AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0323300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0323300 MtrunA17_Chr2g0277531 89.097 321 27 4 1 316 1 318 0.0 571
Msa0323300 MtrunA17_Chr2g0277461 72.973 370 85 8 10 369 4 368 0.0 522
Msa0323300 MtrunA17_Chr5g0424931 47.291 406 161 13 13 375 13 408 6.52e-101 308
Msa0323300 MtrunA17_Chr1g0178011 46.361 371 173 11 12 365 5 366 1.93e-96 295
Msa0323300 MtrunA17_Chr5g0417281 44.385 374 190 9 10 372 2 368 3.30e-96 296
Msa0323300 MtrunA17_Chr5g0436761 45.333 375 185 11 11 372 4 371 7.94e-87 270
Msa0323300 MtrunA17_Chr2g0289221 48.276 319 141 11 12 316 13 321 6.92e-84 259
Msa0323300 MtrunA17_Chr3g0115271 39.855 414 183 13 14 373 14 415 1.89e-82 263
Msa0323300 MtrunA17_Chr5g0424801 41.081 370 183 13 13 362 6 360 5.00e-82 255
Msa0323300 MtrunA17_Chr5g0424741 41.063 414 177 13 12 363 5 413 8.37e-81 256
Msa0323300 MtrunA17_Chr5g0425261 41.333 375 175 14 13 362 6 360 1.65e-80 251
Msa0323300 MtrunA17_Chr5g0417211 46.395 319 150 10 11 316 4 314 3.06e-79 249
Msa0323300 MtrunA17_Chr2g0326761 35.500 400 187 14 16 355 8 396 2.17e-64 217
Msa0323300 MtrunA17_Chr1g0181211 34.367 387 183 11 16 339 24 402 1.01e-61 210
Msa0323300 MtrunA17_Chr4g0028971 34.783 414 191 15 9 355 2 403 2.40e-61 209
Msa0323300 MtrunA17_Chr1g0199681 34.586 399 191 13 19 358 94 481 3.31e-58 201
Msa0323300 MtrunA17_Chr5g0419861 80.556 108 19 1 64 169 16 123 8.15e-55 176
Msa0323300 MtrunA17_Chr7g0264171 31.796 412 203 15 16 358 28 430 3.45e-51 180
Msa0323300 MtrunA17_Chr7g0264161 36.246 309 167 11 29 316 2 301 3.56e-48 165
Msa0323300 MtrunA17_Chr5g0425661 45.729 199 97 4 19 213 37 228 3.78e-48 163
Msa0323300 MtrunA17_Chr4g0070181 32.378 349 199 12 16 338 20 357 1.06e-41 156
Msa0323300 MtrunA17_Chr4g0009751 31.148 366 209 13 19 361 19 364 2.22e-40 150
Msa0323300 MtrunA17_Chr2g0276781 30.854 363 220 12 16 355 20 374 4.29e-40 150
Msa0323300 MtrunA17_Chr2g0282961 28.647 377 223 12 19 363 53 415 4.55e-39 147
Msa0323300 MtrunA17_Chr1g0156321 30.435 345 208 10 16 336 40 376 4.94e-39 148
Msa0323300 MtrunA17_Chr2g0285461 30.199 351 222 8 19 349 23 370 8.21e-39 147
Msa0323300 MtrunA17_Chr2g0301251 31.503 346 206 11 16 338 20 357 1.21e-38 147
Msa0323300 MtrunA17_Chr8g0385791 31.594 345 197 13 19 336 59 391 1.43e-38 147
Msa0323300 MtrunA17_Chr8g0376771 30.769 351 219 9 19 349 23 369 2.01e-38 146
Msa0323300 MtrunA17_Chr8g0389081 30.857 350 207 11 16 339 29 369 3.50e-38 145
Msa0323300 MtrunA17_Chr5g0433301 28.691 359 231 9 2 339 7 361 6.89e-38 145
Msa0323300 MtrunA17_Chr3g0109391 29.143 350 213 10 16 339 23 363 5.06e-37 142
Msa0323300 MtrunA17_Chr8g0346711 28.767 365 222 11 16 360 26 372 1.26e-35 137
Msa0323300 MtrunA17_Chr7g0239061 30.725 345 204 12 16 336 11 344 8.17e-35 135
Msa0323300 MtrunA17_Chr4g0046371 29.268 410 223 16 14 375 33 423 9.24e-35 135
Msa0323300 MtrunA17_Chr2g0326281 31.347 386 208 15 19 356 56 432 1.20e-34 135
Msa0323300 MtrunA17_Chr4g0029671 30.199 351 204 13 19 336 54 396 2.30e-30 122
Msa0323300 MtrunA17_Chr5g0424791 43.151 146 75 3 73 218 14 151 1.81e-24 97.8
Msa0323300 MtrunA17_Chr5g0425651 48.361 122 52 5 238 349 1 121 1.93e-24 97.1
Msa0323300 MtrunA17_Chr8g0356211 25.893 224 136 8 135 336 5 220 2.20e-14 73.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0323300 AT1G77850.2 36.203 395 191 11 15 358 15 399 2.17e-70 231
Msa0323300 AT1G77850.1 36.203 395 191 11 15 358 15 399 2.30e-70 231
Msa0323300 AT4G30080.1 35.263 380 181 10 16 339 16 386 1.81e-61 209
Msa0323300 AT2G28350.2 33.735 415 196 15 11 358 2 404 1.48e-57 199
Msa0323300 AT2G28350.1 33.735 415 196 15 11 358 2 404 2.05e-57 199
Msa0323300 AT4G23980.2 31.378 341 209 9 15 336 8 342 1.07e-44 163
Msa0323300 AT4G23980.1 31.378 341 209 9 15 336 8 342 1.45e-44 163
Msa0323300 AT1G34390.1 32.153 367 210 13 14 357 22 372 2.96e-43 159
Msa0323300 AT1G35540.1 32.514 366 212 13 14 357 22 374 4.41e-43 158
Msa0323300 AT1G34310.1 32.362 343 200 11 14 336 22 352 1.09e-42 157
Msa0323300 AT1G35520.1 32.065 368 211 13 14 357 22 374 1.30e-42 157
Msa0323300 AT2G33860.1 32.277 347 194 11 19 336 54 388 5.41e-42 155
Msa0323300 AT1G35240.1 30.959 365 219 12 14 357 22 374 5.48e-41 152
Msa0323300 AT2G46530.1 29.333 375 236 10 15 370 17 381 2.50e-40 150
Msa0323300 AT2G46530.3 29.333 375 236 10 15 370 38 402 2.80e-40 150
Msa0323300 AT5G20730.3 31.429 350 204 11 15 338 20 359 3.54e-39 149
Msa0323300 AT5G20730.1 31.429 350 204 11 15 338 20 359 3.87e-39 149
Msa0323300 AT5G37020.2 29.363 361 224 11 2 339 7 359 4.06e-39 148
Msa0323300 AT5G37020.1 29.363 361 224 11 2 339 7 359 5.64e-39 148
Msa0323300 AT1G34410.1 30.685 365 220 12 14 357 22 374 7.07e-39 147
Msa0323300 AT1G19850.1 30.685 365 211 11 1 336 37 388 8.48e-39 148
Msa0323300 AT1G19850.2 30.685 365 211 11 1 336 26 377 9.49e-39 147
