Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318160 | XP_004503368.1 | 72.131 | 366 | 69 | 10 | 1 | 354 | 1 | 345 | 2.25e-167 | 480 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318160 | sp|Q9LVI4|TIF6B_ARATH | 35.248 | 383 | 175 | 18 | 1 | 354 | 1 | 339 | 2.55e-37 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0318160 | TF | Tify |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318160 | MtrunA17_Chr1g0161031 | 51.491 | 369 | 126 | 10 | 1 | 350 | 1 | 335 | 3.24e-104 | 310 |
| Msa0318160 | MtrunA17_Chr6g0478581 | 32.282 | 412 | 202 | 14 | 1 | 352 | 1 | 395 | 2.32e-44 | 157 |
| Msa0318160 | MtrunA17_Chr2g0301131 | 31.220 | 205 | 104 | 5 | 145 | 349 | 73 | 240 | 5.68e-16 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318160 | AT3G17860.1 | 35.248 | 383 | 175 | 18 | 1 | 354 | 1 | 339 | 2.59e-38 | 140 |
| Msa0318160 | AT3G17860.2 | 35.629 | 334 | 166 | 15 | 43 | 354 | 20 | 326 | 9.49e-34 | 127 |
| Msa0318160 | AT3G17860.3 | 35.799 | 338 | 154 | 16 | 46 | 354 | 3 | 306 | 2.81e-33 | 126 |
| Msa0318160 | AT3G17860.4 | 35.799 | 338 | 154 | 16 | 46 | 354 | 3 | 306 | 2.81e-33 | 126 |
| Msa0318160 | AT1G48500.1 | 34.358 | 358 | 163 | 18 | 1 | 351 | 1 | 293 | 3.67e-23 | 98.6 |
| Msa0318160 | AT1G70700.1 | 36.515 | 241 | 95 | 7 | 114 | 342 | 50 | 244 | 4.07e-23 | 97.4 |
| Msa0318160 | AT1G70700.2 | 34.529 | 223 | 84 | 6 | 122 | 342 | 58 | 220 | 1.28e-20 | 90.1 |
| Msa0318160 | AT1G70700.3 | 36.325 | 234 | 91 | 7 | 114 | 335 | 50 | 237 | 2.88e-20 | 89.7 |
| Msa0318160 | AT1G48500.2 | 32.551 | 341 | 159 | 17 | 1 | 335 | 1 | 276 | 4.76e-17 | 80.5 |
| Msa0318160 | AT1G74950.1 | 31.250 | 160 | 76 | 3 | 190 | 349 | 110 | 235 | 1.97e-13 | 69.7 |
| Msa0318160 | AT1G48500.3 | 32.432 | 296 | 141 | 14 | 46 | 335 | 4 | 246 | 2.33e-13 | 69.7 |
| Msa0318160 | AT5G20900.1 | 29.299 | 157 | 72 | 4 | 187 | 342 | 45 | 163 | 2.37e-11 | 62.8 |
Find 100 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTTCTTGTTAACGTTATA+TGG | 0.185210 | 2_4:+16491475 | None:intergenic |
| CTTTCCTTTGTCTCTGAAAA+TGG | 0.187386 | 2_4:-16494559 | Msa0318160:exon |
| TTACACCACAAAATGTATTA+AGG | 0.283207 | 2_4:+16491259 | None:intergenic |
| TGAAACTGAATTCGCTTGAT+TGG | 0.308537 | 2_4:+16492944 | None:intergenic |
| GAGGAGGGTGGTGCATTTGC+AGG | 0.320510 | 2_4:+16492132 | None:intergenic |
| ATATCATGTTGTACAGGATA+TGG | 0.337872 | 2_4:+16492984 | None:intergenic |
| CCCACCATTGGTGCCGTTGC+TGG | 0.348704 | 2_4:-16492804 | Msa0318160:CDS |
| CATAAAACCAGCAGATGTTA+TGG | 0.358564 | 2_4:+16493559 | None:intergenic |
| ATGGTAATGGCATTTACTTT+TGG | 0.361767 | 2_4:+16491976 | None:intergenic |
| GAAAATGGTGAGAGATTTCA+TGG | 0.368883 | 2_4:-16494544 | Msa0318160:exon |
| GGAGGCTCGGCATAGCTAAC+AGG | 0.369828 | 2_4:+16491997 | None:intergenic |
| ATATGAAGCTGCCACTGCTT+GGG | 0.375072 | 2_4:-16492860 | Msa0318160:CDS |
| GTCGATTGAGGTGCTGTAAC+AGG | 0.385607 | 2_4:+16492831 | None:intergenic |
| TGTAGGCTTCACAAAGGGTT+CGG | 0.418966 | 2_4:-16493681 | Msa0318160:intron |
| TTTCTCGCAGTTAAAACAAC+TGG | 0.425409 | 2_4:-16492033 | Msa0318160:CDS |
| CATTGGTGCCGTTGCTGGAA+TGG | 0.426755 | 2_4:-16492799 | Msa0318160:CDS |
| TTACTAGAGTCAAATGCGTC+TGG | 0.431875 | 2_4:+16493533 | None:intergenic |
| CGCATAGAAGATGGTAAGTT+GGG | 0.437429 | 2_4:+16492639 | None:intergenic |
| TAGAAATCTTTCAATCATGA+TGG | 0.438321 | 2_4:-16493035 | Msa0318160:CDS |
| GGCACAGGCTATCATGTTGT+TGG | 0.441154 | 2_4:-16492235 | Msa0318160:CDS |
| GCCATTACCATGCTGGCGTC+AGG | 0.445175 | 2_4:-16491964 | Msa0318160:intron |
| GTAGGCTTCACAAAGGGTTC+GGG | 0.445204 | 2_4:-16493680 | Msa0318160:intron |
| ATATCTATTTCATCGCATAC+TGG | 0.447688 | 2_4:-16492093 | Msa0318160:CDS |
| ACTCTCTGCTGCTGAACCTC+AGG | 0.447860 | 2_4:-16493507 | Msa0318160:intron |
| AATATGAAGCTGCCACTGCT+TGG | 0.449139 | 2_4:-16492861 | Msa0318160:CDS |
| TAGGGACTATTATCCTTGCT+TGG | 0.466049 | 2_4:+16491381 | None:intergenic |
| TTCAAAGGTCAAAGGTGGAC+TGG | 0.468782 | 2_4:-16491219 | Msa0318160:three_prime_UTR |
| CATAGCACAGACAAAAGTTC+AGG | 0.472424 | 2_4:-16492184 | Msa0318160:CDS |
| AGCAGATACTTTGTTGGAGA+AGG | 0.473320 | 2_4:+16493646 | None:intergenic |
