AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0325150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0325150 MtrunA17_Chr2g0303101 95.713 1003 43 0 1 1003 1 1003 0.0 1896
Msa0325150 MtrunA17_Chr8g0380981 59.754 1056 353 16 14 1001 2 1053 0.0 1180
Msa0325150 MtrunA17_Chr1g0189211 58.692 581 226 6 27 598 125 700 0.0 695
Msa0325150 MtrunA17_Chr1g0189211 37.603 242 139 3 762 1002 998 1228 2.80e-40 162
Msa0325150 MtrunA17_Chr7g0261401 44.295 596 308 8 13 590 78 667 1.23e-158 489
Msa0325150 MtrunA17_Chr5g0397501 40.749 427 205 8 154 568 288 678 4.67e-87 306
Msa0325150 MtrunA17_Chr5g0397501 54.054 74 30 2 47 120 23 92 3.03e-14 77.8
Msa0325150 MtrunA17_Chr5g0410721 35.222 406 178 10 49 440 86 420 3.85e-59 218
Msa0325150 MtrunA17_Chr3g0116441 34.074 405 194 10 52 445 18 360 5.77e-56 212
Msa0325150 MtrunA17_Chr1g0164731 29.373 606 317 18 48 631 41 557 1.07e-54 201
Msa0325150 MtrunA17_Chr1g0164761 31.450 407 186 11 48 445 4 326 3.88e-47 178
Msa0325150 MtrunA17_Chr1g0199511 39.574 235 138 3 264 495 295 528 4.63e-43 171
Msa0325150 MtrunA17_Chr7g0214951 40.870 115 43 4 294 400 104 201 8.97e-16 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0325150 AT1G30810.3 63.350 603 204 6 4 597 6 600 0.0 743
Msa0325150 AT1G30810.3 52.514 179 75 4 766 942 648 818 1.16e-48 187
Msa0325150 AT1G30810.2 63.350 603 204 6 4 597 6 600 0.0 743
Msa0325150 AT1G30810.2 52.514 179 75 4 766 942 648 818 1.16e-48 187
Msa0325150 AT1G30810.1 63.350 603 204 6 4 597 6 600 0.0 743
Msa0325150 AT1G30810.1 52.514 179 75 4 766 942 648 818 1.16e-48 187
Msa0325150 AT4G20400.1 60.274 584 219 4 8 585 12 588 0.0 719
Msa0325150 AT4G20400.1 39.013 223 115 3 782 1000 746 951 2.19e-40 162
Msa0325150 AT2G34880.1 57.823 588 221 9 7 585 14 583 0.0 695
Msa0325150 AT2G34880.1 44.550 211 106 4 738 943 602 806 1.16e-43 171
Msa0325150 AT4G20400.2 61.654 532 191 4 60 585 7 531 0.0 665
Msa0325150 AT4G20400.2 39.013 223 115 3 782 1000 689 894 2.50e-40 161
Msa0325150 AT1G08620.2 56.724 580 242 3 33 605 127 704 0.0 655
Msa0325150 AT1G08620.2 38.222 225 123 2 762 979 974 1189 1.02e-40 163
Msa0325150 AT1G08620.3 56.724 580 242 3 33 605 141 718 0.0 655
Msa0325150 AT1G08620.3 38.222 225 123 2 762 979 988 1203 1.13e-40 163
Msa0325150 AT1G08620.4 56.724 580 242 3 33 605 127 704 0.0 655
Msa0325150 AT1G08620.4 38.222 225 123 2 762 979 974 1189 1.02e-40 163
Msa0325150 AT1G08620.1 56.724 580 242 3 33 605 127 704 0.0 655
Msa0325150 AT1G08620.1 38.222 225 123 2 762 979 974 1189 1.02e-40 163
Msa0325150 AT2G38950.1 39.840 625 322 11 22 628 76 664 1.78e-137 430
Msa0325150 AT1G63490.1 40.566 424 207 7 160 573 38 426 4.80e-91 316
Msa0325150 AT1G63490.2 40.566 424 207 7 160 573 291 679 7.75e-90 315
Msa0325150 AT1G63490.2 52.174 69 29 2 52 120 31 95 6.65e-12 70.5
Msa0325150 AT1G63490.4 40.566 424 207 7 160 573 291 679 8.01e-90 315
Msa0325150 AT1G63490.4 52.174 69 29 2 52 120 31 95 6.71e-12 70.5
Msa0325150 AT5G46910.2 33.855 511 236 19 49 542 100 525 1.04e-61 223
Msa0325150 AT5G46910.1 33.855 511 236 19 49 542 100 525 2.77e-61 224
Msa0325150 AT3G48430.1 31.648 455 263 11 52 495 20 437 1.98e-46 182
Msa0325150 AT5G04240.1 38.723 235 140 3 264 495 263 496 3.67e-41 165
Msa0325150 AT1G63490.3 36.555 238 128 4 341 573 1 220 1.34e-37 153

Find 230 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCGGATCAGTATGCACTTTC+TGG 0.098787 2_4:-31564956 Msa0325150:CDS
GCAATATGCTAGCCACTTTA+AGG 0.112299 2_4:-31565293 Msa0325150:CDS
CGGAGGGCTCCCTTCGGTTT+TGG 0.158102 2_4:+31565212 None:intergenic
AGTTCTTACTAAGGCATTTA+AGG 0.159985 2_4:-31563934 Msa0325150:intron
AACAGGTGCTTCATCAATTA+TGG 0.174076 2_4:+31565787 None:intergenic
GACTTGGAAACTGGAGTATT+TGG 0.209261 2_4:-31565019 Msa0325150:CDS
AGAGCTTCTGAAAAGCATTA+AGG 0.235189 2_4:-31562252 Msa0325150:CDS
AATTTAACAGAAGAAATTTC+TGG 0.244522 2_4:-31561552 Msa0325150:three_prime_UTR
TTCTTAAGGAGAAAGATATT+TGG 0.254609 2_4:-31565540 Msa0325150:CDS
GTGAAGCCTAGATGAAATTT+TGG 0.255816 2_4:-31561529 Msa0325150:three_prime_UTR
TTCTGTCAAGCCTATAAGTT+TGG 0.258215 2_4:-31562929 Msa0325150:CDS
ACAACAGATCCCAAACTTAT+AGG 0.275338 2_4:+31562919 None:intergenic
CCCTCATCTTTAAGAATTGA+TGG 0.280365 2_4:+31564266 None:intergenic
GTAATTGATGCTGGACTTCT+AGG 0.284250 2_4:-31562689 Msa0325150:CDS
GTTTGAAAATCTAACCTCTT+TGG 0.284374 2_4:+31566685 None:intergenic
CCCTTTACCGTCCATTGTTC+AGG 0.287730 2_4:-31562210 Msa0325150:intron
TCTCCTACATGTTCCTGATT+TGG 0.290265 2_4:+31565411 None:intergenic