Msa0323300 AT5G20730.2 31.429 350 203 12 15 338 20 358 1.47e-38 147
Msa0323300 AT3G61830.1 30.725 345 205 12 15 336 21 354 5.62e-38 144
Msa0323300 AT5G62000.4 30.423 378 222 15 16 364 58 423 1.15e-37 144
Msa0323300 AT5G62000.2 30.423 378 222 15 16 364 58 423 1.33e-37 144
Msa0323300 AT5G62000.5 30.423 378 222 15 16 364 58 423 1.33e-37 144
Msa0323300 AT5G62000.3 30.423 378 222 15 16 364 58 423 1.33e-37 144
Msa0323300 AT5G62000.1 30.423 378 222 15 16 364 58 423 1.33e-37 144
Msa0323300 AT1G30330.1 30.641 359 216 10 16 349 20 370 1.35e-37 144
Msa0323300 AT1G30330.3 30.641 359 216 10 16 349 22 372 1.42e-37 144
Msa0323300 AT1G30330.2 30.641 359 216 10 16 349 22 372 1.42e-37 144
Msa0323300 AT1G19220.1 30.659 349 205 12 16 338 20 357 3.46e-37 143
Msa0323300 AT5G60450.2 29.380 371 224 12 14 353 36 399 1.51e-35 138
Msa0323300 AT1G59750.4 28.689 366 218 12 19 355 22 373 2.06e-35 137
Msa0323300 AT1G59750.2 28.689 366 218 12 19 355 22 373 2.10e-35 137
Msa0323300 AT1G59750.1 28.689 366 218 12 19 355 22 373 2.49e-35 137
Msa0323300 AT1G59750.3 28.689 366 218 12 19 355 22 373 2.49e-35 137
Msa0323300 AT5G60450.1 29.268 369 223 12 16 353 62 423 4.17e-35 137
Msa0323300 AT1G34170.1 29.769 346 207 13 14 336 20 352 1.68e-34 133
Msa0323300 AT1G34170.2 29.762 336 194 13 14 336 20 326 1.61e-32 127
Msa0323300 AT1G34170.3 29.882 338 191 13 14 336 20 326 3.22e-32 127
Msa0323300 AT3G61830.2 30.314 287 174 9 69 336 24 303 2.11e-27 114
Msa0323300 AT1G43950.1 32.258 217 122 7 14 221 22 222 6.78e-27 107
Msa0323300 AT2G33860.2 32.479 234 132 8 125 336 2 231 1.04e-26 110
Msa0323300 AT5G37020.3 30.508 236 141 8 125 339 31 264 2.58e-24 105
Msa0323300 AT2G46530.2 30.112 269 162 9 121 370 33 294 1.15e-22 99.8
Msa0323300 ATMG00940.1 38.843 121 63 6 210 327 44 156 9.09e-13 66.2

Find 100 sgRNAs with CRISPR-Local

Find 298 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAATGCAACTTTGGTATT+TGG 0.133681 2_4:+26968913 None:intergenic
TCTCAATATCATAGGTTAAC+TGG 0.218607 2_4:-26967031 Msa0323300:intron
TTCATCTTAACTCTCATTCT+AGG 0.234993 2_4:+26968159 None:intergenic
TATCTCGTACGTCTAATTTA+TGG 0.240815 2_4:-26968089 Msa0323300:CDS
CACCATGGGCTGACTCTTCT+TGG 0.263929 2_4:+26966984 None:intergenic
CTCATCATCGTCGTTGCAAT+TGG 0.314881 2_4:+26968662 None:intergenic
GTAGAGATTGTCCCTTGATA+TGG 0.324016 2_4:+26968114 None:intergenic
AACGACGATGATGAGGTAAT+TGG 0.328138 2_4:-26968654 Msa0323300:CDS
GCTGCTGTTGGTGCTGGTGC+TGG 0.335243 2_4:+26968988 None:intergenic
GTATGCTTGCTTACATTAGT+AGG 0.336336 2_4:+26968609 None:intergenic
GCATCAACATCATTGGTTAT+TGG 0.339316 2_4:+26968711 None:intergenic
TTAACAAACGAACTCCATTC+AGG 0.339363 2_4:+26968435 None:intergenic
CGCATGTCCACCCTCAAATC+TGG 0.363208 2_4:-26968959 Msa0323300:CDS
CAACGGGAAAATTATTTGTT+GGG 0.375166 2_4:-26968365 Msa0323300:CDS
ATGGTTGCTGCTGTTGGTGC+TGG 0.385990 2_4:+26968982 None:intergenic
CAAATCTGGCAGACATTAAC+CGG 0.388348 2_4:-26968945 Msa0323300:CDS
TAAACTCTTGAATGCAACTT+TGG 0.402834 2_4:+26968906 None:intergenic
TCAACGGGAAAATTATTTGT+TGG 0.404341 2_4:-26968366 Msa0323300:CDS
CTGACGTTCATGGTGAAGTC+TGG 0.406535 2_4:-26968509 Msa0323300:CDS
CTCCTCGTCACTGACGTTCA+TGG 0.407231 2_4:-26968519 Msa0323300:CDS
AATGGAGTTCGTTTGTTAAG+AGG 0.407313 2_4:-26968431 Msa0323300:CDS
AGGAATCCCCTTATATGATA+AGG 0.414977 2_4:-26966863 Msa0323300:CDS
TAATTTATGGCGCATGCTAC+AGG 0.422222 2_4:-26968076 Msa0323300:intron
ATTTCCCTCAAACGTGCATC+AGG 0.435910 2_4:-26966951 Msa0323300:CDS
TGAGTTGGAGAAGGCAGTAA+TGG 0.441158 2_4:-26968307 Msa0323300:CDS
ACTATCCTCGAGGTGATGAT+TGG 0.444363 2_4:-26968239 Msa0323300:CDS
GACACAGGCATCAACATCAT+TGG 0.444932 2_4:+26968704 None:intergenic
GTTAATGTCTGCCAGATTTG+AGG 0.445255 2_4:+26968948 None:intergenic
TCATCTTAACTCTCATTCTA+GGG 0.445548 2_4:+26968160 None:intergenic
GATATAAAACACGTTTCTCT+TGG 0.446560 2_4:+26968458 None:intergenic
TGCCCCATTAAGTGATGAAA+AGG 0.448788 2_4:-26966883 Msa0323300:CDS
AGGTAATTGGTTCGTTTACA+AGG 0.453827 2_4:-26968641 Msa0323300:CDS
TGAAGACTGATAAATCTTCA+AGG 0.454632 2_4:-26968140 Msa0323300:CDS
TGGGAACCTCATGAGGGTCT+TGG 0.457592 2_4:+26968682 None:intergenic
AATTATTTGTTGGGATTCGC+AGG 0.462606 2_4:-26968356 Msa0323300:CDS
GTCGACCTGATGCACGTTTG+AGG 0.464249 2_4:+26966946 None:intergenic
GGATAGTAAACAATTTCAAA+TGG 0.472676 2_4:+26968255 None:intergenic
AGTAATGGAGGCAGTGAAGT+TGG 0.472794 2_4:-26968292 Msa0323300:CDS
TTAATGTCTGCCAGATTTGA+GGG 0.479203 2_4:+26968949 None:intergenic
ATGAATCAATGAAAATTCAA+TGG 0.482116 2_4:-26968185 Msa0323300:CDS
GGAGTGAATGTAAGCATTGG+AGG 0.486006 2_4:+26968842 None:intergenic
TCTCTTGGCAAACCCGTGGC+AGG 0.490609 2_4:+26968473 None:intergenic
TCATCATCGTCGTTGCAATT+GGG 0.492508 2_4:+26968663 None:intergenic
GAAAATATCTTCCCTCCGCT+TGG 0.492876 2_4:-26968561 Msa0323300:CDS