| TCGCATACTGGTGCACAGTC+AGG | 0.473936 | 2_4:-16492081 | Msa0318160:CDS |
| ATAAAACCAGCAGATGTTAT+GGG | 0.478111 | 2_4:+16493560 | None:intergenic |
| TCTGATCCCATAACATCTGC+TGG | 0.481214 | 2_4:-16493566 | Msa0318160:CDS |
| TTGAGCAGCAGATACTTTGT+TGG | 0.486996 | 2_4:+16493640 | None:intergenic |
| GCAAATGCACCACCCTCCTC+TGG | 0.488995 | 2_4:-16492129 | Msa0318160:CDS |
| ATCTTCATATCATGTTGTAC+AGG | 0.490317 | 2_4:+16492978 | None:intergenic |
| TAAATAGTTTCATAAGGGTA+GGG | 0.491347 | 2_4:+16491363 | None:intergenic |
| GAAATCAACCATGATGATGA+TGG | 0.493023 | 2_4:-16494471 | Msa0318160:CDS |
| ACCTGACGCCAGCATGGTAA+TGG | 0.495679 | 2_4:+16491963 | None:intergenic |
| GCATTTGCAGGTTGACTCAC+AGG | 0.499062 | 2_4:+16492144 | None:intergenic |
| GTATGCGATGAAATAGATAT+AGG | 0.500381 | 2_4:+16492096 | None:intergenic |
| CAATCGACTGTTCCCACCAT+TGG | 0.501841 | 2_4:-16492816 | Msa0318160:CDS |
| AGAAATCTTTCAATCATGAT+GGG | 0.503765 | 2_4:-16493034 | Msa0318160:CDS |
| CAACTTACCATCTTCTATGC+GGG | 0.506683 | 2_4:-16492637 | Msa0318160:CDS |
| TATGAAGCTGCCACTGCTTG+GGG | 0.507716 | 2_4:-16492859 | Msa0318160:CDS |
| AGGCTATCATGTTGTTGGCT+AGG | 0.509440 | 2_4:-16492230 | Msa0318160:CDS |
| TCCAGCAACGGCACCAATGG+TGG | 0.513212 | 2_4:+16492803 | None:intergenic |
| GCAGTTGCAAAATGATTCCT+CGG | 0.514736 | 2_4:+16492906 | None:intergenic |
| CCGCATAGAAGATGGTAAGT+TGG | 0.523235 | 2_4:+16492638 | None:intergenic |
| ATCATGTTGTTGGCTAGGAA+TGG | 0.531486 | 2_4:-16492225 | Msa0318160:CDS |
| TTAAATAGTTTCATAAGGGT+AGG | 0.532445 | 2_4:+16491362 | None:intergenic |
| GACAGTACCCGCATAGAAGA+TGG | 0.534138 | 2_4:+16492630 | None:intergenic |
| AGAGAGATACCTTGTCAGAA+GGG | 0.541971 | 2_4:+16492590 | None:intergenic |
| AGTAAATGCCATTACCATGC+TGG | 0.547226 | 2_4:-16491971 | Msa0318160:CDS |
| ACTCACAGGCACACCATCAC+CGG | 0.549268 | 2_4:+16492158 | None:intergenic |
| TATGTTAATTCAAAGGTCAA+AGG | 0.549457 | 2_4:-16491227 | Msa0318160:three_prime_UTR |
| CATTCCAGCAACGGCACCAA+TGG | 0.550185 | 2_4:+16492800 | None:intergenic |
| AAAGTTCAGGCACCCGGTGA+TGG | 0.551855 | 2_4:-16492171 | Msa0318160:CDS |
| AGTTGGGAAGAATGCAGAGA+TGG | 0.555952 | 2_4:+16492655 | None:intergenic |
| GCAGATACTTTGTTGGAGAA+GGG | 0.556289 | 2_4:+16493647 | None:intergenic |
| TGCATGATCCATCATCATCA+TGG | 0.557307 | 2_4:+16494463 | None:intergenic |
| AAGAGAGATACCTTGTCAGA+AGG | 0.557442 | 2_4:+16492589 | None:intergenic |
| CTCACAGGCACACCATCACC+GGG | 0.558809 | 2_4:+16492159 | None:intergenic |
| GGCATAGCTAACAGGAGTGG+TGG | 0.561266 | 2_4:+16492005 | None:intergenic |
| CTATGTTACTGCTAAGGAGG+AGG | 0.565981 | 2_4:-16494493 | Msa0318160:CDS |
| ACTGGTGCACAGTCAGGCAG+TGG | 0.578273 | 2_4:-16492075 | Msa0318160:CDS |
| ACTACTCTATGTTACTGCTA+AGG | 0.583808 | 2_4:-16494499 | Msa0318160:CDS |
| GTTAATTCAAAGGTCAAAGG+TGG | 0.585730 | 2_4:-16491224 | Msa0318160:three_prime_UTR |
| GGCTAGGAATGGCGTATCAG+TGG | 0.588783 | 2_4:-16492214 | Msa0318160:CDS |
| ATGCAGCTATACCTCAGGCT+CGG | 0.589752 | 2_4:-16491754 | Msa0318160:intron |
| TGAAGCTGCCACTGCTTGGG+GGG | 0.595685 | 2_4:-16492857 | Msa0318160:CDS |
| CATTGATGAACTCATTCCCG+AGG | 0.598073 | 2_4:-16492923 | Msa0318160:CDS |
| GATGAAATAGATATAGGACT+TGG | 0.598998 | 2_4:+16492102 | None:intergenic |
| CGATGACATCCCTTCTGACA+AGG | 0.602176 | 2_4:-16492599 | Msa0318160:intron |
| CAGTTGCAAAATGATTCCTC+GGG | 0.602887 | 2_4:+16492907 | None:intergenic |
| ATGAAGCTGCCACTGCTTGG+GGG | 0.607447 | 2_4:-16492858 | Msa0318160:CDS |
| ACTCTATGTTACTGCTAAGG+AGG | 0.607768 | 2_4:-16494496 | Msa0318160:CDS |
| CAGACAAAAGTTCAGGCACC+CGG | 0.611720 | 2_4:-16492177 | Msa0318160:CDS |
| TGATTCAGCCATTCCAGCAA+CGG | 0.615125 | 2_4:+16492791 | None:intergenic |
| AATACTCTCTCAGCCAAGCA+AGG | 0.617603 | 2_4:-16491394 | Msa0318160:three_prime_UTR |
| TCTTTCAATCATGATGGGCA+AGG | 0.623986 | 2_4:-16493029 | Msa0318160:CDS |
| ACTGCTGGTCAGAATATGAA+TGG | 0.624912 | 2_4:-16492888 | Msa0318160:CDS |
| GCATAGCTAACAGGAGTGGT+GGG | 0.626136 | 2_4:+16492006 | None:intergenic |
| AGGACTTGGATGACCAGAGG+AGG | 0.630995 | 2_4:+16492116 | None:intergenic |
