Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316650 | XP_024632663.2 | 58.197 | 488 | 89 | 8 | 1 | 392 | 1 | 469 | 2.54e-155 | 456 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316650 | sp|Q9FLX8|WRK27_ARATH | 58.333 | 60 | 24 | 1 | 246 | 305 | 143 | 201 | 7.49e-17 | 84.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|---|---|
Msa0316650 | TF | WRKY |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316650 | MtrunA17_Chr2g0289181 | 44.589 | 231 | 33 | 3 | 257 | 392 | 2 | 232 | 1.16e-53 | 177 |
Msa0316650 | MtrunA17_Chr1g0202461 | 60.000 | 60 | 23 | 1 | 246 | 305 | 239 | 297 | 4.24e-19 | 88.2 |
Msa0316650 | MtrunA17_Chr7g0248691 | 49.275 | 69 | 35 | 0 | 237 | 305 | 122 | 190 | 1.59e-17 | 82.8 |
Msa0316650 | MtrunA17_Chr8g0366921 | 51.485 | 101 | 42 | 2 | 1 | 101 | 1 | 94 | 4.62e-17 | 81.3 |
Msa0316650 | MtrunA17_Chr8g0348311 | 55.738 | 61 | 23 | 1 | 245 | 305 | 135 | 191 | 8.81e-17 | 80.9 |
Msa0316650 | MtrunA17_Chr6g0470161 | 44.318 | 88 | 49 | 0 | 305 | 392 | 32 | 119 | 2.61e-16 | 74.7 |
Msa0316650 | MtrunA17_Chr2g0284321 | 50.746 | 67 | 29 | 1 | 243 | 305 | 5 | 71 | 1.05e-15 | 75.5 |
Msa0316650 | MtrunA17_Chr8g0368721 | 61.176 | 85 | 27 | 2 | 1 | 85 | 1 | 79 | 3.44e-15 | 75.9 |
Msa0316650 | MtrunA17_Chr8g0379461 | 65.116 | 43 | 15 | 0 | 270 | 312 | 77 | 119 | 4.45e-15 | 74.3 |
Msa0316650 | MtrunA17_Chr6g0470151 | 49.485 | 97 | 47 | 1 | 1 | 95 | 1 | 97 | 5.05e-15 | 75.9 |
Msa0316650 | MtrunA17_Chr5g0401821 | 47.143 | 70 | 30 | 1 | 270 | 332 | 200 | 269 | 1.05e-14 | 73.9 |
Msa0316650 | MtrunA17_Chr2g0319961 | 42.500 | 80 | 37 | 1 | 242 | 312 | 44 | 123 | 1.26e-14 | 73.6 |
Msa0316650 | MtrunA17_Chr7g0270051 | 46.970 | 66 | 28 | 1 | 247 | 305 | 24 | 89 | 1.69e-14 | 73.2 |
Msa0316650 | MtrunA17_Chr4g0053281 | 51.471 | 68 | 25 | 2 | 270 | 334 | 267 | 329 | 2.78e-14 | 73.6 |
Msa0316650 | MtrunA17_Chr1g0184691 | 74.286 | 35 | 9 | 0 | 270 | 304 | 294 | 328 | 3.94e-14 | 73.2 |
Msa0316650 | MtrunA17_Chr2g0293481 | 43.590 | 78 | 31 | 2 | 241 | 305 | 226 | 303 | 7.71e-14 | 72.8 |
Msa0316650 | MtrunA17_Chr1g0147881 | 74.286 | 35 | 9 | 0 | 270 | 304 | 263 | 297 | 1.08e-13 | 71.6 |
Msa0316650 | MtrunA17_Chr7g0228941 | 46.552 | 58 | 26 | 1 | 263 | 320 | 46 | 98 | 3.33e-13 | 66.2 |
Msa0316650 | MtrunA17_Chr8g0387501 | 65.789 | 38 | 13 | 0 | 270 | 307 | 130 | 167 | 3.46e-13 | 69.3 |
Msa0316650 | MtrunA17_Chr3g0139021 | 39.474 | 76 | 40 | 2 | 246 | 320 | 290 | 360 | 4.98e-13 | 70.1 |
Msa0316650 | MtrunA17_Chr4g0071521 | 71.429 | 35 | 10 | 0 | 270 | 304 | 246 | 280 | 8.15e-13 | 68.9 |
Msa0316650 | MtrunA17_Chr7g0266611 | 50.000 | 88 | 43 | 1 | 305 | 392 | 78 | 164 | 1.69e-12 | 65.1 |
Msa0316650 | MtrunA17_Chr2g0293901 | 43.077 | 195 | 82 | 4 | 1 | 168 | 1 | 193 | 2.80e-12 | 65.5 |
Msa0316650 | MtrunA17_Chr5g0447701 | 48.438 | 64 | 29 | 2 | 265 | 328 | 88 | 147 | 6.85e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0316650 | AT5G52830.1 | 58.333 | 60 | 24 | 1 | 246 | 305 | 143 | 201 | 7.61e-18 | 84.3 |
Msa0316650 | AT4G01250.1 | 54.237 | 59 | 27 | 0 | 247 | 305 | 106 | 164 | 2.84e-17 | 82.0 |
Msa0316650 | AT4G23550.1 | 58.491 | 53 | 22 | 0 | 253 | 305 | 124 | 176 | 2.19e-16 | 79.7 |
Msa0316650 | AT1G29280.1 | 48.571 | 70 | 27 | 1 | 245 | 305 | 41 | 110 | 3.50e-15 | 75.5 |
Msa0316650 | AT5G45050.2 | 45.882 | 85 | 40 | 2 | 236 | 320 | 1120 | 1198 | 5.08e-15 | 77.8 |
Msa0316650 | AT5G45050.1 | 45.882 | 85 | 40 | 2 | 236 | 320 | 1148 | 1226 | 5.11e-15 | 77.8 |
Msa0316650 | AT5G45050.4 | 45.882 | 85 | 40 | 2 | 236 | 320 | 1009 | 1087 | 6.17e-15 | 77.4 |
Msa0316650 | AT3G58710.2 | 65.116 | 43 | 15 | 0 | 270 | 312 | 71 | 113 | 2.02e-14 | 73.2 |
Msa0316650 | AT3G58710.1 | 65.116 | 43 | 15 | 0 | 270 | 312 | 72 | 114 | 2.09e-14 | 73.2 |
Msa0316650 | AT4G31550.1 | 77.143 | 35 | 8 | 0 | 270 | 304 | 247 | 281 | 2.50e-14 | 73.9 |
Msa0316650 | AT4G31550.2 | 77.143 | 35 | 8 | 0 | 270 | 304 | 246 | 280 | 2.57e-14 | 73.9 |
Msa0316650 | AT2G24570.1 | 77.143 | 35 | 8 | 0 | 270 | 304 | 244 | 278 | 3.28e-14 | 73.6 |
Msa0316650 | AT2G23320.1 | 51.562 | 64 | 23 | 2 | 270 | 330 | 241 | 299 | 3.32e-14 | 73.2 |
Msa0316650 | AT5G28650.1 | 65.116 | 43 | 15 | 0 | 270 | 312 | 263 | 305 | 4.26e-14 | 73.2 |
Msa0316650 | AT3G04670.1 | 74.286 | 35 | 9 | 0 | 270 | 304 | 263 | 297 | 8.95e-14 | 72.4 |
Msa0316650 | AT4G24240.1 | 47.059 | 68 | 33 | 1 | 240 | 304 | 249 | 316 | 1.05e-13 | 72.4 |
Msa0316650 | AT2G30590.1 | 47.541 | 61 | 29 | 1 | 247 | 304 | 288 | 348 | 4.66e-13 | 70.5 |
Msa0316650 | AT2G34830.2 | 69.444 | 36 | 11 | 0 | 270 | 305 | 225 | 260 | 1.26e-12 | 69.3 |
Msa0316650 | AT2G34830.1 | 69.444 | 36 | 11 | 0 | 270 | 305 | 216 | 251 | 1.33e-12 | 69.3 |
Msa0316650 | AT1G30650.1 | 42.647 | 68 | 30 | 1 | 249 | 307 | 188 | 255 | 5.09e-12 | 67.4 |
Msa0316650 | AT2G38470.1 | 45.333 | 75 | 36 | 3 | 253 | 327 | 169 | 238 | 3.41e-11 | 65.1 |
Find 111 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGTGGGGATGGTGGTGGTC+AGG | 0.219889 | 2_4:-13827964 | None:intergenic |
TTGAGGGAATGCTATGTTAT+TGG | 0.232068 | 2_4:-13827720 | None:intergenic |
GATATTGTAGGTGGTGGAGG+TGG | 0.278924 | 2_4:-13827933 | None:intergenic |
TGGATGTGGAGACCCTTTAA+TGG | 0.287579 | 2_4:-13828565 | None:intergenic |
GTGGGGATGGTGGTGGTCAG+GGG | 0.289879 | 2_4:-13827962 | None:intergenic |
ATAAATCCAGTTTCAGAATA+AGG | 0.301581 | 2_4:-13829448 | None:intergenic |
TATGGACAGAAACCCATTAA+AGG | 0.302088 | 2_4:+13828552 | Msa0316650:CDS |
GGTGATGTGGGTGGGGATGG+TGG | 0.303024 | 2_4:-13827972 | None:intergenic |
TGGGGATGGTGGTGGTCAGG+GGG | 0.305119 | 2_4:-13827961 | None:intergenic |
GGTGGGGATGGTGGTGGTCA+GGG | 0.307039 | 2_4:-13827963 | None:intergenic |
