Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324800 | XP_024632337.1 | 91.176 | 646 | 48 | 5 | 6 | 646 | 16 | 657 | 0.0 | 1126 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324800 | sp|Q3ECY6|SDG41_ARATH | 36.973 | 641 | 311 | 18 | 3 | 634 | 1 | 557 | 5.08e-108 | 340 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0324800 | TR | SET |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324800 | MtrunA17_Chr2g0302141 | 91.036 | 647 | 48 | 6 | 6 | 646 | 16 | 658 | 0.0 | 1121 |
| Msa0324800 | MtrunA17_Chr3g0108341 | 90.426 | 94 | 7 | 1 | 135 | 228 | 1 | 92 | 8.16e-52 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0324800 | AT1G43245.1 | 36.973 | 641 | 311 | 18 | 3 | 634 | 1 | 557 | 5.16e-109 | 340 |
| Msa0324800 | AT1G43245.2 | 38.230 | 565 | 283 | 16 | 3 | 559 | 1 | 507 | 5.43e-100 | 317 |
Find 145 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACTCCTCACAATCAATTT+TGG | 0.137975 | 2_4:-30676504 | None:intergenic |
| CTTAACATATGGAGGTTTAT+TGG | 0.183713 | 2_4:+30679210 | Msa0324800:CDS |
| CAACGACGGTGCAGCGATTC+TGG | 0.215687 | 2_4:+30675371 | Msa0324800:CDS |
| CCATTCCCATTTGGTTTATC+AGG | 0.221358 | 2_4:+30679252 | Msa0324800:CDS |
| GTCTCTGAAGAACTTGTAAT+TGG | 0.243344 | 2_4:-30678357 | None:intergenic |
| CGCGCTGGTGATTTATTATC+TGG | 0.254941 | 2_4:+30678596 | Msa0324800:CDS |
| TTTAGAGCCTGTATGTTAAA+TGG | 0.281071 | 2_4:+30678896 | Msa0324800:CDS |
| ATGCTGTAAGTGGTCATTAA+TGG | 0.283977 | 2_4:+30678868 | Msa0324800:CDS |
| AGTGGTGGTGGAGGAGGAGG+CGG | 0.300063 | 2_4:-30675212 | None:intergenic |
| CTTACTCCATCCTGAACTTC+TGG | 0.315654 | 2_4:-30678792 | None:intergenic |
| AGGAGGTGGAGGAGGAAGGG+AGG | 0.318214 | 2_4:-30675170 | None:intergenic |
| GGCGGAGGGCGGTGCGGAGG+AGG | 0.320041 | 2_4:-30675194 | None:intergenic |
| GGAGGCGGAGGGCGGTGCGG+AGG | 0.324671 | 2_4:-30675197 | None:intergenic |
| GGTGGTGGAGGAGGAGGCGG+AGG | 0.328360 | 2_4:-30675209 | None:intergenic |
| GGGAGTGGTGGTGGAGGAGG+AGG | 0.328541 | 2_4:-30675215 | None:intergenic |
| GAATGGAGCTATGCGAAGTT+TGG | 0.333038 | 2_4:-30675580 | None:intergenic |
| TAAGTTTCTTAATGTTGATT+TGG | 0.342753 | 2_4:+30678811 | Msa0324800:CDS |
| TTAACTCTTACCAGAAGTTC+AGG | 0.346116 | 2_4:+30678782 | Msa0324800:CDS |
| AGGAAGGAGGTGGAGGAGGA+AGG | 0.349493 | 2_4:-30675174 | None:intergenic |
| AAGTAGAGAAGAAGAAGAAT+TGG | 0.349685 | 2_4:-30675547 | None:intergenic |
| GAATGGGAGGTGGAGCAGTC+TGG | 0.349876 | 2_4:-30675117 | None:intergenic |
| TTATTGGCTTATATATGTTA+TGG | 0.352031 | 2_4:+30679226 | Msa0324800:CDS |
| TGCAAGGACCCTATCAATTT+CGG | 0.353888 | 2_4:+30679034 | Msa0324800:CDS |
| ATTACCCAGCCGAAATTGAT+AGG | 0.361279 | 2_4:-30679043 | None:intergenic |
| GGAAGGAGGTGGAGGAGGAA+GGG | 0.365772 | 2_4:-30675173 | None:intergenic |
| AGGTGGAGGAGGAAGGGAGG+TGG | 0.369213 | 2_4:-30675167 | None:intergenic |
| GTGGTGTTCGGCGGAGGAGA+GGG | 0.371358 | 2_4:-30675148 | None:intergenic |
| GCGGAGGAGGAAGGAGGTGG+AGG | 0.371750 | 2_4:-30675181 | None:intergenic |
| GGGGATTGAGGAATGGGAGG+TGG | 0.372774 | 2_4:-30675127 | None:intergenic |
| GAGGAGGAAGGAGGTGGAGG+AGG | 0.375093 | 2_4:-30675178 | None:intergenic |
| GGTGGTGTTCGGCGGAGGAG+AGG | 0.377699 | 2_4:-30675149 | None:intergenic |
| TGGTGTTCGGCGGAGGAGAG+GGG | 0.381555 | 2_4:-30675147 | None:intergenic |
| CGGGCTCATGATATCAAAAC+TGG | 0.384552 | 2_4:+30679091 | Msa0324800:CDS |
| CAGACATTACTCGTAATGTT+TGG | 0.393354 | 2_4:+30678975 | Msa0324800:CDS |
| TTATGGTCCCCATTCCCATT+TGG | 0.394634 | 2_4:+30679243 | Msa0324800:CDS |
| TTTGAACCTGATAAACCAAA+TGG | 0.405727 | 2_4:-30679258 | None:intergenic |
| GGAGGAAGGGAGGTGGTGTT+CGG | 0.406542 | 2_4:-30675160 | None:intergenic |
| GGATTATTGGGATTGGGAAT+GGG | 0.408528 | 2_4:-30675075 | None:intergenic |
| TTGGGATTGGGAATGGGAGG+TGG | 0.411307 | 2_4:-30675069 | None:intergenic |
| GTGGAGGAGGAGGCGGAGGG+CGG | 0.414326 | 2_4:-30675205 | None:intergenic |
| CTGATAAACCAAATGGGAAT+GGG | 0.419367 | 2_4:-30679251 | None:intergenic |
| TCTGGGGAGCAGTAGTGAAT+GGG | 0.423252 | 2_4:-30675099 | None:intergenic |
| GGTGCGGAGGAGGAAGGAGG+TGG | 0.423852 | 2_4:-30675184 | None:intergenic |
| GGGATTATTGGGATTGGGAA+TGG | 0.424603 | 2_4:-30675076 | None:intergenic |
| GGTGTTCGGCGGAGGAGAGG+GGG | 0.426375 | 2_4:-30675146 | None:intergenic |
| AATGGGAGGTGGAGCAGTCT+GGG | 0.430259 | 2_4:-30675116 | None:intergenic |
| TGGAACCATGGGAGTGGTGG+TGG | 0.430304 | 2_4:-30675224 | None:intergenic |
| CATGGGAGTGGTGGTGGAGG+AGG | 0.431136 | 2_4:-30675218 | None:intergenic |
| GTCTGGGGAGCAGTAGTGAA+TGG | 0.436318 | 2_4:-30675100 | None:intergenic |
| GAGAATCGGTAGCACGCATT+AGG | 0.437091 | 2_4:-30675519 | None:intergenic |
| CATGAATCTGTGAATAGAAC+TGG | 0.437992 | 2_4:+30679127 | Msa0324800:CDS |
| GGAGGAGGCGGAGGGCGGTG+CGG | 0.441836 | 2_4:-30675200 | None:intergenic |
| GGTGTACATTGCTTAACATA+TGG | 0.441977 | 2_4:+30679199 | Msa0324800:CDS |
| AAGAATTGGAGAAGGAGAAT+CGG | 0.451919 | 2_4:-30675533 | None:intergenic |
| GTTGTCTGTGGAGATTCGTC+TGG | 0.452765 | 2_4:+30678326 | Msa0324800:CDS |
