Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317350 | XP_013462948.1 | 94.987 | 379 | 18 | 1 | 1 | 379 | 1 | 378 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317350 | sp|Q39117|TGT2_ARATH | 37.838 | 259 | 131 | 5 | 106 | 354 | 252 | 490 | 2.25e-43 | 161 |
| Msa0317350 | sp|Q39117|TGT2_ARATH | 41.176 | 85 | 49 | 1 | 263 | 347 | 41 | 124 | 2.86e-13 | 74.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0317350 | TF | Trihelix |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317350 | MtrunA17_Chr2g0290511 | 94.987 | 379 | 18 | 1 | 1 | 379 | 1 | 378 | 0.0 | 652 |
| Msa0317350 | MtrunA17_Chr1g0201941 | 39.550 | 311 | 146 | 8 | 77 | 351 | 238 | 542 | 1.25e-54 | 190 |
| Msa0317350 | MtrunA17_Chr1g0201941 | 41.379 | 87 | 50 | 1 | 263 | 349 | 57 | 142 | 1.76e-15 | 78.2 |
| Msa0317350 | MtrunA17_Chr1g0201911 | 37.308 | 260 | 121 | 6 | 106 | 351 | 229 | 460 | 2.02e-43 | 158 |
| Msa0317350 | MtrunA17_Chr1g0201911 | 42.529 | 87 | 49 | 1 | 263 | 349 | 55 | 140 | 2.96e-15 | 77.4 |
| Msa0317350 | MtrunA17_Chr1g0190851 | 31.153 | 321 | 190 | 7 | 84 | 373 | 210 | 530 | 4.01e-35 | 135 |
| Msa0317350 | MtrunA17_Chr6g0463941 | 60.870 | 92 | 36 | 0 | 260 | 351 | 461 | 552 | 2.72e-33 | 130 |
| Msa0317350 | MtrunA17_Chr6g0463941 | 38.710 | 93 | 56 | 1 | 263 | 355 | 55 | 146 | 7.94e-16 | 79.0 |
| Msa0317350 | MtrunA17_Chr7g0273941 | 31.395 | 258 | 135 | 8 | 115 | 350 | 240 | 477 | 2.42e-29 | 118 |
| Msa0317350 | MtrunA17_Chr1g0198171 | 26.400 | 250 | 133 | 8 | 92 | 332 | 277 | 484 | 5.16e-16 | 79.3 |
| Msa0317350 | MtrunA17_Chr1g0198171 | 33.333 | 132 | 83 | 4 | 219 | 349 | 73 | 200 | 2.34e-13 | 71.2 |
| Msa0317350 | MtrunA17_Chr1g0179191 | 37.755 | 98 | 59 | 2 | 254 | 350 | 122 | 218 | 6.34e-14 | 73.2 |
| Msa0317350 | MtrunA17_Chr7g0265831 | 36.735 | 98 | 60 | 2 | 254 | 350 | 106 | 202 | 4.49e-13 | 70.5 |
| Msa0317350 | MtrunA17_Chr5g0409071 | 31.683 | 101 | 64 | 2 | 259 | 357 | 41 | 138 | 5.52e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0317350 | AT5G47660.1 | 41.365 | 249 | 121 | 3 | 106 | 354 | 169 | 392 | 2.65e-51 | 176 |
| Msa0317350 | AT1G76890.2 | 37.838 | 259 | 131 | 5 | 106 | 354 | 252 | 490 | 2.28e-44 | 161 |
| Msa0317350 | AT1G76890.2 | 41.176 | 85 | 49 | 1 | 263 | 347 | 41 | 124 | 2.91e-14 | 74.7 |
| Msa0317350 | AT5G28300.1 | 35.361 | 263 | 138 | 8 | 115 | 350 | 299 | 556 | 2.84e-37 | 142 |
| Msa0317350 | AT1G76880.1 | 53.398 | 103 | 44 | 1 | 256 | 358 | 401 | 499 | 5.57e-31 | 124 |
| Msa0317350 | AT1G76880.1 | 41.379 | 87 | 50 | 1 | 263 | 349 | 61 | 146 | 2.02e-14 | 75.1 |
| Msa0317350 | AT1G33240.3 | 54.839 | 93 | 42 | 0 | 263 | 355 | 435 | 527 | 5.49e-29 | 118 |
| Msa0317350 | AT1G33240.3 | 39.080 | 87 | 52 | 1 | 263 | 349 | 62 | 147 | 2.23e-13 | 72.0 |
| Msa0317350 | AT1G33240.1 | 54.839 | 93 | 42 | 0 | 263 | 355 | 435 | 527 | 7.20e-29 | 118 |
| Msa0317350 | AT1G33240.1 | 39.080 | 87 | 52 | 1 | 263 | 349 | 62 | 147 | 2.16e-13 | 72.0 |
| Msa0317350 | AT1G33240.2 | 54.839 | 93 | 42 | 0 | 263 | 355 | 396 | 488 | 1.05e-28 | 118 |
| Msa0317350 | AT5G03680.1 | 28.881 | 277 | 163 | 7 | 76 | 343 | 255 | 506 | 2.14e-18 | 87.4 |
| Msa0317350 | AT5G03680.1 | 41.573 | 89 | 50 | 2 | 263 | 350 | 119 | 206 | 1.70e-14 | 75.5 |
| Msa0317350 | AT3G10000.1 | 35.433 | 127 | 77 | 3 | 225 | 350 | 54 | 176 | 1.91e-16 | 81.3 |
| Msa0317350 | AT3G10000.2 | 33.333 | 126 | 71 | 3 | 225 | 350 | 54 | 166 | 1.36e-13 | 72.4 |
Find 150 sgRNAs with CRISPR-Local
Find 410 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGAGGGTTACTGCCTTAC+TGG | 0.202198 | 2_4:+15034376 | None:intergenic |
| AGACGGGTCCTCGACCTTTA+TGG | 0.221031 | 2_4:+15034131 | None:intergenic |
| GTTACTGCCTTACTGGTTAC+TGG | 0.258600 | 2_4:+15034383 | None:intergenic |
| TACAAGAACATGCAAAATTT+AGG | 0.284429 | 2_4:+15032221 | None:intergenic |
| ATCGCTGATTCAGAAACTAT+TGG | 0.316999 | 2_4:-15032920 | Msa0317350:CDS |
| TTGCCCTTACTTTGACGAAT+TGG | 0.318055 | 2_4:-15032446 | Msa0317350:CDS |
| AAATTTGATAATCATAAATA+TGG | 0.319593 | 2_4:-15032330 | Msa0317350:exon |
| GGAGATAGCTGGAGCATTGC+AGG | 0.341688 | 2_4:-15032581 | Msa0317350:CDS |
| TGGGATCGAAAGGATCAATA+TGG | 0.344397 | 2_4:-15032606 | Msa0317350:CDS |
| TTGGACAATCTGTATAGAAA+TGG | 0.356199 | 2_4:-15032427 | Msa0317350:CDS |
| GGAACACAAGTTCGGTCATA+TGG | 0.359379 | 2_4:-15032626 | Msa0317350:CDS |
| CGGCCCCATGTACTGGATTA+AGG | 0.361071 | 2_4:+15032753 | None:intergenic |
| CGAAGAAGTGCAAGGAGAAA+TGG | 0.367920 | 2_4:-15032537 | Msa0317350:CDS |
| CCTCAGCCGGCCCCATGTAC+TGG | 0.380046 | 2_4:+15032746 | None:intergenic |
| GGGAAACCAGGAGGAGGAGG+AGG | 0.384212 | 2_4:+15034180 | None:intergenic |
| TCGCTGATTCAGAAACTATT+GGG | 0.386057 | 2_4:-15032919 | Msa0317350:CDS |
| CTTATTCCGCTTCCTTCTGC+TGG | 0.387343 | 2_4:+15032874 | None:intergenic |
| TCTGCTAATACTAAAGAATT+CGG | 0.401638 | 2_4:-15033177 | Msa0317350:CDS |
| TTCCCTTATGGAAACATTGT+TGG | 0.404001 | 2_4:+15032369 | None:intergenic |
| GGTAGAGGGGTGTGGTGAGA+AGG | 0.405204 | 2_4:+15034159 | None:intergenic |
| GTCGAGGACCCGTCTCGATC+CGG | 0.413921 | 2_4:-15034123 | Msa0317350:CDS |
| CCCTCTACCACCTTCCATAA+AGG | 0.418335 | 2_4:-15034145 | Msa0317350:CDS |
| AGGTCGCCGGAGTCGGGAAA+TGG | 0.420361 | 2_4:+15034279 | None:intergenic |
| AGCTGGAGCATTGCAGGGCA+TGG | 0.423836 | 2_4:-15032575 | Msa0317350:CDS |
| AAAACATCAATAAGTACTAT+AGG | 0.424007 | 2_4:-15032513 | Msa0317350:CDS |
| GAAGGGAAACCAGGAGGAGG+AGG | 0.425874 | 2_4:+15034177 | None:intergenic |
| TTGTTATTGCTCACCTCAGC+CGG | 0.426631 | 2_4:+15032733 | None:intergenic |
| GCGATCCAAGTAACAGTAGA+TGG | 0.427115 | 2_4:-15032693 | Msa0317350:CDS |
| TCATCATTTCAGCTCGTCTT+CGG | 0.431474 | 2_4:-15033217 | Msa0317350:intron |
| CGACCCCACGTTGTGGGTCA+AGG | 0.431970 | 2_4:+15032807 | None:intergenic |
| TTGTCCAATTCGTCAAAGTA+AGG | 0.432653 | 2_4:+15032442 | None:intergenic |
| AATGGGTCCTTGGAGAGAAA+TGG | 0.436187 | 2_4:-15032409 | Msa0317350:CDS |
| GGGGATTGTGGTGGTTGGAG+AGG | 0.440819 | 2_4:+15034238 | None:intergenic |
| GCTGTCCATGGTTGTGGTAA+TGG | 0.442011 | 2_4:+15034332 | None:intergenic |
| AGAGCAGATGCATAAAGAAT+TGG | 0.442580 | 2_4:-15033073 | Msa0317350:CDS |
| ATACCAACAATGTTTCCATA+AGG | 0.443747 | 2_4:-15032372 | Msa0317350:CDS |
| AGCATGGAAGCGCGAGGAGA+TGG | 0.446602 | 2_4:-15033004 | Msa0317350:CDS |
| CCTAGCCTTAATCCAGTACA+TGG | 0.450131 | 2_4:-15032758 | Msa0317350:CDS |
| TTGCAGCAAATTTGGTAAAG+AGG | 0.450584 | 2_4:-15033110 | Msa0317350:CDS |
| ACCTTTATGGAAGGTGGTAG+AGG | 0.453928 | 2_4:+15034144 | None:intergenic |
| AGCGCTTGTACTTCAACATC+TGG | 0.456538 | 2_4:+15032670 | None:intergenic |