ACCAGATCATTGAGTAGATT+TGG 0.300651 2_4:+31564428 None:intergenic
TTCACTTGCTCTTGAGTTAT+GGG 0.304398 2_4:-31563508 Msa0325150:CDS
TGAAAGTCTTAGAAGTAAAA+AGG 0.310711 2_4:-31566079 Msa0325150:intron
TGCAAAATGCATCTGTAATT+AGG 0.314618 2_4:+31561483 None:intergenic
TGTAAAGTTCAACGGCATTT+AGG 0.320348 2_4:+31564105 None:intergenic
TCTTCGGCACAAACTTAAAA+AGG 0.321850 2_4:-31566121 Msa0325150:CDS
GGTTCCACCTTGCCTTCTTA+AGG 0.324646 2_4:-31565554 Msa0325150:CDS
CACTTTAAGGAATGCTACTT+TGG 0.328409 2_4:-31565280 Msa0325150:CDS
ATCTCAATTCTTTCCGACTT+TGG 0.331855 2_4:-31561623 Msa0325150:three_prime_UTR
AAAGCAGAAGCATGGCTTCC+AGG 0.340144 2_4:+31564497 None:intergenic
TCTTAAGGAGAAAGATATTT+GGG 0.341769 2_4:-31565539 Msa0325150:CDS
CTTATATTGCAGGTGTACTA+TGG 0.342714 2_4:-31565046 Msa0325150:intron
GATTGTCCCTCCAGCTTGTT+GGG 0.347186 2_4:-31565575 Msa0325150:CDS
CAGTTATCGATGACACTTCC+TGG 0.347721 2_4:+31561900 None:intergenic
CTGAATACGGGTGGAAAATT+CGG 0.351486 2_4:+31565510 None:intergenic
TTAAGACAGGAATATTTATC+AGG 0.352956 2_4:+31563633 None:intergenic
ATTCACTTGCTCTTGAGTTA+TGG 0.353505 2_4:-31563509 Msa0325150:CDS
GAGCTTCTGAAAAGCATTAA+GGG 0.354337 2_4:-31562251 Msa0325150:CDS
TGGTATTAATTTGACTGATC+AGG 0.358063 2_4:-31561838 Msa0325150:CDS
CTTGCAGAGCTAACTCTTCA+TGG 0.358880 2_4:-31564008 Msa0325150:CDS
GGATTGTCCCTCCAGCTTGT+TGG 0.359013 2_4:-31565576 Msa0325150:CDS
CACAATTCTTGTACATTTGA+TGG 0.361785 2_4:-31563090 Msa0325150:CDS
TTGAATGAAACAAATGGAAT+TGG 0.365763 2_4:-31566711 Msa0325150:exon
GGTACTTCCTCGAACAAATC+AGG 0.367457 2_4:+31564449 None:intergenic
ACCACTCTGGGTTCAATTGT+GGG 0.368663 2_4:-31564181 Msa0325150:CDS
ATTCAGAAAGCTTTGTAGAT+AGG 0.374275 2_4:-31561657 Msa0325150:exon
GAATTTGCCTTTCAAGGTTA+AGG 0.376693 2_4:-31561435 Msa0325150:three_prime_UTR
ACTTTGGTGATTCAAAGATA+TGG 0.377593 2_4:-31564529 Msa0325150:CDS
TCACTATCTATACTTTCATT+TGG 0.382622 2_4:+31563306 None:intergenic
GTAAATCAATTTGCTGAATA+CGG 0.383823 2_4:+31565497 None:intergenic
TTTATTCATGCAAACCTCAT+TGG 0.385890 2_4:+31563452 None:intergenic
TATGGAGCGGACTTGGAAAC+TGG 0.386530 2_4:-31565028 Msa0325150:CDS
AATTTGACTGATCAGGCTAT+AGG 0.392697 2_4:-31561831 Msa0325150:CDS
TACCACTCTGGGTTCAATTG+TGG 0.397229 2_4:-31564182 Msa0325150:CDS
ACATAGCTACAGATTCTTGT+TGG 0.399476 2_4:+31562719 None:intergenic
AAATTGCTTGAAGCACTAGA+AGG 0.399639 2_4:-31563534 Msa0325150:CDS
ATTCCAAAACAAAGTACAAA+AGG 0.408341 2_4:+31561454 None:intergenic
CTACTGAATCACCCTTGTTA+TGG 0.412634 2_4:+31563232 None:intergenic
GGTGTACTATGGAGCGGACT+TGG 0.413893 2_4:-31565035 Msa0325150:CDS
AGTTTGGGATCTGTTGTTCA+TGG 0.417652 2_4:-31562913 Msa0325150:CDS
AAACTGGTTGTGCGGGAACC+AGG 0.420135 2_4:-31563398 Msa0325150:CDS
TACTTTCATTTGGCGCACTA+AGG 0.423017 2_4:+31563316 None:intergenic
ACAAAAGATTTGTTCTGCTT+CGG 0.424771 2_4:-31563578 Msa0325150:CDS
CCTGAACAATGGACGGTAAA+GGG 0.427142 2_4:+31562210 None:intergenic
TATCGCACTGTTCAGCACTC+TGG 0.427845 2_4:-31564233 Msa0325150:CDS
TGTTGCAGATATCAGCTAGA+TGG 0.432281 2_4:-31565832 Msa0325150:intron
TTTGTTCTGCTCGTGCGAAA+TGG 0.433769 2_4:-31563601 Msa0325150:CDS
AGGAAATTGAAGGTGAATAC+TGG 0.438638 2_4:-31565186 Msa0325150:CDS
TCTGTCAAGCCTATAAGTTT+GGG 0.440166 2_4:-31562928 Msa0325150:CDS
ATCGCACTGTTCAGCACTCT+GGG 0.442116 2_4:-31564232 Msa0325150:CDS
ACTTTAAGGAATGCTACTTT+GGG 0.447518 2_4:-31565279 Msa0325150:CDS
CGTAGAAGGAACTCCAAATC+AGG 0.448607 2_4:-31565424 Msa0325150:CDS
AATATATTGAATGAAACAAA+TGG 0.449727 2_4:-31566717 None:intergenic
ATCCATACCTAAGGGTTATC+CGG 0.453266 2_4:-31564975 Msa0325150:CDS
TGCAATAAATGATAAAATGC+AGG 0.455377 2_4:-31561338 Msa0325150:three_prime_UTR
ACCAAATCTACTCAATGATC+TGG 0.458628 2_4:-31564429 Msa0325150:intron
ATTTAACAGAAGAAATTTCT+GGG 0.459599 2_4:-31561551 Msa0325150:three_prime_UTR
CCTCCTCGGAGGGCTCCCTT+CGG 0.462526 2_4:+31565206 None:intergenic
GAGAAATACGGATTTCAAGC+AGG 0.463346 2_4:-31565343 Msa0325150:CDS
TTCACCTTCAATTTCCTCCT+CGG 0.463503 2_4:+31565192 None:intergenic
GAAGGAAGAGAAAACGTAGA+AGG 0.464877 2_4:-31565438 Msa0325150:CDS
AAATATCTTTCTCCTTAAGA+AGG 0.467623 2_4:+31565542 None:intergenic
TAAGGCATCATCCATACCTA+AGG 0.467936 2_4:-31564984 Msa0325150:CDS
GTCATCAGTGTGCAGAGTAT+TGG 0.471615 2_4:-31561947 Msa0325150:CDS
ACTTGAGGTGCATCTGCAAA+TGG 0.473346 2_4:-31563061 Msa0325150:CDS
TCGCTTAATTATCTACACTT+TGG 0.473473 2_4:-31564545 Msa0325150:CDS
GTTTCTGAAGTAATTGATGC+TGG 0.475315 2_4:-31562698 Msa0325150:CDS
ATGTCCAAGTGTCACTTTCA+CGG 0.479048 2_4:-31562372 Msa0325150:CDS
GTAGATAATTAAGCGAATAC+AGG 0.481716 2_4:+31564552 None:intergenic