| ATTTAGAGAGAGGTGGTGAA+GGG | 0.459642 | 2_4:-30678540 | None:intergenic |
| GGAGCAGTGAGTGTGGAGAT+AGG | 0.464636 | 2_4:-30675025 | None:intergenic |
| AGGGAGGTGGTGTTCGGCGG+AGG | 0.467856 | 2_4:-30675154 | None:intergenic |
| GATTTGACCATTTAACATAC+AGG | 0.472029 | 2_4:-30678903 | None:intergenic |
| TATAACATCTTCGATGGAAT+CGG | 0.473689 | 2_4:-30678399 | None:intergenic |
| AATTTAGAGAGAGGTGGTGA+AGG | 0.475466 | 2_4:-30678541 | None:intergenic |
| GAACGAGACAATCGGAACTA+TGG | 0.481166 | 2_4:+30678043 | Msa0324800:CDS |
| AGTATCAAGAAAATTAGAAA+GGG | 0.482563 | 2_4:+30676522 | Msa0324800:CDS |
| GAGAAAGAGAGTGGAGTGAG+TGG | 0.483450 | 2_4:-30674991 | None:intergenic |
| AGGACCCTATCAATTTCGGC+TGG | 0.493252 | 2_4:+30679038 | Msa0324800:CDS |
| GGCGGTGCGGAGGAGGAAGG+AGG | 0.495565 | 2_4:-30675187 | None:intergenic |
| GAGTATCAAGAAAATTAGAA+AGG | 0.498335 | 2_4:+30676521 | Msa0324800:CDS |
| CTCCTCCACCACCACTCCCA+TGG | 0.499092 | 2_4:+30675219 | Msa0324800:CDS |
| TTATTGGGATTGGGAATGGG+AGG | 0.501580 | 2_4:-30675072 | None:intergenic |
| TCATATCAAAAGCTTTCGAT+TGG | 0.502770 | 2_4:-30678640 | None:intergenic |
| GATAACGAAGGATGCGCACT+CGG | 0.503690 | 2_4:+30675447 | Msa0324800:CDS |
| AACCATGGGAGTGGTGGTGG+AGG | 0.503749 | 2_4:-30675221 | None:intergenic |
| TTGTGGAGAGAGAAAGAGAG+TGG | 0.504148 | 2_4:-30675000 | None:intergenic |
| CAAACTCTCATCTTTGACAA+TGG | 0.506448 | 2_4:+30674915 | Msa0324800:exon |
| CCGCCTCGGCGCACTTACCA+TGG | 0.513610 | 2_4:+30675317 | Msa0324800:CDS |
| CTCATCTTTGACAATGGAGA+TGG | 0.514518 | 2_4:+30674921 | Msa0324800:exon |
| CTCTCTGCCCTTCACATACG+TGG | 0.515200 | 2_4:+30678104 | Msa0324800:CDS |
| CCTGATAAACCAAATGGGAA+TGG | 0.519168 | 2_4:-30679252 | None:intergenic |
| GAGGGCGGTGCGGAGGAGGA+AGG | 0.519759 | 2_4:-30675190 | None:intergenic |
| GGAAGGGAGGTGGTGTTCGG+CGG | 0.520800 | 2_4:-30675157 | None:intergenic |
| TGTCAGAAGCAAGGTTTGAA+AGG | 0.521753 | 2_4:-30678835 | None:intergenic |
| GGTGTAGACGAGCAGCTAGA+AGG | 0.527981 | 2_4:+30678488 | Msa0324800:CDS |
| CGGAACTATGGTCTAAGTAT+CGG | 0.529829 | 2_4:+30678055 | Msa0324800:CDS |
| AACATGAGGAGCAGTGAGTG+TGG | 0.535051 | 2_4:-30675032 | None:intergenic |
| GGTAAGTGCGCCGAGGCGGA+CGG | 0.536704 | 2_4:-30675313 | None:intergenic |
| CAAAATTTAAATGCTGTAAG+TGG | 0.537765 | 2_4:+30678858 | Msa0324800:CDS |
| AGAAGAAGAAGAATTGGAGA+AGG | 0.538190 | 2_4:-30675541 | None:intergenic |
| TTTGAGATGTTAGTAAATGA+CGG | 0.540262 | 2_4:-30675272 | None:intergenic |
| TTGAACCTGATAAACCAAAT+GGG | 0.542710 | 2_4:-30679257 | None:intergenic |
| ATCATGCACCTCCACGGCGT+TGG | 0.543173 | 2_4:-30675427 | None:intergenic |
| ATATCAGAGTACCTTTCAGT+TGG | 0.546568 | 2_4:+30678419 | Msa0324800:CDS |
| GAGTGTGGAGATAGGTGTTG+TGG | 0.552608 | 2_4:-30675017 | None:intergenic |
| CTCTGATATAACATCTTCGA+TGG | 0.555752 | 2_4:-30678405 | None:intergenic |
| ATAACGAAGGATGCGCACTC+GGG | 0.558272 | 2_4:+30675448 | Msa0324800:CDS |
| GAGGCGGAAACCGTCCGCCT+CGG | 0.565039 | 2_4:+30675303 | Msa0324800:CDS |
| GTATCAAGAAAATTAGAAAG+GGG | 0.565823 | 2_4:+30676523 | Msa0324800:CDS |
| GAGTGGAACCATGGGAGTGG+TGG | 0.567699 | 2_4:-30675227 | None:intergenic |
| TTTAGAGAGAGGTGGTGAAG+GGG | 0.570529 | 2_4:-30678539 | None:intergenic |
| TTTATGATCCACGTATGTGA+AGG | 0.575433 | 2_4:-30678112 | None:intergenic |
| GATTGAGGCGAGTGGAACCA+TGG | 0.576325 | 2_4:-30675236 | None:intergenic |
| CTCTTACCAGAAGTTCAGGA+TGG | 0.580229 | 2_4:+30678786 | Msa0324800:CDS |
| AGATGTTAGTAAATGACGGT+TGG | 0.581031 | 2_4:-30675268 | None:intergenic |
| TATCAAGAAAATTAGAAAGG+GGG | 0.582590 | 2_4:+30676524 | Msa0324800:CDS |
| TACTGACCTCTTGCAGCCAA+AGG | 0.583268 | 2_4:+30676566 | Msa0324800:CDS |
| AGCATACCTTTGGCTGCAAG+AGG | 0.584254 | 2_4:-30676572 | None:intergenic |
| ATGGGAGGTGGAGCAGTCTG+GGG | 0.584392 | 2_4:-30675115 | None:intergenic |
| CCATGGTAAGTGCGCCGAGG+CGG | 0.587717 | 2_4:-30675317 | None:intergenic |
| TTCGTTATCATGCACCTCCA+CGG | 0.591849 | 2_4:-30675433 | None:intergenic |
| CTGGGGAGCAGTAGTGAATG+GGG | 0.591929 | 2_4:-30675098 | None:intergenic |
| GTGGTGGAGGAGGAGGCGGA+GGG | 0.593002 | 2_4:-30675208 | None:intergenic |
| AGGATGCGCACTCGGGATTG+CGG | 0.596707 | 2_4:+30675455 | Msa0324800:CDS |
| CTCGAGAAGATTCTCATCGA+AGG | 0.597081 | 2_4:+30678467 | Msa0324800:CDS |
| ATGCAGAATCACCAACTGAA+AGG | 0.598509 | 2_4:-30678430 | None:intergenic |
| TGATAAACCAAATGGGAATG+GGG | 0.599194 | 2_4:-30679250 | None:intergenic |
| AAAGAGAGTGGAGTGAGTGG+TGG | 0.602147 | 2_4:-30674988 | None:intergenic |
| AGGGCAGAGAGCTACAACGT+TGG | 0.602461 | 2_4:-30678092 | None:intergenic |
| CAGCCATGGTAAGTGCGCCG+AGG | 0.604520 | 2_4:-30675320 | None:intergenic |
| TTATGATCCACGTATGTGAA+GGG | 0.607337 | 2_4:-30678111 | None:intergenic |
| GTACATTGCTTAACATATGG+AGG | 0.607730 | 2_4:+30679202 | Msa0324800:CDS |
| TCATATAGCAATTTAGAGAG+AGG | 0.611256 | 2_4:-30678550 | None:intergenic |
| GGCGAGTGGAACCATGGGAG+TGG | 0.612037 | 2_4:-30675230 | None:intergenic |
| ATCTCAAAATGACGACGAGG+CGG | 0.616525 | 2_4:+30675287 | Msa0324800:CDS |
| GCCGCAGTAGAAAAGCAAAA+CGG | 0.617046 | 2_4:+30675342 | Msa0324800:CDS |