| GTTTCTGAATCAGCGATATG+AGG | 0.456889 | 2_4:+15032926 | None:intergenic |
| AAGATAAGGTCGCCGGAGTC+GGG | 0.457626 | 2_4:+15034273 | None:intergenic |
| AGGAGGAGGGATGGACCTGA+TGG | 0.458333 | 2_4:+15034203 | None:intergenic |
| GAGAAAGAGTTCGAGAAAGC+TGG | 0.464906 | 2_4:-15033139 | Msa0317350:CDS |
| TGTTTCCATAAGGGAAGAAA+AGG | 0.473178 | 2_4:-15032362 | Msa0317350:CDS |
| GACCCGTCTCGATCCGGGTC+GGG | 0.479636 | 2_4:-15034117 | Msa0317350:CDS |
| TGGACAATCTGTATAGAAAT+GGG | 0.482755 | 2_4:-15032426 | Msa0317350:CDS |
| GTGTGGTGAGAAGGGAAACC+AGG | 0.486892 | 2_4:+15034168 | None:intergenic |
| CCGCTTCCTTCTGCTGGTGG+AGG | 0.487836 | 2_4:+15032880 | None:intergenic |
| CCAGTACATGGGGCCGGCTG+AGG | 0.488463 | 2_4:-15032746 | Msa0317350:CDS |
| GTTCATGCTGTCCATGGTTG+TGG | 0.489455 | 2_4:+15034326 | None:intergenic |
| GTAGAGGGGTGTGGTGAGAA+GGG | 0.489814 | 2_4:+15034160 | None:intergenic |
| TCGAGGACCCGTCTCGATCC+GGG | 0.493085 | 2_4:-15034122 | Msa0317350:CDS |
| GACCCGACCCGGATCGAGAC+GGG | 0.496300 | 2_4:+15034115 | None:intergenic |
| TCTGGCCATCTACTGTTACT+TGG | 0.497676 | 2_4:+15032688 | None:intergenic |
| GAAGATAAGGTCGCCGGAGT+CGG | 0.499156 | 2_4:+15034272 | None:intergenic |
| TGGAAGGTGGTAGAGGGGTG+TGG | 0.500655 | 2_4:+15034151 | None:intergenic |
| CCACAACGTGGGGTCGGCTG+AGG | 0.501288 | 2_4:-15032800 | Msa0317350:CDS |
| CTCAGCCGACCCCACGTTGT+GGG | 0.501316 | 2_4:+15032801 | None:intergenic |
| TCAATATGGGAGGAGATAGC+TGG | 0.501950 | 2_4:-15032592 | Msa0317350:CDS |
| TGCATTTCCATTTCTCTCCA+AGG | 0.502699 | 2_4:+15032402 | None:intergenic |
| AAGAGAAGAGGATGAAGTTG+AGG | 0.502881 | 2_4:-15032854 | Msa0317350:CDS |
| TCTGTATAGAAATGGGTCCT+TGG | 0.503578 | 2_4:-15032419 | Msa0317350:CDS |
| GATTGTGGTGGTTGGAGAGG+AGG | 0.505297 | 2_4:+15034241 | None:intergenic |
| GCAGATGCATAAAGAATTGG+TGG | 0.506304 | 2_4:-15033070 | Msa0317350:CDS |
| TTGCCCCTTTGTCAAGAACC+CGG | 0.506347 | 2_4:-15034084 | Msa0317350:CDS |
| TTACCCGGGTTCTTGACAAA+GGG | 0.507083 | 2_4:+15034080 | None:intergenic |
| GGAGGAGGGATGGACCTGAT+GGG | 0.508730 | 2_4:+15034204 | None:intergenic |
| GGAGGCCGGCGGCGAAGATA+AGG | 0.508923 | 2_4:+15034259 | None:intergenic |
| TACCAACAATGTTTCCATAA+GGG | 0.510070 | 2_4:-15032371 | Msa0317350:CDS |
| ATTCCGCTTCCTTCTGCTGG+TGG | 0.513116 | 2_4:+15032877 | None:intergenic |
| GTGGTGGTTGGAGAGGAGGC+CGG | 0.515979 | 2_4:+15034245 | None:intergenic |
| CAGTTGGGAGCGGCAAGAAA+CGG | 0.517486 | 2_4:-15032486 | Msa0317350:CDS |
| ATGAAACAAACGGCGGCGTG+AGG | 0.519726 | 2_4:+15034360 | None:intergenic |
| GGATAAAGAGAGAAGAAGCA+TGG | 0.520205 | 2_4:-15033020 | Msa0317350:CDS |
| ACCGCATTGGAACACAAGTT+CGG | 0.524498 | 2_4:-15032634 | Msa0317350:CDS |
| GAAGAAGTGCAAGGAGAAAT+GGG | 0.526951 | 2_4:-15032536 | Msa0317350:CDS |
| AGTACTATAGGAGGACAGTT+GGG | 0.527630 | 2_4:-15032501 | Msa0317350:CDS |
| AATGATTGAGAGGATGGAAA+AGG | 0.532492 | 2_4:-15033046 | Msa0317350:CDS |
| CCCACGTTGTGGGTCAAGGG+TGG | 0.532882 | 2_4:+15032811 | None:intergenic |
| CATAAGGGAAGAAAAGGAGC+AGG | 0.532990 | 2_4:-15032356 | Msa0317350:CDS |
| CCTCAGCCGACCCCACGTTG+TGG | 0.533841 | 2_4:+15032800 | None:intergenic |
| TGAAACAAACGGCGGCGTGA+GGG | 0.536561 | 2_4:+15034361 | None:intergenic |
| GGTGGAAATGATTGAGAGGA+TGG | 0.536865 | 2_4:-15033052 | Msa0317350:CDS |
| GCTGGAGCATTGCAGGGCAT+GGG | 0.538046 | 2_4:-15032574 | Msa0317350:CDS |
| CAGCTCGTCTTCGGATGACG+TGG | 0.539019 | 2_4:-15033208 | Msa0317350:CDS |
| CCTTTATGGAAGGTGGTAGA+GGG | 0.540722 | 2_4:+15034145 | None:intergenic |
| GAGGAGGGATGGACCTGATG+GGG | 0.543104 | 2_4:+15034205 | None:intergenic |
| GAACACAAGTTCGGTCATAT+GGG | 0.545310 | 2_4:-15032625 | Msa0317350:CDS |
| CCATGTACTGGATTAAGGCT+AGG | 0.546605 | 2_4:+15032758 | None:intergenic |
| GGAGATGGAGAGAATTAAGC+AGG | 0.547111 | 2_4:-15032989 | Msa0317350:CDS |
| GGGATCGAAAGGATCAATAT+GGG | 0.547722 | 2_4:-15032605 | Msa0317350:CDS |
| GTTGCTCCATTTCCCGACTC+CGG | 0.549274 | 2_4:-15034285 | Msa0317350:CDS |
| CCACGTTGTGGGTCAAGGGT+GGG | 0.550717 | 2_4:+15032812 | None:intergenic |
| GACCCCACGTTGTGGGTCAA+GGG | 0.551673 | 2_4:+15032808 | None:intergenic |
| CTGGATTAAGGCTAGGCTGT+TGG | 0.556448 | 2_4:+15032765 | None:intergenic |
| AAGTACTATAGGAGGACAGT+TGG | 0.558326 | 2_4:-15032502 | Msa0317350:CDS |
| TTCGGTCATATGGGATCGAA+AGG | 0.560164 | 2_4:-15032616 | Msa0317350:CDS |
| CATAGCAGTAAGAACCGCAT+TGG | 0.560429 | 2_4:-15032647 | Msa0317350:CDS |
| CCTCCACCAGCAGAAGGAAG+CGG | 0.560638 | 2_4:-15032880 | Msa0317350:CDS |
| GGACCCGTCTCGATCCGGGT+CGG | 0.561874 | 2_4:-15034118 | Msa0317350:CDS |
| TGAGAAGGGAAACCAGGAGG+AGG | 0.562570 | 2_4:+15034174 | None:intergenic |
| CAAAGAAGAATGACCCGACC+CGG | 0.563112 | 2_4:+15034104 | None:intergenic |
| GAGGAGGTTCATGCTGTCCA+TGG | 0.563553 | 2_4:+15034320 | None:intergenic |
| CTTGACCCACAACGTGGGGT+CGG | 0.569379 | 2_4:-15032806 | Msa0317350:CDS |
| GGCGACCTTATCTTCGCCGC+CGG | 0.577427 | 2_4:-15034264 | Msa0317350:CDS |
| TTACCAGCCAGTAACCAGTA+AGG | 0.581049 | 2_4:-15034390 | None:intergenic |
| CTTACCCGGGTTCTTGACAA+AGG | 0.581461 | 2_4:+15034079 | None:intergenic |
| TCCTCGACCTTTATGGAAGG+TGG | 0.582785 | 2_4:+15034138 | None:intergenic |
| TTTCTGAATCAGCGATATGA+GGG | 0.586770 | 2_4:+15032927 | None:intergenic |
| TGCCCCTTTGTCAAGAACCC+GGG | 0.588206 | 2_4:-15034083 | Msa0317350:intron |
| AGCTCGTCTTCGGATGACGT+GGG | 0.593056 | 2_4:-15033207 | Msa0317350:CDS |
| AGAACATGCAAAATTTAGGA+TGG | 0.593980 | 2_4:+15032225 | None:intergenic |
| CAGATTCCTCCACCAGCAGA+AGG | 0.594230 | 2_4:-15032886 | Msa0317350:CDS |
| CCCACCCTTGACCCACAACG+TGG | 0.596089 | 2_4:-15032812 | Msa0317350:CDS |
| CTTAATCCAGTACATGGGGC+CGG | 0.598105 | 2_4:-15032752 | Msa0317350:CDS |
| CACCCTTGACCCACAACGTG+GGG | 0.600798 | 2_4:-15032810 | Msa0317350:CDS |
| AATTCGGCTCAAGAAAGAGA+AGG | 0.601809 | 2_4:-15033161 | Msa0317350:CDS |
| CCACCCTTGACCCACAACGT+GGG | 0.601931 | 2_4:-15032811 | Msa0317350:CDS |
| GGCGGCGAAGATAAGGTCGC+CGG | 0.602029 | 2_4:+15034266 | None:intergenic |
| TGTCCAATTCGTCAAAGTAA+GGG | 0.602664 | 2_4:+15032443 | None:intergenic |
| GAGCAACATGGTCGGAGGCG+AGG | 0.603241 | 2_4:+15034301 | None:intergenic |
| TGACCCGACCCGGATCGAGA+CGG | 0.603647 | 2_4:+15034114 | None:intergenic |
| TTGAGAGGATGGAAAAGGAA+AGG | 0.604583 | 2_4:-15033041 | Msa0317350:CDS |
| ACCACCTTCCATAAAGGTCG+AGG | 0.606661 | 2_4:-15034139 | Msa0317350:CDS |
| TATAGGAGGACAGTTGGGAG+CGG | 0.607290 | 2_4:-15032496 | Msa0317350:CDS |
| CTAGCCTTAATCCAGTACAT+GGG | 0.619110 | 2_4:-15032757 | Msa0317350:CDS |
| CAACATGGTCGGAGGCGAGG+AGG | 0.621911 | 2_4:+15034304 | None:intergenic |
| ACATCAATAAGTACTATAGG+AGG | 0.623811 | 2_4:-15032510 | Msa0317350:CDS |