TTCACATAACAACAAGATTA+TGG | 0.327717 | 2_4:+13829369 | Msa0316650:CDS |
ATGAAGTCATTTGGTTTAAG+TGG | 0.330576 | 2_4:-13827809 | None:intergenic |
TGGGATATTGTAGGTGGTGG+AGG | 0.330741 | 2_4:-13827936 | None:intergenic |
AACTTGCCTTATTCTGAAAC+TGG | 0.331215 | 2_4:+13829442 | Msa0316650:CDS |
ATCAATGCATGCAACAGGTT+TGG | 0.338091 | 2_4:-13828251 | None:intergenic |
TTGGTTAGATGATTACTTAA+TGG | 0.339688 | 2_4:+13829519 | Msa0316650:CDS |
CACTAAGCAAATCGAGAAAA+AGG | 0.340079 | 2_4:+13828320 | Msa0316650:CDS |
TCGTGGGCATGGAGGAAATA+TGG | 0.346010 | 2_4:+13828534 | Msa0316650:CDS |
GAGTGTTAGGAAATTAAAAT+TGG | 0.348469 | 2_4:-13828179 | None:intergenic |
GGGGATGGTGGTGGTCAGGG+GGG | 0.349141 | 2_4:-13827960 | None:intergenic |
TCAATGCATGCAACAGGTTT+GGG | 0.360204 | 2_4:-13828250 | None:intergenic |
ATTGTAGGTGGTGGAGGTGG+GGG | 0.360558 | 2_4:-13827930 | None:intergenic |
GATGTGGGTGGGGATGGTGG+TGG | 0.361535 | 2_4:-13827969 | None:intergenic |
TATTGTAGGTGGTGGAGGTG+GGG | 0.362235 | 2_4:-13827931 | None:intergenic |
TCTAAATCTATGAAGTCATT+TGG | 0.362957 | 2_4:-13827818 | None:intergenic |
ATATTGTAGGTGGTGGAGGT+GGG | 0.369979 | 2_4:-13827932 | None:intergenic |
GTTGGTGATGTGGGTGGGGA+TGG | 0.376997 | 2_4:-13827975 | None:intergenic |
GTTGTTGTTCCGCGAGTGTT+AGG | 0.379748 | 2_4:-13828192 | None:intergenic |
GGATGTGGAGACCCTTTAAT+GGG | 0.385486 | 2_4:-13828564 | None:intergenic |
GGATGGGATATTGTAGGTGG+TGG | 0.386256 | 2_4:-13827939 | None:intergenic |
GTAGTGGCCGTATTAGTAAT+GGG | 0.386403 | 2_4:-13828067 | None:intergenic |
GTGTTCGCAGTAGAGATGAT+AGG | 0.394801 | 2_4:-13828112 | None:intergenic |
AGTAGCTGGGGTGGAGATAG+TGG | 0.401287 | 2_4:-13827870 | None:intergenic |
TAATGTTGGTGATGTGGGTG+GGG | 0.404886 | 2_4:-13827979 | None:intergenic |
ATCCACAAATGTTAGAAACT+TGG | 0.408052 | 2_4:+13829345 | Msa0316650:CDS |
GTGGTTGTGGTGGTTTCAAT+CGG | 0.409952 | 2_4:-13827692 | None:intergenic |
AGGGGTCGGGGTGATTATAT+TGG | 0.410652 | 2_4:-13828092 | None:intergenic |
GTTTCAATCGGAGGTGGAGG+AGG | 0.417377 | 2_4:-13827680 | None:intergenic |
TGCTATGTTATTGGCGGTGG+TGG | 0.423738 | 2_4:-13827711 | None:intergenic |
GTGATATCAATGCATGCAAC+AGG | 0.433021 | 2_4:-13828256 | None:intergenic |
GTTATTGGCGGTGGTGGTTG+TGG | 0.434702 | 2_4:-13827705 | None:intergenic |
GACCCAGCTTCTTCGACAAC+GGG | 0.441727 | 2_4:-13829322 | None:intergenic |
AAAGATGGTGTGGTACTTTG+AGG | 0.441819 | 2_4:-13827737 | None:intergenic |
AGTGTTAATGTTGGTGATGT+GGG | 0.446897 | 2_4:-13827984 | None:intergenic |
CAGTAGAGATGATAGGGGTC+GGG | 0.449702 | 2_4:-13828105 | None:intergenic |
ACCCAAGTTTCTAACATTTG+TGG | 0.449992 | 2_4:-13829347 | None:intergenic |
ATGGACAGAAACCCATTAAA+GGG | 0.461015 | 2_4:+13828553 | Msa0316650:CDS |
TTAATGTTGGTGATGTGGGT+GGG | 0.467691 | 2_4:-13827980 | None:intergenic |
TATAGCACACCAATGCCGTT+TGG | 0.476487 | 2_4:-13828485 | None:intergenic |
TCCACAAATGTTAGAAACTT+GGG | 0.479230 | 2_4:+13829346 | Msa0316650:CDS |
GTGGTTTCAATCGGAGGTGG+AGG | 0.483897 | 2_4:-13827683 | None:intergenic |
AAGATGGTGTGGTACTTTGA+GGG | 0.484465 | 2_4:-13827736 | None:intergenic |
TTACCCGTTGTCGAAGAAGC+TGG | 0.488577 | 2_4:+13829319 | Msa0316650:CDS |
GTTAGGAAATTAAAATTGGT+GGG | 0.494516 | 2_4:-13828175 | None:intergenic |
TGGGGTGGAGATAGTGGGGA+TGG | 0.497054 | 2_4:-13827864 | None:intergenic |
AGCAATGCTCAAGTTGTTGT+CGG | 0.499521 | 2_4:+13829412 | Msa0316650:CDS |
AGTGGTGGGAGTAGTGATGG+TGG | 0.500420 | 2_4:-13828029 | None:intergenic |
GTAGCTGGGGTGGAGATAGT+GGG | 0.503727 | 2_4:-13827869 | None:intergenic |
GTTAATGTTGGTGATGTGGG+TGG | 0.504390 | 2_4:-13827981 | None:intergenic |
TGTAGTGGCCGTATTAGTAA+TGG | 0.506802 | 2_4:-13828068 | None:intergenic |
TGTTCGCAGTAGAGATGATA+GGG | 0.507057 | 2_4:-13828111 | None:intergenic |
ATGGACTTCAACCGCCTCAA+TGG | 0.514519 | 2_4:+13829538 | Msa0316650:CDS |
TGAAGTCATTTGGTTTAAGT+GGG | 0.518400 | 2_4:-13827808 | None:intergenic |
TTAAGTGGGATAAAAGAGAA+TGG | 0.519646 | 2_4:-13827794 | None:intergenic |
GTGGTGGTTTCAATCGGAGG+TGG | 0.519986 | 2_4:-13827686 | None:intergenic |
GAGTAGTGATGGTGGGAGTG+TGG | 0.520200 | 2_4:-13828021 | None:intergenic |
GTGAAATCATCAAAGAAAGA+TGG | 0.521869 | 2_4:-13827752 | None:intergenic |
GTAATAGTATGGAGAGTGGT+GGG | 0.523121 | 2_4:-13828043 | None:intergenic |
ACATAATAACCAAACGGCAT+TGG | 0.525701 | 2_4:+13828476 | Msa0316650:CDS |
GAGAGTGGTGGGAGTAGTGA+TGG | 0.528944 | 2_4:-13828032 | None:intergenic |
TGTTAGGAAATTAAAATTGG+TGG | 0.530065 | 2_4:-13828176 | None:intergenic |
AGGGAATGCTATGTTATTGG+CGG | 0.530548 | 2_4:-13827717 | None:intergenic |
GAATGCTATGTTATTGGCGG+TGG | 0.531601 | 2_4:-13827714 | None:intergenic |
TGATAACAAACATAACAGCT+TGG | 0.533538 | 2_4:+13829500 | Msa0316650:CDS |
GTGGTGGGAGTAGTGATGGT+GGG | 0.534801 | 2_4:-13828028 | None:intergenic |
GGTGATTATATTGGTTGTAG+TGG | 0.536550 | 2_4:-13828083 | None:intergenic |
ATTGGCGGTGGTGGTTGTGG+TGG | 0.540132 | 2_4:-13827702 | None:intergenic |
TAGTGTTAATGTTGGTGATG+TGG | 0.540874 | 2_4:-13827985 | None:intergenic |
GCAGTAGAGATGATAGGGGT+CGG | 0.543866 | 2_4:-13828106 | None:intergenic |
TAAGTGGGATAAAAGAGAAT+GGG | 0.549661 | 2_4:-13827793 | None:intergenic |
CAGAAAACATAATAACCAAA+CGG | 0.550138 | 2_4:+13828470 | Msa0316650:intron |
AGATTGTCCAGCAAGAAGAA+AGG | 0.551728 | 2_4:+13829065 | Msa0316650:CDS |
TACCCGTTGTCGAAGAAGCT+GGG | 0.554513 | 2_4:+13829320 | Msa0316650:CDS |
AGTAGAGATGATAGGGGTCG+GGG | 0.555014 | 2_4:-13828104 | None:intergenic |
GTTGTGGTGGTTTCAATCGG+AGG | 0.560812 | 2_4:-13827689 | None:intergenic |
TGACCCAGCTTCTTCGACAA+CGG | 0.566165 | 2_4:-13829323 | None:intergenic |
TGGCATACTAGTAGCTGGGG+TGG | 0.566316 | 2_4:-13827879 | None:intergenic |
TTTCAAAAGACTCGTGGGCA+TGG | 0.568404 | 2_4:+13828523 | Msa0316650:CDS |