| GGACCCTATCAATTTCGGCT+GGG | 0.618597 | 2_4:+30679039 | Msa0324800:CDS |
| ATTGAGGCGAGTGGAACCAT+GGG | 0.620768 | 2_4:-30675235 | None:intergenic |
| TCAGCATATAAAGTCCGCGC+TGG | 0.621347 | 2_4:+30678581 | Msa0324800:CDS |
| CAAAACGGTTGCAGCAACGA+CGG | 0.625848 | 2_4:+30675357 | Msa0324800:CDS |
| TTACCCAGCCGAAATTGATA+GGG | 0.626489 | 2_4:-30679042 | None:intergenic |
| AAAGAAGGACGGGTGATCTG+TGG | 0.627550 | 2_4:+30676480 | Msa0324800:intron |
| TGCAGTGCTAACCAACGCCG+TGG | 0.628548 | 2_4:+30675416 | Msa0324800:CDS |
| CACTGCACAGAGAGCAACAG+TGG | 0.628872 | 2_4:-30675400 | None:intergenic |
| GGTTGGTGAGTAAGTGATTG+AGG | 0.634271 | 2_4:-30675251 | None:intergenic |
| AGCAGTAGTGAATTTGCACA+AGG | 0.637478 | 2_4:+30675731 | Msa0324800:CDS |
| TGGGGAGCAGTAGTGAATGG+GGG | 0.649651 | 2_4:-30675097 | None:intergenic |
| TATAGCAATTTAGAGAGAGG+TGG | 0.656702 | 2_4:-30678547 | None:intergenic |
| CGACGGTGCAGCGATTCTGG+AGG | 0.659267 | 2_4:+30675374 | Msa0324800:CDS |
| GGGGAGCAGTAGTGAATGGG+GGG | 0.661871 | 2_4:-30675096 | None:intergenic |
| GTGGTCCAAAATTGATTGTG+AGG | 0.672157 | 2_4:+30676499 | Msa0324800:CDS |
| AGTGCTAACCAACGCCGTGG+AGG | 0.677995 | 2_4:+30675419 | Msa0324800:CDS |
| CAGGAAATATCTGTTGTCTG+TGG | 0.685663 | 2_4:+30678314 | Msa0324800:intron |
| AGTTATGAGAGAGAAACATG+AGG | 0.704662 | 2_4:-30675046 | None:intergenic |
| GTGGAGGTGCATGATAACGA+AGG | 0.707863 | 2_4:+30675435 | Msa0324800:CDS |
| GAGTAAGTGATTGAGGCGAG+TGG | 0.709584 | 2_4:-30675244 | None:intergenic |
| AACATCTCAAAATGACGACG+AGG | 0.733547 | 2_4:+30675284 | Msa0324800:CDS |
| CAGATAATAAATCACCAGCG+CGG | 0.796906 | 2_4:-30678595 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTAAAAATTAATTAATTG+AGG | + | chr2_4:30676441-30676460 | Msa0324800:intron | 10.0% |
| !!! | TATATCAATTTTTTATCAAT+TGG | + | chr2_4:30676887-30676906 | Msa0324800:intron | 10.0% |
| !! | AAGAAATAAAAAATTACTTG+TGG | - | chr2_4:30675624-30675643 | None:intergenic | 15.0% |
| !!! | AATCTATAAACTATTTTCAT+AGG | - | chr2_4:30676109-30676128 | None:intergenic | 15.0% |
| !! | TATAATATAAACCATCAATT+TGG | + | chr2_4:30677160-30677179 | Msa0324800:intron | 15.0% |
| !!! | TATTTGTTACATAATTCGTT+AGG | + | chr2_4:30675778-30675797 | Msa0324800:intron | 20.0% |
| !! | TATTCTTAATGTATCAAGTT+AGG | + | chr2_4:30675958-30675977 | Msa0324800:intron | 20.0% |
| !! | ATTCTTAATGTATCAAGTTA+GGG | + | chr2_4:30675959-30675978 | Msa0324800:intron | 20.0% |
| !!! | TTATTTTGATAAGTAACTAG+TGG | + | chr2_4:30676271-30676290 | Msa0324800:intron | 20.0% |
| !! | TGATGAATTGAGAATAATTT+AGG | + | chr2_4:30676301-30676320 | Msa0324800:intron | 20.0% |
| !! | GATGAATTGAGAATAATTTA+GGG | + | chr2_4:30676302-30676321 | Msa0324800:intron | 20.0% |
| !! | TCATTATATGTCTATTGTTT+AGG | + | chr2_4:30676330-30676349 | Msa0324800:intron | 20.0% |
| !! | AGTTGTGTAAACATTTAATT+TGG | - | chr2_4:30676386-30676405 | None:intergenic | 20.0% |
| !! | AGTATCAAGAAAATTAGAAA+GGG | + | chr2_4:30676522-30676541 | Msa0324800:CDS | 20.0% |
| !! | TTTATTAAATCCTAGGATTA+TGG | + | chr2_4:30676864-30676883 | Msa0324800:intron | 20.0% |
| !! | GAAATTAAGTCAAAAAAATG+TGG | - | chr2_4:30677247-30677266 | None:intergenic | 20.0% |
| !! | CTTCATTATTATACAAGTAA+GGG | + | chr2_4:30677442-30677461 | Msa0324800:intron | 20.0% |
| !! | TTCAAGATATATTATTTCCA+AGG | - | chr2_4:30677692-30677711 | None:intergenic | 20.0% |
| !!! | TGGATAGATTTTGTATTAAA+AGG | - | chr2_4:30677727-30677746 | None:intergenic | 20.0% |
| !! | AGTTTCCTAAATTCATAAAT+GGG | - | chr2_4:30677821-30677840 | None:intergenic | 20.0% |
| !! | ACAATTTCATCTAATTTATG+AGG | - | chr2_4:30677891-30677910 | None:intergenic | 20.0% |
| !!! | AATTTGTATTTGGCTTTTTA+GGG | + | chr2_4:30678021-30678040 | Msa0324800:intron | 20.0% |
| !!! | ATTGATATTCTAGTTTAGTT+AGG | + | chr2_4:30678154-30678173 | Msa0324800:intron | 20.0% |
| !! | CTAATATTGAATTATTGTTC+AGG | + | chr2_4:30678295-30678314 | Msa0324800:intron | 20.0% |
| !!! | TAAGTTTCTTAATGTTGATT+TGG | + | chr2_4:30678811-30678830 | Msa0324800:CDS | 20.0% |
| !! | AAAAAAATTCACTAGATGTT+CGG | + | chr2_4:30679071-30679090 | Msa0324800:CDS | 20.0% |
| !!! | TTATTGGCTTATATATGTTA+TGG | + | chr2_4:30679226-30679245 | Msa0324800:CDS | 20.0% |
| !! | TTTGAGATGTTAGTAAATGA+CGG | - | chr2_4:30675275-30675294 | None:intergenic | 25.0% |
| !!! | TGTTTAGAATTTTGAGTGAA+TGG | - | chr2_4:30675600-30675619 | None:intergenic | 25.0% |
| ! | TACTTATCAAAATAAGAGAG+TGG | - | chr2_4:30676266-30676285 | None:intergenic | 25.0% |
| !! | TGATGATATGCTTAGATTTT+TGG | + | chr2_4:30676416-30676435 | Msa0324800:intron | 25.0% |
| !!! | GATTTTTTGCATGAAAAAGA+AGG | + | chr2_4:30676465-30676484 | Msa0324800:intron | 25.0% |
| ! | GAGTATCAAGAAAATTAGAA+AGG | + | chr2_4:30676521-30676540 | Msa0324800:CDS | 25.0% |
| ! | GTATCAAGAAAATTAGAAAG+GGG | + | chr2_4:30676523-30676542 | Msa0324800:CDS | 25.0% |
| ! | TATCAAGAAAATTAGAAAGG+GGG | + | chr2_4:30676524-30676543 | Msa0324800:CDS | 25.0% |
| !! | ATAAATTTGAAGCATACCTT+TGG | - | chr2_4:30676585-30676604 | None:intergenic | 25.0% |