| GAGATAGCTGGAGCATTGCA+GGG | 0.625252 | 2_4:-15032580 | Msa0317350:CDS |
| GTGGTTGGAGAGGAGGCCGG+CGG | 0.625523 | 2_4:+15034248 | None:intergenic |
| GCAGGACGAAGAAGCTAGAG+CGG | 0.631131 | 2_4:-15032971 | Msa0317350:CDS |
| AATTGGTGGAAATGATTGAG+AGG | 0.633368 | 2_4:-15033056 | Msa0317350:CDS |
| AAATGGAGCAACATGGTCGG+AGG | 0.635563 | 2_4:+15034296 | None:intergenic |
| GGGAAATGGAGCAACATGGT+CGG | 0.636053 | 2_4:+15034293 | None:intergenic |
| AGAAGAAGCATGGAAGCGCG+AGG | 0.638350 | 2_4:-15033010 | Msa0317350:CDS |
| TCGTTCTGCGAAGAAGTGCA+AGG | 0.647147 | 2_4:-15032545 | Msa0317350:CDS |
| AGGAAGCGGAATAAGAGAAG+AGG | 0.647234 | 2_4:-15032866 | Msa0317350:CDS |
| AAGAAGCTAGAGCGGCTGAG+AGG | 0.648990 | 2_4:-15032963 | Msa0317350:CDS |
| GGGTCCTCGACCTTTATGGA+AGG | 0.655244 | 2_4:+15034135 | None:intergenic |
| CTTTATGGAAGGTGGTAGAG+GGG | 0.657356 | 2_4:+15034146 | None:intergenic |
| AGTCGGGAAATGGAGCAACA+TGG | 0.658925 | 2_4:+15034289 | None:intergenic |
| AAATTTGGTAAAGAGGATGA+CGG | 0.659081 | 2_4:-15033103 | Msa0317350:CDS |
| ACCGAACTTGTGTTCCAATG+CGG | 0.661234 | 2_4:+15032633 | None:intergenic |
| TACCCGGGTTCTTGACAAAG+GGG | 0.666977 | 2_4:+15034081 | None:intergenic |
| ATCGAAAGGATCAATATGGG+AGG | 0.667283 | 2_4:-15032602 | Msa0317350:CDS |
| TGGTGAGAAGGGAAACCAGG+AGG | 0.688570 | 2_4:+15034171 | None:intergenic |
| TAGCCTTAATCCAGTACATG+GGG | 0.692795 | 2_4:-15032756 | Msa0317350:CDS |
| ATAAGGGAAGAAAAGGAGCA+GGG | 0.692895 | 2_4:-15032355 | Msa0317350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTTATCTTTTTTATTT+TGG | - | chr2_4:15032577-15032596 | Msa0317350:CDS | 10.0% |
| !!! | AAATTTGATAATCATAAATA+TGG | - | chr2_4:15034246-15034265 | Msa0317350:CDS | 10.0% |
| !!! | TCTTTTTATCTTTTTTATTT+TGG | - | chr2_4:15032577-15032596 | Msa0317350:CDS | 10.0% |
| !!! | AAATTTGATAATCATAAATA+TGG | - | chr2_4:15034246-15034265 | Msa0317350:CDS | 10.0% |
| !!! | ATTGTAAATGTTTTGTTTTA+TGG | - | chr2_4:15032909-15032928 | Msa0317350:CDS | 15.0% |
| !!! | ATTGTAAATGTTTTGTTTTA+TGG | - | chr2_4:15032909-15032928 | Msa0317350:CDS | 15.0% |
| !! | AATGGTAAAAATGAAACAAA+CGG | + | chr2_4:15032229-15032248 | None:intergenic | 20.0% |
| !!! | TATTTTGGTTGAAAATTCAA+TGG | - | chr2_4:15032592-15032611 | Msa0317350:CDS | 20.0% |
| !! | AATTCAATGGTTAAACAATT+AGG | - | chr2_4:15032605-15032624 | Msa0317350:CDS | 20.0% |
| !!! | ACAATTTTTGTCAATTTTCA+TGG | - | chr2_4:15032834-15032853 | Msa0317350:CDS | 20.0% |
| !! | ATATATGCTACATAAAAACT+TGG | + | chr2_4:15033165-15033184 | None:intergenic | 20.0% |
| !! | AGCATATATAATAGTTCATA+AGG | - | chr2_4:15033176-15033195 | Msa0317350:CDS | 20.0% |
| !! | AAAACATCAATAAGTACTAT+AGG | - | chr2_4:15034063-15034082 | Msa0317350:intron | 20.0% |
| !!! | TACCAATTTTTTTACTGAAT+TGG | - | chr2_4:15034376-15034395 | Msa0317350:five_prime_UTR | 20.0% |
| !! | AATGGTAAAAATGAAACAAA+CGG | + | chr2_4:15032229-15032248 | None:intergenic | 20.0% |
| !!! | TATTTTGGTTGAAAATTCAA+TGG | - | chr2_4:15032592-15032611 | Msa0317350:CDS | 20.0% |
| !! | AATTCAATGGTTAAACAATT+AGG | - | chr2_4:15032605-15032624 | Msa0317350:CDS | 20.0% |
| !!! | ACAATTTTTGTCAATTTTCA+TGG | - | chr2_4:15032834-15032853 | Msa0317350:CDS | 20.0% |
| !! | ATATATGCTACATAAAAACT+TGG | + | chr2_4:15033165-15033184 | None:intergenic | 20.0% |
| !! | AGCATATATAATAGTTCATA+AGG | - | chr2_4:15033176-15033195 | Msa0317350:CDS | 20.0% |
| !! | AAAACATCAATAAGTACTAT+AGG | - | chr2_4:15034063-15034082 | Msa0317350:intron | 20.0% |
| !!! | TACCAATTTTTTTACTGAAT+TGG | - | chr2_4:15034376-15034395 | Msa0317350:five_prime_UTR | 20.0% |
| ! | GTAAAAACTTTACAAGCTAA+GGG | + | chr2_4:15032535-15032554 | None:intergenic | 25.0% |
| ! | AGTAAAAACTTTACAAGCTA+AGG | + | chr2_4:15032536-15032555 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAGAATCATACA+AGG | - | chr2_4:15032944-15032963 | Msa0317350:CDS | 25.0% |
| !!! | AAGGTATTGTAGTATGAATT+TGG | - | chr2_4:15032963-15032982 | Msa0317350:CDS | 25.0% |
| ! | TTGTAGTATGAATTTGGATT+TGG | - | chr2_4:15032969-15032988 | Msa0317350:CDS | 25.0% |
| !! | ATTTGAATTTTCGATCATTG+TGG | - | chr2_4:15032992-15033011 | Msa0317350:CDS | 25.0% |
| ! | TTTACGTTAGTCAAACAATT+AGG | - | chr2_4:15033024-15033043 | Msa0317350:CDS | 25.0% |
| ! | ATTCGAATCATTATCGTAAA+AGG | + | chr2_4:15033331-15033350 | None:intergenic | 25.0% |
| ! | TCTGCTAATACTAAAGAATT+CGG | - | chr2_4:15033399-15033418 | Msa0317350:intron | 25.0% |
| ! | AACAAAAAACATTTCAACAG+CGG | - | chr2_4:15033861-15033880 | Msa0317350:intron | 25.0% |
| !!! | GAGTACTGAAAATTTTACAT+AGG | + | chr2_4:15034272-15034291 | None:intergenic | 25.0% |
| ! | TCTAAAAATGTTGCTCATTA+AGG | + | chr2_4:15034324-15034343 | None:intergenic | 25.0% |
| ! | TACAAGAACATGCAAAATTT+AGG | + | chr2_4:15034358-15034377 | None:intergenic | 25.0% |
| ! | GACCAATTCAGTAAAAAAAT+TGG | + | chr2_4:15034381-15034400 | None:intergenic | 25.0% |
| ! | GTAAAAACTTTACAAGCTAA+GGG | + | chr2_4:15032535-15032554 | None:intergenic | 25.0% |
| ! | AGTAAAAACTTTACAAGCTA+AGG | + | chr2_4:15032536-15032555 | None:intergenic | 25.0% |
| ! | GAAGAAAAAAGAATCATACA+AGG | - | chr2_4:15032944-15032963 | Msa0317350:CDS | 25.0% |
| !!! | AAGGTATTGTAGTATGAATT+TGG | - | chr2_4:15032963-15032982 | Msa0317350:CDS | 25.0% |
| ! | TTGTAGTATGAATTTGGATT+TGG | - | chr2_4:15032969-15032988 | Msa0317350:CDS | 25.0% |
| !! | ATTTGAATTTTCGATCATTG+TGG | - | chr2_4:15032992-15033011 | Msa0317350:CDS | 25.0% |
| ! | TTTACGTTAGTCAAACAATT+AGG | - | chr2_4:15033024-15033043 | Msa0317350:CDS | 25.0% |
| ! | ATTCGAATCATTATCGTAAA+AGG | + | chr2_4:15033331-15033350 | None:intergenic | 25.0% |
| ! | TCTGCTAATACTAAAGAATT+CGG | - | chr2_4:15033399-15033418 | Msa0317350:intron | 25.0% |
| ! | AACAAAAAACATTTCAACAG+CGG | - | chr2_4:15033861-15033880 | Msa0317350:intron | 25.0% |
| !!! | GAGTACTGAAAATTTTACAT+AGG | + | chr2_4:15034272-15034291 | None:intergenic | 25.0% |
| ! | TCTAAAAATGTTGCTCATTA+AGG | + | chr2_4:15034324-15034343 | None:intergenic | 25.0% |
| ! | TACAAGAACATGCAAAATTT+AGG | + | chr2_4:15034358-15034377 | None:intergenic | 25.0% |
| ! | GACCAATTCAGTAAAAAAAT+TGG | + | chr2_4:15034381-15034400 | None:intergenic | 25.0% |
| TTGTTTGACTAACGTAAATG+CGG | + | chr2_4:15033022-15033041 | None:intergenic | 30.0% | |
| AGTCAAACAATTAGGACTAT+TGG | - | chr2_4:15033032-15033051 | Msa0317350:CDS | 30.0% | |
| GTAAATGTAGAATTTCCTGA+TGG | - | chr2_4:15033097-15033116 | Msa0317350:CDS | 30.0% | |
| AAATTTGGTAAAGAGGATGA+CGG | - | chr2_4:15033473-15033492 | Msa0317350:intron | 30.0% | |
| ACATCAATAAGTACTATAGG+AGG | - | chr2_4:15034066-15034085 | Msa0317350:intron | 30.0% | |