| ACCTCAAAAGACATCAAATG+TGG | 0.632234 | 2_4:+16493617 | None:intergenic |
| CCAGCAACGGCACCAATGGT+GGG | 0.634359 | 2_4:+16492804 | None:intergenic |
| CAACATACCTGACGCCAGCA+TGG | 0.637412 | 2_4:+16491957 | None:intergenic |
| GGACTTGGATGACCAGAGGA+GGG | 0.638831 | 2_4:+16492117 | None:intergenic |
| AAGGATGCTTTCCGAGCCTG+AGG | 0.641286 | 2_4:+16491743 | None:intergenic |
| TTCAATCATGATGGGCAAGG+TGG | 0.642760 | 2_4:-16493026 | Msa0318160:CDS |
| GTATGTGTAGGCTTCACAAA+GGG | 0.645767 | 2_4:-16493686 | Msa0318160:intron |
| GATGGATCATGCAAACACTC+TGG | 0.653555 | 2_4:-16494453 | Msa0318160:intron |
| GGTATGTGTAGGCTTCACAA+AGG | 0.658479 | 2_4:-16493687 | Msa0318160:intron |
| CTCGGCATAGCTAACAGGAG+TGG | 0.663934 | 2_4:+16492002 | None:intergenic |
| ATGGTGGGAACAGTCGATTG+AGG | 0.669123 | 2_4:+16492819 | None:intergenic |
| CCAACTTACCATCTTCTATG+CGG | 0.674088 | 2_4:-16492638 | Msa0318160:CDS |
| AAAATGGTGAGAGATTTCAT+GGG | 0.682366 | 2_4:-16494543 | Msa0318160:CDS |
| CTTGGATGACCAGAGGAGGG+TGG | 0.682495 | 2_4:+16492120 | None:intergenic |
| TATAGGACTTGGATGACCAG+AGG | 0.688185 | 2_4:+16492113 | None:intergenic |
| CAAAGGGTTCGGGTGCACAG+TGG | 0.716874 | 2_4:-16493670 | Msa0318160:CDS |
| TGTACTGCTTCATAACACAA+CGG | 0.760860 | 2_4:-16491445 | Msa0318160:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATTCATTTATTTATTTAT+AGG | + | chr2_4:16493232-16493251 | None:intergenic | 10.0% |
| !! | TAAATAAATAAATGAATACA+AGG | - | chr2_4:16493233-16493252 | Msa0318160:intron | 10.0% |
| !! | CTTCATAAAATAAACAAAAT+TGG | + | chr2_4:16491595-16491614 | None:intergenic | 15.0% |
| !!! | TTTAAAAATTTTGACATGAT+TGG | + | chr2_4:16492002-16492021 | None:intergenic | 15.0% |
| !!! | TCTTTTAAATAGTTTCATAA+GGG | + | chr2_4:16494423-16494442 | None:intergenic | 15.0% |
| !!! | TTCTTTTAAATAGTTTCATA+AGG | + | chr2_4:16494424-16494443 | None:intergenic | 15.0% |
| !!! | TTTTTACTATGTTAATTCAA+AGG | - | chr2_4:16494544-16494563 | Msa0318160:exon | 15.0% |
| !! | ACATAGAAAGAAACAAAAAA+CGG | + | chr2_4:16491379-16491398 | None:intergenic | 20.0% |
| !!! | TTCAAATTCAACTTTTGTAA+CGG | + | chr2_4:16491735-16491754 | None:intergenic | 20.0% |
| !!! | AGAATTGATTTTGAAATGTT+TGG | + | chr2_4:16491941-16491960 | None:intergenic | 20.0% |
| !!! | TGTAACTTTTTTTACATTGA+GGG | - | chr2_4:16492436-16492455 | Msa0318160:intron | 20.0% |
| !!! | TAATTTTATGATTGACTTTG+AGG | - | chr2_4:16493028-16493047 | Msa0318160:CDS | 20.0% |
| !! | TTTATTTATTTATAGGCAGA+AGG | + | chr2_4:16493225-16493244 | None:intergenic | 20.0% |
| !! | TAAATGAATACAAGGTAAAA+AGG | - | chr2_4:16493241-16493260 | Msa0318160:intron | 20.0% |
| !! | AAGGAATAAAATATGAATTG+TGG | + | chr2_4:16493267-16493286 | None:intergenic | 20.0% |
| !!! | TTTTTCATTAACCAAGTTAT+TGG | + | chr2_4:16493476-16493495 | None:intergenic | 20.0% |
| !! | TTAAATAGAAACGTTTGTAA+TGG | + | chr2_4:16493983-16494002 | None:intergenic | 20.0% |
| !!! | GTTTTACTTTTATCAAGAAA+AGG | + | chr2_4:16494104-16494123 | None:intergenic | 20.0% |
| !!! | AAAAGTAATTTGTGTAGAAA+GGG | + | chr2_4:16494155-16494174 | None:intergenic | 20.0% |
| !!! | AAAAAGTAATTTGTGTAGAA+AGG | + | chr2_4:16494156-16494175 | None:intergenic | 20.0% |
| !!! | TTGTTGTTTTCAATTTACAA+CGG | + | chr2_4:16494452-16494471 | None:intergenic | 20.0% |
| !!! | TCTATGATTTGTTTGGTTAA+CGG | - | chr2_4:16491420-16491439 | Msa0318160:three_prime_UTR | 25.0% |
| !!! | TCATGAGTGTTTAATTTGAT+TGG | - | chr2_4:16491475-16491494 | Msa0318160:CDS | 25.0% |
| ! | ACATATGTCTCATATAAAAG+TGG | - | chr2_4:16491808-16491827 | Msa0318160:intron | 25.0% |
| ! | TCAAGGTTAAAATCAATTGT+AGG | - | chr2_4:16491844-16491863 | Msa0318160:intron | 25.0% |
| !! | TTTTATCCCTTAAAGTTTAG+TGG | - | chr2_4:16492027-16492046 | Msa0318160:CDS | 25.0% |
| ! | TTTATCCCTTAAAGTTTAGT+GGG | - | chr2_4:16492028-16492047 | Msa0318160:CDS | 25.0% |
| !!! | GTGTAACTTTTTTTACATTG+AGG | - | chr2_4:16492435-16492454 | Msa0318160:intron | 25.0% |
| ! | GTTTATGAACATGTAACATT+TGG | - | chr2_4:16492496-16492515 | Msa0318160:intron | 25.0% |
| ! | AATGACAAACAATCAATAGA+AGG | + | chr2_4:16492717-16492736 | None:intergenic | 25.0% |