TAGAGATTGTCCCTTGATAT+GGG 0.494859 2_4:+26968115 None:intergenic
CTCAATATCATAGGTTAACT+GGG 0.496428 2_4:-26967030 Msa0323300:intron
CTCATGAGGGTCTTGGACAC+AGG 0.498403 2_4:+26968689 None:intergenic
TATGCTTGCTTACATTAGTA+GGG 0.498565 2_4:+26968610 None:intergenic
TGGTATTTGGACAGCAGTGC+CGG 0.499421 2_4:+26968926 None:intergenic
TGGCAAACCCGTGGCAGGCA+TGG 0.500790 2_4:+26968478 None:intergenic
AAGTTTCACCATGCCTGCCA+CGG 0.506565 2_4:-26968486 Msa0323300:CDS
TCGACCTGATGCACGTTTGA+GGG 0.510461 2_4:+26966947 None:intergenic
TAACAAACGAACTCCATTCA+GGG 0.512751 2_4:+26968436 None:intergenic
TCTTCAAGGATCCCATATCA+AGG 0.512818 2_4:-26968126 Msa0323300:CDS
ATGTAAGCATTGGAGGAGGA+AGG 0.516472 2_4:+26968849 None:intergenic
AGTTTCACCATGCCTGCCAC+GGG 0.517459 2_4:-26968485 Msa0323300:CDS
CATGCGATGGTTGCTGCTGT+TGG 0.533873 2_4:+26968976 None:intergenic
TTGCAATTGGGAACCTCATG+AGG 0.534875 2_4:+26968675 None:intergenic
GGAGGCAGTGAAGTTGGCAG+AGG 0.547497 2_4:-26968286 Msa0323300:CDS
TATCTTCCCTCCGCTTGGCA+TGG 0.558368 2_4:-26968556 Msa0323300:CDS
CGCCGATCCTCACACTGATG+AGG 0.560935 2_4:-26968757 Msa0323300:CDS
AAGGGAGTGAATGTAAGCAT+TGG 0.561164 2_4:+26968839 None:intergenic
CTGGTGCTGGTTGAGAGACA+TGG 0.567756 2_4:+26969001 None:intergenic
GCATATTCTAAGTGGCCTTG+TGG 0.574209 2_4:+26968876 None:intergenic
GTGAATGTAAGCATTGGAGG+AGG 0.588009 2_4:+26968845 None:intergenic
GTTGGAGAAGGCAGTAATGG+AGG 0.592416 2_4:-26968304 Msa0323300:CDS
TGGGATTCGCAGGAAAGCCG+CGG 0.593939 2_4:-26968346 Msa0323300:CDS
GGAGCAAAAGAAAGATGAGT+TGG 0.594103 2_4:-26968322 Msa0323300:CDS
GACCTCATCAGTGTGAGGAT+CGG 0.595759 2_4:+26968755 None:intergenic
GAAATAAGTTCAACCCACCA+TGG 0.601634 2_4:+26966969 None:intergenic
AAAGAAAGATGAGTTGGAGA+AGG 0.605720 2_4:-26968316 Msa0323300:CDS
AAATCTCCATGCCAAGCGGA+GGG 0.609417 2_4:+26968550 None:intergenic
CTTCAAGGATCCCATATCAA+GGG 0.609531 2_4:-26968125 Msa0323300:CDS
GAGATGATACAGATAGTGAA+AGG 0.609814 2_4:+26968795 None:intergenic
AAATAAGTTCAACCCACCAT+GGG 0.611317 2_4:+26966970 None:intergenic
GAAATCTCCATGCCAAGCGG+AGG 0.617181 2_4:+26968549 None:intergenic
AAGAAGAGTCAGCCCATGGT+GGG 0.617483 2_4:-26966982 Msa0323300:CDS
CACCATGAACGTCAGTGACG+AGG 0.617900 2_4:+26968517 None:intergenic
CGTTTCTCTTGGCAAACCCG+TGG 0.618791 2_4:+26968469 None:intergenic
AAAACGTTGAAGATCATGAA+GGG 0.620045 2_4:+26968821 None:intergenic
CACTATCTGTATCATCTCCG+CGG 0.622122 2_4:-26968790 Msa0323300:CDS
AAGGAGAAGCATATTCTAAG+TGG 0.626940 2_4:+26968868 None:intergenic
GAAAACGTTGAAGATCATGA+AGG 0.628457 2_4:+26968820 None:intergenic
CAATTGCAACGACGATGATG+AGG 0.630770 2_4:-26968661 Msa0323300:CDS
GAAATTGTTTACTATCCTCG+AGG 0.641156 2_4:-26968249 Msa0323300:CDS
TGCAATTGGGAACCTCATGA+GGG 0.643730 2_4:+26968676 None:intergenic
ATTTGAGGGTGGACATGCGA+TGG 0.643879 2_4:+26968963 None:intergenic
TTCCAAGAAGAGTCAGCCCA+TGG 0.644012 2_4:-26966986 Msa0323300:CDS
ATGCTTGCTTACATTAGTAG+GGG 0.652528 2_4:+26968611 None:intergenic
CAAGAAGAGTCAGCCCATGG+TGG 0.652994 2_4:-26966983 Msa0323300:CDS
CATGAACGTCAGTGACGAGG+AGG 0.677277 2_4:+26968520 None:intergenic
GCGAAGACCTCATCAGTGTG+AGG 0.682334 2_4:+26968750 None:intergenic
ATGTCTGCCAGATTTGAGGG+TGG 0.682807 2_4:+26968952 None:intergenic
ATCGGCGAGGAGATCAACCG+CGG 0.684227 2_4:+26968773 None:intergenic
TGAGAAATCTCCATGCCAAG+CGG 0.686661 2_4:+26968546 None:intergenic
CTGTGTCCAAGACCCTCATG+AGG 0.688345 2_4:-26968688 Msa0323300:CDS
GATTCGCAGGAAAGCCGCGG+CGG 0.692782 2_4:-26968343 Msa0323300:CDS
TCATGCCAATCATCACCTCG+AGG 0.713899 2_4:+26968234 None:intergenic
AAGAGGAAGAAACTCGACGT+CGG 0.718798 2_4:-26968414 Msa0323300:CDS
CATCAGTGTGAGGATCGGCG+AGG 0.752555 2_4:+26968760 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTCTTTTTTTTTTTTTTTT+TGG - chr2_4:26967808-26967827 Msa0323300:intron 10.0%
!!! AAATGATTTTTTTTTTTGAA+AGG + chr2_4:26968383-26968402 None:intergenic 10.0%
!!! CTTCTTTTTTTTTTTTTTTT+TGG - chr2_4:26967808-26967827 Msa0323300:intron 10.0%
!!! AAATGATTTTTTTTTTTGAA+AGG + chr2_4:26968383-26968402 None:intergenic 10.0%
!!! AATAATTTTAGAATTACAGT+GGG + chr2_4:26968029-26968048 None:intergenic 15.0%
!!! TAATAATTTTAGAATTACAG+TGG + chr2_4:26968030-26968049 None:intergenic 15.0%
!! ATTATAGTTAAAGTTTATAG+TGG - chr2_4:26968203-26968222 Msa0323300:CDS 15.0%
!! ATGATATTGAGATAAAAAAA+GGG + chr2_4:26968814-26968833 None:intergenic 15.0%
!! TATGATATTGAGATAAAAAA+AGG + chr2_4:26968815-26968834 None:intergenic 15.0%
!!! TTTTTTTATCTCAATATCAT+AGG - chr2_4:26968814-26968833 Msa0323300:CDS 15.0%
!!! AATAATTTTAGAATTACAGT+GGG + chr2_4:26968029-26968048 None:intergenic 15.0%
!!! TAATAATTTTAGAATTACAG+TGG + chr2_4:26968030-26968049 None:intergenic 15.0%
!! ATTATAGTTAAAGTTTATAG+TGG - chr2_4:26968203-26968222 Msa0323300:CDS 15.0%
!! ATGATATTGAGATAAAAAAA+GGG + chr2_4:26968814-26968833 None:intergenic 15.0%
!! TATGATATTGAGATAAAAAA+AGG + chr2_4:26968815-26968834 None:intergenic 15.0%