| TTGGACAATCTGTATAGAAA+TGG | - | chr2_4:15034149-15034168 | Msa0317350:CDS | 30.0% | |
| TGGACAATCTGTATAGAAAT+GGG | - | chr2_4:15034150-15034169 | Msa0317350:CDS | 30.0% | |
| ATACCAACAATGTTTCCATA+AGG | - | chr2_4:15034204-15034223 | Msa0317350:CDS | 30.0% | |
| TACCAACAATGTTTCCATAA+GGG | - | chr2_4:15034205-15034224 | Msa0317350:CDS | 30.0% | |
| AGAACATGCAAAATTTAGGA+TGG | + | chr2_4:15034354-15034373 | None:intergenic | 30.0% | |
| TTGTTTGACTAACGTAAATG+CGG | + | chr2_4:15033022-15033041 | None:intergenic | 30.0% | |
| AGTCAAACAATTAGGACTAT+TGG | - | chr2_4:15033032-15033051 | Msa0317350:CDS | 30.0% | |
| GTAAATGTAGAATTTCCTGA+TGG | - | chr2_4:15033097-15033116 | Msa0317350:CDS | 30.0% | |
| AAATTTGGTAAAGAGGATGA+CGG | - | chr2_4:15033473-15033492 | Msa0317350:intron | 30.0% | |
| ACATCAATAAGTACTATAGG+AGG | - | chr2_4:15034066-15034085 | Msa0317350:intron | 30.0% | |
| TTGGACAATCTGTATAGAAA+TGG | - | chr2_4:15034149-15034168 | Msa0317350:CDS | 30.0% | |
| TGGACAATCTGTATAGAAAT+GGG | - | chr2_4:15034150-15034169 | Msa0317350:CDS | 30.0% | |
| ATACCAACAATGTTTCCATA+AGG | - | chr2_4:15034204-15034223 | Msa0317350:CDS | 30.0% | |
| TACCAACAATGTTTCCATAA+GGG | - | chr2_4:15034205-15034224 | Msa0317350:CDS | 30.0% | |
| AGAACATGCAAAATTTAGGA+TGG | + | chr2_4:15034354-15034373 | None:intergenic | 30.0% | |
| GGTAAAAATGAAACAAACGG+CGG | + | chr2_4:15032226-15032245 | None:intergenic | 35.0% | |
| ! | TTTTACCATTACCACAACCA+TGG | - | chr2_4:15032239-15032258 | Msa0317350:three_prime_UTR | 35.0% |
| GATAAAAGAAGAACTTACCC+GGG | + | chr2_4:15032513-15032532 | None:intergenic | 35.0% | |
| GGATAAAAGAAGAACTTACC+CGG | + | chr2_4:15032514-15032533 | None:intergenic | 35.0% | |
| TGTTTGACTAACGTAAATGC+GGG | + | chr2_4:15033021-15033040 | None:intergenic | 35.0% | |
| !!! | ACTAGCCATGTTTTATTTGC+TGG | - | chr2_4:15033137-15033156 | Msa0317350:CDS | 35.0% |
| TGGATCCAGCAAATAAAACA+TGG | + | chr2_4:15033145-15033164 | None:intergenic | 35.0% | |
| GGTAGTGTAGTTGAATTTGA+TGG | - | chr2_4:15033298-15033317 | Msa0317350:intron | 35.0% | |
| ! | GGAAGATTTTGCAGCAAATT+TGG | - | chr2_4:15033458-15033477 | Msa0317350:intron | 35.0% |
| TTGCAGCAAATTTGGTAAAG+AGG | - | chr2_4:15033466-15033485 | Msa0317350:intron | 35.0% | |
| AGAGCAGATGCATAAAGAAT+TGG | - | chr2_4:15033503-15033522 | Msa0317350:intron | 35.0% | |
| AATTGGTGGAAATGATTGAG+AGG | - | chr2_4:15033520-15033539 | Msa0317350:intron | 35.0% | |
| AATGATTGAGAGGATGGAAA+AGG | - | chr2_4:15033530-15033549 | Msa0317350:intron | 35.0% | |
| TTTCTGAATCAGCGATATGA+GGG | + | chr2_4:15033652-15033671 | None:intergenic | 35.0% | |
| !! | ATCGCTGATTCAGAAACTAT+TGG | - | chr2_4:15033656-15033675 | Msa0317350:intron | 35.0% |
| !! | TCGCTGATTCAGAAACTATT+GGG | - | chr2_4:15033657-15033676 | Msa0317350:intron | 35.0% |
| TGTCCAATTCGTCAAAGTAA+GGG | + | chr2_4:15034136-15034155 | None:intergenic | 35.0% | |
| TTGTCCAATTCGTCAAAGTA+AGG | + | chr2_4:15034137-15034156 | None:intergenic | 35.0% | |
| TTCCCTTATGGAAACATTGT+TGG | + | chr2_4:15034210-15034229 | None:intergenic | 35.0% | |
| TGTTTCCATAAGGGAAGAAA+AGG | - | chr2_4:15034214-15034233 | Msa0317350:CDS | 35.0% | |
| GGTAAAAATGAAACAAACGG+CGG | + | chr2_4:15032226-15032245 | None:intergenic | 35.0% | |
| ! | TTTTACCATTACCACAACCA+TGG | - | chr2_4:15032239-15032258 | Msa0317350:three_prime_UTR | 35.0% |
| GATAAAAGAAGAACTTACCC+GGG | + | chr2_4:15032513-15032532 | None:intergenic | 35.0% | |
| GGATAAAAGAAGAACTTACC+CGG | + | chr2_4:15032514-15032533 | None:intergenic | 35.0% | |
| TGTTTGACTAACGTAAATGC+GGG | + | chr2_4:15033021-15033040 | None:intergenic | 35.0% | |
| !!! | ACTAGCCATGTTTTATTTGC+TGG | - | chr2_4:15033137-15033156 | Msa0317350:CDS | 35.0% |
| TGGATCCAGCAAATAAAACA+TGG | + | chr2_4:15033145-15033164 | None:intergenic | 35.0% | |
| GGTAGTGTAGTTGAATTTGA+TGG | - | chr2_4:15033298-15033317 | Msa0317350:intron | 35.0% | |
| ! | GGAAGATTTTGCAGCAAATT+TGG | - | chr2_4:15033458-15033477 | Msa0317350:intron | 35.0% |
| TTGCAGCAAATTTGGTAAAG+AGG | - | chr2_4:15033466-15033485 | Msa0317350:intron | 35.0% | |
| AGAGCAGATGCATAAAGAAT+TGG | - | chr2_4:15033503-15033522 | Msa0317350:intron | 35.0% | |
| AATTGGTGGAAATGATTGAG+AGG | - | chr2_4:15033520-15033539 | Msa0317350:intron | 35.0% | |
| AATGATTGAGAGGATGGAAA+AGG | - | chr2_4:15033530-15033549 | Msa0317350:intron | 35.0% | |
| TTTCTGAATCAGCGATATGA+GGG | + | chr2_4:15033652-15033671 | None:intergenic | 35.0% | |
| !! | ATCGCTGATTCAGAAACTAT+TGG | - | chr2_4:15033656-15033675 | Msa0317350:intron | 35.0% |
| !! | TCGCTGATTCAGAAACTATT+GGG | - | chr2_4:15033657-15033676 | Msa0317350:intron | 35.0% |
| TGTCCAATTCGTCAAAGTAA+GGG | + | chr2_4:15034136-15034155 | None:intergenic | 35.0% | |
| TTGTCCAATTCGTCAAAGTA+AGG | + | chr2_4:15034137-15034156 | None:intergenic | 35.0% | |
| TTCCCTTATGGAAACATTGT+TGG | + | chr2_4:15034210-15034229 | None:intergenic | 35.0% | |
| TGTTTCCATAAGGGAAGAAA+AGG | - | chr2_4:15034214-15034233 | Msa0317350:CDS | 35.0% | |
| ATGTAGAATTTCCTGATGGC+AGG | - | chr2_4:15033101-15033120 | Msa0317350:CDS | 40.0% | |
| TGTAGAATTTCCTGATGGCA+GGG | - | chr2_4:15033102-15033121 | Msa0317350:CDS | 40.0% | |
| ACTACACTACCATGCAATAG+CGG | + | chr2_4:15033289-15033308 | None:intergenic | 40.0% | |
| TCATCATTTCAGCTCGTCTT+CGG | - | chr2_4:15033359-15033378 | Msa0317350:intron | 40.0% | |
| AATTCGGCTCAAGAAAGAGA+AGG | - | chr2_4:15033415-15033434 | Msa0317350:intron | 40.0% | |
| GCAGATGCATAAAGAATTGG+TGG | - | chr2_4:15033506-15033525 | Msa0317350:intron | 40.0% | |
| TTGAGAGGATGGAAAAGGAA+AGG | - | chr2_4:15033535-15033554 | Msa0317350:intron | 40.0% | |
| GGATAAAGAGAGAAGAAGCA+TGG | - | chr2_4:15033556-15033575 | Msa0317350:intron | 40.0% | |
| GTTTCTGAATCAGCGATATG+AGG | + | chr2_4:15033653-15033672 | None:intergenic | 40.0% | |
| AAGAGAAGAGGATGAAGTTG+AGG | - | chr2_4:15033722-15033741 | Msa0317350:intron | 40.0% | |
| !! | CTAGCCTTAATCCAGTACAT+GGG | - | chr2_4:15033819-15033838 | Msa0317350:intron | 40.0% |
| ! | TAGCCTTAATCCAGTACATG+GGG | - | chr2_4:15033820-15033839 | Msa0317350:intron | 40.0% |
| GAACACAAGTTCGGTCATAT+GGG | - | chr2_4:15033951-15033970 | Msa0317350:intron | 40.0% | |
| TGGGATCGAAAGGATCAATA+TGG | - | chr2_4:15033970-15033989 | Msa0317350:intron | 40.0% | |
| GGGATCGAAAGGATCAATAT+GGG | - | chr2_4:15033971-15033990 | Msa0317350:intron | 40.0% | |
| ATCGAAAGGATCAATATGGG+AGG | - | chr2_4:15033974-15033993 | Msa0317350:intron | 40.0% | |
| ! | GAAGAAGTGCAAGGAGAAAT+GGG | - | chr2_4:15034040-15034059 | Msa0317350:intron | 40.0% |
| AAGTACTATAGGAGGACAGT+TGG | - | chr2_4:15034074-15034093 | Msa0317350:intron | 40.0% | |