CTATTACAAATGTAGCACTT+TGG | 0.573456 | 2_4:+13829041 | Msa0316650:CDS |
TTAGGAAATTAAAATTGGTG+GGG | 0.575907 | 2_4:-13828174 | None:intergenic |
TTTCAATCGGAGGTGGAGGA+GGG | 0.591027 | 2_4:-13827679 | None:intergenic |
GACTTCAACCGCCTCAATGG+TGG | 0.595091 | 2_4:+13829541 | Msa0316650:CDS |
GGGGTGGAGATAGTGGGGAT+GGG | 0.599391 | 2_4:-13827863 | None:intergenic |
AGAATAGAGCACCACCATTG+AGG | 0.605565 | 2_4:-13829552 | None:intergenic |
GATTTGCTTAGTGCAACTGA+TGG | 0.610064 | 2_4:-13828310 | None:intergenic |
ATGAACACTAGTGTTTGTCA+TGG | 0.612356 | 2_4:-13828137 | None:intergenic |
ATGTGTGTGAACCTTGGATG+TGG | 0.613865 | 2_4:-13828579 | None:intergenic |
TAGCTGGGGTGGAGATAGTG+GGG | 0.614917 | 2_4:-13827868 | None:intergenic |
ATCATCAAAGAAAGATGGTG+TGG | 0.615055 | 2_4:-13827747 | None:intergenic |
TTAAAGGGTCTCCACATCCA+AGG | 0.615060 | 2_4:+13828568 | Msa0316650:CDS |
ATGAACATTAGTGTTAATGT+TGG | 0.619182 | 2_4:-13827993 | None:intergenic |
GGTAATAGTATGGAGAGTGG+TGG | 0.626131 | 2_4:-13828044 | None:intergenic |
TGAGCTTTCAAAAGACTCGT+GGG | 0.628685 | 2_4:+13828518 | Msa0316650:CDS |
TAGTGGCCGTATTAGTAATG+GGG | 0.630367 | 2_4:-13828066 | None:intergenic |
ATGAGCTTTCAAAAGACTCG+TGG | 0.638619 | 2_4:+13828517 | Msa0316650:CDS |
GGTGGTAGGAGTGGTAAATG+TGG | 0.664560 | 2_4:-13827645 | None:intergenic |
CAAAAGACTCGTGGGCATGG+AGG | 0.669284 | 2_4:+13828526 | Msa0316650:CDS |
ATAGAGCACCACCATTGAGG+CGG | 0.679111 | 2_4:-13829549 | None:intergenic |
AGTGGCCGTATTAGTAATGG+GGG | 0.703018 | 2_4:-13828065 | None:intergenic |
ACTTGAGCATTGCTACTCTG+TGG | 0.710623 | 2_4:-13829403 | None:intergenic |
GTTCGCAGTAGAGATGATAG+GGG | 0.735858 | 2_4:-13828110 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAAAATATATAAAATAAT+AGG | - | chr2_4:13828359-13828378 | None:intergenic | 0.0% |
!! | ATTAAAATATATAAAATAAT+AGG | - | chr2_4:13828359-13828378 | None:intergenic | 0.0% |
!! | TTAAAAAAGTTATTTATTAG+GGG | - | chr2_4:13828923-13828942 | None:intergenic | 10.0% |
!! | CTTAAAAAAGTTATTTATTA+GGG | - | chr2_4:13828924-13828943 | None:intergenic | 10.0% |
!! | TTAAAAAAGTTATTTATTAG+GGG | - | chr2_4:13828923-13828942 | None:intergenic | 10.0% |
!! | CTTAAAAAAGTTATTTATTA+GGG | - | chr2_4:13828924-13828943 | None:intergenic | 10.0% |
!! | TTCTAATTAAATTCAACATA+TGG | + | chr2_4:13828739-13828758 | Msa0316650:intron | 15.0% |
!! | GCTTAAAAAAGTTATTTATT+AGG | - | chr2_4:13828925-13828944 | None:intergenic | 15.0% |
!! | TTTAATAAGAATGTTGTTAT+TGG | + | chr2_4:13829162-13829181 | Msa0316650:intron | 15.0% |
!! | TTCTAATTAAATTCAACATA+TGG | + | chr2_4:13828739-13828758 | Msa0316650:intron | 15.0% |
!! | GCTTAAAAAAGTTATTTATT+AGG | - | chr2_4:13828925-13828944 | None:intergenic | 15.0% |
!! | TTTAATAAGAATGTTGTTAT+TGG | + | chr2_4:13829162-13829181 | Msa0316650:intron | 15.0% |
!! | TAGAATTATATGCAATGAAT+AGG | - | chr2_4:13828724-13828743 | None:intergenic | 20.0% |
!! | TAAAGGAAGTAAAAACATAT+TGG | - | chr2_4:13828877-13828896 | None:intergenic | 20.0% |
!! | ACTTATATTGTGATATATGA+AGG | + | chr2_4:13829114-13829133 | Msa0316650:intron | 20.0% |
!! | ACAACATTCTTATTAAATGT+TGG | - | chr2_4:13829159-13829178 | None:intergenic | 20.0% |
!! | TAGAATTATATGCAATGAAT+AGG | - | chr2_4:13828724-13828743 | None:intergenic | 20.0% |
!! | TAAAGGAAGTAAAAACATAT+TGG | - | chr2_4:13828877-13828896 | None:intergenic | 20.0% |
!! | ACTTATATTGTGATATATGA+AGG | + | chr2_4:13829114-13829133 | Msa0316650:intron | 20.0% |
!! | ACAACATTCTTATTAAATGT+TGG | - | chr2_4:13829159-13829178 | None:intergenic | 20.0% |
! | TCTAAATCTATGAAGTCATT+TGG | - | chr2_4:13827821-13827840 | None:intergenic | 25.0% |
! | ATGAACATTAGTGTTAATGT+TGG | - | chr2_4:13827996-13828015 | None:intergenic | 25.0% |
! | TTAGGAAATTAAAATTGGTG+GGG | - | chr2_4:13828177-13828196 | None:intergenic | 25.0% |
! | GTTAGGAAATTAAAATTGGT+GGG | - | chr2_4:13828178-13828197 | None:intergenic | 25.0% |
! | TGTTAGGAAATTAAAATTGG+TGG | - | chr2_4:13828179-13828198 | None:intergenic | 25.0% |
! | GAGTGTTAGGAAATTAAAAT+TGG | - | chr2_4:13828182-13828201 | None:intergenic | 25.0% |
! | TATTCTTACGTAACTTAACT+CGG | + | chr2_4:13828414-13828433 | Msa0316650:intron | 25.0% |
!! | TGTTTTCTGTAAGAAAAGAA+AGG | - | chr2_4:13828459-13828478 | None:intergenic | 25.0% |
! | CAGAAAACATAATAACCAAA+CGG | + | chr2_4:13828470-13828489 | Msa0316650:intron | 25.0% |
!! | AATCAATGTTTAAAACTCGA+GGG | - | chr2_4:13828687-13828706 | None:intergenic | 25.0% |
!!! | GAGTTTTAAACATTGATTGT+AGG | + | chr2_4:13828689-13828708 | Msa0316650:intron | 25.0% |
! | AACATATGGTATCTTAATCA+CGG | + | chr2_4:13828753-13828772 | Msa0316650:intron | 25.0% |
! | GAAAAATATGGTACACTTAA+AGG | - | chr2_4:13828894-13828913 | None:intergenic | 25.0% |
!! | AAATTTGTTTATGCTGAAAC+TGG | + | chr2_4:13828972-13828991 | Msa0316650:intron | 25.0% |
! | TTCACATAACAACAAGATTA+TGG | + | chr2_4:13829369-13829388 | Msa0316650:CDS | 25.0% |
! | ATAAATCCAGTTTCAGAATA+AGG | - | chr2_4:13829451-13829470 | None:intergenic | 25.0% |
! | TTGGTTAGATGATTACTTAA+TGG | + | chr2_4:13829519-13829538 | Msa0316650:CDS | 25.0% |
! | TCTAAATCTATGAAGTCATT+TGG | - | chr2_4:13827821-13827840 | None:intergenic | 25.0% |
! | ATGAACATTAGTGTTAATGT+TGG | - | chr2_4:13827996-13828015 | None:intergenic | 25.0% |
! | TTAGGAAATTAAAATTGGTG+GGG | - | chr2_4:13828177-13828196 | None:intergenic | 25.0% |
! | GTTAGGAAATTAAAATTGGT+GGG | - | chr2_4:13828178-13828197 | None:intergenic | 25.0% |
! | TGTTAGGAAATTAAAATTGG+TGG | - | chr2_4:13828179-13828198 | None:intergenic | 25.0% |
! | GAGTGTTAGGAAATTAAAAT+TGG | - | chr2_4:13828182-13828201 | None:intergenic | 25.0% |
! | TATTCTTACGTAACTTAACT+CGG | + | chr2_4:13828414-13828433 | Msa0316650:intron | 25.0% |
!! | TGTTTTCTGTAAGAAAAGAA+AGG | - | chr2_4:13828459-13828478 | None:intergenic | 25.0% |