| ! | AAAGGAATAATTATATGCTG+TGG | + | chr2_4:30676756-30676775 | Msa0324800:intron | 25.0% |
| !!! | AGTTGGTTTTATTAAATCCT+AGG | + | chr2_4:30676857-30676876 | Msa0324800:intron | 25.0% |
| ! | AATTGATATACCATAATCCT+AGG | - | chr2_4:30676877-30676896 | None:intergenic | 25.0% |
| ! | TCATGATGCTATTAATTAGT+GGG | + | chr2_4:30676911-30676930 | Msa0324800:intron | 25.0% |
| ! | AGAACAAAACTAACCAAAAT+AGG | - | chr2_4:30676957-30676976 | None:intergenic | 25.0% |
| ! | TGACTTAATTTCATGAGTTT+AGG | + | chr2_4:30677255-30677274 | Msa0324800:intron | 25.0% |
| !!! | TGTCTTACATGATTACTTTT+AGG | + | chr2_4:30677414-30677433 | Msa0324800:intron | 25.0% |
| ! | CCTTACTTGTATAATAATGA+AGG | - | chr2_4:30677444-30677463 | None:intergenic | 25.0% |
| ! | CCTTCATTATTATACAAGTA+AGG | + | chr2_4:30677441-30677460 | Msa0324800:intron | 25.0% |
| !! | TTTTCTCTACCATAATATAC+AGG | - | chr2_4:30677479-30677498 | None:intergenic | 25.0% |
| ! | TTTATTGTATAGTATCTCCT+TGG | + | chr2_4:30677672-30677691 | Msa0324800:intron | 25.0% |
| ! | CAGTTTCCTAAATTCATAAA+TGG | - | chr2_4:30677822-30677841 | None:intergenic | 25.0% |
| ! | TTCTAGTCTCAATTTGTATT+TGG | + | chr2_4:30678011-30678030 | Msa0324800:intron | 25.0% |
| !!! | CAATTTGTATTTGGCTTTTT+AGG | + | chr2_4:30678020-30678039 | Msa0324800:intron | 25.0% |
| !! | TCAATATTAGTTTCACTTCT+GGG | - | chr2_4:30678285-30678304 | None:intergenic | 25.0% |
| !! | TTCAATATTAGTTTCACTTC+TGG | - | chr2_4:30678286-30678305 | None:intergenic | 25.0% |
| ! | CAAAATTTAAATGCTGTAAG+TGG | + | chr2_4:30678858-30678877 | Msa0324800:CDS | 25.0% |
| ! | AAAAAATTCACTAGATGTTC+GGG | + | chr2_4:30679072-30679091 | Msa0324800:CDS | 25.0% |
| ! | TTTTTGAACATGCTTTCTCT+TGG | + | chr2_4:30675478-30675497 | Msa0324800:CDS | 30.0% |
| AAGTAGAGAAGAAGAAGAAT+TGG | - | chr2_4:30675550-30675569 | None:intergenic | 30.0% | |
| ! | CAGATAGATTGTGGTATTTT+TGG | + | chr2_4:30675707-30675726 | Msa0324800:intron | 30.0% |
| !!! | ATGATGCACGTTTTAATTGA+AGG | - | chr2_4:30675924-30675943 | None:intergenic | 30.0% |
| TCAAATAAGTCAATCCATGT+AGG | - | chr2_4:30675985-30676004 | None:intergenic | 30.0% | |
| TTGAGTTTATCTACTGACAT+AGG | + | chr2_4:30676001-30676020 | Msa0324800:intron | 30.0% | |
| TTATACACAAGTGCTTATCA+TGG | + | chr2_4:30676176-30676195 | Msa0324800:intron | 30.0% | |
| AATAAGCTGTATATCCAAAC+AGG | + | chr2_4:30676223-30676242 | Msa0324800:intron | 30.0% | |
| ATAAGCTGTATATCCAAACA+GGG | + | chr2_4:30676224-30676243 | Msa0324800:intron | 30.0% | |
| ! | AGAGTGGAAATTTAAGACTA+GGG | - | chr2_4:30676250-30676269 | None:intergenic | 30.0% |
| ! | TCTATTGTTTAGGACCAAAT+TGG | + | chr2_4:30676340-30676359 | Msa0324800:intron | 30.0% |
| ! | TTTTGCATGAAAAAGAAGGA+CGG | + | chr2_4:30676469-30676488 | Msa0324800:intron | 30.0% |
| ! | ATACTCCTCACAATCAATTT+TGG | - | chr2_4:30676507-30676526 | None:intergenic | 30.0% |
| !!! | CGTATTAGTTTTTCATGCAT+TGG | + | chr2_4:30676611-30676630 | Msa0324800:intron | 30.0% |
| ATAATTATTCCTTTGCTGCT+TGG | - | chr2_4:30676750-30676769 | None:intergenic | 30.0% | |
| GAATAGATGGAATGTTGTAA+TGG | + | chr2_4:30676801-30676820 | Msa0324800:intron | 30.0% | |
| CTCATGATGCTATTAATTAG+TGG | + | chr2_4:30676910-30676929 | Msa0324800:intron | 30.0% | |
| ! | TGTATCTTTGAGTCCTATTT+TGG | + | chr2_4:30676941-30676960 | Msa0324800:intron | 30.0% |
| CTAGATGATTTCTATATCAC+TGG | + | chr2_4:30676978-30676997 | Msa0324800:intron | 30.0% | |
| TAAGTCAAAAAAATGTGGCA+TGG | - | chr2_4:30677242-30677261 | None:intergenic | 30.0% | |
| TAATTTCATGAGTTTAGGCT+TGG | + | chr2_4:30677260-30677279 | Msa0324800:intron | 30.0% | |
| GACTTGAATCCTGTATATTA+TGG | + | chr2_4:30677467-30677486 | Msa0324800:intron | 30.0% | |
| AATATATGCTACATATCGAG+TGG | - | chr2_4:30677751-30677770 | None:intergenic | 30.0% | |
| TCTTGAAATACAATGACAAC+AGG | - | chr2_4:30677785-30677804 | None:intergenic | 30.0% | |
| TTAGGAAACTGTCAACTAAA+AGG | + | chr2_4:30677831-30677850 | Msa0324800:intron | 30.0% | |
| ! | ATATTACAGAGAGCATATCT+GGG | - | chr2_4:30678234-30678253 | None:intergenic | 30.0% |
| TATAACATCTTCGATGGAAT+CGG | - | chr2_4:30678402-30678421 | None:intergenic | 30.0% | |
| TCATATAGCAATTTAGAGAG+AGG | - | chr2_4:30678553-30678572 | None:intergenic | 30.0% | |
| TCATATCAAAAGCTTTCGAT+TGG | - | chr2_4:30678643-30678662 | None:intergenic | 30.0% | |
| TAACAAAAAATATGCAGCAC+TGG | - | chr2_4:30678672-30678691 | None:intergenic | 30.0% | |
| !!! | TGCTGCATATTTTTTGTTAC+TGG | + | chr2_4:30678673-30678692 | Msa0324800:CDS | 30.0% |
| ! | TAAATTTTGTGTCAGAAGCA+AGG | - | chr2_4:30678847-30678866 | None:intergenic | 30.0% |
| ! | TTTAGAGCCTGTATGTTAAA+TGG | + | chr2_4:30678896-30678915 | Msa0324800:CDS | 30.0% |
| GATTTGACCATTTAACATAC+AGG | - | chr2_4:30678906-30678925 | None:intergenic | 30.0% | |
| CCTTGCATGATTTCAAAAAA+TGG | - | chr2_4:30679021-30679040 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGAAATCATGCA+AGG | + | chr2_4:30679018-30679037 | Msa0324800:CDS | 30.0% |
| !! | GTAACACATATTTTTCAGCT+TGG | + | chr2_4:30679178-30679197 | Msa0324800:CDS | 30.0% |