GACTTATATCTATCTGCTGT+CGG 0.481917 2_4:-31563669 Msa0325150:CDS
CAAAGTAGCATTCCTTAAAG+TGG 0.482363 2_4:+31565281 None:intergenic
ATTAGCTTCAGAAGCTGACT+TGG 0.482425 2_4:+31565384 None:intergenic
ACAGGTGCTTCATCAATTAT+GGG 0.484369 2_4:+31565788 None:intergenic
TGCTGAACAGTGCGATATAC+CGG 0.484919 2_4:+31564239 None:intergenic
CAAGTACCAAAATTTCATCT+AGG 0.484948 2_4:+31561523 None:intergenic
CCTACATATGCCATAAGGTT+CGG 0.488486 2_4:+31565597 None:intergenic
TTGAAAGATGCAAATGAAGA+TGG 0.489132 2_4:-31565256 Msa0325150:CDS
TTTGAAGGAAGTGACATCTC+AGG 0.493396 2_4:-31564887 Msa0325150:CDS
GACAAGGGTCATGAAGAAAC+TGG 0.493740 2_4:-31563414 Msa0325150:CDS
CAGAAGTTTCATCATGCTCT+AGG 0.495798 2_4:-31563119 Msa0325150:CDS
ATGACACTTCCTGGAGATGT+AGG 0.496695 2_4:+31561909 None:intergenic
GGTGATTCAAAGATATGGTA+TGG 0.498257 2_4:-31564524 Msa0325150:CDS
AGAAGCTACTGTGGGAAAGA+TGG 0.500316 2_4:-31563957 Msa0325150:CDS
CCTTCAATTTCCTCCTCGGA+GGG 0.502244 2_4:+31565196 None:intergenic
ACCTGAACAATGGACGGTAA+AGG 0.503678 2_4:+31562209 None:intergenic
GAAACTGGAGTATTTGGAAG+TGG 0.503820 2_4:-31565013 Msa0325150:CDS
TAAATCAATTTGCTGAATAC+GGG 0.504028 2_4:+31565498 None:intergenic
AAAGGTTTCCCTACATCTCC+AGG 0.510314 2_4:-31561918 Msa0325150:CDS
GCACTTGCCTGATTTGTTCG+AGG 0.511183 2_4:-31564456 Msa0325150:CDS
TTCAGCGACTTAAAATGAGT+TGG 0.516196 2_4:+31563747 None:intergenic
CATGCAAACCTCATTGGCCT+CGG 0.519400 2_4:+31563458 None:intergenic
ATCAGTATGCACTTTCTGGT+TGG 0.522030 2_4:-31564952 Msa0325150:CDS
CCGAACCTTATGGCATATGT+AGG 0.522757 2_4:-31565597 Msa0325150:CDS
AAACCTCAGCAGATAAGTGT+TGG 0.523110 2_4:-31562349 Msa0325150:CDS
CCAGAAAGTGCATACTGATC+CGG 0.524034 2_4:+31564956 None:intergenic
TCTGAAGCTGATGAGAAATA+CGG 0.525343 2_4:-31565355 Msa0325150:CDS
AACCTCAGCAGATAAGTGTT+GGG 0.527827 2_4:-31562348 Msa0325150:CDS
CAACAGAAGATGAAGGTGAT+AGG 0.529116 2_4:+31563148 None:intergenic
AAGCATGCAATATATCCAAA+AGG 0.529982 2_4:-31562874 Msa0325150:intron
ATCACGGAGCAAAGGAGTCT+CGG 0.530238 2_4:-31562296 Msa0325150:CDS
GCAAAAGCCTTAACCTTGAA+AGG 0.531481 2_4:+31561428 None:intergenic
AATAACTTCCCGCGACTACC+AGG 0.532194 2_4:-31564923 Msa0325150:CDS
GTTGCAGATATCAGCTAGAT+GGG 0.534301 2_4:-31565831 Msa0325150:intron
AAGATATGGTATGGAGTACC+TGG 0.536762 2_4:-31564515 Msa0325150:CDS
TTCCAAAACAAAGTACAAAA+GGG 0.537388 2_4:+31561455 None:intergenic
CTGACAGGCAAGGATAAAGA+TGG 0.539724 2_4:-31563793 Msa0325150:intron
AATTGCTTGAAGCACTAGAA+GGG 0.541172 2_4:-31563533 Msa0325150:CDS
ATGACTATTTGACCTATCCC+TGG 0.541294 2_4:+31563380 None:intergenic
ATCCGGATAACCCTTAGGTA+TGG 0.541772 2_4:+31564973 None:intergenic
ACTTTCATTTGGCGCACTAA+GGG 0.542373 2_4:+31563317 None:intergenic
ACCTTCAATTTCCTCCTCGG+AGG 0.543087 2_4:+31565195 None:intergenic
CATGAAGAAACTGGTTGTGC+GGG 0.545026 2_4:-31563405 Msa0325150:CDS
ACTGGTATCTTGAGCTTCGA+TGG 0.545639 2_4:+31561968 None:intergenic
CAAGGTGGAACCCAACAAGC+TGG 0.548195 2_4:+31565565 None:intergenic
CGCGAGTATATCTTTGACAC+AGG 0.548519 2_4:-31562980 Msa0325150:CDS
TACTGATCCGGATAACCCTT+AGG 0.548758 2_4:+31564968 None:intergenic
ATACTCTGCACACTGATGAC+TGG 0.551099 2_4:+31561950 None:intergenic
AAGAATGATACCTTGAAAAG+TGG 0.551294 2_4:+31562665 None:intergenic
ATCAATTTGCTGAATACGGG+TGG 0.552299 2_4:+31565501 None:intergenic
CAAAGATATACTCGCGCTCG+TGG 0.552527 2_4:+31562987 None:intergenic
ATATGCCATAAGGTTCGGCT+AGG 0.552916 2_4:+31565602 None:intergenic
TCCATCAATTCTTAAAGATG+AGG 0.553059 2_4:-31564267 Msa0325150:CDS
CCCTCCGAGGAGGAAATTGA+AGG 0.553304 2_4:-31565196 Msa0325150:CDS
TAAAATGTTTCAGGTTACAA+TGG 0.554254 2_4:-31562399 Msa0325150:intron
ACAATCCTACATATGCCATA+AGG 0.556142 2_4:+31565592 None:intergenic
CCATGCGTTAACCAATCGAC+AGG 0.557899 2_4:+31564128 None:intergenic
TTGGCGCACTAAGGGTTACA+AGG 0.559643 2_4:+31563325 None:intergenic
GATGAAATCAATACTACGAA+AGG 0.560207 2_4:-31561775 Msa0325150:CDS
ATGGGCCGACATGCTTCAGA+TGG 0.562965 2_4:+31565806 None:intergenic
TGACACTTCCTGGAGATGTA+GGG 0.563083 2_4:+31561910 None:intergenic
TCTTAAAGATGAGGGAGTGC+CGG 0.563411 2_4:-31564258 Msa0325150:CDS
CTTCTTCTAACAGCATGTTG+AGG 0.565189 2_4:-31564582 Msa0325150:intron
TTATATTATTACCTGAACAA+TGG 0.565686 2_4:+31562199 None:intergenic
CATGAAGAGTTAGCTCTGCA+AGG 0.567369 2_4:+31564009 None:intergenic
GCAATAAATGATAAAATGCA+GGG 0.567915 2_4:-31561337 Msa0325150:three_prime_UTR
GATCAGGCTATAGGCAACAT+AGG 0.569394 2_4:-31561822 Msa0325150:CDS
AATTCTTGTACATTTGATGG+TGG 0.570192 2_4:-31563087 Msa0325150:CDS
ACAAGAGGTGGATGGAGACA+AGG 0.570762 2_4:-31563430 Msa0325150:CDS