!!! TTTTTTTATCTCAATATCAT+AGG - chr2_4:26968814-26968833 Msa0323300:CDS 15.0%
!! ATGAATCAATGAAAATTCAA+TGG - chr2_4:26967668-26967687 Msa0323300:intron 20.0%
!! CTAATATTTATGAAGCAATT+AGG + chr2_4:26967932-26967951 None:intergenic 20.0%
!!! TGTCGATTAATTTAGTATTT+TGG - chr2_4:26968072-26968091 Msa0323300:intron 20.0%
!!! GTCGATTAATTTAGTATTTT+GGG - chr2_4:26968073-26968092 Msa0323300:intron 20.0%
!! TAACTACATAGATTAAAACT+TGG + chr2_4:26968233-26968252 None:intergenic 20.0%
!!! AAATACTTTTAATGCAATGT+AGG - chr2_4:26968701-26968720 Msa0323300:CDS 20.0%
!!! TTCTTATCGATTAAAAGTAT+TGG + chr2_4:26968742-26968761 None:intergenic 20.0%
!! ACAAAAACCTTATCATATAA+GGG + chr2_4:26969000-26969019 None:intergenic 20.0%
!! TACAAAAACCTTATCATATA+AGG + chr2_4:26969001-26969020 None:intergenic 20.0%
!! ATGAATCAATGAAAATTCAA+TGG - chr2_4:26967668-26967687 Msa0323300:intron 20.0%
!! CTAATATTTATGAAGCAATT+AGG + chr2_4:26967932-26967951 None:intergenic 20.0%
!!! TGTCGATTAATTTAGTATTT+TGG - chr2_4:26968072-26968091 Msa0323300:intron 20.0%
!!! GTCGATTAATTTAGTATTTT+GGG - chr2_4:26968073-26968092 Msa0323300:intron 20.0%
!! TAACTACATAGATTAAAACT+TGG + chr2_4:26968233-26968252 None:intergenic 20.0%
!!! AAATACTTTTAATGCAATGT+AGG - chr2_4:26968701-26968720 Msa0323300:CDS 20.0%
!!! TTCTTATCGATTAAAAGTAT+TGG + chr2_4:26968742-26968761 None:intergenic 20.0%
!! ACAAAAACCTTATCATATAA+GGG + chr2_4:26969000-26969019 None:intergenic 20.0%
!! TACAAAAACCTTATCATATA+AGG + chr2_4:26969001-26969020 None:intergenic 20.0%
!! TGTTTTCATGAAAAACTCAA+CGG - chr2_4:26967471-26967490 Msa0323300:intron 25.0%
! GGATAGTAAACAATTTCAAA+TGG + chr2_4:26967601-26967620 None:intergenic 25.0%
!! TATGAAGTGTCATCTAATTA+TGG + chr2_4:26967876-26967895 None:intergenic 25.0%
! TCATTGTGAAGCAAAATAAA+CGG + chr2_4:26967904-26967923 None:intergenic 25.0%
!! GAACAAAGAGTAGTATTTTA+AGG - chr2_4:26968153-26968172 Msa0323300:CDS 25.0%
!!! TTCTAAGTTTTTTAGTTGAG+GGG + chr2_4:26968937-26968956 None:intergenic 25.0%
!!! GTTCTAAGTTTTTTAGTTGA+GGG + chr2_4:26968938-26968957 None:intergenic 25.0%
!!! AGTTCTAAGTTTTTTAGTTG+AGG + chr2_4:26968939-26968958 None:intergenic 25.0%
!! ATTCCTTTTCATCACTTAAT+GGG + chr2_4:26968976-26968995 None:intergenic 25.0%
! CAAAAACCTTATCATATAAG+GGG + chr2_4:26968999-26969018 None:intergenic 25.0%
!! TGTTTTCATGAAAAACTCAA+CGG - chr2_4:26967471-26967490 Msa0323300:intron 25.0%
! GGATAGTAAACAATTTCAAA+TGG + chr2_4:26967601-26967620 None:intergenic 25.0%
!! TATGAAGTGTCATCTAATTA+TGG + chr2_4:26967876-26967895 None:intergenic 25.0%
! TCATTGTGAAGCAAAATAAA+CGG + chr2_4:26967904-26967923 None:intergenic 25.0%
!! GAACAAAGAGTAGTATTTTA+AGG - chr2_4:26968153-26968172 Msa0323300:CDS 25.0%
!!! TTCTAAGTTTTTTAGTTGAG+GGG + chr2_4:26968937-26968956 None:intergenic 25.0%
!!! GTTCTAAGTTTTTTAGTTGA+GGG + chr2_4:26968938-26968957 None:intergenic 25.0%
!!! AGTTCTAAGTTTTTTAGTTG+AGG + chr2_4:26968939-26968958 None:intergenic 25.0%
!! ATTCCTTTTCATCACTTAAT+GGG + chr2_4:26968976-26968995 None:intergenic 25.0%
! CAAAAACCTTATCATATAAG+GGG + chr2_4:26968999-26969018 None:intergenic 25.0%
TTGAATGCAACTTTGGTATT+TGG + chr2_4:26966943-26966962 None:intergenic 30.0%
TAAACTCTTGAATGCAACTT+TGG + chr2_4:26966950-26966969 None:intergenic 30.0%
! AGAGTTTACTATTTTCCACA+AGG - chr2_4:26966962-26966981 Msa0323300:CDS 30.0%
AAAACGTTGAAGATCATGAA+GGG + chr2_4:26967035-26967054 None:intergenic 30.0%
TATGCTTGCTTACATTAGTA+GGG + chr2_4:26967246-26967265 None:intergenic 30.0%
! AGCATACATTTTACATACCT+CGG - chr2_4:26967260-26967279 Msa0323300:intron 30.0%
GATATAAAACACGTTTCTCT+TGG + chr2_4:26967398-26967417 None:intergenic 30.0%
! GTTTTCATGAAAAACTCAAC+GGG - chr2_4:26967472-26967491 Msa0323300:intron 30.0%
TCAACGGGAAAATTATTTGT+TGG - chr2_4:26967487-26967506 Msa0323300:intron 30.0%
CAACGGGAAAATTATTTGTT+GGG - chr2_4:26967488-26967507 Msa0323300:intron 30.0%
TCATCTTAACTCTCATTCTA+GGG + chr2_4:26967696-26967715 None:intergenic 30.0%
TTCATCTTAACTCTCATTCT+AGG + chr2_4:26967697-26967716 None:intergenic 30.0%
TGAAGACTGATAAATCTTCA+AGG - chr2_4:26967713-26967732 Msa0323300:intron 30.0%
TATCTCGTACGTCTAATTTA+TGG - chr2_4:26967764-26967783 Msa0323300:intron 30.0%
CATTGTGAAGCAAAATAAAC+GGG + chr2_4:26967903-26967922 None:intergenic 30.0%
TATTAGAGCAAGTATGTTAC+TGG - chr2_4:26968045-26968064 Msa0323300:intron 30.0%
ATGCACTATTGTTCAAATGA+GGG + chr2_4:26968490-26968509 None:intergenic 30.0%
AATGCACTATTGTTCAAATG+AGG + chr2_4:26968491-26968510 None:intergenic 30.0%
TGTAATATCTCATGTATGTG+TGG - chr2_4:26968558-26968577 Msa0323300:CDS 30.0%
GTAATATCTCATGTATGTGT+GGG - chr2_4:26968559-26968578 Msa0323300:CDS 30.0%
TCTCAATATCATAGGTTAAC+TGG - chr2_4:26968822-26968841 Msa0323300:CDS 30.0%
CTCAATATCATAGGTTAACT+GGG - chr2_4:26968823-26968842 Msa0323300:CDS 30.0%