| ! | TAGAAATCTTTCAATCATGA+TGG | - | chr2_4:16492743-16492762 | Msa0318160:intron | 25.0% |
| ! | AGAAATCTTTCAATCATGAT+GGG | - | chr2_4:16492744-16492763 | Msa0318160:intron | 25.0% |
| ! | ACTTGGTTAATGAAAAAACT+TGG | - | chr2_4:16493479-16493498 | Msa0318160:intron | 25.0% |
| ! | TTGTTTACTGATATCTTCTT+TGG | - | chr2_4:16493879-16493898 | Msa0318160:intron | 25.0% |
| ! | TGTTTACTGATATCTTCTTT+GGG | - | chr2_4:16493880-16493899 | Msa0318160:intron | 25.0% |
| ! | TAATAACTCAATACTGCAAA+TGG | + | chr2_4:16493945-16493964 | None:intergenic | 25.0% |
| ! | GATTTCTTGTTAACGTTATA+TGG | + | chr2_4:16494306-16494325 | None:intergenic | 25.0% |
| ! | TAAATAGTTTCATAAGGGTA+GGG | + | chr2_4:16494418-16494437 | None:intergenic | 25.0% |
| ! | TTAAATAGTTTCATAAGGGT+AGG | + | chr2_4:16494419-16494438 | None:intergenic | 25.0% |
| !! | AAGTACCTTAATACATTTTG+TGG | - | chr2_4:16494514-16494533 | Msa0318160:CDS | 25.0% |
| ! | TTACACCACAAAATGTATTA+AGG | + | chr2_4:16494522-16494541 | None:intergenic | 25.0% |
| ! | TATGTTAATTCAAAGGTCAA+AGG | - | chr2_4:16494551-16494570 | Msa0318160:exon | 25.0% |
| AAAATGGTGAGAGATTTCAT+GGG | - | chr2_4:16491235-16491254 | Msa0318160:three_prime_UTR | 30.0% | |
| AAGTACTTTCCAATCATGTT+TGG | - | chr2_4:16491349-16491368 | Msa0318160:three_prime_UTR | 30.0% | |
| !! | TGCAACTTCTATGATTTGTT+TGG | - | chr2_4:16491413-16491432 | Msa0318160:three_prime_UTR | 30.0% |
| !! | TGAGTGTTTAATTTGATTGG+TGG | - | chr2_4:16491478-16491497 | Msa0318160:CDS | 30.0% |
| GTGTGTTAAATTTGTGATTC+CGG | - | chr2_4:16491545-16491564 | Msa0318160:intron | 30.0% | |
| TGTGTTAAATTTGTGATTCC+GGG | - | chr2_4:16491546-16491565 | Msa0318160:intron | 30.0% | |
| ! | AGTTGACAACAAATTTTTCC+CGG | + | chr2_4:16491567-16491586 | None:intergenic | 30.0% |
| ATCAGTTTGACAAAATTAGG+TGG | + | chr2_4:16491671-16491690 | None:intergenic | 30.0% | |
| ! | CCTAATTTTGTCAAACTGAT+CGG | - | chr2_4:16491671-16491690 | Msa0318160:intron | 30.0% |
| ! | CTAATTTTGTCAAACTGATC+GGG | - | chr2_4:16491672-16491691 | Msa0318160:intron | 30.0% |
| ! | GTGGATTGAACAATAAATCA+AGG | - | chr2_4:16491827-16491846 | Msa0318160:intron | 30.0% |
| !!! | GACATGATTGGTTTAACTTT+TGG | + | chr2_4:16491990-16492009 | None:intergenic | 30.0% |
| TTATCCCTTAAAGTTTAGTG+GGG | - | chr2_4:16492029-16492048 | Msa0318160:CDS | 30.0% | |
| AATTCCCCACTAAACTTTAA+GGG | + | chr2_4:16492036-16492055 | None:intergenic | 30.0% | |
| TAATTCCCCACTAAACTTTA+AGG | + | chr2_4:16492037-16492056 | None:intergenic | 30.0% | |
| ATAAAACCAGCAGATGTTAT+GGG | + | chr2_4:16492221-16492240 | None:intergenic | 30.0% | |
| !! | GTATCGTTTTTAATGATCGA+CGG | - | chr2_4:16492396-16492415 | Msa0318160:intron | 30.0% |
| CTTCTAACTTCTAATCTGTT+TGG | - | chr2_4:16492538-16492557 | Msa0318160:intron | 30.0% | |
| CAAACAATCAATAGAAGGAA+GGG | + | chr2_4:16492712-16492731 | None:intergenic | 30.0% | |
| ACAAACAATCAATAGAAGGA+AGG | + | chr2_4:16492713-16492732 | None:intergenic | 30.0% | |
| ATATCATGTTGTACAGGATA+TGG | + | chr2_4:16492797-16492816 | None:intergenic | 30.0% | |
| ATCTTCATATCATGTTGTAC+AGG | + | chr2_4:16492803-16492822 | None:intergenic | 30.0% | |
| GATGAAATAGATATAGGACT+TGG | + | chr2_4:16493679-16493698 | None:intergenic | 30.0% | |
| GTATGCGATGAAATAGATAT+AGG | + | chr2_4:16493685-16493704 | None:intergenic | 30.0% | |
| ATATCTATTTCATCGCATAC+TGG | - | chr2_4:16493685-16493704 | Msa0318160:intron | 30.0% | |
| !!! | ATGGTAATGGCATTTACTTT+TGG | + | chr2_4:16493805-16493824 | None:intergenic | 30.0% |
| GTTTACTGATATCTTCTTTG+GGG | - | chr2_4:16493881-16493900 | Msa0318160:intron | 30.0% | |
| GGTATAGCTGCATAAAAAAT+TGG | + | chr2_4:16494017-16494036 | None:intergenic | 30.0% | |
| !! | CTTTTCTAAAAATCGAGTCA+AGG | + | chr2_4:16494057-16494076 | None:intergenic | 30.0% |
| ATATTACCCCACAATTTGAA+GGG | + | chr2_4:16494184-16494203 | None:intergenic | 30.0% | |
| TCATTTAGTATTGTGTTTGC+AGG | - | chr2_4:16494265-16494284 | Msa0318160:intron | 30.0% | |
| CATTTAGTATTGTGTTTGCA+GGG | - | chr2_4:16494266-16494285 | Msa0318160:intron | 30.0% | |
| ! | CATTTTCAGAGACAAAGGAA+AGG | + | chr2_4:16491221-16491240 | None:intergenic | 35.0% |