| CTTAACATATGGAGGTTTAT+TGG | + | chr2_4:30679210-30679229 | Msa0324800:CDS | 30.0% | |
| TTGAACCTGATAAACCAAAT+GGG | - | chr2_4:30679260-30679279 | None:intergenic | 30.0% | |
| TTTGAACCTGATAAACCAAA+TGG | - | chr2_4:30679261-30679280 | None:intergenic | 30.0% | |
| CAAACTCTCATCTTTGACAA+TGG | + | chr2_4:30674915-30674934 | Msa0324800:exon | 35.0% | |
| AGTTATGAGAGAGAAACATG+AGG | - | chr2_4:30675049-30675068 | None:intergenic | 35.0% | |
| AGATGTTAGTAAATGACGGT+TGG | - | chr2_4:30675271-30675290 | None:intergenic | 35.0% | |
| AAGAATTGGAGAAGGAGAAT+CGG | - | chr2_4:30675536-30675555 | None:intergenic | 35.0% | |
| AGAAGAAGAAGAATTGGAGA+AGG | - | chr2_4:30675544-30675563 | None:intergenic | 35.0% | |
| ! | TGTGTTTTGCAGATAGATTG+TGG | + | chr2_4:30675698-30675717 | Msa0324800:intron | 35.0% |
| GACATGTGTTAGTAATGTGT+CGG | + | chr2_4:30675892-30675911 | Msa0324800:intron | 35.0% | |
| ACATGTGTTAGTAATGTGTC+GGG | + | chr2_4:30675893-30675912 | Msa0324800:intron | 35.0% | |
| ! | GAGAGTGGAAATTTAAGACT+AGG | - | chr2_4:30676251-30676270 | None:intergenic | 35.0% |
| GAATATCACTCTCTCCAATT+TGG | - | chr2_4:30676357-30676376 | None:intergenic | 35.0% | |
| TTTGCATGAAAAAGAAGGAC+GGG | + | chr2_4:30676470-30676489 | Msa0324800:intron | 35.0% | |
| GATAAACAAACTAGTACGAG+TGG | + | chr2_4:30676644-30676663 | Msa0324800:intron | 35.0% | |
| ATAGCAACAGTGTGAATAGA+TGG | + | chr2_4:30676788-30676807 | Msa0324800:intron | 35.0% | |
| ! | TTACTAGCTGAAGTGAGTTT+TGG | + | chr2_4:30676834-30676853 | Msa0324800:intron | 35.0% |
| TGATTTCTATATCACTGGAG+TGG | + | chr2_4:30676983-30677002 | Msa0324800:intron | 35.0% | |
| TGATGTTCATGGTTATGTGT+AGG | + | chr2_4:30677010-30677029 | Msa0324800:intron | 35.0% | |
| GATGTGCAAGTAATGACAAA+AGG | - | chr2_4:30677087-30677106 | None:intergenic | 35.0% | |
| ! | TAAACCATCAATTTGGTGAG+TGG | + | chr2_4:30677167-30677186 | Msa0324800:intron | 35.0% |
| ATTACCACTCACCAAATTGA+TGG | - | chr2_4:30677174-30677193 | None:intergenic | 35.0% | |
| AGTCATTAACCCCATTGTAT+GGG | - | chr2_4:30677305-30677324 | None:intergenic | 35.0% | |
| TAGTCATTAACCCCATTGTA+TGG | - | chr2_4:30677306-30677325 | None:intergenic | 35.0% | |
| TCCTCTGTATTAATGTCCAT+AGG | + | chr2_4:30677333-30677352 | Msa0324800:intron | 35.0% | |
| ACCTATGGACATTAATACAG+AGG | - | chr2_4:30677337-30677356 | None:intergenic | 35.0% | |
| TTATCACTGTCATTGCTCAT+TGG | - | chr2_4:30677371-30677390 | None:intergenic | 35.0% | |
| GACAGTGATAAATGAAGTTG+TGG | + | chr2_4:30677380-30677399 | Msa0324800:intron | 35.0% | |
| CCAAAATTGAGACAAGTTAC+AGG | - | chr2_4:30677561-30677580 | None:intergenic | 35.0% | |
| !! | CCTGTAACTTGTCTCAATTT+TGG | + | chr2_4:30677558-30677577 | Msa0324800:intron | 35.0% |
| CCATTGAAAAAGAGATACAG+TGG | - | chr2_4:30677629-30677648 | None:intergenic | 35.0% | |
| !!! | CCACTGTATCTCTTTTTCAA+TGG | + | chr2_4:30677626-30677645 | Msa0324800:intron | 35.0% |
| TCCTGCCCATTTATGAATTT+AGG | + | chr2_4:30677813-30677832 | Msa0324800:intron | 35.0% | |
| TCCTAAATTCATAAATGGGC+AGG | - | chr2_4:30677817-30677836 | None:intergenic | 35.0% | |
| TCAAACAAGATCTGAGAAAG+AGG | - | chr2_4:30677957-30677976 | None:intergenic | 35.0% | |
| !! | TTTTTAGGGAACGAGACAAT+CGG | + | chr2_4:30678035-30678054 | Msa0324800:intron | 35.0% |
| TTATGATCCACGTATGTGAA+GGG | - | chr2_4:30678114-30678133 | None:intergenic | 35.0% | |
| TTTATGATCCACGTATGTGA+AGG | - | chr2_4:30678115-30678134 | None:intergenic | 35.0% | |
| TCCATGAAATGTTTGACGAA+AGG | - | chr2_4:30678184-30678203 | None:intergenic | 35.0% | |
| ! | TATTACAGAGAGCATATCTG+GGG | - | chr2_4:30678233-30678252 | None:intergenic | 35.0% |
| ! | CATATTACAGAGAGCATATC+TGG | - | chr2_4:30678235-30678254 | None:intergenic | 35.0% |
| ! | GTCTCTGAAGAACTTGTAAT+TGG | - | chr2_4:30678360-30678379 | None:intergenic | 35.0% |
| CTCTGATATAACATCTTCGA+TGG | - | chr2_4:30678408-30678427 | None:intergenic | 35.0% | |
| ! | ATATCAGAGTACCTTTCAGT+TGG | + | chr2_4:30678419-30678438 | Msa0324800:CDS | 35.0% |
| TATAGCAATTTAGAGAGAGG+TGG | - | chr2_4:30678550-30678569 | None:intergenic | 35.0% | |
| !!! | GCATATTTTTTGTTACTGGC+AGG | + | chr2_4:30678677-30678696 | Msa0324800:CDS | 35.0% |
| ! | TTGCATCAGTCGCTAATTTT+TGG | + | chr2_4:30678738-30678757 | Msa0324800:CDS | 35.0% |
| !! | TCAGTCGCTAATTTTTGGAT+AGG | + | chr2_4:30678743-30678762 | Msa0324800:CDS | 35.0% |
| TTAACTCTTACCAGAAGTTC+AGG | + | chr2_4:30678782-30678801 | Msa0324800:CDS | 35.0% | |
| ATGCTGTAAGTGGTCATTAA+TGG | + | chr2_4:30678868-30678887 | Msa0324800:CDS | 35.0% | |
| CAGACATTACTCGTAATGTT+TGG | + | chr2_4:30678975-30678994 | Msa0324800:CDS | 35.0% | |
| AAAAATGGCAATCATAGACG+AGG | - | chr2_4:30679006-30679025 | None:intergenic | 35.0% | |
| CATGAATCTGTGAATAGAAC+TGG | + | chr2_4:30679127-30679146 | Msa0324800:CDS | 35.0% | |
| GGTGTACATTGCTTAACATA+TGG | + | chr2_4:30679199-30679218 | Msa0324800:CDS | 35.0% | |
| GTACATTGCTTAACATATGG+AGG | + | chr2_4:30679202-30679221 | Msa0324800:CDS | 35.0% | |
| TGATAAACCAAATGGGAATG+GGG | - | chr2_4:30679253-30679272 | None:intergenic | 35.0% | |