TCTTTCTCCTTAAGAAGGCA+AGG 0.571859 2_4:+31565547 None:intergenic
CAAACTAGCATGCTTAAGAC+AGG 0.572943 2_4:+31563620 None:intergenic
CTTCGGAATGGTTTCTGCCG+AGG 0.574133 2_4:-31563475 Msa0325150:CDS
AATGGAATTGGATGCCAAAG+AGG 0.575222 2_4:-31566699 Msa0325150:intron
GAAAGATGGAGTTCTTACTA+AGG 0.575446 2_4:-31563943 Msa0325150:CDS
TTCCCAACACTTATCTGCTG+AGG 0.577377 2_4:+31562346 None:intergenic
AACTGGTTGTGCGGGAACCA+GGG 0.577770 2_4:-31563397 Msa0325150:CDS
GTACAGAACCTGGTAGTCGC+GGG 0.577977 2_4:+31564915 None:intergenic
CCATCAATTCTTAAAGATGA+GGG 0.579325 2_4:-31564266 Msa0325150:CDS
AATACCTCAACTTCATCCGT+TGG 0.582292 2_4:+31565148 None:intergenic
GTCTTCACAACAGAAGATGA+AGG 0.582987 2_4:+31563141 None:intergenic
CTAGTTCCATGGCTGTATGT+TGG 0.583650 2_4:-31564860 Msa0325150:CDS
GATAGTCATAGACAAAGATA+AGG 0.583705 2_4:-31563271 Msa0325150:CDS
ATTATTACCTGAACAATGGA+CGG 0.583899 2_4:+31562203 None:intergenic
TTGCATGAATAAACAAGAGG+TGG 0.585885 2_4:-31563442 Msa0325150:CDS
GTTGTGCGGGAACCAGGGAT+AGG 0.585912 2_4:-31563392 Msa0325150:CDS
ATGACAAAATCACGGAGCAA+AGG 0.586554 2_4:-31562304 Msa0325150:CDS
TGAATGTAGCTCCTGTCGAT+TGG 0.588215 2_4:-31564139 Msa0325150:CDS
GGTTTCTGCCGAGGCCAATG+AGG 0.593742 2_4:-31563466 Msa0325150:CDS
TCTCAGGAGTACTAGTTCCA+TGG 0.597637 2_4:-31564871 Msa0325150:CDS
TTGTAAACTGTAAAGTTCAA+CGG 0.597924 2_4:+31564097 None:intergenic
AGAGCTAACTCTTCATGGAA+AGG 0.598601 2_4:-31564003 Msa0325150:CDS
ATAGTAACCTCCAAAACCGA+AGG 0.600438 2_4:-31565222 Msa0325150:CDS
TTAAAATGACTATCCAAAGT+CGG 0.604161 2_4:+31561610 None:intergenic
TGCCATAAGGTTCGGCTAGG+GGG 0.604755 2_4:+31565605 None:intergenic
TTGAAATGGAGAAGCTACTG+TGG 0.606319 2_4:-31563966 Msa0325150:CDS
TCATGAAGAAACTGGTTGTG+CGG 0.608614 2_4:-31563406 Msa0325150:CDS
ATTGCTTGAAGCACTAGAAG+GGG 0.609732 2_4:-31563532 Msa0325150:CDS
CAAGAGGTGGATGGAGACAA+GGG 0.610819 2_4:-31563429 Msa0325150:CDS
CATCTTCTAAAGCAGAAGCA+TGG 0.611444 2_4:+31564489 None:intergenic
ATGAAGAGTTAGCTCTGCAA+GGG 0.613991 2_4:+31564010 None:intergenic
ATGAATAAACAAGAGGTGGA+TGG 0.615332 2_4:-31563438 Msa0325150:CDS
GTTTCCGTGAAAGTGACACT+TGG 0.616503 2_4:+31562368 None:intergenic
GCAGCCAACGGATGAAGTTG+AGG 0.619008 2_4:-31565152 Msa0325150:intron
TATTGCAGATAGCCATAACA+AGG 0.619186 2_4:-31563244 Msa0325150:CDS
AGAAATACGGATTTCAAGCA+GGG 0.620076 2_4:-31565342 Msa0325150:CDS
AGTACAGAACCTGGTAGTCG+CGG 0.621060 2_4:+31564914 None:intergenic
AAAGTCTTTAAACGTGAAGT+CGG 0.621637 2_4:+31565318 None:intergenic
GAGACTAAATGACAAAATCA+CGG 0.622915 2_4:-31562312 Msa0325150:CDS
TATGCCATAAGGTTCGGCTA+GGG 0.624920 2_4:+31565603 None:intergenic
TGAAATGGAGAAGCTACTGT+GGG 0.625781 2_4:-31563965 Msa0325150:CDS
ATTAGGTCAATGATGATCGA+GGG 0.628372 2_4:+31561500 None:intergenic
CCTGTCGATTGGTTAACGCA+TGG 0.630097 2_4:-31564128 Msa0325150:CDS
CACATGCCAACATACAGCCA+TGG 0.631048 2_4:+31564854 None:intergenic
AAGGCATCATCCATACCTAA+GGG 0.631276 2_4:-31564983 Msa0325150:CDS
CCGAAGGGAGCCCTCCGAGG+AGG 0.631741 2_4:-31565206 Msa0325150:CDS
AATTAGGTCAATGATGATCG+AGG 0.632605 2_4:+31561499 None:intergenic
GCGGATAGTTGAGCAGCCAA+CGG 0.632994 2_4:-31565164 Msa0325150:CDS
GGATAAAGATGGAAGAAGAG+AGG 0.633004 2_4:-31563782 Msa0325150:CDS
TAACAAGGGTGATTCAGTAG+AGG 0.633767 2_4:-31563229 Msa0325150:CDS
TGATACTAAAGAAATTAACT+CGG 0.634395 2_4:+31562747 None:intergenic
TCAAAACTTAGTACAGAACC+TGG 0.635235 2_4:+31564905 None:intergenic
ATGCCATAAGGTTCGGCTAG+GGG 0.638535 2_4:+31565604 None:intergenic
ACTCCAAATCAGGAACATGT+AGG 0.644682 2_4:-31565414 Msa0325150:CDS
AAACCGAAGGGAGCCCTCCG+AGG 0.649446 2_4:-31565209 Msa0325150:CDS
CAGGCTATAGGCAACATAGG+AGG 0.652485 2_4:-31561819 Msa0325150:CDS
GTGGAACCCAACAAGCTGGA+GGG 0.653359 2_4:+31565569 None:intergenic
GGGATCCATCTGAAGCATGT+CGG 0.653861 2_4:-31565811 Msa0325150:CDS
GGTGGAACCCAACAAGCTGG+AGG 0.654238 2_4:+31565568 None:intergenic
TAGGGCTACTTGAACAACAT+AGG 0.657747 2_4:+31561871 None:intergenic
CATGTGACAATGATGTCTTA+CGG 0.661845 2_4:+31564072 None:intergenic
ATTTGATGGTGGAAAACTTG+AGG 0.662789 2_4:-31563076 Msa0325150:CDS
TTCTCCTTAAGAAGGCAAGG+TGG 0.663402 2_4:+31565550 None:intergenic
AGTCATAGACAAAGATAAGG+CGG 0.664329 2_4:-31563268 Msa0325150:CDS
ATTGCAGGTGTACTATGGAG+CGG 0.672819 2_4:-31565041 Msa0325150:intron
CTGACGCACAATGTTCTGAG+TGG 0.675673 2_4:-31561710 Msa0325150:CDS
TAGTAACCTCCAAAACCGAA+GGG 0.678632 2_4:-31565221 Msa0325150:CDS
AAATTGAAGGTGAATACTGG+CGG 0.682225 2_4:-31565183 Msa0325150:CDS
GCAGAGTATTGGAATCACAA+AGG 0.682618 2_4:-31561936 Msa0325150:CDS
CTGTTGTTCATGGAAAGCTG+TGG 0.696529 2_4:-31562903 Msa0325150:CDS