! | CAGAAAACATAATAACCAAA+CGG | + | chr2_4:13828470-13828489 | Msa0316650:intron | 25.0% |
!! | AATCAATGTTTAAAACTCGA+GGG | - | chr2_4:13828687-13828706 | None:intergenic | 25.0% |
!!! | GAGTTTTAAACATTGATTGT+AGG | + | chr2_4:13828689-13828708 | Msa0316650:intron | 25.0% |
! | AACATATGGTATCTTAATCA+CGG | + | chr2_4:13828753-13828772 | Msa0316650:intron | 25.0% |
! | GAAAAATATGGTACACTTAA+AGG | - | chr2_4:13828894-13828913 | None:intergenic | 25.0% |
!! | AAATTTGTTTATGCTGAAAC+TGG | + | chr2_4:13828972-13828991 | Msa0316650:intron | 25.0% |
! | TTCACATAACAACAAGATTA+TGG | + | chr2_4:13829369-13829388 | Msa0316650:CDS | 25.0% |
! | ATAAATCCAGTTTCAGAATA+AGG | - | chr2_4:13829451-13829470 | None:intergenic | 25.0% |
! | TTGGTTAGATGATTACTTAA+TGG | + | chr2_4:13829519-13829538 | Msa0316650:CDS | 25.0% |
GTGAAATCATCAAAGAAAGA+TGG | - | chr2_4:13827755-13827774 | None:intergenic | 30.0% | |
TAAGTGGGATAAAAGAGAAT+GGG | - | chr2_4:13827796-13827815 | None:intergenic | 30.0% | |
TTAAGTGGGATAAAAGAGAA+TGG | - | chr2_4:13827797-13827816 | None:intergenic | 30.0% | |
! | TGAAGTCATTTGGTTTAAGT+GGG | - | chr2_4:13827811-13827830 | None:intergenic | 30.0% |
! | ATGAAGTCATTTGGTTTAAG+TGG | - | chr2_4:13827812-13827831 | None:intergenic | 30.0% |
TATTACCCCCATTACTAATA+CGG | + | chr2_4:13828060-13828079 | Msa0316650:CDS | 30.0% | |
!!! | TTTTAATTTCCTAACACTCG+CGG | + | chr2_4:13828183-13828202 | Msa0316650:CDS | 30.0% |
GTATGCATGATAAAAATGAG+CGG | - | chr2_4:13828284-13828303 | None:intergenic | 30.0% | |
! | CAATCAATGTTTAAAACTCG+AGG | - | chr2_4:13828688-13828707 | None:intergenic | 30.0% |
! | TAAACATTGATTGTAGGCAT+TGG | + | chr2_4:13828695-13828714 | Msa0316650:intron | 30.0% |
! | AAACATTGATTGTAGGCATT+GGG | + | chr2_4:13828696-13828715 | Msa0316650:intron | 30.0% |
TAGGGGCTTAAAGAAAAATA+TGG | - | chr2_4:13828906-13828925 | None:intergenic | 30.0% | |
! | TCAGCATAAACAAATTTTGC+AGG | - | chr2_4:13828969-13828988 | None:intergenic | 30.0% |
TCTTTAATAAATGATGCTGC+AGG | + | chr2_4:13829016-13829035 | Msa0316650:intron | 30.0% | |
CTATTACAAATGTAGCACTT+TGG | + | chr2_4:13829041-13829060 | Msa0316650:CDS | 30.0% | |
! | AAATTTAGGTTTGCCTAATG+TGG | + | chr2_4:13829198-13829217 | Msa0316650:intron | 30.0% |
CTCTATAATAGTTCCATTTC+CGG | - | chr2_4:13829295-13829314 | None:intergenic | 30.0% | |
ATCCACAAATGTTAGAAACT+TGG | + | chr2_4:13829345-13829364 | Msa0316650:CDS | 30.0% | |
TCCACAAATGTTAGAAACTT+GGG | + | chr2_4:13829346-13829365 | Msa0316650:CDS | 30.0% | |
TGATAACAAACATAACAGCT+TGG | + | chr2_4:13829500-13829519 | Msa0316650:CDS | 30.0% | |
GTGAAATCATCAAAGAAAGA+TGG | - | chr2_4:13827755-13827774 | None:intergenic | 30.0% | |
TAAGTGGGATAAAAGAGAAT+GGG | - | chr2_4:13827796-13827815 | None:intergenic | 30.0% | |
TTAAGTGGGATAAAAGAGAA+TGG | - | chr2_4:13827797-13827816 | None:intergenic | 30.0% | |
! | TGAAGTCATTTGGTTTAAGT+GGG | - | chr2_4:13827811-13827830 | None:intergenic | 30.0% |
! | ATGAAGTCATTTGGTTTAAG+TGG | - | chr2_4:13827812-13827831 | None:intergenic | 30.0% |
TATTACCCCCATTACTAATA+CGG | + | chr2_4:13828060-13828079 | Msa0316650:CDS | 30.0% | |
!!! | TTTTAATTTCCTAACACTCG+CGG | + | chr2_4:13828183-13828202 | Msa0316650:CDS | 30.0% |
GTATGCATGATAAAAATGAG+CGG | - | chr2_4:13828284-13828303 | None:intergenic | 30.0% | |
! | CAATCAATGTTTAAAACTCG+AGG | - | chr2_4:13828688-13828707 | None:intergenic | 30.0% |
! | TAAACATTGATTGTAGGCAT+TGG | + | chr2_4:13828695-13828714 | Msa0316650:intron | 30.0% |
! | AAACATTGATTGTAGGCATT+GGG | + | chr2_4:13828696-13828715 | Msa0316650:intron | 30.0% |
TAGGGGCTTAAAGAAAAATA+TGG | - | chr2_4:13828906-13828925 | None:intergenic | 30.0% | |
! | TCAGCATAAACAAATTTTGC+AGG | - | chr2_4:13828969-13828988 | None:intergenic | 30.0% |
TCTTTAATAAATGATGCTGC+AGG | + | chr2_4:13829016-13829035 | Msa0316650:intron | 30.0% | |
CTATTACAAATGTAGCACTT+TGG | + | chr2_4:13829041-13829060 | Msa0316650:CDS | 30.0% | |
! | AAATTTAGGTTTGCCTAATG+TGG | + | chr2_4:13829198-13829217 | Msa0316650:intron | 30.0% |
CTCTATAATAGTTCCATTTC+CGG | - | chr2_4:13829295-13829314 | None:intergenic | 30.0% | |
ATCCACAAATGTTAGAAACT+TGG | + | chr2_4:13829345-13829364 | Msa0316650:CDS | 30.0% | |
TCCACAAATGTTAGAAACTT+GGG | + | chr2_4:13829346-13829365 | Msa0316650:CDS | 30.0% | |
TGATAACAAACATAACAGCT+TGG | + | chr2_4:13829500-13829519 | Msa0316650:CDS | 30.0% | |
TTGAGGGAATGCTATGTTAT+TGG | - | chr2_4:13827723-13827742 | None:intergenic | 35.0% | |
ATCATCAAAGAAAGATGGTG+TGG | - | chr2_4:13827750-13827769 | None:intergenic | 35.0% | |
!! | TTTTTGGCATACTAGTAGCT+GGG | - | chr2_4:13827886-13827905 | None:intergenic | 35.0% |
!!! | ATTTTTGGCATACTAGTAGC+TGG | - | chr2_4:13827887-13827906 | None:intergenic | 35.0% |
!!! | GTGGTGATGGTATTGATTTT+TGG | - | chr2_4:13827902-13827921 | None:intergenic | 35.0% |
!! | AGTGTTAATGTTGGTGATGT+GGG | - | chr2_4:13827987-13828006 | None:intergenic | 35.0% |
!! | TAGTGTTAATGTTGGTGATG+TGG | - | chr2_4:13827988-13828007 | None:intergenic | 35.0% |
! | TAGTAATGGGGGTAATAGTA+TGG | - | chr2_4:13828057-13828076 | None:intergenic | 35.0% |
! | GGTGATTATATTGGTTGTAG+TGG | - | chr2_4:13828086-13828105 | None:intergenic | 35.0% |
ATGAACACTAGTGTTTGTCA+TGG | - | chr2_4:13828140-13828159 | None:intergenic | 35.0% | |
CACTAAGCAAATCGAGAAAA+AGG | + | chr2_4:13828320-13828339 | Msa0316650:CDS | 35.0% | |
ACATAATAACCAAACGGCAT+TGG | + | chr2_4:13828476-13828495 | Msa0316650:CDS | 35.0% | |
TATGGACAGAAACCCATTAA+AGG | + | chr2_4:13828552-13828571 | Msa0316650:CDS | 35.0% | |
ATGGACAGAAACCCATTAAA+GGG | + | chr2_4:13828553-13828572 | Msa0316650:CDS | 35.0% | |
! | TTTTGAATGTGTGTGAACCT+TGG | - | chr2_4:13828588-13828607 | None:intergenic | 35.0% |