| AGTACTATAGGAGGACAGTT+GGG | - | chr2_4:15034075-15034094 | Msa0317350:intron | 40.0% | |
| !!! | GGGCAAGTTTTGCTATTAAC+AGG | + | chr2_4:15034116-15034135 | None:intergenic | 40.0% |
| TTGCCCTTACTTTGACGAAT+TGG | - | chr2_4:15034130-15034149 | Msa0317350:CDS | 40.0% | |
| TCTGTATAGAAATGGGTCCT+TGG | - | chr2_4:15034157-15034176 | Msa0317350:CDS | 40.0% | |
| TGCATTTCCATTTCTCTCCA+AGG | + | chr2_4:15034177-15034196 | None:intergenic | 40.0% | |
| ATAAGGGAAGAAAAGGAGCA+GGG | - | chr2_4:15034221-15034240 | Msa0317350:CDS | 40.0% | |
| ATGTAGAATTTCCTGATGGC+AGG | - | chr2_4:15033101-15033120 | Msa0317350:CDS | 40.0% | |
| TGTAGAATTTCCTGATGGCA+GGG | - | chr2_4:15033102-15033121 | Msa0317350:CDS | 40.0% | |
| ACTACACTACCATGCAATAG+CGG | + | chr2_4:15033289-15033308 | None:intergenic | 40.0% | |
| TCATCATTTCAGCTCGTCTT+CGG | - | chr2_4:15033359-15033378 | Msa0317350:intron | 40.0% | |
| AATTCGGCTCAAGAAAGAGA+AGG | - | chr2_4:15033415-15033434 | Msa0317350:intron | 40.0% | |
| GCAGATGCATAAAGAATTGG+TGG | - | chr2_4:15033506-15033525 | Msa0317350:intron | 40.0% | |
| TTGAGAGGATGGAAAAGGAA+AGG | - | chr2_4:15033535-15033554 | Msa0317350:intron | 40.0% | |
| GGATAAAGAGAGAAGAAGCA+TGG | - | chr2_4:15033556-15033575 | Msa0317350:intron | 40.0% | |
| GTTTCTGAATCAGCGATATG+AGG | + | chr2_4:15033653-15033672 | None:intergenic | 40.0% | |
| AAGAGAAGAGGATGAAGTTG+AGG | - | chr2_4:15033722-15033741 | Msa0317350:intron | 40.0% | |
| !! | CTAGCCTTAATCCAGTACAT+GGG | - | chr2_4:15033819-15033838 | Msa0317350:intron | 40.0% |
| ! | TAGCCTTAATCCAGTACATG+GGG | - | chr2_4:15033820-15033839 | Msa0317350:intron | 40.0% |
| GAACACAAGTTCGGTCATAT+GGG | - | chr2_4:15033951-15033970 | Msa0317350:intron | 40.0% | |
| TGGGATCGAAAGGATCAATA+TGG | - | chr2_4:15033970-15033989 | Msa0317350:intron | 40.0% | |
| GGGATCGAAAGGATCAATAT+GGG | - | chr2_4:15033971-15033990 | Msa0317350:intron | 40.0% | |
| ATCGAAAGGATCAATATGGG+AGG | - | chr2_4:15033974-15033993 | Msa0317350:intron | 40.0% | |
| ! | GAAGAAGTGCAAGGAGAAAT+GGG | - | chr2_4:15034040-15034059 | Msa0317350:intron | 40.0% |
| AAGTACTATAGGAGGACAGT+TGG | - | chr2_4:15034074-15034093 | Msa0317350:intron | 40.0% | |
| AGTACTATAGGAGGACAGTT+GGG | - | chr2_4:15034075-15034094 | Msa0317350:intron | 40.0% | |
| !!! | GGGCAAGTTTTGCTATTAAC+AGG | + | chr2_4:15034116-15034135 | None:intergenic | 40.0% |
| TTGCCCTTACTTTGACGAAT+TGG | - | chr2_4:15034130-15034149 | Msa0317350:CDS | 40.0% | |
| TCTGTATAGAAATGGGTCCT+TGG | - | chr2_4:15034157-15034176 | Msa0317350:CDS | 40.0% | |
| TGCATTTCCATTTCTCTCCA+AGG | + | chr2_4:15034177-15034196 | None:intergenic | 40.0% | |
| ATAAGGGAAGAAAAGGAGCA+GGG | - | chr2_4:15034221-15034240 | Msa0317350:CDS | 40.0% | |
| ! | GTTACTGCCTTACTGGTTAC+TGG | + | chr2_4:15032196-15032215 | None:intergenic | 45.0% |
| !! | TTTTTGGGGATTGTGGTGGT+TGG | + | chr2_4:15032346-15032365 | None:intergenic | 45.0% |
| !! | TGAGTTTTTGGGGATTGTGG+TGG | + | chr2_4:15032350-15032369 | None:intergenic | 45.0% |
| !! | GGATGAGTTTTTGGGGATTG+TGG | + | chr2_4:15032353-15032372 | None:intergenic | 45.0% |
| ! | CTGATGGGGATGAGTTTTTG+GGG | + | chr2_4:15032360-15032379 | None:intergenic | 45.0% |
| ! | CCTGATGGGGATGAGTTTTT+GGG | + | chr2_4:15032361-15032380 | None:intergenic | 45.0% |
| ! | ACCTGATGGGGATGAGTTTT+TGG | + | chr2_4:15032362-15032381 | None:intergenic | 45.0% |
| CTTTATGGAAGGTGGTAGAG+GGG | + | chr2_4:15032433-15032452 | None:intergenic | 45.0% | |
| CCTTTATGGAAGGTGGTAGA+GGG | + | chr2_4:15032434-15032453 | None:intergenic | 45.0% | |
| ACCTTTATGGAAGGTGGTAG+AGG | + | chr2_4:15032435-15032454 | None:intergenic | 45.0% | |
| TTACCCGGGTTCTTGACAAA+GGG | + | chr2_4:15032499-15032518 | None:intergenic | 45.0% | |
| GTAGAATTTCCTGATGGCAG+GGG | - | chr2_4:15033103-15033122 | Msa0317350:CDS | 45.0% | |
| GTCAATTAGCCGCTATTGCA+TGG | - | chr2_4:15033277-15033296 | Msa0317350:intron | 45.0% | |
| GAGAAAGAGTTCGAGAAAGC+TGG | - | chr2_4:15033437-15033456 | Msa0317350:intron | 45.0% | |
| GGTGGAAATGATTGAGAGGA+TGG | - | chr2_4:15033524-15033543 | Msa0317350:intron | 45.0% | |
| GGAGATGGAGAGAATTAAGC+AGG | - | chr2_4:15033587-15033606 | Msa0317350:intron | 45.0% | |
| AGGAAGCGGAATAAGAGAAG+AGG | - | chr2_4:15033710-15033729 | Msa0317350:intron | 45.0% | |
| CCATGTACTGGATTAAGGCT+AGG | + | chr2_4:15033821-15033840 | None:intergenic | 45.0% | |
| !! | CCTAGCCTTAATCCAGTACA+TGG | - | chr2_4:15033818-15033837 | Msa0317350:intron | 45.0% |
| ! | TTGTTATTGCTCACCTCAGC+CGG | + | chr2_4:15033846-15033865 | None:intergenic | 45.0% |
| GCGATCCAAGTAACAGTAGA+TGG | - | chr2_4:15033883-15033902 | Msa0317350:intron | 45.0% | |
| TCTGGCCATCTACTGTTACT+TGG | + | chr2_4:15033891-15033910 | None:intergenic | 45.0% | |
| AGCGCTTGTACTTCAACATC+TGG | + | chr2_4:15033909-15033928 | None:intergenic | 45.0% | |
| CATAGCAGTAAGAACCGCAT+TGG | - | chr2_4:15033929-15033948 | Msa0317350:intron | 45.0% | |
| ACCGCATTGGAACACAAGTT+CGG | - | chr2_4:15033942-15033961 | Msa0317350:intron | 45.0% | |
| ACCGAACTTGTGTTCCAATG+CGG | + | chr2_4:15033946-15033965 | None:intergenic | 45.0% | |
| GGAACACAAGTTCGGTCATA+TGG | - | chr2_4:15033950-15033969 | Msa0317350:intron | 45.0% | |
| TTCGGTCATATGGGATCGAA+AGG | - | chr2_4:15033960-15033979 | Msa0317350:intron | 45.0% | |
| TCAATATGGGAGGAGATAGC+TGG | - | chr2_4:15033984-15034003 | Msa0317350:intron | 45.0% | |
| ! | CGAAGAAGTGCAAGGAGAAA+TGG | - | chr2_4:15034039-15034058 | Msa0317350:intron | 45.0% |
| AATGGGTCCTTGGAGAGAAA+TGG | - | chr2_4:15034167-15034186 | Msa0317350:CDS | 45.0% | |
| ! | CTGCTCCTTTTCTTCCCTTA+TGG | + | chr2_4:15034222-15034241 | None:intergenic | 45.0% |
| CATAAGGGAAGAAAAGGAGC+AGG | - | chr2_4:15034220-15034239 | Msa0317350:CDS | 45.0% | |
| ! | GTTACTGCCTTACTGGTTAC+TGG | + | chr2_4:15032196-15032215 | None:intergenic | 45.0% |
| !! | TTTTTGGGGATTGTGGTGGT+TGG | + | chr2_4:15032346-15032365 | None:intergenic | 45.0% |
| !! | TGAGTTTTTGGGGATTGTGG+TGG | + | chr2_4:15032350-15032369 | None:intergenic | 45.0% |
| !! | GGATGAGTTTTTGGGGATTG+TGG | + | chr2_4:15032353-15032372 | None:intergenic | 45.0% |
| ! | CTGATGGGGATGAGTTTTTG+GGG | + | chr2_4:15032360-15032379 | None:intergenic | 45.0% |
| ! | CCTGATGGGGATGAGTTTTT+GGG | + | chr2_4:15032361-15032380 | None:intergenic | 45.0% |
| ! | ACCTGATGGGGATGAGTTTT+TGG | + | chr2_4:15032362-15032381 | None:intergenic | 45.0% |
| CTTTATGGAAGGTGGTAGAG+GGG | + | chr2_4:15032433-15032452 | None:intergenic | 45.0% | |
| CCTTTATGGAAGGTGGTAGA+GGG | + | chr2_4:15032434-15032453 | None:intergenic | 45.0% | |
| ACCTTTATGGAAGGTGGTAG+AGG | + | chr2_4:15032435-15032454 | None:intergenic | 45.0% | |