| CTGATAAACCAAATGGGAAT+GGG | - | chr2_4:30679254-30679273 | None:intergenic | 35.0% | |
| CTCATCTTTGACAATGGAGA+TGG | + | chr2_4:30674921-30674940 | Msa0324800:exon | 40.0% | |
| GGATTATTGGGATTGGGAAT+GGG | - | chr2_4:30675078-30675097 | None:intergenic | 40.0% | |
| TAGTGAATGGGGGGATTATT+GGG | - | chr2_4:30675090-30675109 | None:intergenic | 40.0% | |
| AACATCTCAAAATGACGACG+AGG | + | chr2_4:30675284-30675303 | Msa0324800:CDS | 40.0% | |
| !! | ACCGTTTTGCTTTTCTACTG+CGG | - | chr2_4:30675346-30675365 | None:intergenic | 40.0% |
| AGCAGTAGTGAATTTGCACA+AGG | + | chr2_4:30675731-30675750 | Msa0324800:CDS | 40.0% | |
| ATTGGAGAGAGTGATATTCG+AGG | + | chr2_4:30676358-30676377 | Msa0324800:intron | 40.0% | |
| TTGGAGAGAGTGATATTCGA+GGG | + | chr2_4:30676359-30676378 | Msa0324800:intron | 40.0% | |
| GTGGTCCAAAATTGATTGTG+AGG | + | chr2_4:30676499-30676518 | Msa0324800:CDS | 40.0% | |
| GAAAATTAGAAAGGGGGAAG+AGG | + | chr2_4:30676530-30676549 | Msa0324800:CDS | 40.0% | |
| GATATAGTACCAAGCAGCAA+AGG | + | chr2_4:30676738-30676757 | Msa0324800:intron | 40.0% | |
| ATGGTTATGTGTAGGAGCAA+TGG | + | chr2_4:30677018-30677037 | Msa0324800:intron | 40.0% | |
| TATGTGTAGGAGCAATGGTT+TGG | + | chr2_4:30677023-30677042 | Msa0324800:intron | 40.0% | |
| !!! | TAGGAGCAATGGTTTGGTTT+TGG | + | chr2_4:30677029-30677048 | Msa0324800:intron | 40.0% |
| GTCATTACTTGCACATCTTG+TGG | + | chr2_4:30677090-30677109 | Msa0324800:intron | 40.0% | |
| TTACTTGCACATCTTGTGGT+TGG | + | chr2_4:30677094-30677113 | Msa0324800:intron | 40.0% | |
| ATGTCCATAGGTTGTAGCAA+TGG | + | chr2_4:30677345-30677364 | Msa0324800:intron | 40.0% | |
| GATACAGTGGTTTCTCAGTA+TGG | - | chr2_4:30677616-30677635 | None:intergenic | 40.0% | |
| TATGCTACATATCGAGTGGA+TGG | - | chr2_4:30677747-30677766 | None:intergenic | 40.0% | |
| ATTCATAAATGGGCAGGAAG+AGG | - | chr2_4:30677811-30677830 | None:intergenic | 40.0% | |
| AACAAGATCTGAGAAAGAGG+AGG | - | chr2_4:30677954-30677973 | None:intergenic | 40.0% | |
| CGGAACTATGGTCTAAGTAT+CGG | + | chr2_4:30678055-30678074 | Msa0324800:CDS | 40.0% | |
| TGAAATGTTTGACGAAAGGC+TGG | - | chr2_4:30678180-30678199 | None:intergenic | 40.0% | |
| GCCTTTCGTCAAACATTTCA+TGG | + | chr2_4:30678180-30678199 | Msa0324800:intron | 40.0% | |
| CAGGAAATATCTGTTGTCTG+TGG | + | chr2_4:30678314-30678333 | Msa0324800:intron | 40.0% | |
| ATGCAGAATCACCAACTGAA+AGG | - | chr2_4:30678433-30678452 | None:intergenic | 40.0% | |
| ATTTAGAGAGAGGTGGTGAA+GGG | - | chr2_4:30678543-30678562 | None:intergenic | 40.0% | |
| AATTTAGAGAGAGGTGGTGA+AGG | - | chr2_4:30678544-30678563 | None:intergenic | 40.0% | |
| CAGATAATAAATCACCAGCG+CGG | - | chr2_4:30678598-30678617 | None:intergenic | 40.0% | |
| ! | CGAAAGCTTTTGATATGAGC+AGG | + | chr2_4:30678645-30678664 | Msa0324800:CDS | 40.0% |
| !! | GCTAATTTTTGGATAGGAGC+TGG | + | chr2_4:30678749-30678768 | Msa0324800:CDS | 40.0% |
| TGTCAGAAGCAAGGTTTGAA+AGG | - | chr2_4:30678838-30678857 | None:intergenic | 40.0% | |
| TGCAAGGACCCTATCAATTT+CGG | + | chr2_4:30679034-30679053 | Msa0324800:CDS | 40.0% | |
| TTACCCAGCCGAAATTGATA+GGG | - | chr2_4:30679045-30679064 | None:intergenic | 40.0% | |
| ATTACCCAGCCGAAATTGAT+AGG | - | chr2_4:30679046-30679065 | None:intergenic | 40.0% | |
| CCTGATAAACCAAATGGGAA+TGG | - | chr2_4:30679255-30679274 | None:intergenic | 40.0% | |
| ! | CCATTCCCATTTGGTTTATC+AGG | + | chr2_4:30679252-30679271 | Msa0324800:CDS | 40.0% |
| TTGTGGAGAGAGAAAGAGAG+TGG | - | chr2_4:30675003-30675022 | None:intergenic | 45.0% | |
| TTATTGGGATTGGGAATGGG+AGG | - | chr2_4:30675075-30675094 | None:intergenic | 45.0% | |
| GGGATTATTGGGATTGGGAA+TGG | - | chr2_4:30675079-30675098 | None:intergenic | 45.0% | |
| ATGGGGGGATTATTGGGATT+GGG | - | chr2_4:30675084-30675103 | None:intergenic | 45.0% | |
| AATGGGGGGATTATTGGGAT+TGG | - | chr2_4:30675085-30675104 | None:intergenic | 45.0% | |
| GTAGTGAATGGGGGGATTAT+TGG | - | chr2_4:30675091-30675110 | None:intergenic | 45.0% | |
| !! | GGTTGGTGAGTAAGTGATTG+AGG | - | chr2_4:30675254-30675273 | None:intergenic | 45.0% |
| ATCTCAAAATGACGACGAGG+CGG | + | chr2_4:30675287-30675306 | Msa0324800:CDS | 45.0% | |
| GCCGCAGTAGAAAAGCAAAA+CGG | + | chr2_4:30675342-30675361 | Msa0324800:CDS | 45.0% | |
| TTCGTTATCATGCACCTCCA+CGG | - | chr2_4:30675436-30675455 | None:intergenic | 45.0% | |
| GAATGGAGCTATGCGAAGTT+TGG | - | chr2_4:30675583-30675602 | None:intergenic | 45.0% | |
| GTATCAAGTTAGGGCCTACA+TGG | + | chr2_4:30675968-30675987 | Msa0324800:intron | 45.0% | |
| ! | TTTAAGACTAGGGCCCTGTT+TGG | - | chr2_4:30676240-30676259 | None:intergenic | 45.0% |
| CAAACTAGTACGAGTGGAAG+AGG | + | chr2_4:30676650-30676669 | Msa0324800:intron | 45.0% | |
| GAGTGGAAGAGGAGAAAGTA+TGG | + | chr2_4:30676661-30676680 | Msa0324800:intron | 45.0% | |
| !!! | GCTGAAGTGAGTTTTGGAGT+TGG | + | chr2_4:30676840-30676859 | Msa0324800:intron | 45.0% |
| TGAGTTTAGGCTTGGAGTCT+TGG | + | chr2_4:30677268-30677287 | Msa0324800:intron | 45.0% | |
| AACCCCATTGTATGGGAACA+GGG | - | chr2_4:30677298-30677317 | None:intergenic | 45.0% | |