TTTAAATGTGCAGCTCATTG+TGG | - | chr2_4:13828829-13828848 | None:intergenic | 35.0% | |
! | TTTTCTACCTTTCTTCTTGC+TGG | - | chr2_4:13829075-13829094 | None:intergenic | 35.0% |
! | AAACCTAAATTTGTGATGGG+AGG | - | chr2_4:13829190-13829209 | None:intergenic | 35.0% |
GGCAAACCTAAATTTGTGAT+GGG | - | chr2_4:13829193-13829212 | None:intergenic | 35.0% | |
AGGCAAACCTAAATTTGTGA+TGG | - | chr2_4:13829194-13829213 | None:intergenic | 35.0% | |
AACTACAACATCACCACATT+AGG | - | chr2_4:13829214-13829233 | None:intergenic | 35.0% | |
GATGTTGTAGTTTGATCATC+CGG | + | chr2_4:13829222-13829241 | Msa0316650:intron | 35.0% | |
TGATTGATCAACGAGAACAT+GGG | - | chr2_4:13829260-13829279 | None:intergenic | 35.0% | |
TTGATTGATCAACGAGAACA+TGG | - | chr2_4:13829261-13829280 | None:intergenic | 35.0% | |
TCAATCAAACATCCCTTATC+CGG | + | chr2_4:13829273-13829292 | Msa0316650:intron | 35.0% | |
ATAGTTCCATTTCCGGATAA+GGG | - | chr2_4:13829288-13829307 | None:intergenic | 35.0% | |
AATAGTTCCATTTCCGGATA+AGG | - | chr2_4:13829289-13829308 | None:intergenic | 35.0% | |
ACCCAAGTTTCTAACATTTG+TGG | - | chr2_4:13829350-13829369 | None:intergenic | 35.0% | |
!! | AACTTGCCTTATTCTGAAAC+TGG | + | chr2_4:13829442-13829461 | Msa0316650:CDS | 35.0% |
TTGAGGGAATGCTATGTTAT+TGG | - | chr2_4:13827723-13827742 | None:intergenic | 35.0% | |
ATCATCAAAGAAAGATGGTG+TGG | - | chr2_4:13827750-13827769 | None:intergenic | 35.0% | |
!! | TTTTTGGCATACTAGTAGCT+GGG | - | chr2_4:13827886-13827905 | None:intergenic | 35.0% |
!!! | ATTTTTGGCATACTAGTAGC+TGG | - | chr2_4:13827887-13827906 | None:intergenic | 35.0% |
!!! | GTGGTGATGGTATTGATTTT+TGG | - | chr2_4:13827902-13827921 | None:intergenic | 35.0% |
!! | AGTGTTAATGTTGGTGATGT+GGG | - | chr2_4:13827987-13828006 | None:intergenic | 35.0% |
!! | TAGTGTTAATGTTGGTGATG+TGG | - | chr2_4:13827988-13828007 | None:intergenic | 35.0% |
! | TAGTAATGGGGGTAATAGTA+TGG | - | chr2_4:13828057-13828076 | None:intergenic | 35.0% |
! | GGTGATTATATTGGTTGTAG+TGG | - | chr2_4:13828086-13828105 | None:intergenic | 35.0% |
ATGAACACTAGTGTTTGTCA+TGG | - | chr2_4:13828140-13828159 | None:intergenic | 35.0% | |
CACTAAGCAAATCGAGAAAA+AGG | + | chr2_4:13828320-13828339 | Msa0316650:CDS | 35.0% | |
ACATAATAACCAAACGGCAT+TGG | + | chr2_4:13828476-13828495 | Msa0316650:CDS | 35.0% | |
TATGGACAGAAACCCATTAA+AGG | + | chr2_4:13828552-13828571 | Msa0316650:CDS | 35.0% | |
ATGGACAGAAACCCATTAAA+GGG | + | chr2_4:13828553-13828572 | Msa0316650:CDS | 35.0% | |
! | TTTTGAATGTGTGTGAACCT+TGG | - | chr2_4:13828588-13828607 | None:intergenic | 35.0% |
TTTAAATGTGCAGCTCATTG+TGG | - | chr2_4:13828829-13828848 | None:intergenic | 35.0% | |
! | TTTTCTACCTTTCTTCTTGC+TGG | - | chr2_4:13829075-13829094 | None:intergenic | 35.0% |
! | AAACCTAAATTTGTGATGGG+AGG | - | chr2_4:13829190-13829209 | None:intergenic | 35.0% |
GGCAAACCTAAATTTGTGAT+GGG | - | chr2_4:13829193-13829212 | None:intergenic | 35.0% | |
AGGCAAACCTAAATTTGTGA+TGG | - | chr2_4:13829194-13829213 | None:intergenic | 35.0% | |
AACTACAACATCACCACATT+AGG | - | chr2_4:13829214-13829233 | None:intergenic | 35.0% | |
GATGTTGTAGTTTGATCATC+CGG | + | chr2_4:13829222-13829241 | Msa0316650:intron | 35.0% | |
TGATTGATCAACGAGAACAT+GGG | - | chr2_4:13829260-13829279 | None:intergenic | 35.0% | |
TTGATTGATCAACGAGAACA+TGG | - | chr2_4:13829261-13829280 | None:intergenic | 35.0% | |
TCAATCAAACATCCCTTATC+CGG | + | chr2_4:13829273-13829292 | Msa0316650:intron | 35.0% | |
ATAGTTCCATTTCCGGATAA+GGG | - | chr2_4:13829288-13829307 | None:intergenic | 35.0% | |
AATAGTTCCATTTCCGGATA+AGG | - | chr2_4:13829289-13829308 | None:intergenic | 35.0% | |
ACCCAAGTTTCTAACATTTG+TGG | - | chr2_4:13829350-13829369 | None:intergenic | 35.0% | |
!! | AACTTGCCTTATTCTGAAAC+TGG | + | chr2_4:13829442-13829461 | Msa0316650:CDS | 35.0% |
TTCAAAAATGGTGGTAGGAG+TGG | - | chr2_4:13827657-13827676 | None:intergenic | 40.0% | |
AGGGAATGCTATGTTATTGG+CGG | - | chr2_4:13827720-13827739 | None:intergenic | 40.0% | |
AAGATGGTGTGGTACTTTGA+GGG | - | chr2_4:13827739-13827758 | None:intergenic | 40.0% | |
AAAGATGGTGTGGTACTTTG+AGG | - | chr2_4:13827740-13827759 | None:intergenic | 40.0% | |
!! | AAGAGAATGGGCTCTTTTCA+TGG | - | chr2_4:13827784-13827803 | None:intergenic | 40.0% |
! | TTTTGGCATACTAGTAGCTG+GGG | - | chr2_4:13827885-13827904 | None:intergenic | 40.0% |
!! | TTAATGTTGGTGATGTGGGT+GGG | - | chr2_4:13827983-13828002 | None:intergenic | 40.0% |
GTAATAGTATGGAGAGTGGT+GGG | - | chr2_4:13828046-13828065 | None:intergenic | 40.0% | |
TAGTGGCCGTATTAGTAATG+GGG | - | chr2_4:13828069-13828088 | None:intergenic | 40.0% | |
GTAGTGGCCGTATTAGTAAT+GGG | - | chr2_4:13828070-13828089 | None:intergenic | 40.0% | |
TGTAGTGGCCGTATTAGTAA+TGG | - | chr2_4:13828071-13828090 | None:intergenic | 40.0% | |
TGTTCGCAGTAGAGATGATA+GGG | - | chr2_4:13828114-13828133 | None:intergenic | 40.0% | |
TCAATGCATGCAACAGGTTT+GGG | - | chr2_4:13828253-13828272 | None:intergenic | 40.0% | |
ATCAATGCATGCAACAGGTT+TGG | - | chr2_4:13828254-13828273 | None:intergenic | 40.0% | |
GTGATATCAATGCATGCAAC+AGG | - | chr2_4:13828259-13828278 | None:intergenic | 40.0% | |
! | GATTTGCTTAGTGCAACTGA+TGG | - | chr2_4:13828313-13828332 | None:intergenic | 40.0% |
ATGAGCTTTCAAAAGACTCG+TGG | + | chr2_4:13828517-13828536 | Msa0316650:CDS | 40.0% | |
TGAGCTTTCAAAAGACTCGT+GGG | + | chr2_4:13828518-13828537 | Msa0316650:CDS | 40.0% | |
! | ATGTTTAAAACTCGAGGGTG+CGG | - | chr2_4:13828682-13828701 | None:intergenic | 40.0% |
GCTCATTGTGGATAATTGAG+TGG | - | chr2_4:13828817-13828836 | None:intergenic | 40.0% | |
AGATTGTCCAGCAAGAAGAA+AGG | + | chr2_4:13829065-13829084 | Msa0316650:CDS | 40.0% | |