| ! | CTTTCCTTTGTCTCTGAAAA+TGG | - | chr2_4:16491219-16491238 | Msa0318160:three_prime_UTR | 35.0% |
| GAAAATGGTGAGAGATTTCA+TGG | - | chr2_4:16491234-16491253 | Msa0318160:three_prime_UTR | 35.0% | |
| ACTACTCTATGTTACTGCTA+AGG | - | chr2_4:16491279-16491298 | Msa0318160:three_prime_UTR | 35.0% | |
| ! | GAAATCAACCATGATGATGA+TGG | - | chr2_4:16491307-16491326 | Msa0318160:three_prime_UTR | 35.0% |
| AACGGTTATCCAAACATGAT+TGG | + | chr2_4:16491361-16491380 | None:intergenic | 35.0% | |
| CCGATCAGTTTGACAAAATT+AGG | + | chr2_4:16491674-16491693 | None:intergenic | 35.0% | |
| ! | ACCACATTTGATGTCTTTTG+AGG | - | chr2_4:16492160-16492179 | Msa0318160:CDS | 35.0% |
| ACCTCAAAAGACATCAAATG+TGG | + | chr2_4:16492164-16492183 | None:intergenic | 35.0% | |
| CATAAAACCAGCAGATGTTA+TGG | + | chr2_4:16492222-16492241 | None:intergenic | 35.0% | |
| TTAATGATCGACGGTTATGA+TGG | - | chr2_4:16492405-16492424 | Msa0318160:intron | 35.0% | |
| AGTTAGAAGTTAGAACACAC+TGG | + | chr2_4:16492527-16492546 | None:intergenic | 35.0% | |
| AATCAATAGAAGGAAGGGAA+AGG | + | chr2_4:16492707-16492726 | None:intergenic | 35.0% | |
| TGAAACTGAATTCGCTTGAT+TGG | + | chr2_4:16492837-16492856 | None:intergenic | 35.0% | |
| ATAGGGAAAAAATGGTTGAG+AGG | - | chr2_4:16493378-16493397 | Msa0318160:intron | 35.0% | |
| ATTAAGCTTGACTATGGTCA+AGG | + | chr2_4:16493505-16493524 | None:intergenic | 35.0% | |
| ACCATAGTCAAGCTTAATTG+TGG | - | chr2_4:16493507-16493526 | Msa0318160:intron | 35.0% | |
| ! | AATTGTGGCACTATTTCTTC+AGG | - | chr2_4:16493522-16493541 | Msa0318160:CDS | 35.0% |
| TTTCTCGCAGTTAAAACAAC+TGG | - | chr2_4:16493745-16493764 | Msa0318160:intron | 35.0% | |
| !! | GTAATGGCATTTACTTTTGG+AGG | + | chr2_4:16493802-16493821 | None:intergenic | 35.0% |
| CTAACTGCAGTAATGAGAAA+TGG | + | chr2_4:16493853-16493872 | None:intergenic | 35.0% | |
| ! | TTTTTATGCAGCTATACCTC+AGG | - | chr2_4:16494019-16494038 | Msa0318160:intron | 35.0% |
| !! | TCGATTTTTAGAAAAGCGCA+AGG | - | chr2_4:16494061-16494080 | Msa0318160:intron | 35.0% |
| TAGTTACCATGCTAGACTTA+AGG | - | chr2_4:16494125-16494144 | Msa0318160:intron | 35.0% | |
| AGTTACCATGCTAGACTTAA+GGG | - | chr2_4:16494126-16494145 | Msa0318160:intron | 35.0% | |
| TATTACCCCACAATTTGAAG+GGG | + | chr2_4:16494183-16494202 | None:intergenic | 35.0% | |
| CATATTACCCCACAATTTGA+AGG | + | chr2_4:16494185-16494204 | None:intergenic | 35.0% | |
| TCAAATTGTGGGGTAATATG+AGG | - | chr2_4:16494185-16494204 | Msa0318160:intron | 35.0% | |
| TGTACTGCTTCATAACACAA+CGG | - | chr2_4:16494333-16494352 | Msa0318160:intron | 35.0% | |
| GTTAATTCAAAGGTCAAAGG+TGG | - | chr2_4:16494554-16494573 | Msa0318160:exon | 35.0% | |
| ! | CTCACCATTTTCAGAGACAA+AGG | + | chr2_4:16491226-16491245 | None:intergenic | 40.0% |
| ACTCTATGTTACTGCTAAGG+AGG | - | chr2_4:16491282-16491301 | Msa0318160:three_prime_UTR | 40.0% | |
| TGCATGATCCATCATCATCA+TGG | + | chr2_4:16491318-16491337 | None:intergenic | 40.0% | |
| CTCATGAATGTTTGCATGCA+TGG | + | chr2_4:16491462-16491481 | None:intergenic | 40.0% | |
| !! | AGTGGGGAATTAACTTGTTC+TGG | - | chr2_4:16492045-16492064 | Msa0318160:CDS | 40.0% |
| GTATGTGTAGGCTTCACAAA+GGG | - | chr2_4:16492092-16492111 | Msa0318160:CDS | 40.0% | |
| GCAGATACTTTGTTGGAGAA+GGG | + | chr2_4:16492134-16492153 | None:intergenic | 40.0% | |
| AGCAGATACTTTGTTGGAGA+AGG | + | chr2_4:16492135-16492154 | None:intergenic | 40.0% | |
| TTGAGCAGCAGATACTTTGT+TGG | + | chr2_4:16492141-16492160 | None:intergenic | 40.0% | |
| TTACTAGAGTCAAATGCGTC+TGG | + | chr2_4:16492248-16492267 | None:intergenic | 40.0% | |
| !! | TCTTTCAATCATGATGGGCA+AGG | - | chr2_4:16492749-16492768 | Msa0318160:intron | 40.0% |
| CAGTTGCAAAATGATTCCTC+GGG | + | chr2_4:16492874-16492893 | None:intergenic | 40.0% | |
| GCAGTTGCAAAATGATTCCT+CGG | + | chr2_4:16492875-16492894 | None:intergenic | 40.0% | |
| ! | AGGAATCATTTTGCAACTGC+TGG | - | chr2_4:16492875-16492894 | Msa0318160:CDS | 40.0% |
| ACTGCTGGTCAGAATATGAA+TGG | - | chr2_4:16492890-16492909 | Msa0318160:CDS | 40.0% | |
| CGCATAGAAGATGGTAAGTT+GGG | + | chr2_4:16493142-16493161 | None:intergenic | 40.0% | |