GGTTTGCATGAATAAACAAG+AGG 0.696654 2_4:-31563445 Msa0325150:CDS
ACCCACAATTGAACCCAGAG+TGG 0.709442 2_4:+31564180 None:intergenic
TCGCACTGTTCAGCACTCTG+GGG 0.722408 2_4:-31564231 Msa0325150:CDS
AAATGCAGGGAAACTAGACA+CGG 0.729073 2_4:-31561324 Msa0325150:three_prime_UTR
ATTGCAGATAGCCATAACAA+GGG 0.737688 2_4:-31563243 Msa0325150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTAATTTTAAAATGTTT+TGG - chr2_4:31565226-31565245 Msa0325150:CDS 10.0%
!!! TGTTTAATTTACAACTATAT+TGG - chr2_4:31562906-31562925 Msa0325150:CDS 15.0%
!! AAAGTTCAAAAAATTTGAAA+TGG - chr2_4:31564039-31564058 Msa0325150:CDS 15.0%
!! AAAAGACAATTAAAAAAGAA+CGG + chr2_4:31564128-31564147 None:intergenic 15.0%
!!! TTTTAATTTAGTCATAAGTT+AGG - chr2_4:31566426-31566445 Msa0325150:intron 15.0%
!! TTCAACAACAAAACAAATAT+TGG + chr2_4:31562082-31562101 None:intergenic 20.0%
!!! TCATTGACTACATTATATAT+TGG + chr2_4:31562117-31562136 None:intergenic 20.0%
!!! TAAAAAAGTACTTCAATAGT+TGG + chr2_4:31562264-31562283 None:intergenic 20.0%
!! TTTGTTTACTCTGTTTATTT+AGG - chr2_4:31562354-31562373 Msa0325150:CDS 20.0%
!! AATATGTCAACATAAATAAG+TGG + chr2_4:31563329-31563348 None:intergenic 20.0%
!! AAGAAGAAAATAGTGATAAT+GGG + chr2_4:31563423-31563442 None:intergenic 20.0%
!!! TTGTTCTTATTTAGTTATGA+AGG - chr2_4:31564160-31564179 Msa0325150:CDS 20.0%
!!! ACTTTTTCAACTACAATTTT+GGG + chr2_4:31565004-31565023 None:intergenic 20.0%
!! TGATACTAAAGAAATTAACT+CGG + chr2_4:31565275-31565294 None:intergenic 20.0%
!! TAAAAAACTAACAAAGTTTG+TGG + chr2_4:31565463-31565482 None:intergenic 20.0%
!!! GATCGATTTATAGATTTTTT+CGG + chr2_4:31565539-31565558 None:intergenic 20.0%
!!! GTTTTATGGTTGTATTTATT+TGG - chr2_4:31565569-31565588 Msa0325150:CDS 20.0%
!! TTATATTATTACCTGAACAA+TGG + chr2_4:31565823-31565842 None:intergenic 20.0%
!! GAACTAATACATGTATAATT+TGG - chr2_4:31565966-31565985 Msa0325150:intron 20.0%
!! CAAATTAATACCAAAAACTT+TGG + chr2_4:31566174-31566193 None:intergenic 20.0%
!! AATTTAACAGAAGAAATTTC+TGG - chr2_4:31566467-31566486 Msa0325150:intron 20.0%
!! ATTTAACAGAAGAAATTTCT+GGG - chr2_4:31566468-31566487 Msa0325150:intron 20.0%
! TTGAATGAAACAAATGGAAT+TGG - chr2_4:31561308-31561327 Msa0325150:three_prime_UTR 25.0%
! TTATCCAAAATCAATGAACA+CGG + chr2_4:31561454-31561473 None:intergenic 25.0%
!! ATGGAGTTTTTATCTTTCAT+AGG - chr2_4:31561597-31561616 Msa0325150:three_prime_UTR 25.0%
!! TGGAGTTTTTATCTTTCATA+GGG - chr2_4:31561598-31561617 Msa0325150:three_prime_UTR 25.0%
!! TTTTTATCTTTCATAGGGTT+TGG - chr2_4:31561603-31561622 Msa0325150:three_prime_UTR 25.0%
!! TTAGAAATTTTCATGTGATG+CGG - chr2_4:31561631-31561650 Msa0325150:three_prime_UTR 25.0%
! ATAAAAAACCGATGCATTAA+TGG + chr2_4:31561809-31561828 None:intergenic 25.0%
! ATGCAAGAATTCTAAGTTAA+TGG + chr2_4:31561860-31561879 None:intergenic 25.0%
!!! GAATTCTTGCATATTTTTTC+AGG - chr2_4:31561868-31561887 Msa0325150:CDS 25.0%
!!! TTTTTACTTCTAAGACTTTC+AGG + chr2_4:31561941-31561960 None:intergenic 25.0%
! TGAAAGTCTTAGAAGTAAAA+AGG - chr2_4:31561940-31561959 Msa0325150:CDS 25.0%
!! GCAAGAAAAGTACAAAATAT+TGG + chr2_4:31562001-31562020 None:intergenic 25.0%
!!! TCTGTTCTTTTTTCATATGT+TGG - chr2_4:31562151-31562170 Msa0325150:intron 25.0%
! AAATATCTTTCTCCTTAAGA+AGG + chr2_4:31562480-31562499 None:intergenic 25.0%
! TTCTTAAGGAGAAAGATATT+TGG - chr2_4:31562479-31562498 Msa0325150:intron 25.0%
! TCTTAAGGAGAAAGATATTT+GGG - chr2_4:31562480-31562499 Msa0325150:intron 25.0%
!!! TAAATCAATTTGCTGAATAC+GGG + chr2_4:31562524-31562543 None:intergenic 25.0%
!!! GTAAATCAATTTGCTGAATA+CGG + chr2_4:31562525-31562544 None:intergenic 25.0%
! AACCTATGAAGAAAAAAAGT+AGG - chr2_4:31562557-31562576 Msa0325150:intron 25.0%
! ACCTATGAAGAAAAAAAGTA+GGG - chr2_4:31562558-31562577 Msa0325150:intron 25.0%
!!! TTACAACTATATTGGTCTTA+AGG - chr2_4:31562914-31562933 Msa0325150:CDS 25.0%
!!! TACAACTATATTGGTCTTAA+GGG - chr2_4:31562915-31562934 Msa0325150:CDS 25.0%
! AACATAAATAAGTGGAATAC+AGG + chr2_4:31563321-31563340 None:intergenic 25.0%
! TGTTGACATATTTCAAATGT+TGG - chr2_4:31563337-31563356 Msa0325150:CDS 25.0%
! GAAGAAGAAAATAGTGATAA+TGG + chr2_4:31563424-31563443 None:intergenic 25.0%
!!! ATTCTGGGAATAGTTTTATA+TGG - chr2_4:31563692-31563711 Msa0325150:CDS 25.0%
! TTGTAAACTGTAAAGTTCAA+CGG + chr2_4:31563925-31563944 None:intergenic 25.0%
! TTAAGACAGGAATATTTATC+AGG + chr2_4:31564389-31564408 None:intergenic 25.0%
! TTATGGGAAAGTAAAAACTT+CGG - chr2_4:31564527-31564546 Msa0325150:CDS 25.0%
! TCACTATCTATACTTTCATT+TGG + chr2_4:31564716-31564735 None:intergenic 25.0%