GTACCTCCCATCACAAATTT+AGG | + | chr2_4:13829184-13829203 | Msa0316650:intron | 40.0% | |
AAACATCCCTTATCCGGAAA+TGG | + | chr2_4:13829279-13829298 | Msa0316650:intron | 40.0% | |
! | AGCAATGCTCAAGTTGTTGT+CGG | + | chr2_4:13829412-13829431 | Msa0316650:CDS | 40.0% |
TTCAAAAATGGTGGTAGGAG+TGG | - | chr2_4:13827657-13827676 | None:intergenic | 40.0% | |
AGGGAATGCTATGTTATTGG+CGG | - | chr2_4:13827720-13827739 | None:intergenic | 40.0% | |
AAGATGGTGTGGTACTTTGA+GGG | - | chr2_4:13827739-13827758 | None:intergenic | 40.0% | |
AAAGATGGTGTGGTACTTTG+AGG | - | chr2_4:13827740-13827759 | None:intergenic | 40.0% | |
!! | AAGAGAATGGGCTCTTTTCA+TGG | - | chr2_4:13827784-13827803 | None:intergenic | 40.0% |
! | TTTTGGCATACTAGTAGCTG+GGG | - | chr2_4:13827885-13827904 | None:intergenic | 40.0% |
!! | TTAATGTTGGTGATGTGGGT+GGG | - | chr2_4:13827983-13828002 | None:intergenic | 40.0% |
GTAATAGTATGGAGAGTGGT+GGG | - | chr2_4:13828046-13828065 | None:intergenic | 40.0% | |
TAGTGGCCGTATTAGTAATG+GGG | - | chr2_4:13828069-13828088 | None:intergenic | 40.0% | |
GTAGTGGCCGTATTAGTAAT+GGG | - | chr2_4:13828070-13828089 | None:intergenic | 40.0% | |
TGTAGTGGCCGTATTAGTAA+TGG | - | chr2_4:13828071-13828090 | None:intergenic | 40.0% | |
TGTTCGCAGTAGAGATGATA+GGG | - | chr2_4:13828114-13828133 | None:intergenic | 40.0% | |
TCAATGCATGCAACAGGTTT+GGG | - | chr2_4:13828253-13828272 | None:intergenic | 40.0% | |
ATCAATGCATGCAACAGGTT+TGG | - | chr2_4:13828254-13828273 | None:intergenic | 40.0% | |
GTGATATCAATGCATGCAAC+AGG | - | chr2_4:13828259-13828278 | None:intergenic | 40.0% | |
! | GATTTGCTTAGTGCAACTGA+TGG | - | chr2_4:13828313-13828332 | None:intergenic | 40.0% |
ATGAGCTTTCAAAAGACTCG+TGG | + | chr2_4:13828517-13828536 | Msa0316650:CDS | 40.0% | |
TGAGCTTTCAAAAGACTCGT+GGG | + | chr2_4:13828518-13828537 | Msa0316650:CDS | 40.0% | |
! | ATGTTTAAAACTCGAGGGTG+CGG | - | chr2_4:13828682-13828701 | None:intergenic | 40.0% |
GCTCATTGTGGATAATTGAG+TGG | - | chr2_4:13828817-13828836 | None:intergenic | 40.0% | |
AGATTGTCCAGCAAGAAGAA+AGG | + | chr2_4:13829065-13829084 | Msa0316650:CDS | 40.0% | |
GTACCTCCCATCACAAATTT+AGG | + | chr2_4:13829184-13829203 | Msa0316650:intron | 40.0% | |
AAACATCCCTTATCCGGAAA+TGG | + | chr2_4:13829279-13829298 | Msa0316650:intron | 40.0% | |
! | AGCAATGCTCAAGTTGTTGT+CGG | + | chr2_4:13829412-13829431 | Msa0316650:CDS | 40.0% |
GGGTCTTCAAAAATGGTGGT+AGG | - | chr2_4:13827662-13827681 | None:intergenic | 45.0% | |
AGGAGGGTCTTCAAAAATGG+TGG | - | chr2_4:13827666-13827685 | None:intergenic | 45.0% | |
TGGAGGAGGGTCTTCAAAAA+TGG | - | chr2_4:13827669-13827688 | None:intergenic | 45.0% | |
GTGGTTGTGGTGGTTTCAAT+CGG | - | chr2_4:13827695-13827714 | None:intergenic | 45.0% | |
GAATGCTATGTTATTGGCGG+TGG | - | chr2_4:13827717-13827736 | None:intergenic | 45.0% | |
!! | ATATTGTAGGTGGTGGAGGT+GGG | - | chr2_4:13827935-13827954 | None:intergenic | 45.0% |
!! | TAATGTTGGTGATGTGGGTG+GGG | - | chr2_4:13827982-13828001 | None:intergenic | 45.0% |
!! | GTTAATGTTGGTGATGTGGG+TGG | - | chr2_4:13827984-13828003 | None:intergenic | 45.0% |
GGTAATAGTATGGAGAGTGG+TGG | - | chr2_4:13828047-13828066 | None:intergenic | 45.0% | |
AGTGGCCGTATTAGTAATGG+GGG | - | chr2_4:13828068-13828087 | None:intergenic | 45.0% | |
GTTCGCAGTAGAGATGATAG+GGG | - | chr2_4:13828113-13828132 | None:intergenic | 45.0% | |
GTGTTCGCAGTAGAGATGAT+AGG | - | chr2_4:13828115-13828134 | None:intergenic | 45.0% | |
TATAGCACACCAATGCCGTT+TGG | - | chr2_4:13828488-13828507 | None:intergenic | 45.0% | |
TTTCAAAAGACTCGTGGGCA+TGG | + | chr2_4:13828523-13828542 | Msa0316650:CDS | 45.0% | |
GGATGTGGAGACCCTTTAAT+GGG | - | chr2_4:13828567-13828586 | None:intergenic | 45.0% | |
TGGATGTGGAGACCCTTTAA+TGG | - | chr2_4:13828568-13828587 | None:intergenic | 45.0% | |
TTAAAGGGTCTCCACATCCA+AGG | + | chr2_4:13828568-13828587 | Msa0316650:CDS | 45.0% | |
ATGTGTGTGAACCTTGGATG+TGG | - | chr2_4:13828582-13828601 | None:intergenic | 45.0% | |
!! | AGGGTGCGGTTGTTTGTTTT+AGG | - | chr2_4:13828668-13828687 | None:intergenic | 45.0% |
! | ACTTGAGCATTGCTACTCTG+TGG | - | chr2_4:13829406-13829425 | None:intergenic | 45.0% |
! | AGAATAGAGCACCACCATTG+AGG | - | chr2_4:13829555-13829574 | None:intergenic | 45.0% |
GGGTCTTCAAAAATGGTGGT+AGG | - | chr2_4:13827662-13827681 | None:intergenic | 45.0% | |
AGGAGGGTCTTCAAAAATGG+TGG | - | chr2_4:13827666-13827685 | None:intergenic | 45.0% | |
TGGAGGAGGGTCTTCAAAAA+TGG | - | chr2_4:13827669-13827688 | None:intergenic | 45.0% | |
GTGGTTGTGGTGGTTTCAAT+CGG | - | chr2_4:13827695-13827714 | None:intergenic | 45.0% | |
GAATGCTATGTTATTGGCGG+TGG | - | chr2_4:13827717-13827736 | None:intergenic | 45.0% | |
!! | ATATTGTAGGTGGTGGAGGT+GGG | - | chr2_4:13827935-13827954 | None:intergenic | 45.0% |
!! | TAATGTTGGTGATGTGGGTG+GGG | - | chr2_4:13827982-13828001 | None:intergenic | 45.0% |
!! | GTTAATGTTGGTGATGTGGG+TGG | - | chr2_4:13827984-13828003 | None:intergenic | 45.0% |
GGTAATAGTATGGAGAGTGG+TGG | - | chr2_4:13828047-13828066 | None:intergenic | 45.0% | |
AGTGGCCGTATTAGTAATGG+GGG | - | chr2_4:13828068-13828087 | None:intergenic | 45.0% | |
GTTCGCAGTAGAGATGATAG+GGG | - | chr2_4:13828113-13828132 | None:intergenic | 45.0% | |
GTGTTCGCAGTAGAGATGAT+AGG | - | chr2_4:13828115-13828134 | None:intergenic | 45.0% | |
TATAGCACACCAATGCCGTT+TGG | - | chr2_4:13828488-13828507 | None:intergenic | 45.0% | |
TTTCAAAAGACTCGTGGGCA+TGG | + | chr2_4:13828523-13828542 | Msa0316650:CDS | 45.0% | |
GGATGTGGAGACCCTTTAAT+GGG | - | chr2_4:13828567-13828586 | None:intergenic | 45.0% | |
TGGATGTGGAGACCCTTTAA+TGG | - | chr2_4:13828568-13828587 | None:intergenic | 45.0% | |
TTAAAGGGTCTCCACATCCA+AGG | + | chr2_4:13828568-13828587 | Msa0316650:CDS | 45.0% | |