| CCAACTTACCATCTTCTATG+CGG | - | chr2_4:16493140-16493159 | Msa0318160:intron | 40.0% | |
| CAACTTACCATCTTCTATGC+GGG | - | chr2_4:16493141-16493160 | Msa0318160:intron | 40.0% | |
| AGAGAGATACCTTGTCAGAA+GGG | + | chr2_4:16493191-16493210 | None:intergenic | 40.0% | |
| AAGAGAGATACCTTGTCAGA+AGG | + | chr2_4:16493192-16493211 | None:intergenic | 40.0% | |
| !! | CAATGTAATGTTGGTGATCG+AGG | + | chr2_4:16493300-16493319 | None:intergenic | 40.0% |
| CTCGATCACCAACATTACAT+TGG | - | chr2_4:16493298-16493317 | Msa0318160:intron | 40.0% | |
| !!! | CCATTTTTTCCCTATCCACA+AGG | + | chr2_4:16493373-16493392 | None:intergenic | 40.0% |
| CCTTGTGGATAGGGAAAAAA+TGG | - | chr2_4:16493370-16493389 | Msa0318160:intron | 40.0% | |
| GCCACAATTAAGCTTGACTA+TGG | + | chr2_4:16493511-16493530 | None:intergenic | 40.0% | |
| ! | ATCATGTTGTTGGCTAGGAA+TGG | - | chr2_4:16493553-16493572 | Msa0318160:CDS | 40.0% |
| CATAGCACAGACAAAAGTTC+AGG | - | chr2_4:16493594-16493613 | Msa0318160:CDS | 40.0% | |
| AGTAAATGCCATTACCATGC+TGG | - | chr2_4:16493807-16493826 | Msa0318160:intron | 40.0% | |
| !! | TTTTAGAAAAGCGCAAGGAG+AGG | - | chr2_4:16494066-16494085 | Msa0318160:intron | 40.0% |
| ! | TTTTGTGCCCCTTCAAATTG+TGG | - | chr2_4:16494173-16494192 | Msa0318160:intron | 40.0% |
| TTTGTGCCCCTTCAAATTGT+GGG | - | chr2_4:16494174-16494193 | Msa0318160:intron | 40.0% | |
| TAGGGACTATTATCCTTGCT+TGG | + | chr2_4:16494400-16494419 | None:intergenic | 40.0% | |
| CTATGTTACTGCTAAGGAGG+AGG | - | chr2_4:16491285-16491304 | Msa0318160:three_prime_UTR | 45.0% | |
| GATGGATCATGCAAACACTC+TGG | - | chr2_4:16491325-16491344 | Msa0318160:three_prime_UTR | 45.0% | |
| !! | CTTGTTCTGGCTTGTGTTGA+TGG | - | chr2_4:16492058-16492077 | Msa0318160:CDS | 45.0% |
| GGTATGTGTAGGCTTCACAA+AGG | - | chr2_4:16492091-16492110 | Msa0318160:CDS | 45.0% | |
| TGTAGGCTTCACAAAGGGTT+CGG | - | chr2_4:16492097-16492116 | Msa0318160:CDS | 45.0% | |
| TCTGATCCCATAACATCTGC+TGG | - | chr2_4:16492212-16492231 | Msa0318160:CDS | 45.0% | |
| AAAGGGTAGCATCAAACCTG+AGG | + | chr2_4:16492290-16492309 | None:intergenic | 45.0% | |
| CAGGTTTGATGCTACCCTTT+CGG | - | chr2_4:16492290-16492309 | Msa0318160:intron | 45.0% | |
| ! | AAGCCTAAACAGCACCGAAA+GGG | + | chr2_4:16492307-16492326 | None:intergenic | 45.0% |
| ! | AAAGCCTAAACAGCACCGAA+AGG | + | chr2_4:16492308-16492327 | None:intergenic | 45.0% |
| !! | TTCAATCATGATGGGCAAGG+TGG | - | chr2_4:16492752-16492771 | Msa0318160:intron | 45.0% |
| CATTGATGAACTCATTCCCG+AGG | - | chr2_4:16492855-16492874 | Msa0318160:CDS | 45.0% | |
| AATATGAAGCTGCCACTGCT+TGG | - | chr2_4:16492917-16492936 | Msa0318160:CDS | 45.0% | |
| ATATGAAGCTGCCACTGCTT+GGG | - | chr2_4:16492918-16492937 | Msa0318160:CDS | 45.0% | |
| TGATTCAGCCATTCCAGCAA+CGG | + | chr2_4:16492990-16493009 | None:intergenic | 45.0% | |
| AGTTGGGAAGAATGCAGAGA+TGG | + | chr2_4:16493126-16493145 | None:intergenic | 45.0% | |
| CCGCATAGAAGATGGTAAGT+TGG | + | chr2_4:16493143-16493162 | None:intergenic | 45.0% | |
| CACTCGGACCAATGTAATGT+TGG | + | chr2_4:16493309-16493328 | None:intergenic | 45.0% | |
| TACATTGGTCCGAGTGAAAC+CGG | - | chr2_4:16493313-16493332 | Msa0318160:intron | 45.0% | |
| GATCCCTTAAGCTAGGTCTT+GGG | - | chr2_4:16493341-16493360 | Msa0318160:intron | 45.0% | |
| GAACCCAAGACCTAGCTTAA+GGG | + | chr2_4:16493347-16493366 | None:intergenic | 45.0% | |
| GTTGGATCGCACCAATAACT+TGG | - | chr2_4:16493462-16493481 | Msa0318160:intron | 45.0% | |
| ! | AGGCTATCATGTTGTTGGCT+AGG | - | chr2_4:16493548-16493567 | Msa0318160:CDS | 45.0% |
| TATAGGACTTGGATGACCAG+AGG | + | chr2_4:16493668-16493687 | None:intergenic | 45.0% | |
| !! | GGCATTTACTTTTGGAGGCT+CGG | + | chr2_4:16493797-16493816 | None:intergenic | 45.0% |
| TTGTGCCCCTTCAAATTGTG+GGG | - | chr2_4:16494175-16494194 | Msa0318160:intron | 45.0% | |
| AATACTCTCTCAGCCAAGCA+AGG | - | chr2_4:16494384-16494403 | Msa0318160:intron | 45.0% | |
| TTCAAAGGTCAAAGGTGGAC+TGG | - | chr2_4:16494559-16494578 | Msa0318160:exon | 45.0% | |
| !!! | AATTATTTTATTTTAATTTG+AGG | + | chr2_4:16492608-16492627 | None:intergenic | 5.0% |
| !! | TTGTGTTGATGGCTGCTGTG+TGG | - | chr2_4:16492069-16492088 | Msa0318160:CDS | 50.0% |