! ATGTTGTTCAGAGATAAAAA+AGG - chr2_4:31564820-31564839 Msa0325150:intron 25.0%
!!! GACTTTTTCAACTACAATTT+TGG + chr2_4:31565005-31565024 None:intergenic 25.0%
! CTTCAAAAGTAACTAATCAA+TGG + chr2_4:31565208-31565227 None:intergenic 25.0%
!!! ATGTTTTGGTAAACTTTTGA+AGG - chr2_4:31565240-31565259 Msa0325150:CDS 25.0%
!! GATCAACTATATGAGTTTTA+TGG - chr2_4:31565555-31565574 Msa0325150:CDS 25.0%
! CTTATTCCATAAAATGTTTC+AGG - chr2_4:31565611-31565630 Msa0325150:CDS 25.0%
!! TTGTAACCTGAAACATTTTA+TGG + chr2_4:31565620-31565639 None:intergenic 25.0%
!!! TAAAATGTTTCAGGTTACAA+TGG - chr2_4:31565620-31565639 Msa0325150:CDS 25.0%
!!! ATTAAGGGTTTTAGAATGTT+CGG - chr2_4:31565783-31565802 Msa0325150:CDS 25.0%
! TAATACCAAAAACTTTGGTA+GGG + chr2_4:31566169-31566188 None:intergenic 25.0%
! TTAATACCAAAAACTTTGGT+AGG + chr2_4:31566170-31566189 None:intergenic 25.0%
! TTAAAATGACTATCCAAAGT+CGG + chr2_4:31566412-31566431 None:intergenic 25.0%
! TTCCAAAACAAAGTACAAAA+GGG + chr2_4:31566567-31566586 None:intergenic 25.0%
! ATTCCAAAACAAAGTACAAA+AGG + chr2_4:31566568-31566587 None:intergenic 25.0%
! TGCAATAAATGATAAAATGC+AGG - chr2_4:31566681-31566700 Msa0325150:intron 25.0%
! GCAATAAATGATAAAATGCA+GGG - chr2_4:31566682-31566701 Msa0325150:intron 25.0%
GTTTGAAAATCTAACCTCTT+TGG + chr2_4:31561337-31561356 None:intergenic 30.0%
AGAGAAATCATGCATTGTTA+GGG + chr2_4:31561359-31561378 None:intergenic 30.0%
AAGAGAAATCATGCATTGTT+AGG + chr2_4:31561360-31561379 None:intergenic 30.0%
!!! TTATCCGTGTTCATTGATTT+TGG - chr2_4:31561447-31561466 Msa0325150:three_prime_UTR 30.0%
TAACATTGTATCTCTGTTTC+TGG - chr2_4:31561518-31561537 Msa0325150:three_prime_UTR 30.0%
GTCATCTACATATGTGATAT+TGG - chr2_4:31561701-31561720 Msa0325150:CDS 30.0%
! AAGTAAAAAGGTATGTAGCT+AGG - chr2_4:31561952-31561971 Msa0325150:CDS 30.0%
TTCCTATTTGTTCCAAAGAA+CGG + chr2_4:31562023-31562042 None:intergenic 30.0%
TCAATAGTTGGATGAAAAAC+AGG + chr2_4:31562252-31562271 None:intergenic 30.0%
CCTATGAAGAAAAAAAGTAG+GGG - chr2_4:31562559-31562578 Msa0325150:intron 30.0%
AAAGTCTTTAAACGTGAAGT+CGG + chr2_4:31562704-31562723 None:intergenic 30.0%
!! ACTTTAAGGAATGCTACTTT+GGG - chr2_4:31562740-31562759 Msa0325150:CDS 30.0%
TTGAAAGATGCAAATGAAGA+TGG - chr2_4:31562763-31562782 Msa0325150:intron 30.0%
! ATTTGGAAGTGGTTTTTCTA+AGG - chr2_4:31563017-31563036 Msa0325150:CDS 30.0%
GTAGATAATTAAGCGAATAC+AGG + chr2_4:31563470-31563489 None:intergenic 30.0%
TCGCTTAATTATCTACACTT+TGG - chr2_4:31563474-31563493 Msa0325150:CDS 30.0%
! ACTTTGGTGATTCAAAGATA+TGG - chr2_4:31563490-31563509 Msa0325150:CDS 30.0%
CAGAACTTTCACTATATTCT+GGG - chr2_4:31563677-31563696 Msa0325150:CDS 30.0%
TCCATCAATTCTTAAAGATG+AGG - chr2_4:31563752-31563771 Msa0325150:CDS 30.0%
CCATCAATTCTTAAAGATGA+GGG - chr2_4:31563753-31563772 Msa0325150:CDS 30.0%
!! AATTTGTCATTACTTTTCCG+AGG - chr2_4:31563811-31563830 Msa0325150:intron 30.0%
!! ATTTGTCATTACTTTTCCGA+GGG - chr2_4:31563812-31563831 Msa0325150:intron 30.0%
! TCACATGACAAGCTTTTATT+TGG - chr2_4:31563963-31563982 Msa0325150:CDS 30.0%
! AGTTCTTACTAAGGCATTTA+AGG - chr2_4:31564085-31564104 Msa0325150:CDS 30.0%
! TGATTCCTTATATGCTTTTC+TGG - chr2_4:31564190-31564209 Msa0325150:CDS 30.0%
! ACAAAAGATTTGTTCTGCTT+CGG - chr2_4:31564441-31564460 Msa0325150:CDS 30.0%
TTTATTCATGCAAACCTCAT+TGG + chr2_4:31564570-31564589 None:intergenic 30.0%
GATAGTCATAGACAAAGATA+AGG - chr2_4:31564748-31564767 Msa0325150:intron 30.0%
AAAAAAGGAACAAGACAACA+TGG - chr2_4:31564835-31564854 Msa0325150:CDS 30.0%
CACAATTCTTGTACATTTGA+TGG - chr2_4:31564929-31564948 Msa0325150:CDS 30.0%
AATTCTTGTACATTTGATGG+TGG - chr2_4:31564932-31564951 Msa0325150:CDS 30.0%
AAGCATGCAATATATCCAAA+AGG - chr2_4:31565145-31565164 Msa0325150:intron 30.0%
AAGAATGATACCTTGAAAAG+TGG + chr2_4:31565357-31565376 None:intergenic 30.0%
GAGACTAAATGACAAAATCA+CGG - chr2_4:31565707-31565726 Msa0325150:intron 30.0%
ATTATTACCTGAACAATGGA+CGG + chr2_4:31565819-31565838 None:intergenic 30.0%
CTGGATTAACATGCTTATTA+CGG - chr2_4:31565921-31565940 Msa0325150:intron 30.0%
! TGGTATTAATTTGACTGATC+AGG - chr2_4:31566181-31566200 Msa0325150:intron 30.0%
GATGAAATCAATACTACGAA+AGG - chr2_4:31566244-31566263 Msa0325150:intron 30.0%
! ATTCAGAAAGCTTTGTAGAT+AGG - chr2_4:31566362-31566381 Msa0325150:intron 30.0%
CAAGTACCAAAATTTCATCT+AGG + chr2_4:31566499-31566518 None:intergenic 30.0%
TGCAAAATGCATCTGTAATT+AGG + chr2_4:31566539-31566558 None:intergenic 30.0%
!!! CTCTTATCCTCTGTTTTTTG+TGG - chr2_4:31561399-31561418 Msa0325150:three_prime_UTR 35.0%