| TAACCCCATTGTATGGGAAC+AGG | - | chr2_4:30677299-30677318 | None:intergenic | 45.0% | |
| TTGGCCATTGCTACAACCTA+TGG | - | chr2_4:30677352-30677371 | None:intergenic | 45.0% | |
| ACAGTGGTTTCTCAGTATGG+TGG | - | chr2_4:30677613-30677632 | None:intergenic | 45.0% | |
| GAACGAGACAATCGGAACTA+TGG | + | chr2_4:30678043-30678062 | Msa0324800:CDS | 45.0% | |
| CTCGAGAAGATTCTCATCGA+AGG | + | chr2_4:30678467-30678486 | Msa0324800:CDS | 45.0% | |
| TTTAGAGAGAGGTGGTGAAG+GGG | - | chr2_4:30678542-30678561 | None:intergenic | 45.0% | |
| ! | CGCGCTGGTGATTTATTATC+TGG | + | chr2_4:30678596-30678615 | Msa0324800:CDS | 45.0% |
| CTCTTACCAGAAGTTCAGGA+TGG | + | chr2_4:30678786-30678805 | Msa0324800:CDS | 45.0% | |
| CTTACTCCATCCTGAACTTC+TGG | - | chr2_4:30678795-30678814 | None:intergenic | 45.0% | |
| CGGGCTCATGATATCAAAAC+TGG | + | chr2_4:30679091-30679110 | Msa0324800:CDS | 45.0% | |
| TTATGGTCCCCATTCCCATT+TGG | + | chr2_4:30679243-30679262 | Msa0324800:CDS | 45.0% | |
| AAAGAGAGTGGAGTGAGTGG+TGG | - | chr2_4:30674991-30675010 | None:intergenic | 50.0% | |
| GAGAAAGAGAGTGGAGTGAG+TGG | - | chr2_4:30674994-30675013 | None:intergenic | 50.0% | |
| ! | GAGTGTGGAGATAGGTGTTG+TGG | - | chr2_4:30675020-30675039 | None:intergenic | 50.0% |
| AACATGAGGAGCAGTGAGTG+TGG | - | chr2_4:30675035-30675054 | None:intergenic | 50.0% | |
| TCTGGGGAGCAGTAGTGAAT+GGG | - | chr2_4:30675102-30675121 | None:intergenic | 50.0% | |
| ATTGAGGCGAGTGGAACCAT+GGG | - | chr2_4:30675238-30675257 | None:intergenic | 50.0% | |
| GAGTAAGTGATTGAGGCGAG+TGG | - | chr2_4:30675247-30675266 | None:intergenic | 50.0% | |
| CAAAACGGTTGCAGCAACGA+CGG | + | chr2_4:30675357-30675376 | Msa0324800:CDS | 50.0% | |
| ! | GTGGAGGTGCATGATAACGA+AGG | + | chr2_4:30675435-30675454 | Msa0324800:CDS | 50.0% |
| GATAACGAAGGATGCGCACT+CGG | + | chr2_4:30675447-30675466 | Msa0324800:CDS | 50.0% | |
| ATAACGAAGGATGCGCACTC+GGG | + | chr2_4:30675448-30675467 | Msa0324800:CDS | 50.0% | |
| GAGAATCGGTAGCACGCATT+AGG | - | chr2_4:30675522-30675541 | None:intergenic | 50.0% | |
| AAAGAAGGACGGGTGATCTG+TGG | + | chr2_4:30676480-30676499 | Msa0324800:intron | 50.0% | |
| TACTGACCTCTTGCAGCCAA+AGG | + | chr2_4:30676566-30676585 | Msa0324800:CDS | 50.0% | |
| AGCATACCTTTGGCTGCAAG+AGG | - | chr2_4:30676575-30676594 | None:intergenic | 50.0% | |
| GGAGTGGATGCTGATGTTCA+TGG | + | chr2_4:30676999-30677018 | Msa0324800:intron | 50.0% | |
| ACACCCCTGTTCCCATACAA+TGG | + | chr2_4:30677291-30677310 | Msa0324800:intron | 50.0% | |
| CACCCCTGTTCCCATACAAT+GGG | + | chr2_4:30677292-30677311 | Msa0324800:intron | 50.0% | |
| ACCCCTGTTCCCATACAATG+GGG | + | chr2_4:30677293-30677312 | Msa0324800:intron | 50.0% | |
| ACCCCATTGTATGGGAACAG+GGG | - | chr2_4:30677297-30677316 | None:intergenic | 50.0% | |
| GTTGTCTGTGGAGATTCGTC+TGG | + | chr2_4:30678326-30678345 | Msa0324800:CDS | 50.0% | |
| TCAGCATATAAAGTCCGCGC+TGG | + | chr2_4:30678581-30678600 | Msa0324800:CDS | 50.0% | |
| AGGACCCTATCAATTTCGGC+TGG | + | chr2_4:30679038-30679057 | Msa0324800:CDS | 50.0% | |
| GGACCCTATCAATTTCGGCT+GGG | + | chr2_4:30679039-30679058 | Msa0324800:CDS | 50.0% | |
| GGAGCAGTGAGTGTGGAGAT+AGG | - | chr2_4:30675028-30675047 | None:intergenic | 55.0% | |
| TTGGGATTGGGAATGGGAGG+TGG | - | chr2_4:30675072-30675091 | None:intergenic | 55.0% | |
| TGGGGAGCAGTAGTGAATGG+GGG | - | chr2_4:30675100-30675119 | None:intergenic | 55.0% | |
| CTGGGGAGCAGTAGTGAATG+GGG | - | chr2_4:30675101-30675120 | None:intergenic | 55.0% | |
| GTCTGGGGAGCAGTAGTGAA+TGG | - | chr2_4:30675103-30675122 | None:intergenic | 55.0% | |
| AATGGGAGGTGGAGCAGTCT+GGG | - | chr2_4:30675119-30675138 | None:intergenic | 55.0% | |
| GGAGAGGGGGATTGAGGAAT+GGG | - | chr2_4:30675136-30675155 | None:intergenic | 55.0% | |
| AGGAGAGGGGGATTGAGGAA+TGG | - | chr2_4:30675137-30675156 | None:intergenic | 55.0% | |
| GATTGAGGCGAGTGGAACCA+TGG | - | chr2_4:30675239-30675258 | None:intergenic | 55.0% | |
| ! | CTTTTCTACTGCGGCAGCCA+TGG | - | chr2_4:30675337-30675356 | None:intergenic | 55.0% |
| CACTGCACAGAGAGCAACAG+TGG | - | chr2_4:30675403-30675422 | None:intergenic | 55.0% | |
| AGGGCAGAGAGCTACAACGT+TGG | - | chr2_4:30678095-30678114 | None:intergenic | 55.0% | |
| CTCTCTGCCCTTCACATACG+TGG | + | chr2_4:30678104-30678123 | Msa0324800:CDS | 55.0% | |
| GGTGTAGACGAGCAGCTAGA+AGG | + | chr2_4:30678488-30678507 | Msa0324800:CDS | 55.0% | |
| GGGGAGCAGTAGTGAATGGG+GGG | - | chr2_4:30675099-30675118 | None:intergenic | 60.0% | |
| ATGGGAGGTGGAGCAGTCTG+GGG | - | chr2_4:30675118-30675137 | None:intergenic | 60.0% | |
| GAATGGGAGGTGGAGCAGTC+TGG | - | chr2_4:30675120-30675139 | None:intergenic | 60.0% | |
| GGGGATTGAGGAATGGGAGG+TGG | - | chr2_4:30675130-30675149 | None:intergenic | 60.0% | |
| GAGGGGGATTGAGGAATGGG+AGG | - | chr2_4:30675133-30675152 | None:intergenic | 60.0% | |
| GGAGGAAGGGAGGTGGTGTT+CGG | - | chr2_4:30675163-30675182 | None:intergenic | 60.0% | |
| GGAAGGAGGTGGAGGAGGAA+GGG | - | chr2_4:30675176-30675195 | None:intergenic | 60.0% | |
| AGGAAGGAGGTGGAGGAGGA+AGG | - | chr2_4:30675177-30675196 | None:intergenic | 60.0% | |