| TTACCCGGGTTCTTGACAAA+GGG | + | chr2_4:15032499-15032518 | None:intergenic | 45.0% | |
| GTAGAATTTCCTGATGGCAG+GGG | - | chr2_4:15033103-15033122 | Msa0317350:CDS | 45.0% | |
| GTCAATTAGCCGCTATTGCA+TGG | - | chr2_4:15033277-15033296 | Msa0317350:intron | 45.0% | |
| GAGAAAGAGTTCGAGAAAGC+TGG | - | chr2_4:15033437-15033456 | Msa0317350:intron | 45.0% | |
| GGTGGAAATGATTGAGAGGA+TGG | - | chr2_4:15033524-15033543 | Msa0317350:intron | 45.0% | |
| GGAGATGGAGAGAATTAAGC+AGG | - | chr2_4:15033587-15033606 | Msa0317350:intron | 45.0% | |
| AGGAAGCGGAATAAGAGAAG+AGG | - | chr2_4:15033710-15033729 | Msa0317350:intron | 45.0% | |
| CCATGTACTGGATTAAGGCT+AGG | + | chr2_4:15033821-15033840 | None:intergenic | 45.0% | |
| !! | CCTAGCCTTAATCCAGTACA+TGG | - | chr2_4:15033818-15033837 | Msa0317350:intron | 45.0% |
| ! | TTGTTATTGCTCACCTCAGC+CGG | + | chr2_4:15033846-15033865 | None:intergenic | 45.0% |
| GCGATCCAAGTAACAGTAGA+TGG | - | chr2_4:15033883-15033902 | Msa0317350:intron | 45.0% | |
| TCTGGCCATCTACTGTTACT+TGG | + | chr2_4:15033891-15033910 | None:intergenic | 45.0% | |
| AGCGCTTGTACTTCAACATC+TGG | + | chr2_4:15033909-15033928 | None:intergenic | 45.0% | |
| CATAGCAGTAAGAACCGCAT+TGG | - | chr2_4:15033929-15033948 | Msa0317350:intron | 45.0% | |
| ACCGCATTGGAACACAAGTT+CGG | - | chr2_4:15033942-15033961 | Msa0317350:intron | 45.0% | |
| ACCGAACTTGTGTTCCAATG+CGG | + | chr2_4:15033946-15033965 | None:intergenic | 45.0% | |
| GGAACACAAGTTCGGTCATA+TGG | - | chr2_4:15033950-15033969 | Msa0317350:intron | 45.0% | |
| TTCGGTCATATGGGATCGAA+AGG | - | chr2_4:15033960-15033979 | Msa0317350:intron | 45.0% | |
| TCAATATGGGAGGAGATAGC+TGG | - | chr2_4:15033984-15034003 | Msa0317350:intron | 45.0% | |
| ! | CGAAGAAGTGCAAGGAGAAA+TGG | - | chr2_4:15034039-15034058 | Msa0317350:intron | 45.0% |
| AATGGGTCCTTGGAGAGAAA+TGG | - | chr2_4:15034167-15034186 | Msa0317350:CDS | 45.0% | |
| ! | CTGCTCCTTTTCTTCCCTTA+TGG | + | chr2_4:15034222-15034241 | None:intergenic | 45.0% |
| CATAAGGGAAGAAAAGGAGC+AGG | - | chr2_4:15034220-15034239 | Msa0317350:CDS | 45.0% | |
| GCTGTCCATGGTTGTGGTAA+TGG | + | chr2_4:15032247-15032266 | None:intergenic | 50.0% | |
| GTTCATGCTGTCCATGGTTG+TGG | + | chr2_4:15032253-15032272 | None:intergenic | 50.0% | |
| AAATGGAGCAACATGGTCGG+AGG | + | chr2_4:15032283-15032302 | None:intergenic | 50.0% | |
| GGGAAATGGAGCAACATGGT+CGG | + | chr2_4:15032286-15032305 | None:intergenic | 50.0% | |
| AGTCGGGAAATGGAGCAACA+TGG | + | chr2_4:15032290-15032309 | None:intergenic | 50.0% | |
| CCCAAAAACTCATCCCCATC+AGG | - | chr2_4:15032358-15032377 | Msa0317350:CDS | 50.0% | |
| CCCTCTACCACCTTCCATAA+AGG | - | chr2_4:15032431-15032450 | Msa0317350:CDS | 50.0% | |
| ACCACCTTCCATAAAGGTCG+AGG | - | chr2_4:15032437-15032456 | Msa0317350:CDS | 50.0% | |
| TCCTCGACCTTTATGGAAGG+TGG | + | chr2_4:15032441-15032460 | None:intergenic | 50.0% | |
| CAAAGAAGAATGACCCGACC+CGG | + | chr2_4:15032475-15032494 | None:intergenic | 50.0% | |
| TTGCCCCTTTGTCAAGAACC+CGG | - | chr2_4:15032492-15032511 | Msa0317350:CDS | 50.0% | |
| TACCCGGGTTCTTGACAAAG+GGG | + | chr2_4:15032498-15032517 | None:intergenic | 50.0% | |
| CTTACCCGGGTTCTTGACAA+AGG | + | chr2_4:15032500-15032519 | None:intergenic | 50.0% | |
| TTTCCTGATGGCAGGGGTTT+CGG | - | chr2_4:15033109-15033128 | Msa0317350:CDS | 50.0% | |
| CTTATTCCGCTTCCTTCTGC+TGG | + | chr2_4:15033705-15033724 | None:intergenic | 50.0% | |
| CTGGATTAAGGCTAGGCTGT+TGG | + | chr2_4:15033814-15033833 | None:intergenic | 50.0% | |
| CTTAATCCAGTACATGGGGC+CGG | - | chr2_4:15033824-15033843 | Msa0317350:intron | 50.0% | |
| !! | GAGATAGCTGGAGCATTGCA+GGG | - | chr2_4:15033996-15034015 | Msa0317350:intron | 50.0% |
| ! | TCGTTCTGCGAAGAAGTGCA+AGG | - | chr2_4:15034031-15034050 | Msa0317350:intron | 50.0% |
| TATAGGAGGACAGTTGGGAG+CGG | - | chr2_4:15034080-15034099 | Msa0317350:intron | 50.0% | |
| GCTGTCCATGGTTGTGGTAA+TGG | + | chr2_4:15032247-15032266 | None:intergenic | 50.0% | |
| GTTCATGCTGTCCATGGTTG+TGG | + | chr2_4:15032253-15032272 | None:intergenic | 50.0% | |
| AAATGGAGCAACATGGTCGG+AGG | + | chr2_4:15032283-15032302 | None:intergenic | 50.0% | |
| GGGAAATGGAGCAACATGGT+CGG | + | chr2_4:15032286-15032305 | None:intergenic | 50.0% | |
| AGTCGGGAAATGGAGCAACA+TGG | + | chr2_4:15032290-15032309 | None:intergenic | 50.0% | |
| CCCAAAAACTCATCCCCATC+AGG | - | chr2_4:15032358-15032377 | Msa0317350:CDS | 50.0% | |
| CCCTCTACCACCTTCCATAA+AGG | - | chr2_4:15032431-15032450 | Msa0317350:CDS | 50.0% | |
| ACCACCTTCCATAAAGGTCG+AGG | - | chr2_4:15032437-15032456 | Msa0317350:CDS | 50.0% | |
| TCCTCGACCTTTATGGAAGG+TGG | + | chr2_4:15032441-15032460 | None:intergenic | 50.0% | |
| CAAAGAAGAATGACCCGACC+CGG | + | chr2_4:15032475-15032494 | None:intergenic | 50.0% | |
| TTGCCCCTTTGTCAAGAACC+CGG | - | chr2_4:15032492-15032511 | Msa0317350:CDS | 50.0% | |
| TACCCGGGTTCTTGACAAAG+GGG | + | chr2_4:15032498-15032517 | None:intergenic | 50.0% | |
| CTTACCCGGGTTCTTGACAA+AGG | + | chr2_4:15032500-15032519 | None:intergenic | 50.0% | |
| TTTCCTGATGGCAGGGGTTT+CGG | - | chr2_4:15033109-15033128 | Msa0317350:CDS | 50.0% | |
| CTTATTCCGCTTCCTTCTGC+TGG | + | chr2_4:15033705-15033724 | None:intergenic | 50.0% | |
| CTGGATTAAGGCTAGGCTGT+TGG | + | chr2_4:15033814-15033833 | None:intergenic | 50.0% | |
| CTTAATCCAGTACATGGGGC+CGG | - | chr2_4:15033824-15033843 | Msa0317350:intron | 50.0% | |
| !! | GAGATAGCTGGAGCATTGCA+GGG | - | chr2_4:15033996-15034015 | Msa0317350:intron | 50.0% |
| ! | TCGTTCTGCGAAGAAGTGCA+AGG | - | chr2_4:15034031-15034050 | Msa0317350:intron | 50.0% |
| TATAGGAGGACAGTTGGGAG+CGG | - | chr2_4:15034080-15034099 | Msa0317350:intron | 50.0% | |
| CGTGAGGGTTACTGCCTTAC+TGG | + | chr2_4:15032203-15032222 | None:intergenic | 55.0% | |
| TGAAACAAACGGCGGCGTGA+GGG | + | chr2_4:15032218-15032237 | None:intergenic | 55.0% | |
| ATGAAACAAACGGCGGCGTG+AGG | + | chr2_4:15032219-15032238 | None:intergenic | 55.0% | |
| GAGGAGGTTCATGCTGTCCA+TGG | + | chr2_4:15032259-15032278 | None:intergenic | 55.0% | |
| GTTGCTCCATTTCCCGACTC+CGG | - | chr2_4:15032291-15032310 | Msa0317350:three_prime_UTR | 55.0% | |
| AAGATAAGGTCGCCGGAGTC+GGG | + | chr2_4:15032306-15032325 | None:intergenic | 55.0% | |
| GAAGATAAGGTCGCCGGAGT+CGG | + | chr2_4:15032307-15032326 | None:intergenic | 55.0% | |
| GATTGTGGTGGTTGGAGAGG+AGG | + | chr2_4:15032338-15032357 | None:intergenic | 55.0% | |
| TGAGAAGGGAAACCAGGAGG+AGG | + | chr2_4:15032405-15032424 | None:intergenic | 55.0% | |
| TGGTGAGAAGGGAAACCAGG+AGG | + | chr2_4:15032408-15032427 | None:intergenic | 55.0% | |
| GTGTGGTGAGAAGGGAAACC+AGG | + | chr2_4:15032411-15032430 | None:intergenic | 55.0% | |