! TTCCTTTTCATCACTTAATG+GGG + chr2_4:26968975-26968994 None:intergenic 30.0%
! GATTCCTTTTCATCACTTAA+TGG + chr2_4:26968977-26968996 None:intergenic 30.0%
TTGAATGCAACTTTGGTATT+TGG + chr2_4:26966943-26966962 None:intergenic 30.0%
TAAACTCTTGAATGCAACTT+TGG + chr2_4:26966950-26966969 None:intergenic 30.0%
! AGAGTTTACTATTTTCCACA+AGG - chr2_4:26966962-26966981 Msa0323300:CDS 30.0%
AAAACGTTGAAGATCATGAA+GGG + chr2_4:26967035-26967054 None:intergenic 30.0%
TATGCTTGCTTACATTAGTA+GGG + chr2_4:26967246-26967265 None:intergenic 30.0%
! AGCATACATTTTACATACCT+CGG - chr2_4:26967260-26967279 Msa0323300:intron 30.0%
GATATAAAACACGTTTCTCT+TGG + chr2_4:26967398-26967417 None:intergenic 30.0%
! GTTTTCATGAAAAACTCAAC+GGG - chr2_4:26967472-26967491 Msa0323300:intron 30.0%
TCAACGGGAAAATTATTTGT+TGG - chr2_4:26967487-26967506 Msa0323300:intron 30.0%
CAACGGGAAAATTATTTGTT+GGG - chr2_4:26967488-26967507 Msa0323300:intron 30.0%
TCATCTTAACTCTCATTCTA+GGG + chr2_4:26967696-26967715 None:intergenic 30.0%
TTCATCTTAACTCTCATTCT+AGG + chr2_4:26967697-26967716 None:intergenic 30.0%
TGAAGACTGATAAATCTTCA+AGG - chr2_4:26967713-26967732 Msa0323300:intron 30.0%
TATCTCGTACGTCTAATTTA+TGG - chr2_4:26967764-26967783 Msa0323300:intron 30.0%
CATTGTGAAGCAAAATAAAC+GGG + chr2_4:26967903-26967922 None:intergenic 30.0%
TATTAGAGCAAGTATGTTAC+TGG - chr2_4:26968045-26968064 Msa0323300:intron 30.0%
ATGCACTATTGTTCAAATGA+GGG + chr2_4:26968490-26968509 None:intergenic 30.0%
AATGCACTATTGTTCAAATG+AGG + chr2_4:26968491-26968510 None:intergenic 30.0%
TGTAATATCTCATGTATGTG+TGG - chr2_4:26968558-26968577 Msa0323300:CDS 30.0%
GTAATATCTCATGTATGTGT+GGG - chr2_4:26968559-26968578 Msa0323300:CDS 30.0%
TCTCAATATCATAGGTTAAC+TGG - chr2_4:26968822-26968841 Msa0323300:CDS 30.0%
CTCAATATCATAGGTTAACT+GGG - chr2_4:26968823-26968842 Msa0323300:CDS 30.0%
! TTCCTTTTCATCACTTAATG+GGG + chr2_4:26968975-26968994 None:intergenic 30.0%
! GATTCCTTTTCATCACTTAA+TGG + chr2_4:26968977-26968996 None:intergenic 30.0%
TTAATGTCTGCCAGATTTGA+GGG + chr2_4:26966907-26966926 None:intergenic 35.0%
! AAGGAGAAGCATATTCTAAG+TGG + chr2_4:26966988-26967007 None:intergenic 35.0%
GAAAACGTTGAAGATCATGA+AGG + chr2_4:26967036-26967055 None:intergenic 35.0%
GAGATGATACAGATAGTGAA+AGG + chr2_4:26967061-26967080 None:intergenic 35.0%
! GCATCAACATCATTGGTTAT+TGG + chr2_4:26967145-26967164 None:intergenic 35.0%
!! AGGTAATTGGTTCGTTTACA+AGG - chr2_4:26967212-26967231 Msa0323300:intron 35.0%
ATGCTTGCTTACATTAGTAG+GGG + chr2_4:26967245-26967264 None:intergenic 35.0%
GTATGCTTGCTTACATTAGT+AGG + chr2_4:26967247-26967266 None:intergenic 35.0%
! ATATTTTCAGCACAAAACCG+AGG + chr2_4:26967280-26967299 None:intergenic 35.0%
! ACGTGTTTTATATCCCTGAA+TGG - chr2_4:26967404-26967423 Msa0323300:intron 35.0%
TAACAAACGAACTCCATTCA+GGG + chr2_4:26967420-26967439 None:intergenic 35.0%
TTAACAAACGAACTCCATTC+AGG + chr2_4:26967421-26967440 None:intergenic 35.0%
! AATGGAGTTCGTTTGTTAAG+AGG - chr2_4:26967422-26967441 Msa0323300:intron 35.0%
! AATTATTTGTTGGGATTCGC+AGG - chr2_4:26967497-26967516 Msa0323300:intron 35.0%
! AAAGAAAGATGAGTTGGAGA+AGG - chr2_4:26967537-26967556 Msa0323300:intron 35.0%
GAAATTGTTTACTATCCTCG+AGG - chr2_4:26967604-26967623 Msa0323300:intron 35.0%
! TGATTGGCATGATTTTGTAG+TGG - chr2_4:26967630-26967649 Msa0323300:intron 35.0%
TAGAGATTGTCCCTTGATAT+GGG + chr2_4:26967741-26967760 None:intergenic 35.0%
TATATTACTTTGTCCCCTAC+AGG - chr2_4:26967997-26968016 Msa0323300:intron 35.0%
CAATAGTGCATTGCAGTTAT+TGG - chr2_4:26968499-26968518 Msa0323300:CDS 35.0%
!!! TGCATTGCAGTTATTGGTTT+TGG - chr2_4:26968505-26968524 Msa0323300:CDS 35.0%
AAATAAGTTCAACCCACCAT+GGG + chr2_4:26968886-26968905 None:intergenic 35.0%
!!! AGTTTTTTAGTTGAGGGGAA+TGG + chr2_4:26968932-26968951 None:intergenic 35.0%
AGGAATCCCCTTATATGATA+AGG - chr2_4:26968990-26969009 Msa0323300:CDS 35.0%
TTAATGTCTGCCAGATTTGA+GGG + chr2_4:26966907-26966926 None:intergenic 35.0%
! AAGGAGAAGCATATTCTAAG+TGG + chr2_4:26966988-26967007 None:intergenic 35.0%
GAAAACGTTGAAGATCATGA+AGG + chr2_4:26967036-26967055 None:intergenic 35.0%
GAGATGATACAGATAGTGAA+AGG + chr2_4:26967061-26967080 None:intergenic 35.0%
! GCATCAACATCATTGGTTAT+TGG + chr2_4:26967145-26967164 None:intergenic 35.0%
!! AGGTAATTGGTTCGTTTACA+AGG - chr2_4:26967212-26967231 Msa0323300:intron 35.0%
ATGCTTGCTTACATTAGTAG+GGG + chr2_4:26967245-26967264 None:intergenic 35.0%
GTATGCTTGCTTACATTAGT+AGG + chr2_4:26967247-26967266 None:intergenic 35.0%
! ATATTTTCAGCACAAAACCG+AGG + chr2_4:26967280-26967299 None:intergenic 35.0%
! ACGTGTTTTATATCCCTGAA+TGG - chr2_4:26967404-26967423 Msa0323300:intron 35.0%
TAACAAACGAACTCCATTCA+GGG + chr2_4:26967420-26967439 None:intergenic 35.0%
TTAACAAACGAACTCCATTC+AGG + chr2_4:26967421-26967440 None:intergenic 35.0%
! AATGGAGTTCGTTTGTTAAG+AGG - chr2_4:26967422-26967441 Msa0323300:intron 35.0%