TTGTGATCCACAAAAAACAG+AGG + chr2_4:31561409-31561428 None:intergenic 35.0%
ACACATAGGTCGAAAAACAA+GGG + chr2_4:31561569-31561588 None:intergenic 35.0%
TTCATGTGATGTGGTTGATT+AGG - chr2_4:31561670-31561689 Msa0325150:CDS 35.0%
! GATGTGGTTGATTAGGTTTT+CGG - chr2_4:31561677-31561696 Msa0325150:CDS 35.0%
CATTTCCTCCATTAATGCAT+CGG - chr2_4:31561798-31561817 Msa0325150:CDS 35.0%
AAAAACCGATGCATTAATGG+AGG + chr2_4:31561806-31561825 None:intergenic 35.0%
!!! TTTTTCAGGATAGTCCTCTT+CGG - chr2_4:31561882-31561901 Msa0325150:CDS 35.0%
!!! TTTTTAAGTTTGTGCCGAAG+AGG + chr2_4:31561899-31561918 None:intergenic 35.0%
TCTTCGGCACAAACTTAAAA+AGG - chr2_4:31561898-31561917 Msa0325150:CDS 35.0%
ACAGGTGCTTCATCAATTAT+GGG + chr2_4:31562234-31562253 None:intergenic 35.0%
AACAGGTGCTTCATCAATTA+TGG + chr2_4:31562235-31562254 None:intergenic 35.0%
CCATATAAACGATACGAAGA+TGG + chr2_4:31562296-31562315 None:intergenic 35.0%
CCATCTTCGTATCGTTTATA+TGG - chr2_4:31562293-31562312 Msa0325150:CDS 35.0%
ACAATCCTACATATGCCATA+AGG + chr2_4:31562430-31562449 None:intergenic 35.0%
!!! CCCCTACTTTTTTTCTTCAT+AGG + chr2_4:31562562-31562581 None:intergenic 35.0%
TGAAGAAAAAAAGTAGGGGA+AGG - chr2_4:31562563-31562582 Msa0325150:intron 35.0%
! TCTGAAGCTGATGAGAAATA+CGG - chr2_4:31562664-31562683 Msa0325150:intron 35.0%
AGAAATACGGATTTCAAGCA+GGG - chr2_4:31562677-31562696 Msa0325150:CDS 35.0%
CAAAGTAGCATTCCTTAAAG+TGG + chr2_4:31562741-31562760 None:intergenic 35.0%
! CACTTTAAGGAATGCTACTT+TGG - chr2_4:31562739-31562758 Msa0325150:CDS 35.0%
AGGAAATTGAAGGTGAATAC+TGG - chr2_4:31562833-31562852 Msa0325150:intron 35.0%
AAATTGAAGGTGAATACTGG+CGG - chr2_4:31562836-31562855 Msa0325150:intron 35.0%
ACGATACACTCTTATATTGC+AGG - chr2_4:31562963-31562982 Msa0325150:CDS 35.0%
CTTATATTGCAGGTGTACTA+TGG - chr2_4:31562973-31562992 Msa0325150:CDS 35.0%
TCAAAACTTAGTACAGAACC+TGG + chr2_4:31563117-31563136 None:intergenic 35.0%
!! GGTTCTGTACTAAGTTTTGA+AGG - chr2_4:31563117-31563136 Msa0325150:CDS 35.0%
! TGTGCTTTTCATCGTTTTGT+TGG - chr2_4:31563184-31563203 Msa0325150:CDS 35.0%
!! GTGCTTTTCATCGTTTTGTT+GGG - chr2_4:31563185-31563204 Msa0325150:CDS 35.0%
! ACAGAGTTTAAGACATGACA+TGG - chr2_4:31563254-31563273 Msa0325150:CDS 35.0%
GGTGATTCAAAGATATGGTA+TGG - chr2_4:31563495-31563514 Msa0325150:CDS 35.0%
ACCAAATCTACTCAATGATC+TGG - chr2_4:31563590-31563609 Msa0325150:CDS 35.0%
ACCAGATCATTGAGTAGATT+TGG + chr2_4:31563594-31563613 None:intergenic 35.0%
CCAGAATATAGTGAAAGTTC+TGG + chr2_4:31563679-31563698 None:intergenic 35.0%
CCAGAACTTTCACTATATTC+TGG - chr2_4:31563676-31563695 Msa0325150:CDS 35.0%
! TATGATTTTCATGTTCACGC+AGG - chr2_4:31563716-31563735 Msa0325150:CDS 35.0%
! CCCTCATCTTTAAGAATTGA+TGG + chr2_4:31563756-31563775 None:intergenic 35.0%
!! TTTGTCATTACTTTTCCGAG+GGG - chr2_4:31563813-31563832 Msa0325150:intron 35.0%
TGTAAAGTTCAACGGCATTT+AGG + chr2_4:31563917-31563936 None:intergenic 35.0%
CATGTGACAATGATGTCTTA+CGG + chr2_4:31563950-31563969 None:intergenic 35.0%
GAAAGATGGAGTTCTTACTA+AGG - chr2_4:31564076-31564095 Msa0325150:CDS 35.0%
! GGTAACCAGAAAAGCATATA+AGG + chr2_4:31564198-31564217 None:intergenic 35.0%
TTCAGCGACTTAAAATGAGT+TGG + chr2_4:31564275-31564294 None:intergenic 35.0%
!! TCATTTTAAGTCGCTGAAGA+TGG - chr2_4:31564277-31564296 Msa0325150:CDS 35.0%
!! CATTTTAAGTCGCTGAAGAT+GGG - chr2_4:31564278-31564297 Msa0325150:CDS 35.0%
GACTTATATCTATCTGCTGT+CGG - chr2_4:31564350-31564369 Msa0325150:intron 35.0%
! AAATTGCTTGAAGCACTAGA+AGG - chr2_4:31564485-31564504 Msa0325150:CDS 35.0%
! AATTGCTTGAAGCACTAGAA+GGG - chr2_4:31564486-31564505 Msa0325150:CDS 35.0%
ATTCACTTGCTCTTGAGTTA+TGG - chr2_4:31564510-31564529 Msa0325150:CDS 35.0%
TTCACTTGCTCTTGAGTTAT+GGG - chr2_4:31564511-31564530 Msa0325150:CDS 35.0%
GGAAAGTAAAAACTTCGGAA+TGG - chr2_4:31564532-31564551 Msa0325150:CDS 35.0%
GGTTTGCATGAATAAACAAG+AGG - chr2_4:31564574-31564593 Msa0325150:intron 35.0%
TTGCATGAATAAACAAGAGG+TGG - chr2_4:31564577-31564596 Msa0325150:intron 35.0%
ATGAATAAACAAGAGGTGGA+TGG - chr2_4:31564581-31564600 Msa0325150:intron 35.0%
AGTCATAGACAAAGATAAGG+CGG - chr2_4:31564751-31564770 Msa0325150:intron 35.0%
TATTGCAGATAGCCATAACA+AGG - chr2_4:31564775-31564794 Msa0325150:intron 35.0%
ATTGCAGATAGCCATAACAA+GGG - chr2_4:31564776-31564795 Msa0325150:intron 35.0%
!! ATTTGATGGTGGAAAACTTG+AGG - chr2_4:31564943-31564962 Msa0325150:CDS 35.0%
TTCTGTCAAGCCTATAAGTT+TGG - chr2_4:31565090-31565109 Msa0325150:intron 35.0%
TCTGTCAAGCCTATAAGTTT+GGG - chr2_4:31565091-31565110 Msa0325150:intron 35.0%