| ! | GTAGAGGGGTGTGGTGAGAA+GGG | + | chr2_4:15032419-15032438 | None:intergenic | 55.0% |
| GGGTCCTCGACCTTTATGGA+AGG | + | chr2_4:15032444-15032463 | None:intergenic | 55.0% | |
| AGACGGGTCCTCGACCTTTA+TGG | + | chr2_4:15032448-15032467 | None:intergenic | 55.0% | |
| TGCCCCTTTGTCAAGAACCC+GGG | - | chr2_4:15032493-15032512 | Msa0317350:CDS | 55.0% | |
| AGCTCGTCTTCGGATGACGT+GGG | - | chr2_4:15033369-15033388 | Msa0317350:intron | 55.0% | |
| ! | AGAAGAAGCATGGAAGCGCG+AGG | - | chr2_4:15033566-15033585 | Msa0317350:intron | 55.0% |
| GCAGGACGAAGAAGCTAGAG+CGG | - | chr2_4:15033605-15033624 | Msa0317350:intron | 55.0% | |
| AAGAAGCTAGAGCGGCTGAG+AGG | - | chr2_4:15033613-15033632 | Msa0317350:intron | 55.0% | |
| CAGATTCCTCCACCAGCAGA+AGG | - | chr2_4:15033690-15033709 | Msa0317350:intron | 55.0% | |
| ATTCCGCTTCCTTCTGCTGG+TGG | + | chr2_4:15033702-15033721 | None:intergenic | 55.0% | |
| CGGCCCCATGTACTGGATTA+AGG | + | chr2_4:15033826-15033845 | None:intergenic | 55.0% | |
| !! | GGAGATAGCTGGAGCATTGC+AGG | - | chr2_4:15033995-15034014 | Msa0317350:intron | 55.0% |
| CAGTTGGGAGCGGCAAGAAA+CGG | - | chr2_4:15034090-15034109 | Msa0317350:CDS | 55.0% | |
| CGTGAGGGTTACTGCCTTAC+TGG | + | chr2_4:15032203-15032222 | None:intergenic | 55.0% | |
| TGAAACAAACGGCGGCGTGA+GGG | + | chr2_4:15032218-15032237 | None:intergenic | 55.0% | |
| ATGAAACAAACGGCGGCGTG+AGG | + | chr2_4:15032219-15032238 | None:intergenic | 55.0% | |
| GAGGAGGTTCATGCTGTCCA+TGG | + | chr2_4:15032259-15032278 | None:intergenic | 55.0% | |
| GTTGCTCCATTTCCCGACTC+CGG | - | chr2_4:15032291-15032310 | Msa0317350:three_prime_UTR | 55.0% | |
| AAGATAAGGTCGCCGGAGTC+GGG | + | chr2_4:15032306-15032325 | None:intergenic | 55.0% | |
| GAAGATAAGGTCGCCGGAGT+CGG | + | chr2_4:15032307-15032326 | None:intergenic | 55.0% | |
| GATTGTGGTGGTTGGAGAGG+AGG | + | chr2_4:15032338-15032357 | None:intergenic | 55.0% | |
| TGAGAAGGGAAACCAGGAGG+AGG | + | chr2_4:15032405-15032424 | None:intergenic | 55.0% | |
| TGGTGAGAAGGGAAACCAGG+AGG | + | chr2_4:15032408-15032427 | None:intergenic | 55.0% | |
| GTGTGGTGAGAAGGGAAACC+AGG | + | chr2_4:15032411-15032430 | None:intergenic | 55.0% | |
| ! | GTAGAGGGGTGTGGTGAGAA+GGG | + | chr2_4:15032419-15032438 | None:intergenic | 55.0% |
| GGGTCCTCGACCTTTATGGA+AGG | + | chr2_4:15032444-15032463 | None:intergenic | 55.0% | |
| AGACGGGTCCTCGACCTTTA+TGG | + | chr2_4:15032448-15032467 | None:intergenic | 55.0% | |
| TGCCCCTTTGTCAAGAACCC+GGG | - | chr2_4:15032493-15032512 | Msa0317350:CDS | 55.0% | |
| AGCTCGTCTTCGGATGACGT+GGG | - | chr2_4:15033369-15033388 | Msa0317350:intron | 55.0% | |
| ! | AGAAGAAGCATGGAAGCGCG+AGG | - | chr2_4:15033566-15033585 | Msa0317350:intron | 55.0% |
| GCAGGACGAAGAAGCTAGAG+CGG | - | chr2_4:15033605-15033624 | Msa0317350:intron | 55.0% | |
| AAGAAGCTAGAGCGGCTGAG+AGG | - | chr2_4:15033613-15033632 | Msa0317350:intron | 55.0% | |
| CAGATTCCTCCACCAGCAGA+AGG | - | chr2_4:15033690-15033709 | Msa0317350:intron | 55.0% | |
| ATTCCGCTTCCTTCTGCTGG+TGG | + | chr2_4:15033702-15033721 | None:intergenic | 55.0% | |
| CGGCCCCATGTACTGGATTA+AGG | + | chr2_4:15033826-15033845 | None:intergenic | 55.0% | |
| !! | GGAGATAGCTGGAGCATTGC+AGG | - | chr2_4:15033995-15034014 | Msa0317350:intron | 55.0% |
| CAGTTGGGAGCGGCAAGAAA+CGG | - | chr2_4:15034090-15034109 | Msa0317350:CDS | 55.0% | |
| GGGGATTGTGGTGGTTGGAG+AGG | + | chr2_4:15032341-15032360 | None:intergenic | 60.0% | |
| GAGGAGGGATGGACCTGATG+GGG | + | chr2_4:15032374-15032393 | None:intergenic | 60.0% | |
| GGAGGAGGGATGGACCTGAT+GGG | + | chr2_4:15032375-15032394 | None:intergenic | 60.0% | |
| AGGAGGAGGGATGGACCTGA+TGG | + | chr2_4:15032376-15032395 | None:intergenic | 60.0% | |
| AAACCAGGAGGAGGAGGAGG+AGG | + | chr2_4:15032396-15032415 | None:intergenic | 60.0% | |
| GAAGGGAAACCAGGAGGAGG+AGG | + | chr2_4:15032402-15032421 | None:intergenic | 60.0% | |
| ! | GGTAGAGGGGTGTGGTGAGA+AGG | + | chr2_4:15032420-15032439 | None:intergenic | 60.0% |
| TGGAAGGTGGTAGAGGGGTG+TGG | + | chr2_4:15032428-15032447 | None:intergenic | 60.0% | |
| GATCCGAAACCCCTGCCATC+AGG | + | chr2_4:15033115-15033134 | None:intergenic | 60.0% | |
| CAGCTCGTCTTCGGATGACG+TGG | - | chr2_4:15033368-15033387 | Msa0317350:intron | 60.0% | |
| ! | AGCATGGAAGCGCGAGGAGA+TGG | - | chr2_4:15033572-15033591 | Msa0317350:intron | 60.0% |
| CCTCCACCAGCAGAAGGAAG+CGG | - | chr2_4:15033696-15033715 | Msa0317350:intron | 60.0% | |
| CCACGTTGTGGGTCAAGGGT+GGG | + | chr2_4:15033767-15033786 | None:intergenic | 60.0% | |
| CCACCCTTGACCCACAACGT+GGG | - | chr2_4:15033765-15033784 | Msa0317350:intron | 60.0% | |
| CACCCTTGACCCACAACGTG+GGG | - | chr2_4:15033766-15033785 | Msa0317350:intron | 60.0% | |
| GACCCCACGTTGTGGGTCAA+GGG | + | chr2_4:15033771-15033790 | None:intergenic | 60.0% | |
| CTTGACCCACAACGTGGGGT+CGG | - | chr2_4:15033770-15033789 | Msa0317350:intron | 60.0% | |
| !! | AGCTGGAGCATTGCAGGGCA+TGG | - | chr2_4:15034001-15034020 | Msa0317350:intron | 60.0% |
| !! | GCTGGAGCATTGCAGGGCAT+GGG | - | chr2_4:15034002-15034021 | Msa0317350:intron | 60.0% |
| GGGGATTGTGGTGGTTGGAG+AGG | + | chr2_4:15032341-15032360 | None:intergenic | 60.0% | |
| GAGGAGGGATGGACCTGATG+GGG | + | chr2_4:15032374-15032393 | None:intergenic | 60.0% | |
| GGAGGAGGGATGGACCTGAT+GGG | + | chr2_4:15032375-15032394 | None:intergenic | 60.0% | |
| AGGAGGAGGGATGGACCTGA+TGG | + | chr2_4:15032376-15032395 | None:intergenic | 60.0% | |
| AAACCAGGAGGAGGAGGAGG+AGG | + | chr2_4:15032396-15032415 | None:intergenic | 60.0% | |
| GAAGGGAAACCAGGAGGAGG+AGG | + | chr2_4:15032402-15032421 | None:intergenic | 60.0% | |
| ! | GGTAGAGGGGTGTGGTGAGA+AGG | + | chr2_4:15032420-15032439 | None:intergenic | 60.0% |
| TGGAAGGTGGTAGAGGGGTG+TGG | + | chr2_4:15032428-15032447 | None:intergenic | 60.0% | |
| GATCCGAAACCCCTGCCATC+AGG | + | chr2_4:15033115-15033134 | None:intergenic | 60.0% | |
| CAGCTCGTCTTCGGATGACG+TGG | - | chr2_4:15033368-15033387 | Msa0317350:intron | 60.0% | |
| ! | AGCATGGAAGCGCGAGGAGA+TGG | - | chr2_4:15033572-15033591 | Msa0317350:intron | 60.0% |
| CCTCCACCAGCAGAAGGAAG+CGG | - | chr2_4:15033696-15033715 | Msa0317350:intron | 60.0% | |
| CCACGTTGTGGGTCAAGGGT+GGG | + | chr2_4:15033767-15033786 | None:intergenic | 60.0% | |
| CCACCCTTGACCCACAACGT+GGG | - | chr2_4:15033765-15033784 | Msa0317350:intron | 60.0% | |
| CACCCTTGACCCACAACGTG+GGG | - | chr2_4:15033766-15033785 | Msa0317350:intron | 60.0% | |
| GACCCCACGTTGTGGGTCAA+GGG | + | chr2_4:15033771-15033790 | None:intergenic | 60.0% | |
| CTTGACCCACAACGTGGGGT+CGG | - | chr2_4:15033770-15033789 | Msa0317350:intron | 60.0% | |