! AATTATTTGTTGGGATTCGC+AGG - chr2_4:26967497-26967516 Msa0323300:intron 35.0%
! AAAGAAAGATGAGTTGGAGA+AGG - chr2_4:26967537-26967556 Msa0323300:intron 35.0%
GAAATTGTTTACTATCCTCG+AGG - chr2_4:26967604-26967623 Msa0323300:intron 35.0%
! TGATTGGCATGATTTTGTAG+TGG - chr2_4:26967630-26967649 Msa0323300:intron 35.0%
TAGAGATTGTCCCTTGATAT+GGG + chr2_4:26967741-26967760 None:intergenic 35.0%
TATATTACTTTGTCCCCTAC+AGG - chr2_4:26967997-26968016 Msa0323300:intron 35.0%
CAATAGTGCATTGCAGTTAT+TGG - chr2_4:26968499-26968518 Msa0323300:CDS 35.0%
!!! TGCATTGCAGTTATTGGTTT+TGG - chr2_4:26968505-26968524 Msa0323300:CDS 35.0%
AAATAAGTTCAACCCACCAT+GGG + chr2_4:26968886-26968905 None:intergenic 35.0%
!!! AGTTTTTTAGTTGAGGGGAA+TGG + chr2_4:26968932-26968951 None:intergenic 35.0%
AGGAATCCCCTTATATGATA+AGG - chr2_4:26968990-26969009 Msa0323300:CDS 35.0%
GTTAATGTCTGCCAGATTTG+AGG + chr2_4:26966908-26966927 None:intergenic 40.0%
CAAATCTGGCAGACATTAAC+CGG - chr2_4:26966908-26966927 Msa0323300:CDS 40.0%
AAGGGAGTGAATGTAAGCAT+TGG + chr2_4:26967017-26967036 None:intergenic 40.0%
TCATCATCGTCGTTGCAATT+GGG + chr2_4:26967193-26967212 None:intergenic 40.0%
AACGACGATGATGAGGTAAT+TGG - chr2_4:26967199-26967218 Msa0323300:intron 40.0%
GGAGCAAAAGAAAGATGAGT+TGG - chr2_4:26967531-26967550 Msa0323300:intron 40.0%
TCTTCAAGGATCCCATATCA+AGG - chr2_4:26967727-26967746 Msa0323300:intron 40.0%
CTTCAAGGATCCCATATCAA+GGG - chr2_4:26967728-26967747 Msa0323300:intron 40.0%
GTAGAGATTGTCCCTTGATA+TGG + chr2_4:26967742-26967761 None:intergenic 40.0%
TAATTTATGGCGCATGCTAC+AGG - chr2_4:26967777-26967796 Msa0323300:intron 40.0%
ATATCTCATGTATGTGTGGG+TGG - chr2_4:26968562-26968581 Msa0323300:CDS 40.0%
GAAATAAGTTCAACCCACCA+TGG + chr2_4:26968887-26968906 None:intergenic 40.0%
TGCCCCATTAAGTGATGAAA+AGG - chr2_4:26968970-26968989 Msa0323300:CDS 40.0%
GTTAATGTCTGCCAGATTTG+AGG + chr2_4:26966908-26966927 None:intergenic 40.0%
CAAATCTGGCAGACATTAAC+CGG - chr2_4:26966908-26966927 Msa0323300:CDS 40.0%
AAGGGAGTGAATGTAAGCAT+TGG + chr2_4:26967017-26967036 None:intergenic 40.0%
TCATCATCGTCGTTGCAATT+GGG + chr2_4:26967193-26967212 None:intergenic 40.0%
AACGACGATGATGAGGTAAT+TGG - chr2_4:26967199-26967218 Msa0323300:intron 40.0%
GGAGCAAAAGAAAGATGAGT+TGG - chr2_4:26967531-26967550 Msa0323300:intron 40.0%
TCTTCAAGGATCCCATATCA+AGG - chr2_4:26967727-26967746 Msa0323300:intron 40.0%
CTTCAAGGATCCCATATCAA+GGG - chr2_4:26967728-26967747 Msa0323300:intron 40.0%
GTAGAGATTGTCCCTTGATA+TGG + chr2_4:26967742-26967761 None:intergenic 40.0%
TAATTTATGGCGCATGCTAC+AGG - chr2_4:26967777-26967796 Msa0323300:intron 40.0%
ATATCTCATGTATGTGTGGG+TGG - chr2_4:26968562-26968581 Msa0323300:CDS 40.0%
GAAATAAGTTCAACCCACCA+TGG + chr2_4:26968887-26968906 None:intergenic 40.0%
TGCCCCATTAAGTGATGAAA+AGG - chr2_4:26968970-26968989 Msa0323300:CDS 40.0%
! GCATATTCTAAGTGGCCTTG+TGG + chr2_4:26966980-26966999 None:intergenic 45.0%
!! ATGTAAGCATTGGAGGAGGA+AGG + chr2_4:26967007-26967026 None:intergenic 45.0%
!! GTGAATGTAAGCATTGGAGG+AGG + chr2_4:26967011-26967030 None:intergenic 45.0%
!! GGAGTGAATGTAAGCATTGG+AGG + chr2_4:26967014-26967033 None:intergenic 45.0%
CACTATCTGTATCATCTCCG+CGG - chr2_4:26967063-26967082 Msa0323300:intron 45.0%
GACACAGGCATCAACATCAT+TGG + chr2_4:26967152-26967171 None:intergenic 45.0%
TGCAATTGGGAACCTCATGA+GGG + chr2_4:26967180-26967199 None:intergenic 45.0%
TTGCAATTGGGAACCTCATG+AGG + chr2_4:26967181-26967200 None:intergenic 45.0%
CTCATCATCGTCGTTGCAAT+TGG + chr2_4:26967194-26967213 None:intergenic 45.0%
CAATTGCAACGACGATGATG+AGG - chr2_4:26967192-26967211 Msa0323300:intron 45.0%
GAAAATATCTTCCCTCCGCT+TGG - chr2_4:26967292-26967311 Msa0323300:intron 45.0%
TGAGAAATCTCCATGCCAAG+CGG + chr2_4:26967310-26967329 None:intergenic 45.0%
AAGAGGAAGAAACTCGACGT+CGG - chr2_4:26967439-26967458 Msa0323300:intron 45.0%
! TGAGTTGGAGAAGGCAGTAA+TGG - chr2_4:26967546-26967565 Msa0323300:intron 45.0%
! AGTAATGGAGGCAGTGAAGT+TGG - chr2_4:26967561-26967580 Msa0323300:intron 45.0%
ACTATCCTCGAGGTGATGAT+TGG - chr2_4:26967614-26967633 Msa0323300:intron 45.0%
ACAGTGGGACTTATCCTGTA+GGG + chr2_4:26968014-26968033 None:intergenic 45.0%
TACAGTGGGACTTATCCTGT+AGG + chr2_4:26968015-26968034 None:intergenic 45.0%
ATTTCCCTCAAACGTGCATC+AGG - chr2_4:26968902-26968921 Msa0323300:CDS 45.0%
! GCATATTCTAAGTGGCCTTG+TGG + chr2_4:26966980-26966999 None:intergenic 45.0%
!! ATGTAAGCATTGGAGGAGGA+AGG + chr2_4:26967007-26967026 None:intergenic 45.0%
!! GTGAATGTAAGCATTGGAGG+AGG + chr2_4:26967011-26967030 None:intergenic 45.0%
!! GGAGTGAATGTAAGCATTGG+AGG + chr2_4:26967014-26967033 None:intergenic 45.0%
CACTATCTGTATCATCTCCG+CGG - chr2_4:26967063-26967082 Msa0323300:intron 45.0%
GACACAGGCATCAACATCAT+TGG + chr2_4:26967152-26967171 None:intergenic 45.0%