ATGTGTGTGAACCTTGGATG+TGG | - | chr2_4:13828582-13828601 | None:intergenic | 45.0% | |
!! | AGGGTGCGGTTGTTTGTTTT+AGG | - | chr2_4:13828668-13828687 | None:intergenic | 45.0% |
! | ACTTGAGCATTGCTACTCTG+TGG | - | chr2_4:13829406-13829425 | None:intergenic | 45.0% |
! | AGAATAGAGCACCACCATTG+AGG | - | chr2_4:13829555-13829574 | None:intergenic | 45.0% |
!! | AAATAATATCAATTTATTAT+TGG | + | chr2_4:13828849-13828868 | Msa0316650:intron | 5.0% |
!! | AAATAATATCAATTTATTAT+TGG | + | chr2_4:13828849-13828868 | Msa0316650:intron | 5.0% |
GGTGGTAGGAGTGGTAAATG+TGG | - | chr2_4:13827648-13827667 | None:intergenic | 50.0% | |
TTTCAATCGGAGGTGGAGGA+GGG | - | chr2_4:13827682-13827701 | None:intergenic | 50.0% | |
GTTGTGGTGGTTTCAATCGG+AGG | - | chr2_4:13827692-13827711 | None:intergenic | 50.0% | |
TGCTATGTTATTGGCGGTGG+TGG | - | chr2_4:13827714-13827733 | None:intergenic | 50.0% | |
!! | TATTGTAGGTGGTGGAGGTG+GGG | - | chr2_4:13827934-13827953 | None:intergenic | 50.0% |
!! | GATATTGTAGGTGGTGGAGG+TGG | - | chr2_4:13827936-13827955 | None:intergenic | 50.0% |
! | TGGGATATTGTAGGTGGTGG+AGG | - | chr2_4:13827939-13827958 | None:intergenic | 50.0% |
GGATGGGATATTGTAGGTGG+TGG | - | chr2_4:13827942-13827961 | None:intergenic | 50.0% | |
GGGGGTAATAGTATGGAGAG+TGG | - | chr2_4:13828050-13828069 | None:intergenic | 50.0% | |
AGGGGTCGGGGTGATTATAT+TGG | - | chr2_4:13828095-13828114 | None:intergenic | 50.0% | |
AGTAGAGATGATAGGGGTCG+GGG | - | chr2_4:13828107-13828126 | None:intergenic | 50.0% | |
CAGTAGAGATGATAGGGGTC+GGG | - | chr2_4:13828108-13828127 | None:intergenic | 50.0% | |
GCAGTAGAGATGATAGGGGT+CGG | - | chr2_4:13828109-13828128 | None:intergenic | 50.0% | |
! | GTTGTTGTTCCGCGAGTGTT+AGG | - | chr2_4:13828195-13828214 | None:intergenic | 50.0% |
TCGTGGGCATGGAGGAAATA+TGG | + | chr2_4:13828534-13828553 | Msa0316650:CDS | 50.0% | |
TTACCCGTTGTCGAAGAAGC+TGG | + | chr2_4:13829319-13829338 | Msa0316650:CDS | 50.0% | |
TACCCGTTGTCGAAGAAGCT+GGG | + | chr2_4:13829320-13829339 | Msa0316650:CDS | 50.0% | |
TGACCCAGCTTCTTCGACAA+CGG | - | chr2_4:13829326-13829345 | None:intergenic | 50.0% | |
ATGGACTTCAACCGCCTCAA+TGG | + | chr2_4:13829538-13829557 | Msa0316650:CDS | 50.0% | |
! | ATAGAGCACCACCATTGAGG+CGG | - | chr2_4:13829552-13829571 | None:intergenic | 50.0% |
GGTGGTAGGAGTGGTAAATG+TGG | - | chr2_4:13827648-13827667 | None:intergenic | 50.0% | |
TTTCAATCGGAGGTGGAGGA+GGG | - | chr2_4:13827682-13827701 | None:intergenic | 50.0% | |
GTTGTGGTGGTTTCAATCGG+AGG | - | chr2_4:13827692-13827711 | None:intergenic | 50.0% | |
TGCTATGTTATTGGCGGTGG+TGG | - | chr2_4:13827714-13827733 | None:intergenic | 50.0% | |
!! | TATTGTAGGTGGTGGAGGTG+GGG | - | chr2_4:13827934-13827953 | None:intergenic | 50.0% |
!! | GATATTGTAGGTGGTGGAGG+TGG | - | chr2_4:13827936-13827955 | None:intergenic | 50.0% |
! | TGGGATATTGTAGGTGGTGG+AGG | - | chr2_4:13827939-13827958 | None:intergenic | 50.0% |
GGATGGGATATTGTAGGTGG+TGG | - | chr2_4:13827942-13827961 | None:intergenic | 50.0% | |
GGGGGTAATAGTATGGAGAG+TGG | - | chr2_4:13828050-13828069 | None:intergenic | 50.0% | |
AGGGGTCGGGGTGATTATAT+TGG | - | chr2_4:13828095-13828114 | None:intergenic | 50.0% | |
AGTAGAGATGATAGGGGTCG+GGG | - | chr2_4:13828107-13828126 | None:intergenic | 50.0% | |
CAGTAGAGATGATAGGGGTC+GGG | - | chr2_4:13828108-13828127 | None:intergenic | 50.0% | |
GCAGTAGAGATGATAGGGGT+CGG | - | chr2_4:13828109-13828128 | None:intergenic | 50.0% | |
! | GTTGTTGTTCCGCGAGTGTT+AGG | - | chr2_4:13828195-13828214 | None:intergenic | 50.0% |
TCGTGGGCATGGAGGAAATA+TGG | + | chr2_4:13828534-13828553 | Msa0316650:CDS | 50.0% | |
TTACCCGTTGTCGAAGAAGC+TGG | + | chr2_4:13829319-13829338 | Msa0316650:CDS | 50.0% | |
TACCCGTTGTCGAAGAAGCT+GGG | + | chr2_4:13829320-13829339 | Msa0316650:CDS | 50.0% | |
TGACCCAGCTTCTTCGACAA+CGG | - | chr2_4:13829326-13829345 | None:intergenic | 50.0% | |
ATGGACTTCAACCGCCTCAA+TGG | + | chr2_4:13829538-13829557 | Msa0316650:CDS | 50.0% | |
! | ATAGAGCACCACCATTGAGG+CGG | - | chr2_4:13829552-13829571 | None:intergenic | 50.0% |
GTTTCAATCGGAGGTGGAGG+AGG | - | chr2_4:13827683-13827702 | None:intergenic | 55.0% | |
GTGGTTTCAATCGGAGGTGG+AGG | - | chr2_4:13827686-13827705 | None:intergenic | 55.0% | |
GTGGTGGTTTCAATCGGAGG+TGG | - | chr2_4:13827689-13827708 | None:intergenic | 55.0% | |
! | GTTATTGGCGGTGGTGGTTG+TGG | - | chr2_4:13827708-13827727 | None:intergenic | 55.0% |
TAGCTGGGGTGGAGATAGTG+GGG | - | chr2_4:13827871-13827890 | None:intergenic | 55.0% | |
GTAGCTGGGGTGGAGATAGT+GGG | - | chr2_4:13827872-13827891 | None:intergenic | 55.0% | |
AGTAGCTGGGGTGGAGATAG+TGG | - | chr2_4:13827873-13827892 | None:intergenic | 55.0% | |
TGGCATACTAGTAGCTGGGG+TGG | - | chr2_4:13827882-13827901 | None:intergenic | 55.0% | |
!! | ATTGTAGGTGGTGGAGGTGG+GGG | - | chr2_4:13827933-13827952 | None:intergenic | 55.0% |
GGGGGATGGGATATTGTAGG+TGG | - | chr2_4:13827945-13827964 | None:intergenic | 55.0% | |
CAGGGGGGATGGGATATTGT+AGG | - | chr2_4:13827948-13827967 | None:intergenic | 55.0% | |
!! | GAGTAGTGATGGTGGGAGTG+TGG | - | chr2_4:13828024-13828043 | None:intergenic | 55.0% |
! | GTGGTGGGAGTAGTGATGGT+GGG | - | chr2_4:13828031-13828050 | None:intergenic | 55.0% |
! | AGTGGTGGGAGTAGTGATGG+TGG | - | chr2_4:13828032-13828051 | None:intergenic | 55.0% |
! | GAGAGTGGTGGGAGTAGTGA+TGG | - | chr2_4:13828035-13828054 | None:intergenic | 55.0% |
CAAAAGACTCGTGGGCATGG+AGG | + | chr2_4:13828526-13828545 | Msa0316650:CDS | 55.0% | |
! | ACATGGGCATTGCTGCTCTC+CGG | - | chr2_4:13829244-13829263 | None:intergenic | 55.0% |
GACCCAGCTTCTTCGACAAC+GGG | - | chr2_4:13829325-13829344 | None:intergenic | 55.0% | |
GACTTCAACCGCCTCAATGG+TGG | + | chr2_4:13829541-13829560 | Msa0316650:CDS | 55.0% | |