| !! | TGTGTTGATGGCTGCTGTGT+GGG | - | chr2_4:16492070-16492089 | Msa0318160:CDS | 50.0% |
| GTAGGCTTCACAAAGGGTTC+GGG | - | chr2_4:16492098-16492117 | Msa0318160:CDS | 50.0% | |
| !! | CTACCCTTTCGGTGCTGTTT+AGG | - | chr2_4:16492301-16492320 | Msa0318160:intron | 50.0% |
| TATGAAGCTGCCACTGCTTG+GGG | - | chr2_4:16492919-16492938 | Msa0318160:CDS | 50.0% | |
| !! | GTCGATTGAGGTGCTGTAAC+AGG | + | chr2_4:16492950-16492969 | None:intergenic | 50.0% |
| ! | ATGGTGGGAACAGTCGATTG+AGG | + | chr2_4:16492962-16492981 | None:intergenic | 50.0% |
| CAATCGACTGTTCCCACCAT+TGG | - | chr2_4:16492962-16492981 | Msa0318160:CDS | 50.0% | |
| GACAGTACCCGCATAGAAGA+TGG | + | chr2_4:16493151-16493170 | None:intergenic | 50.0% | |
| CGATGACATCCCTTCTGACA+AGG | - | chr2_4:16493179-16493198 | Msa0318160:intron | 50.0% | |
| !! | TGATCGAGGTCAAGTTGGCA+AGG | + | chr2_4:16493286-16493305 | None:intergenic | 50.0% |
| !! | GTTGGTGATCGAGGTCAAGT+TGG | + | chr2_4:16493291-16493310 | None:intergenic | 50.0% |
| TAGCTTAAGGGATCCGAGTC+CGG | + | chr2_4:16493335-16493354 | None:intergenic | 50.0% | |
| GGATCCCTTAAGCTAGGTCT+TGG | - | chr2_4:16493340-16493359 | Msa0318160:intron | 50.0% | |
| CGAACCCAAGACCTAGCTTA+AGG | + | chr2_4:16493348-16493367 | None:intergenic | 50.0% | |
| GAGAGGATAGACCCATCTGA+AGG | - | chr2_4:16493395-16493414 | Msa0318160:intron | 50.0% | |
| AGGATAGACCCATCTGAAGG+TGG | - | chr2_4:16493398-16493417 | Msa0318160:intron | 50.0% | |
| ATGGCTGACCACCTTCAGAT+GGG | + | chr2_4:16493409-16493428 | None:intergenic | 50.0% | |
| !! | CTCATGGCTAGTCTCTGTTC+GGG | + | chr2_4:16493435-16493454 | None:intergenic | 50.0% |
| !! | GCTCATGGCTAGTCTCTGTT+CGG | + | chr2_4:16493436-16493455 | None:intergenic | 50.0% |
| CTAGCCATGAGCAAAGTCGT+TGG | - | chr2_4:16493444-16493463 | Msa0318160:intron | 50.0% | |
| CGATCCAACGACTTTGCTCA+TGG | + | chr2_4:16493451-16493470 | None:intergenic | 50.0% | |
| ! | GGCACTATTTCTTCAGGCAC+AGG | - | chr2_4:16493528-16493547 | Msa0318160:CDS | 50.0% |
| GGCACAGGCTATCATGTTGT+TGG | - | chr2_4:16493543-16493562 | Msa0318160:CDS | 50.0% | |
| CAGACAAAAGTTCAGGCACC+CGG | - | chr2_4:16493601-16493620 | Msa0318160:CDS | 50.0% | |
| ! | GCATTTGCAGGTTGACTCAC+AGG | + | chr2_4:16493637-16493656 | None:intergenic | 50.0% |
| GCATAGCTAACAGGAGTGGT+GGG | + | chr2_4:16493775-16493794 | None:intergenic | 50.0% | |
| ATGCAGCTATACCTCAGGCT+CGG | - | chr2_4:16494024-16494043 | Msa0318160:intron | 50.0% | |
| GGTTGCCCTTAAGTCTAGCA+TGG | + | chr2_4:16494134-16494153 | None:intergenic | 50.0% | |
| ACACTCGCTACGCGCATGTT+TGG | + | chr2_4:16491703-16491722 | None:intergenic | 55.0% | |
| ACATGCGCGTAGCGAGTGTT+TGG | - | chr2_4:16491704-16491723 | Msa0318160:intron | 55.0% | |
| GCTGCTGTGTGGGTATGTGT+AGG | - | chr2_4:16492080-16492099 | Msa0318160:CDS | 55.0% | |
| ACTCTCTGCTGCTGAACCTC+AGG | - | chr2_4:16492271-16492290 | Msa0318160:intron | 55.0% | |
| ATGAAGCTGCCACTGCTTGG+GGG | - | chr2_4:16492920-16492939 | Msa0318160:CDS | 55.0% | |
| CATTCCAGCAACGGCACCAA+TGG | + | chr2_4:16492981-16493000 | None:intergenic | 55.0% | |
| !! | CATTGGTGCCGTTGCTGGAA+TGG | - | chr2_4:16492979-16492998 | Msa0318160:CDS | 55.0% |
| GATCCGAGTCCGGTTTCACT+CGG | + | chr2_4:16493325-16493344 | None:intergenic | 55.0% | |
| GGACTCGGATCCCTTAAGCT+AGG | - | chr2_4:16493334-16493353 | Msa0318160:intron | 55.0% | |
| ! | TGGGTTCGAGCCTTGTGGAT+AGG | - | chr2_4:16493360-16493379 | Msa0318160:intron | 55.0% |
| ! | GGGTTCGAGCCTTGTGGATA+GGG | - | chr2_4:16493361-16493380 | Msa0318160:intron | 55.0% |
| CATGGCTGACCACCTTCAGA+TGG | + | chr2_4:16493410-16493429 | None:intergenic | 55.0% | |
| CTAGTCTCTGTTCGGGAGCA+TGG | + | chr2_4:16493428-16493447 | None:intergenic | 55.0% | |
| GGCTAGGAATGGCGTATCAG+TGG | - | chr2_4:16493564-16493583 | Msa0318160:CDS | 55.0% | |
| AAAGTTCAGGCACCCGGTGA+TGG | - | chr2_4:16493607-16493626 | Msa0318160:CDS | 55.0% | |
| ACTCACAGGCACACCATCAC+CGG | + | chr2_4:16493623-16493642 | None:intergenic | 55.0% | |
| GGACTTGGATGACCAGAGGA+GGG | + | chr2_4:16493664-16493683 | None:intergenic | 55.0% | |