TGCAATTGGGAACCTCATGA+GGG + chr2_4:26967180-26967199 None:intergenic 45.0%
TTGCAATTGGGAACCTCATG+AGG + chr2_4:26967181-26967200 None:intergenic 45.0%
CTCATCATCGTCGTTGCAAT+TGG + chr2_4:26967194-26967213 None:intergenic 45.0%
CAATTGCAACGACGATGATG+AGG - chr2_4:26967192-26967211 Msa0323300:intron 45.0%
GAAAATATCTTCCCTCCGCT+TGG - chr2_4:26967292-26967311 Msa0323300:intron 45.0%
TGAGAAATCTCCATGCCAAG+CGG + chr2_4:26967310-26967329 None:intergenic 45.0%
AAGAGGAAGAAACTCGACGT+CGG - chr2_4:26967439-26967458 Msa0323300:intron 45.0%
! TGAGTTGGAGAAGGCAGTAA+TGG - chr2_4:26967546-26967565 Msa0323300:intron 45.0%
! AGTAATGGAGGCAGTGAAGT+TGG - chr2_4:26967561-26967580 Msa0323300:intron 45.0%
ACTATCCTCGAGGTGATGAT+TGG - chr2_4:26967614-26967633 Msa0323300:intron 45.0%
ACAGTGGGACTTATCCTGTA+GGG + chr2_4:26968014-26968033 None:intergenic 45.0%
TACAGTGGGACTTATCCTGT+AGG + chr2_4:26968015-26968034 None:intergenic 45.0%
ATTTCCCTCAAACGTGCATC+AGG - chr2_4:26968902-26968921 Msa0323300:CDS 45.0%
ATTTGAGGGTGGACATGCGA+TGG + chr2_4:26966893-26966912 None:intergenic 50.0%
ATGTCTGCCAGATTTGAGGG+TGG + chr2_4:26966904-26966923 None:intergenic 50.0%
TGGTATTTGGACAGCAGTGC+CGG + chr2_4:26966930-26966949 None:intergenic 50.0%
GACCTCATCAGTGTGAGGAT+CGG + chr2_4:26967101-26967120 None:intergenic 50.0%
AAATCTCCATGCCAAGCGGA+GGG + chr2_4:26967306-26967325 None:intergenic 50.0%
CTGACGTTCATGGTGAAGTC+TGG - chr2_4:26967344-26967363 Msa0323300:intron 50.0%
AAGTTTCACCATGCCTGCCA+CGG - chr2_4:26967367-26967386 Msa0323300:intron 50.0%
! ATCTTTCTTTTGCTCCGCCG+CGG + chr2_4:26967527-26967546 None:intergenic 50.0%
GTTGGAGAAGGCAGTAATGG+AGG - chr2_4:26967549-26967568 Msa0323300:intron 50.0%
TCATGCCAATCATCACCTCG+AGG + chr2_4:26967622-26967641 None:intergenic 50.0%
CAGTGGGACTTATCCTGTAG+GGG + chr2_4:26968013-26968032 None:intergenic 50.0%
CTCATGTATGTGTGGGTGGA+TGG - chr2_4:26968566-26968585 Msa0323300:CDS 50.0%
TGTATGTGTGGGTGGATGGA+TGG - chr2_4:26968570-26968589 Msa0323300:CDS 50.0%
TTCCAAGAAGAGTCAGCCCA+TGG - chr2_4:26968867-26968886 Msa0323300:CDS 50.0%
AAGAAGAGTCAGCCCATGGT+GGG - chr2_4:26968871-26968890 Msa0323300:CDS 50.0%
TCGACCTGATGCACGTTTGA+GGG + chr2_4:26968909-26968928 None:intergenic 50.0%
ATTTGAGGGTGGACATGCGA+TGG + chr2_4:26966893-26966912 None:intergenic 50.0%
ATGTCTGCCAGATTTGAGGG+TGG + chr2_4:26966904-26966923 None:intergenic 50.0%
TGGTATTTGGACAGCAGTGC+CGG + chr2_4:26966930-26966949 None:intergenic 50.0%
GACCTCATCAGTGTGAGGAT+CGG + chr2_4:26967101-26967120 None:intergenic 50.0%
AAATCTCCATGCCAAGCGGA+GGG + chr2_4:26967306-26967325 None:intergenic 50.0%
CTGACGTTCATGGTGAAGTC+TGG - chr2_4:26967344-26967363 Msa0323300:intron 50.0%
AAGTTTCACCATGCCTGCCA+CGG - chr2_4:26967367-26967386 Msa0323300:intron 50.0%
! ATCTTTCTTTTGCTCCGCCG+CGG + chr2_4:26967527-26967546 None:intergenic 50.0%
GTTGGAGAAGGCAGTAATGG+AGG - chr2_4:26967549-26967568 Msa0323300:intron 50.0%
TCATGCCAATCATCACCTCG+AGG + chr2_4:26967622-26967641 None:intergenic 50.0%
CAGTGGGACTTATCCTGTAG+GGG + chr2_4:26968013-26968032 None:intergenic 50.0%
CTCATGTATGTGTGGGTGGA+TGG - chr2_4:26968566-26968585 Msa0323300:CDS 50.0%
TGTATGTGTGGGTGGATGGA+TGG - chr2_4:26968570-26968589 Msa0323300:CDS 50.0%
TTCCAAGAAGAGTCAGCCCA+TGG - chr2_4:26968867-26968886 Msa0323300:CDS 50.0%
AAGAAGAGTCAGCCCATGGT+GGG - chr2_4:26968871-26968890 Msa0323300:CDS 50.0%
TCGACCTGATGCACGTTTGA+GGG + chr2_4:26968909-26968928 None:intergenic 50.0%
ATGGTTGCTGCTGTTGGTGC+TGG + chr2_4:26966874-26966893 None:intergenic 55.0%
CATGCGATGGTTGCTGCTGT+TGG + chr2_4:26966880-26966899 None:intergenic 55.0%
CGCATGTCCACCCTCAAATC+TGG - chr2_4:26966894-26966913 Msa0323300:CDS 55.0%
GCGAAGACCTCATCAGTGTG+AGG + chr2_4:26967106-26967125 None:intergenic 55.0%
CTCATGAGGGTCTTGGACAC+AGG + chr2_4:26967167-26967186 None:intergenic 55.0%
CTGTGTCCAAGACCCTCATG+AGG - chr2_4:26967165-26967184 Msa0323300:intron 55.0%
TGGGAACCTCATGAGGGTCT+TGG + chr2_4:26967174-26967193 None:intergenic 55.0%
TATCTTCCCTCCGCTTGGCA+TGG - chr2_4:26967297-26967316 Msa0323300:intron 55.0%
GAAATCTCCATGCCAAGCGG+AGG + chr2_4:26967307-26967326 None:intergenic 55.0%
CATGAACGTCAGTGACGAGG+AGG + chr2_4:26967336-26967355 None:intergenic 55.0%
CTCCTCGTCACTGACGTTCA+TGG - chr2_4:26967334-26967353 Msa0323300:intron 55.0%
CACCATGAACGTCAGTGACG+AGG + chr2_4:26967339-26967358 None:intergenic 55.0%
AGTTTCACCATGCCTGCCAC+GGG - chr2_4:26967368-26967387 Msa0323300:intron 55.0%
CGTTTCTCTTGGCAAACCCG+TGG + chr2_4:26967387-26967406 None:intergenic 55.0%
! CACCATGGGCTGACTCTTCT+TGG + chr2_4:26968872-26968891 None:intergenic 55.0%
CAAGAAGAGTCAGCCCATGG+TGG - chr2_4:26968870-26968889 Msa0323300:CDS 55.0%
GTCGACCTGATGCACGTTTG+AGG + chr2_4:26968910-26968929 None:intergenic 55.0%
ATGGTTGCTGCTGTTGGTGC+TGG + chr2_4:26966874-26966893 None:intergenic 55.0%