| !! | AGCTGGAGCATTGCAGGGCA+TGG | - | chr2_4:15034001-15034020 | Msa0317350:intron | 60.0% |
| !! | GCTGGAGCATTGCAGGGCAT+GGG | - | chr2_4:15034002-15034021 | Msa0317350:intron | 60.0% |
| CAACATGGTCGGAGGCGAGG+AGG | + | chr2_4:15032275-15032294 | None:intergenic | 65.0% | |
| GAGCAACATGGTCGGAGGCG+AGG | + | chr2_4:15032278-15032297 | None:intergenic | 65.0% | |
| AGGTCGCCGGAGTCGGGAAA+TGG | + | chr2_4:15032300-15032319 | None:intergenic | 65.0% | |
| GGCGGCGAAGATAAGGTCGC+CGG | + | chr2_4:15032313-15032332 | None:intergenic | 65.0% | |
| GGCGACCTTATCTTCGCCGC+CGG | - | chr2_4:15032312-15032331 | Msa0317350:three_prime_UTR | 65.0% | |
| GTGGTGGTTGGAGAGGAGGC+CGG | + | chr2_4:15032334-15032353 | None:intergenic | 65.0% | |
| AGGAGGAGGAGGAGGAGGGA+TGG | + | chr2_4:15032385-15032404 | None:intergenic | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+GGG | + | chr2_4:15032389-15032408 | None:intergenic | 65.0% | |
| GGGAAACCAGGAGGAGGAGG+AGG | + | chr2_4:15032399-15032418 | None:intergenic | 65.0% | |
| GTCGAGGACCCGTCTCGATC+CGG | - | chr2_4:15032453-15032472 | Msa0317350:CDS | 65.0% | |
| TCGAGGACCCGTCTCGATCC+GGG | - | chr2_4:15032454-15032473 | Msa0317350:CDS | 65.0% | |
| TGACCCGACCCGGATCGAGA+CGG | + | chr2_4:15032465-15032484 | None:intergenic | 65.0% | |
| GCGCTGCTATTCGACGACGC+TGG | + | chr2_4:15033210-15033229 | None:intergenic | 65.0% | |
| CCGCTTCCTTCTGCTGGTGG+AGG | + | chr2_4:15033699-15033718 | None:intergenic | 65.0% | |
| CCCACCCTTGACCCACAACG+TGG | - | chr2_4:15033764-15033783 | Msa0317350:intron | 65.0% | |
| CCCACGTTGTGGGTCAAGGG+TGG | + | chr2_4:15033768-15033787 | None:intergenic | 65.0% | |
| CGACCCCACGTTGTGGGTCA+AGG | + | chr2_4:15033772-15033791 | None:intergenic | 65.0% | |
| CTCAGCCGACCCCACGTTGT+GGG | + | chr2_4:15033778-15033797 | None:intergenic | 65.0% | |
| CAACATGGTCGGAGGCGAGG+AGG | + | chr2_4:15032275-15032294 | None:intergenic | 65.0% | |
| GAGCAACATGGTCGGAGGCG+AGG | + | chr2_4:15032278-15032297 | None:intergenic | 65.0% | |
| AGGTCGCCGGAGTCGGGAAA+TGG | + | chr2_4:15032300-15032319 | None:intergenic | 65.0% | |
| GGCGGCGAAGATAAGGTCGC+CGG | + | chr2_4:15032313-15032332 | None:intergenic | 65.0% | |
| GGCGACCTTATCTTCGCCGC+CGG | - | chr2_4:15032312-15032331 | Msa0317350:three_prime_UTR | 65.0% | |
| GTGGTGGTTGGAGAGGAGGC+CGG | + | chr2_4:15032334-15032353 | None:intergenic | 65.0% | |
| AGGAGGAGGAGGAGGAGGGA+TGG | + | chr2_4:15032385-15032404 | None:intergenic | 65.0% | |
| GAGGAGGAGGAGGAGGAGGA+GGG | + | chr2_4:15032389-15032408 | None:intergenic | 65.0% | |
| GGGAAACCAGGAGGAGGAGG+AGG | + | chr2_4:15032399-15032418 | None:intergenic | 65.0% | |
| GTCGAGGACCCGTCTCGATC+CGG | - | chr2_4:15032453-15032472 | Msa0317350:CDS | 65.0% | |
| TCGAGGACCCGTCTCGATCC+GGG | - | chr2_4:15032454-15032473 | Msa0317350:CDS | 65.0% | |
| TGACCCGACCCGGATCGAGA+CGG | + | chr2_4:15032465-15032484 | None:intergenic | 65.0% | |
| GCGCTGCTATTCGACGACGC+TGG | + | chr2_4:15033210-15033229 | None:intergenic | 65.0% | |
| CCGCTTCCTTCTGCTGGTGG+AGG | + | chr2_4:15033699-15033718 | None:intergenic | 65.0% | |
| CCCACCCTTGACCCACAACG+TGG | - | chr2_4:15033764-15033783 | Msa0317350:intron | 65.0% | |
| CCCACGTTGTGGGTCAAGGG+TGG | + | chr2_4:15033768-15033787 | None:intergenic | 65.0% | |
| CGACCCCACGTTGTGGGTCA+AGG | + | chr2_4:15033772-15033791 | None:intergenic | 65.0% | |
| CTCAGCCGACCCCACGTTGT+GGG | + | chr2_4:15033778-15033797 | None:intergenic | 65.0% | |
| GGAGGCCGGCGGCGAAGATA+AGG | + | chr2_4:15032320-15032339 | None:intergenic | 70.0% | |
| GTGGTTGGAGAGGAGGCCGG+CGG | + | chr2_4:15032331-15032350 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:15032387-15032406 | None:intergenic | 70.0% | |
| CCAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:15032393-15032412 | None:intergenic | 70.0% | |
| CCTCCTCCTCCTCCTCCTCC+TGG | - | chr2_4:15032387-15032406 | Msa0317350:CDS | 70.0% | |
| GGACCCGTCTCGATCCGGGT+CGG | - | chr2_4:15032458-15032477 | Msa0317350:CDS | 70.0% | |
| GACCCGTCTCGATCCGGGTC+GGG | - | chr2_4:15032459-15032478 | Msa0317350:CDS | 70.0% | |
| GACCCGACCCGGATCGAGAC+GGG | + | chr2_4:15032464-15032483 | None:intergenic | 70.0% | |
| CCTCAGCCGACCCCACGTTG+TGG | + | chr2_4:15033779-15033798 | None:intergenic | 70.0% | |
| CCACAACGTGGGGTCGGCTG+AGG | - | chr2_4:15033776-15033795 | Msa0317350:intron | 70.0% | |
| CCTCAGCCGGCCCCATGTAC+TGG | + | chr2_4:15033833-15033852 | None:intergenic | 70.0% | |
| CCAGTACATGGGGCCGGCTG+AGG | - | chr2_4:15033830-15033849 | Msa0317350:intron | 70.0% | |
| GGAGGCCGGCGGCGAAGATA+AGG | + | chr2_4:15032320-15032339 | None:intergenic | 70.0% | |
| GTGGTTGGAGAGGAGGCCGG+CGG | + | chr2_4:15032331-15032350 | None:intergenic | 70.0% | |
| GGAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:15032387-15032406 | None:intergenic | 70.0% | |
| CCAGGAGGAGGAGGAGGAGG+AGG | + | chr2_4:15032393-15032412 | None:intergenic | 70.0% | |
| CCTCCTCCTCCTCCTCCTCC+TGG | - | chr2_4:15032387-15032406 | Msa0317350:CDS | 70.0% | |
| GGACCCGTCTCGATCCGGGT+CGG | - | chr2_4:15032458-15032477 | Msa0317350:CDS | 70.0% | |
| GACCCGTCTCGATCCGGGTC+GGG | - | chr2_4:15032459-15032478 | Msa0317350:CDS | 70.0% | |
| GACCCGACCCGGATCGAGAC+GGG | + | chr2_4:15032464-15032483 | None:intergenic | 70.0% | |
| CCTCAGCCGACCCCACGTTG+TGG | + | chr2_4:15033779-15033798 | None:intergenic | 70.0% | |
| CCACAACGTGGGGTCGGCTG+AGG | - | chr2_4:15033776-15033795 | Msa0317350:intron | 70.0% | |
| CCTCAGCCGGCCCCATGTAC+TGG | + | chr2_4:15033833-15033852 | None:intergenic | 70.0% | |
| CCAGTACATGGGGCCGGCTG+AGG | - | chr2_4:15033830-15033849 | Msa0317350:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 15032193 | 15034405 | 15032193 | ID=Msa0317350;Name=Msa0317350 |
| chr2_4 | mRNA | 15032193 | 15034405 | 15032193 | ID=Msa0317350-mRNA-1;Parent=Msa0317350;Name=Msa0317350-mRNA-1;_AED=0.00;_eAED=0.00;_QI=65|1|1|1|1|1|2|152|379 |
| chr2_4 | exon | 15032193 | 15033227 | 15032193 | ID=Msa0317350-mRNA-1:exon:5636;Parent=Msa0317350-mRNA-1 |
| chr2_4 | exon | 15034084 | 15034405 | 15034084 | ID=Msa0317350-mRNA-1:exon:5635;Parent=Msa0317350-mRNA-1 |
| chr2_4 | five_prime_UTR | 15034341 | 15034405 | 15034341 | ID=Msa0317350-mRNA-1:five_prime_utr;Parent=Msa0317350-mRNA-1 |
| chr2_4 | CDS | 15034084 | 15034340 | 15034084 | ID=Msa0317350-mRNA-1:cds;Parent=Msa0317350-mRNA-1 |
| chr2_4 | CDS | 15032345 | 15033227 | 15032345 | ID=Msa0317350-mRNA-1:cds;Parent=Msa0317350-mRNA-1 |
| chr2_4 | three_prime_UTR | 15032193 | 15032344 | 15032193 | ID=Msa0317350-mRNA-1:three_prime_utr;Parent=Msa0317350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
