTACCCCCATTACTAATACGGCCACTACAACCAATATAATCACCCCGACCCCTATCATCTCTACTGCGAACACTACCATGACAAACACTAGTGTTCATGAAATCAATCAATACCCCACCAATTTTAATTTCCTAACACTCGCGGAACAACAACTGATTCAACAAAACATCAACAATCAAGTGTCTGTTCCCAAACCTGTTGCATGCATTGATATCACAACCGCTCATTTTTATCATGCATACAAACATCCATCAGTTGCACTAAGCAAATCGAGAAAAAGAAAACATAATAACCAAACGGCATTGGTGTGCTATATGAGAGAAGATGAGCTTTCAAAAGACTCGTGGGCATGGAGGAAATATGGACAGAAACCCATTAAAGGGTCTCCACATCCAAGGAGCTATTACAAATGTAGCACTTTGGCAGATTGTCCAGCAAGAAGAAAGAGTCAATTACCCGTTGTCGAAGAAGCTGGGTCATCCACAAATGTTAGAAACTTGGGTTCACATAACAACAAGATTATGGAGTTTGATGAGCCACAGAGTAGCAATGCTCAAGTTGTTGTCGGTGACTCAAACTTGCCTTATTCTGAAACTGGATTTATTAGAAGCTTTGATGATGATGACAATATTTTGATAACAAACATAACAGCTTGGTTAGATGATTACTTAATGGACTTCAACCGCCTCAATGGTGGTGCTCTATTCTCTTAG

Protein sequence

>Msa0316650

MDNDDCDLFSIVRSCNATTFTTPTTIFEDPPPPPIETTTTTTANNIAFPQSTTPSFFDDFTFNHEKSPFSFIPLKPNDFIDLDKLMINFNPIPTISTPATSMPKINTITTTSSPTSTTYNIPSPLTTTIPTHITNINTNVHAIHTPTITTPTTLHTITPITNTATTTNIITPTPIISTANTTMTNTSVHEINQYPTNFNFLTLAEQQLIQQNINNQVSVPKPVACIDITTAHFYHAYKHPSVALSKSRKRKHNNQTALVCYMREDELSKDSWAWRKYGQKPIKGSPHPRSYYKCSTLADCPARRKSQLPVVEEAGSSTNVRNLGSHNNKIMEFDEPQSSNAQVVVGDSNLPYSETGFIRSFDDDDNILITNITAWLDDYLMDFNRLNGGALFS*