CATGCGATGGTTGCTGCTGT+TGG + chr2_4:26966880-26966899 None:intergenic 55.0%
CGCATGTCCACCCTCAAATC+TGG - chr2_4:26966894-26966913 Msa0323300:CDS 55.0%
GCGAAGACCTCATCAGTGTG+AGG + chr2_4:26967106-26967125 None:intergenic 55.0%
CTCATGAGGGTCTTGGACAC+AGG + chr2_4:26967167-26967186 None:intergenic 55.0%
CTGTGTCCAAGACCCTCATG+AGG - chr2_4:26967165-26967184 Msa0323300:intron 55.0%
TGGGAACCTCATGAGGGTCT+TGG + chr2_4:26967174-26967193 None:intergenic 55.0%
TATCTTCCCTCCGCTTGGCA+TGG - chr2_4:26967297-26967316 Msa0323300:intron 55.0%
GAAATCTCCATGCCAAGCGG+AGG + chr2_4:26967307-26967326 None:intergenic 55.0%
CATGAACGTCAGTGACGAGG+AGG + chr2_4:26967336-26967355 None:intergenic 55.0%
CTCCTCGTCACTGACGTTCA+TGG - chr2_4:26967334-26967353 Msa0323300:intron 55.0%
CACCATGAACGTCAGTGACG+AGG + chr2_4:26967339-26967358 None:intergenic 55.0%
AGTTTCACCATGCCTGCCAC+GGG - chr2_4:26967368-26967387 Msa0323300:intron 55.0%
CGTTTCTCTTGGCAAACCCG+TGG + chr2_4:26967387-26967406 None:intergenic 55.0%
! CACCATGGGCTGACTCTTCT+TGG + chr2_4:26968872-26968891 None:intergenic 55.0%
CAAGAAGAGTCAGCCCATGG+TGG - chr2_4:26968870-26968889 Msa0323300:CDS 55.0%
GTCGACCTGATGCACGTTTG+AGG + chr2_4:26968910-26968929 None:intergenic 55.0%
ATCGGCGAGGAGATCAACCG+CGG + chr2_4:26967083-26967102 None:intergenic 60.0%
CATCAGTGTGAGGATCGGCG+AGG + chr2_4:26967096-26967115 None:intergenic 60.0%
CGCCGATCCTCACACTGATG+AGG - chr2_4:26967096-26967115 Msa0323300:intron 60.0%
TCTCTTGGCAAACCCGTGGC+AGG + chr2_4:26967383-26967402 None:intergenic 60.0%
TGGGATTCGCAGGAAAGCCG+CGG - chr2_4:26967507-26967526 Msa0323300:intron 60.0%
GGAGGCAGTGAAGTTGGCAG+AGG - chr2_4:26967567-26967586 Msa0323300:intron 60.0%
ATCGGCGAGGAGATCAACCG+CGG + chr2_4:26967083-26967102 None:intergenic 60.0%
CATCAGTGTGAGGATCGGCG+AGG + chr2_4:26967096-26967115 None:intergenic 60.0%
CGCCGATCCTCACACTGATG+AGG - chr2_4:26967096-26967115 Msa0323300:intron 60.0%
TCTCTTGGCAAACCCGTGGC+AGG + chr2_4:26967383-26967402 None:intergenic 60.0%
TGGGATTCGCAGGAAAGCCG+CGG - chr2_4:26967507-26967526 Msa0323300:intron 60.0%
GGAGGCAGTGAAGTTGGCAG+AGG - chr2_4:26967567-26967586 Msa0323300:intron 60.0%
!! GCTGCTGTTGGTGCTGGTGC+TGG + chr2_4:26966868-26966887 None:intergenic 65.0%
TGGCAAACCCGTGGCAGGCA+TGG + chr2_4:26967378-26967397 None:intergenic 65.0%
GATTCGCAGGAAAGCCGCGG+CGG - chr2_4:26967510-26967529 Msa0323300:intron 65.0%
!! GCTGCTGTTGGTGCTGGTGC+TGG + chr2_4:26966868-26966887 None:intergenic 65.0%
TGGCAAACCCGTGGCAGGCA+TGG + chr2_4:26967378-26967397 None:intergenic 65.0%
GATTCGCAGGAAAGCCGCGG+CGG - chr2_4:26967510-26967529 Msa0323300:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 26966854 26969021 26966854 ID=Msa0323300;Name=Msa0323300
chr2_4 mRNA 26966854 26969021 26966854 ID=Msa0323300-mRNA-1;Parent=Msa0323300;Name=Msa0323300-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|2|0|376
chr2_4 exon 26968077 26969021 26968077 ID=Msa0323300-mRNA-1:exon:9409;Parent=Msa0323300-mRNA-1
chr2_4 exon 26966854 26967039 26966854 ID=Msa0323300-mRNA-1:exon:9408;Parent=Msa0323300-mRNA-1
chr2_4 CDS 26968077 26969021 26968077 ID=Msa0323300-mRNA-1:cds;Parent=Msa0323300-mRNA-1
chr2_4 CDS 26966854 26967039 26966854 ID=Msa0323300-mRNA-1:cds;Parent=Msa0323300-mRNA-1
Gene Sequence

>Msa0323300

ATGTCTCTCAACCAGCACCAGCACCAACAGCAGCAACCATCGCATGTCCACCCTCAAATCTGGCAGACATTAACCGGCACTGCTGTCCAAATACCAAAGTTGCATTCAAGAGTTTACTATTTTCCACAAGGCCACTTAGAATATGCTTCTCCTTCCTCCTCCAATGCTTACATTCACTCCCTTCATGATCTTCAACGTTTTCGTCCTTTCACTATCTGTATCATCTCCGCGGTTGATCTCCTCGCCGATCCTCACACTGATGAGGTCTTCGCTAAACTGCTACTCACTCCAATAACCAATGATGTTGATGCCTGTGTCCAAGACCCTCATGAGGTTCCCAATTGCAACGACGATGATGAGGTAATTGGTTCGTTTACAAGGACTCTCGCCCCTACTAATGTAAGCAAGCATACATTTTACATACCTCGGTTTTGTGCTGAAAATATCTTCCCTCCGCTTGGCATGGAGATTTCTCAAAACCTCCTCGTCACTGACGTTCATGGTGAAGTCTGGAAGTTTCACCATGCCTGCCACGGGTTTGCCAAGAGAAACGTGTTTTATATCCCTGAATGGAGTTCGTTTGTTAAGAGGAAGAAACTCGACGTCGGAGATGCTGTTGTTTTCATGAAAAACTCAACGGGAAAATTATTTGTTGGGATTCGCAGGAAAGCCGCGGCGGAGCAAAAGAAAGATGAGTTGGAGAAGGCAGTAATGGAGGCAGTGAAGTTGGCAGAGGAGAACAAGCCATTTGAAATTGTTTACTATCCTCGAGGTGATGATTGGCATGATTTTGTAGTGGATGCTAATATTGTTGATGAATCAATGAAAATTCAATGGAACCCTAGAATGAGAGTTAAGATGAAGACTGATAAATCTTCAAGGATCCCATATCAAGGGACAATCTCTACTGTATCTCGTACGTCTAATTTATGGCGCATGCTACAGGTTAACTGGGATGAATTTCAAGTCTCACAAATTCCAAGAAGAGTCAGCCCATGGTGGGTTGAACTTATTTCCCTCAAACGTGCATCAGGTCGACCATTCCCCTCAACTAAAAAACTTAGAACTGTTCAAAGTTCTGCCCCATTAAGTGATGAAAAGGAATCCCCTTATATGATAAGGTTTTTGTAA
Protein sequence

>Msa0323300

MSLNQHQHQQQQPSHVHPQIWQTLTGTAVQIPKLHSRVYYFPQGHLEYASPSSSNAYIHSLHDLQRFRPFTICIISAVDLLADPHTDEVFAKLLLTPITNDVDACVQDPHEVPNCNDDDEVIGSFTRTLAPTNVSKHTFYIPRFCAENIFPPLGMEISQNLLVTDVHGEVWKFHHACHGFAKRNVFYIPEWSSFVKRKKLDVGDAVVFMKNSTGKLFVGIRRKAAAEQKKDELEKAVMEAVKLAEENKPFEIVYYPRGDDWHDFVVDANIVDESMKIQWNPRMRVKMKTDKSSRIPYQGTISTVSRTSNLWRMLQVNWDEFQVSQIPRRVSPWWVELISLKRASGRPFPSTKKLRTVQSSAPLSDEKESPYMIRFL*