| !! | AACCATGGGAGTGGTGGTGG+AGG | - | chr2_4:30675224-30675243 | None:intergenic | 60.0% |
| TGGAACCATGGGAGTGGTGG+TGG | - | chr2_4:30675227-30675246 | None:intergenic | 60.0% | |
| GAGTGGAACCATGGGAGTGG+TGG | - | chr2_4:30675230-30675249 | None:intergenic | 60.0% | |
| CAACGACGGTGCAGCGATTC+TGG | + | chr2_4:30675371-30675390 | Msa0324800:CDS | 60.0% | |
| TGCAGTGCTAACCAACGCCG+TGG | + | chr2_4:30675416-30675435 | Msa0324800:CDS | 60.0% | |
| AGTGCTAACCAACGCCGTGG+AGG | + | chr2_4:30675419-30675438 | Msa0324800:CDS | 60.0% | |
| ATCATGCACCTCCACGGCGT+TGG | - | chr2_4:30675430-30675449 | None:intergenic | 60.0% | |
| AGGATGCGCACTCGGGATTG+CGG | + | chr2_4:30675455-30675474 | Msa0324800:CDS | 60.0% | |
| TGGTGTTCGGCGGAGGAGAG+GGG | - | chr2_4:30675150-30675169 | None:intergenic | 65.0% | |
| GTGGTGTTCGGCGGAGGAGA+GGG | - | chr2_4:30675151-30675170 | None:intergenic | 65.0% | |
| GGAAGGGAGGTGGTGTTCGG+CGG | - | chr2_4:30675160-30675179 | None:intergenic | 65.0% | |
| AGGTGGAGGAGGAAGGGAGG+TGG | - | chr2_4:30675170-30675189 | None:intergenic | 65.0% | |
| AGGAGGTGGAGGAGGAAGGG+AGG | - | chr2_4:30675173-30675192 | None:intergenic | 65.0% | |
| GAGGAGGAAGGAGGTGGAGG+AGG | - | chr2_4:30675181-30675200 | None:intergenic | 65.0% | |
| !! | AGTGGTGGTGGAGGAGGAGG+CGG | - | chr2_4:30675215-30675234 | None:intergenic | 65.0% |
| !! | CATGGGAGTGGTGGTGGAGG+AGG | - | chr2_4:30675221-30675240 | None:intergenic | 65.0% |
| CTCCTCCACCACCACTCCCA+TGG | + | chr2_4:30675219-30675238 | Msa0324800:CDS | 65.0% | |
| GGCGAGTGGAACCATGGGAG+TGG | - | chr2_4:30675233-30675252 | None:intergenic | 65.0% | |
| CCATGGTAAGTGCGCCGAGG+CGG | - | chr2_4:30675320-30675339 | None:intergenic | 65.0% | |
| CAGCCATGGTAAGTGCGCCG+AGG | - | chr2_4:30675323-30675342 | None:intergenic | 65.0% | |
| CGACGGTGCAGCGATTCTGG+AGG | + | chr2_4:30675374-30675393 | Msa0324800:CDS | 65.0% | |
| GGCGGAGGAGAGGGGGATTG+AGG | - | chr2_4:30675142-30675161 | None:intergenic | 70.0% | |
| GGTGTTCGGCGGAGGAGAGG+GGG | - | chr2_4:30675149-30675168 | None:intergenic | 70.0% | |
| GGTGGTGTTCGGCGGAGGAG+AGG | - | chr2_4:30675152-30675171 | None:intergenic | 70.0% | |
| AGGGAGGTGGTGTTCGGCGG+AGG | - | chr2_4:30675157-30675176 | None:intergenic | 70.0% | |
| GCGGAGGAGGAAGGAGGTGG+AGG | - | chr2_4:30675184-30675203 | None:intergenic | 70.0% | |
| GGTGCGGAGGAGGAAGGAGG+TGG | - | chr2_4:30675187-30675206 | None:intergenic | 70.0% | |
| ! | GTGGTGGAGGAGGAGGCGGA+GGG | - | chr2_4:30675211-30675230 | None:intergenic | 70.0% |
| !! | GGGAGTGGTGGTGGAGGAGG+AGG | - | chr2_4:30675218-30675237 | None:intergenic | 70.0% |
| GAGGCGGAAACCGTCCGCCT+CGG | + | chr2_4:30675303-30675322 | Msa0324800:CDS | 70.0% | |
| GGTAAGTGCGCCGAGGCGGA+CGG | - | chr2_4:30675316-30675335 | None:intergenic | 70.0% | |
| CCGCCTCGGCGCACTTACCA+TGG | + | chr2_4:30675317-30675336 | Msa0324800:CDS | 70.0% | |
| GGCGGTGCGGAGGAGGAAGG+AGG | - | chr2_4:30675190-30675209 | None:intergenic | 75.0% | |
| GAGGGCGGTGCGGAGGAGGA+AGG | - | chr2_4:30675193-30675212 | None:intergenic | 75.0% | |
| GTGGAGGAGGAGGCGGAGGG+CGG | - | chr2_4:30675208-30675227 | None:intergenic | 75.0% | |
| !! | GGTGGTGGAGGAGGAGGCGG+AGG | - | chr2_4:30675212-30675231 | None:intergenic | 75.0% |
| ! | GGAGGAGGCGGAGGGCGGTG+CGG | - | chr2_4:30675203-30675222 | None:intergenic | 80.0% |
| ! | GGCGGAGGGCGGTGCGGAGG+AGG | - | chr2_4:30675197-30675216 | None:intergenic | 85.0% |
| ! | GGAGGCGGAGGGCGGTGCGG+AGG | - | chr2_4:30675200-30675219 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 30674910 | 30679318 | 30674910 | ID=Msa0324800;Name=Msa0324800 |
| chr2_4 | mRNA | 30674910 | 30679318 | 30674910 | ID=Msa0324800-mRNA-1;Parent=Msa0324800;Name=Msa0324800-mRNA-1;_AED=0.01;_eAED=0.01;_QI=24|1|0.8|1|1|1|5|0|646 |
| chr2_4 | exon | 30674910 | 30675626 | 30674910 | ID=Msa0324800-mRNA-1:exon:10250;Parent=Msa0324800-mRNA-1 |
| chr2_4 | exon | 30675710 | 30675752 | 30675710 | ID=Msa0324800-mRNA-1:exon:10251;Parent=Msa0324800-mRNA-1 |
| chr2_4 | exon | 30676484 | 30676587 | 30676484 | ID=Msa0324800-mRNA-1:exon:10252;Parent=Msa0324800-mRNA-1 |
| chr2_4 | exon | 30678042 | 30678140 | 30678042 | ID=Msa0324800-mRNA-1:exon:10253;Parent=Msa0324800-mRNA-1 |
| chr2_4 | exon | 30678317 | 30679318 | 30678317 | ID=Msa0324800-mRNA-1:exon:10254;Parent=Msa0324800-mRNA-1 |
| chr2_4 | five_prime_UTR | 30674910 | 30674933 | 30674910 | ID=Msa0324800-mRNA-1:five_prime_utr;Parent=Msa0324800-mRNA-1 |
| chr2_4 | CDS | 30674934 | 30675626 | 30674934 | ID=Msa0324800-mRNA-1:cds;Parent=Msa0324800-mRNA-1 |
| chr2_4 | CDS | 30675710 | 30675752 | 30675710 | ID=Msa0324800-mRNA-1:cds;Parent=Msa0324800-mRNA-1 |
| chr2_4 | CDS | 30676484 | 30676587 | 30676484 | ID=Msa0324800-mRNA-1:cds;Parent=Msa0324800-mRNA-1 |
| chr2_4 | CDS | 30678042 | 30678140 | 30678042 | ID=Msa0324800-mRNA-1:cds;Parent=Msa0324800-mRNA-1 |
| chr2_4 | CDS | 30678317 | 30679318 | 30678317 | ID=Msa0324800-mRNA-1:cds;Parent=Msa0324800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