| AGGACTTGGATGACCAGAGG+AGG | + | chr2_4:16493665-16493684 | None:intergenic | 55.0% | |
| TCGCATACTGGTGCACAGTC+AGG | - | chr2_4:16493697-16493716 | Msa0318160:intron | 55.0% | |
| GGCATAGCTAACAGGAGTGG+TGG | + | chr2_4:16493776-16493795 | None:intergenic | 55.0% | |
| CTCGGCATAGCTAACAGGAG+TGG | + | chr2_4:16493779-16493798 | None:intergenic | 55.0% | |
| ACCTGACGCCAGCATGGTAA+TGG | + | chr2_4:16493818-16493837 | None:intergenic | 55.0% | |
| CAACATACCTGACGCCAGCA+TGG | + | chr2_4:16493824-16493843 | None:intergenic | 55.0% | |
| CATGCTGGCGTCAGGTATGT+TGG | - | chr2_4:16493822-16493841 | Msa0318160:intron | 55.0% | |
| AAGGATGCTTTCCGAGCCTG+AGG | + | chr2_4:16494038-16494057 | None:intergenic | 55.0% | |
| CAAAGGGTTCGGGTGCACAG+TGG | - | chr2_4:16492108-16492127 | Msa0318160:CDS | 60.0% | |
| TGAAGCTGCCACTGCTTGGG+GGG | - | chr2_4:16492921-16492940 | Msa0318160:CDS | 60.0% | |
| ACAGGTATCCCCCCAAGCAG+TGG | + | chr2_4:16492932-16492951 | None:intergenic | 60.0% | |
| CCAGCAACGGCACCAATGGT+GGG | + | chr2_4:16492977-16492996 | None:intergenic | 60.0% | |
| TCCAGCAACGGCACCAATGG+TGG | + | chr2_4:16492978-16492997 | None:intergenic | 60.0% | |
| GGTCCGAGTGAAACCGGACT+CGG | - | chr2_4:16493319-16493338 | Msa0318160:intron | 60.0% | |
| GGTCTTGGGTTCGAGCCTTG+TGG | - | chr2_4:16493355-16493374 | Msa0318160:intron | 60.0% | |
| CTCACAGGCACACCATCACC+GGG | + | chr2_4:16493622-16493641 | None:intergenic | 60.0% | |
| GAGGAGGGTGGTGCATTTGC+AGG | + | chr2_4:16493649-16493668 | None:intergenic | 60.0% | |
| GCAAATGCACCACCCTCCTC+TGG | - | chr2_4:16493649-16493668 | Msa0318160:CDS | 60.0% | |
| CTTGGATGACCAGAGGAGGG+TGG | + | chr2_4:16493661-16493680 | None:intergenic | 60.0% | |
| ACTGGTGCACAGTCAGGCAG+TGG | - | chr2_4:16493703-16493722 | Msa0318160:intron | 60.0% | |
| GGAGGCTCGGCATAGCTAAC+AGG | + | chr2_4:16493784-16493803 | None:intergenic | 60.0% | |
| GCCATTACCATGCTGGCGTC+AGG | - | chr2_4:16493814-16493833 | Msa0318160:intron | 60.0% | |
| !! | CCCACCATTGGTGCCGTTGC+TGG | - | chr2_4:16492974-16492993 | Msa0318160:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 16491204 | 16494596 | 16491204 | ID=Msa0318160;Name=Msa0318160 |
| chr2_4 | mRNA | 16491204 | 16494596 | 16491204 | ID=Msa0318160-mRNA-1;Parent=Msa0318160;Name=Msa0318160-mRNA-1;_AED=0.02;_eAED=0.02;_QI=34|1|1|1|0.83|0.85|7|249|354 |
| chr2_4 | exon | 16491204 | 16491513 | 16491204 | ID=Msa0318160-mRNA-1:exon:6194;Parent=Msa0318160-mRNA-1 |
| chr2_4 | exon | 16491713 | 16491770 | 16491713 | ID=Msa0318160-mRNA-1:exon:6193;Parent=Msa0318160-mRNA-1 |
| chr2_4 | exon | 16491965 | 16492256 | 16491965 | ID=Msa0318160-mRNA-1:exon:6192;Parent=Msa0318160-mRNA-1 |
| chr2_4 | exon | 16492600 | 16492687 | 16492600 | ID=Msa0318160-mRNA-1:exon:6191;Parent=Msa0318160-mRNA-1 |
| chr2_4 | exon | 16492789 | 16493054 | 16492789 | ID=Msa0318160-mRNA-1:exon:6190;Parent=Msa0318160-mRNA-1 |
| chr2_4 | exon | 16493508 | 16493698 | 16493508 | ID=Msa0318160-mRNA-1:exon:6189;Parent=Msa0318160-mRNA-1 |
| chr2_4 | exon | 16494454 | 16494596 | 16494454 | ID=Msa0318160-mRNA-1:exon:6188;Parent=Msa0318160-mRNA-1 |
| chr2_4 | five_prime_UTR | 16494563 | 16494596 | 16494563 | ID=Msa0318160-mRNA-1:five_prime_utr;Parent=Msa0318160-mRNA-1 |
| chr2_4 | CDS | 16494454 | 16494562 | 16494454 | ID=Msa0318160-mRNA-1:cds;Parent=Msa0318160-mRNA-1 |
| chr2_4 | CDS | 16493508 | 16493698 | 16493508 | ID=Msa0318160-mRNA-1:cds;Parent=Msa0318160-mRNA-1 |
| chr2_4 | CDS | 16492789 | 16493054 | 16492789 | ID=Msa0318160-mRNA-1:cds;Parent=Msa0318160-mRNA-1 |
| chr2_4 | CDS | 16492600 | 16492687 | 16492600 | ID=Msa0318160-mRNA-1:cds;Parent=Msa0318160-mRNA-1 |
| chr2_4 | CDS | 16491965 | 16492256 | 16491965 | ID=Msa0318160-mRNA-1:cds;Parent=Msa0318160-mRNA-1 |
| chr2_4 | CDS | 16491713 | 16491770 | 16491713 | ID=Msa0318160-mRNA-1:cds;Parent=Msa0318160-mRNA-1 |
| chr2_4 | CDS | 16491453 | 16491513 | 16491453 | ID=Msa0318160-mRNA-1:cds;Parent=Msa0318160-mRNA-1 |
| chr2_4 | three_prime_UTR | 16491204 | 16491452 | 16491204 | ID=Msa0318160-mRNA-1:three_prime_utr;Parent=Msa0318160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