GTTTCAATCGGAGGTGGAGG+AGG | - | chr2_4:13827683-13827702 | None:intergenic | 55.0% | |
GTGGTTTCAATCGGAGGTGG+AGG | - | chr2_4:13827686-13827705 | None:intergenic | 55.0% | |
GTGGTGGTTTCAATCGGAGG+TGG | - | chr2_4:13827689-13827708 | None:intergenic | 55.0% | |
! | GTTATTGGCGGTGGTGGTTG+TGG | - | chr2_4:13827708-13827727 | None:intergenic | 55.0% |
TAGCTGGGGTGGAGATAGTG+GGG | - | chr2_4:13827871-13827890 | None:intergenic | 55.0% | |
GTAGCTGGGGTGGAGATAGT+GGG | - | chr2_4:13827872-13827891 | None:intergenic | 55.0% | |
AGTAGCTGGGGTGGAGATAG+TGG | - | chr2_4:13827873-13827892 | None:intergenic | 55.0% | |
TGGCATACTAGTAGCTGGGG+TGG | - | chr2_4:13827882-13827901 | None:intergenic | 55.0% | |
!! | ATTGTAGGTGGTGGAGGTGG+GGG | - | chr2_4:13827933-13827952 | None:intergenic | 55.0% |
GGGGGATGGGATATTGTAGG+TGG | - | chr2_4:13827945-13827964 | None:intergenic | 55.0% | |
CAGGGGGGATGGGATATTGT+AGG | - | chr2_4:13827948-13827967 | None:intergenic | 55.0% | |
!! | GAGTAGTGATGGTGGGAGTG+TGG | - | chr2_4:13828024-13828043 | None:intergenic | 55.0% |
! | GTGGTGGGAGTAGTGATGGT+GGG | - | chr2_4:13828031-13828050 | None:intergenic | 55.0% |
! | AGTGGTGGGAGTAGTGATGG+TGG | - | chr2_4:13828032-13828051 | None:intergenic | 55.0% |
! | GAGAGTGGTGGGAGTAGTGA+TGG | - | chr2_4:13828035-13828054 | None:intergenic | 55.0% |
CAAAAGACTCGTGGGCATGG+AGG | + | chr2_4:13828526-13828545 | Msa0316650:CDS | 55.0% | |
! | ACATGGGCATTGCTGCTCTC+CGG | - | chr2_4:13829244-13829263 | None:intergenic | 55.0% |
GACCCAGCTTCTTCGACAAC+GGG | - | chr2_4:13829325-13829344 | None:intergenic | 55.0% | |
GACTTCAACCGCCTCAATGG+TGG | + | chr2_4:13829541-13829560 | Msa0316650:CDS | 55.0% | |
! | ATTGGCGGTGGTGGTTGTGG+TGG | - | chr2_4:13827705-13827724 | None:intergenic | 60.0% |
!! | GGGGTGGAGATAGTGGGGAT+GGG | - | chr2_4:13827866-13827885 | None:intergenic | 60.0% |
!! | TGGGGTGGAGATAGTGGGGA+TGG | - | chr2_4:13827867-13827886 | None:intergenic | 60.0% |
! | GGGGGAAGATGTGGTGGTGA+TGG | - | chr2_4:13827915-13827934 | None:intergenic | 60.0% |
!! | GTTGGTGATGTGGGTGGGGA+TGG | - | chr2_4:13827978-13827997 | None:intergenic | 60.0% |
! | ATTGGCGGTGGTGGTTGTGG+TGG | - | chr2_4:13827705-13827724 | None:intergenic | 60.0% |
!! | GGGGTGGAGATAGTGGGGAT+GGG | - | chr2_4:13827866-13827885 | None:intergenic | 60.0% |
!! | TGGGGTGGAGATAGTGGGGA+TGG | - | chr2_4:13827867-13827886 | None:intergenic | 60.0% |
! | GGGGGAAGATGTGGTGGTGA+TGG | - | chr2_4:13827915-13827934 | None:intergenic | 60.0% |
!! | GTTGGTGATGTGGGTGGGGA+TGG | - | chr2_4:13827978-13827997 | None:intergenic | 60.0% |
GGAGGTGGGGGAAGATGTGG+TGG | - | chr2_4:13827921-13827940 | None:intergenic | 65.0% | |
GGTGGAGGTGGGGGAAGATG+TGG | - | chr2_4:13827924-13827943 | None:intergenic | 65.0% | |
!! | TGGTGGTGGTCAGGGGGGAT+GGG | - | chr2_4:13827958-13827977 | None:intergenic | 65.0% |
!! | ATGGTGGTGGTCAGGGGGGA+TGG | - | chr2_4:13827959-13827978 | None:intergenic | 65.0% |
!! | TGGGGATGGTGGTGGTCAGG+GGG | - | chr2_4:13827964-13827983 | None:intergenic | 65.0% |
!! | GTGGGGATGGTGGTGGTCAG+GGG | - | chr2_4:13827965-13827984 | None:intergenic | 65.0% |
!! | GGTGGGGATGGTGGTGGTCA+GGG | - | chr2_4:13827966-13827985 | None:intergenic | 65.0% |
! | GATGTGGGTGGGGATGGTGG+TGG | - | chr2_4:13827972-13827991 | None:intergenic | 65.0% |
GGTGATGTGGGTGGGGATGG+TGG | - | chr2_4:13827975-13827994 | None:intergenic | 65.0% | |
GGAGGTGGGGGAAGATGTGG+TGG | - | chr2_4:13827921-13827940 | None:intergenic | 65.0% | |
GGTGGAGGTGGGGGAAGATG+TGG | - | chr2_4:13827924-13827943 | None:intergenic | 65.0% | |
!! | TGGTGGTGGTCAGGGGGGAT+GGG | - | chr2_4:13827958-13827977 | None:intergenic | 65.0% |
!! | ATGGTGGTGGTCAGGGGGGA+TGG | - | chr2_4:13827959-13827978 | None:intergenic | 65.0% |
!! | TGGGGATGGTGGTGGTCAGG+GGG | - | chr2_4:13827964-13827983 | None:intergenic | 65.0% |
!! | GTGGGGATGGTGGTGGTCAG+GGG | - | chr2_4:13827965-13827984 | None:intergenic | 65.0% |
!! | GGTGGGGATGGTGGTGGTCA+GGG | - | chr2_4:13827966-13827985 | None:intergenic | 65.0% |
! | GATGTGGGTGGGGATGGTGG+TGG | - | chr2_4:13827972-13827991 | None:intergenic | 65.0% |
GGTGATGTGGGTGGGGATGG+TGG | - | chr2_4:13827975-13827994 | None:intergenic | 65.0% | |
!! | GGGGATGGTGGTGGTCAGGG+GGG | - | chr2_4:13827963-13827982 | None:intergenic | 70.0% |
!! | GGGTGGGGATGGTGGTGGTC+AGG | - | chr2_4:13827967-13827986 | None:intergenic | 70.0% |
!! | GGGGATGGTGGTGGTCAGGG+GGG | - | chr2_4:13827963-13827982 | None:intergenic | 70.0% |
!! | GGGTGGGGATGGTGGTGGTC+AGG | - | chr2_4:13827967-13827986 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 13827593 | 13829579 | 13827593 | ID=Msa0316650;Name=Msa0316650 |
chr2_4 | mRNA | 13827593 | 13829579 | 13827593 | ID=Msa0316650-mRNA-1;Parent=Msa0316650;Name=Msa0316650-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|4|0|393 |
chr2_4 | exon | 13827593 | 13828341 | 13827593 | ID=Msa0316650-mRNA-1:exon:5241;Parent=Msa0316650-mRNA-1 |
chr2_4 | exon | 13828473 | 13828589 | 13828473 | ID=Msa0316650-mRNA-1:exon:5242;Parent=Msa0316650-mRNA-1 |
chr2_4 | exon | 13829038 | 13829086 | 13829038 | ID=Msa0316650-mRNA-1:exon:5243;Parent=Msa0316650-mRNA-1 |
chr2_4 | exon | 13829313 | 13829579 | 13829313 | ID=Msa0316650-mRNA-1:exon:5244;Parent=Msa0316650-mRNA-1 |
chr2_4 | CDS | 13827593 | 13828341 | 13827593 | ID=Msa0316650-mRNA-1:cds;Parent=Msa0316650-mRNA-1 |
chr2_4 | CDS | 13828473 | 13828589 | 13828473 | ID=Msa0316650-mRNA-1:cds;Parent=Msa0316650-mRNA-1 |
chr2_4 | CDS | 13829038 | 13829086 | 13829038 | ID=Msa0316650-mRNA-1:cds;Parent=Msa0316650-mRNA-1 |
chr2_4 | CDS | 13829313 | 13829579 | 13829313 | ID=Msa0316650-mRNA-1:cds;Parent=Msa0316650-mRNA-1 |
Gene Sequence |
Protein sequence |