ACAACAGATCCCAAACTTAT+AGG + chr2_4:31565103-31565122 None:intergenic 35.0%
ACATAGCTACAGATTCTTGT+TGG + chr2_4:31565303-31565322 None:intergenic 35.0%
!! GTTTCTGAAGTAATTGATGC+TGG - chr2_4:31565321-31565340 Msa0325150:CDS 35.0%
GTAAACACAGTGCAAAAACA+AGG + chr2_4:31565382-31565401 None:intergenic 35.0%
! AATGCTTTTCAGAAGCTCTA+AGG + chr2_4:31565766-31565785 None:intergenic 35.0%
!! AGAGCTTCTGAAAAGCATTA+AGG - chr2_4:31565767-31565786 Msa0325150:intron 35.0%
!! GAGCTTCTGAAAAGCATTAA+GGG - chr2_4:31565768-31565787 Msa0325150:intron 35.0%
TAATCCAGTTCAACGCAATT+TGG + chr2_4:31565909-31565928 None:intergenic 35.0%
!! ATGTTCCGACTAACTTTTTC+AGG - chr2_4:31566028-31566047 Msa0325150:intron 35.0%
AATTTGACTGATCAGGCTAT+AGG - chr2_4:31566188-31566207 Msa0325150:intron 35.0%
ATCTCAATTCTTTCCGACTT+TGG - chr2_4:31566396-31566415 Msa0325150:intron 35.0%
! GTGAAGCCTAGATGAAATTT+TGG - chr2_4:31566490-31566509 Msa0325150:intron 35.0%
ATTAGGTCAATGATGATCGA+GGG + chr2_4:31566522-31566541 None:intergenic 35.0%
AATTAGGTCAATGATGATCG+AGG + chr2_4:31566523-31566542 None:intergenic 35.0%
!! GACCCTTTTGTACTTTGTTT+TGG - chr2_4:31566562-31566581 Msa0325150:intron 35.0%
!!! GTTTTGGAATTTGCCTTTCA+AGG - chr2_4:31566578-31566597 Msa0325150:intron 35.0%
GAATTTGCCTTTCAAGGTTA+AGG - chr2_4:31566584-31566603 Msa0325150:intron 35.0%
AATGGAATTGGATGCCAAAG+AGG - chr2_4:31561320-31561339 Msa0325150:three_prime_UTR 40.0%
GACACATAGGTCGAAAAACA+AGG + chr2_4:31561570-31561589 None:intergenic 40.0%
TTCATGTGATGCGGTTGATT+AGG - chr2_4:31561640-31561659 Msa0325150:three_prime_UTR 40.0%
! GATGCGGTTGATTAGGTTTT+CGG - chr2_4:31561647-31561666 Msa0325150:exon 40.0%
! GTACTTTTCTTGCCGTTCTT+TGG - chr2_4:31562008-31562027 Msa0325150:intron 40.0%
!! TGCCGTTCTTTGGAACAAAT+AGG - chr2_4:31562018-31562037 Msa0325150:intron 40.0%
TGTTGCAGATATCAGCTAGA+TGG - chr2_4:31562187-31562206 Msa0325150:intron 40.0%
GTTGCAGATATCAGCTAGAT+GGG - chr2_4:31562188-31562207 Msa0325150:intron 40.0%
CCTACATATGCCATAAGGTT+CGG + chr2_4:31562425-31562444 None:intergenic 40.0%
TCTTTCTCCTTAAGAAGGCA+AGG + chr2_4:31562475-31562494 None:intergenic 40.0%
CTGAATACGGGTGGAAAATT+CGG + chr2_4:31562512-31562531 None:intergenic 40.0%
!! ATCAATTTGCTGAATACGGG+TGG + chr2_4:31562521-31562540 None:intergenic 40.0%
GAAGGAAGAGAAAACGTAGA+AGG - chr2_4:31562581-31562600 Msa0325150:intron 40.0%
ACTCCAAATCAGGAACATGT+AGG - chr2_4:31562605-31562624 Msa0325150:intron 40.0%
TCTCCTACATGTTCCTGATT+TGG + chr2_4:31562611-31562630 None:intergenic 40.0%
! ATTAGCTTCAGAAGCTGACT+TGG + chr2_4:31562638-31562657 None:intergenic 40.0%
GAGAAATACGGATTTCAAGC+AGG - chr2_4:31562676-31562695 Msa0325150:CDS 40.0%
! GCAATATGCTAGCCACTTTA+AGG - chr2_4:31562726-31562745 Msa0325150:CDS 40.0%
ATAGTAACCTCCAAAACCGA+AGG - chr2_4:31562797-31562816 Msa0325150:intron 40.0%
TAGTAACCTCCAAAACCGAA+GGG - chr2_4:31562798-31562817 Msa0325150:intron 40.0%
TTCACCTTCAATTTCCTCCT+CGG + chr2_4:31562830-31562849 None:intergenic 40.0%
AATACCTCAACTTCATCCGT+TGG + chr2_4:31562874-31562893 None:intergenic 40.0%
! GACTTGGAAACTGGAGTATT+TGG - chr2_4:31563000-31563019 Msa0325150:CDS 40.0%
! GAAACTGGAGTATTTGGAAG+TGG - chr2_4:31563006-31563025 Msa0325150:CDS 40.0%
! TAAGGCATCATCCATACCTA+AGG - chr2_4:31563035-31563054 Msa0325150:CDS 40.0%
! AAGGCATCATCCATACCTAA+GGG - chr2_4:31563036-31563055 Msa0325150:CDS 40.0%
ATCCATACCTAAGGGTTATC+CGG - chr2_4:31563044-31563063 Msa0325150:CDS 40.0%
! ATCAGTATGCACTTTCTGGT+TGG - chr2_4:31563067-31563086 Msa0325150:CDS 40.0%
TTTGAAGGAAGTGACATCTC+AGG - chr2_4:31563132-31563151 Msa0325150:CDS 40.0%
!! TCATCGTTTTGTTGGGTAAG+TGG - chr2_4:31563192-31563211 Msa0325150:CDS 40.0%
CTTCTTCTAACAGCATGTTG+AGG - chr2_4:31563437-31563456 Msa0325150:CDS 40.0%
! AAGATATGGTATGGAGTACC+TGG - chr2_4:31563504-31563523 Msa0325150:CDS 40.0%
!! CATCTTCTAAAGCAGAAGCA+TGG + chr2_4:31563533-31563552 None:intergenic 40.0%
CCTGCTATACACACAATGAT+AGG + chr2_4:31563639-31563658 None:intergenic 40.0%
CCTATCATTGTGTGTATAGC+AGG - chr2_4:31563636-31563655 Msa0325150:CDS 40.0%
!! TTGTCATTACTTTTCCGAGG+GGG - chr2_4:31563814-31563833 Msa0325150:intron 40.0%
!! GCTTTTATTTGGATCATCGC+TGG - chr2_4:31563974-31563993 Msa0325150:CDS 40.0%
!! ATGAAGAGTTAGCTCTGCAA+GGG + chr2_4:31564012-31564031 None:intergenic 40.0%
AGAGCTAACTCTTCATGGAA+AGG - chr2_4:31564016-31564035 Msa0325150:CDS 40.0%
TTGAAATGGAGAAGCTACTG+TGG - chr2_4:31564053-31564072 Msa0325150:CDS 40.0%
TGAAATGGAGAAGCTACTGT+GGG - chr2_4:31564054-31564073 Msa0325150:CDS 40.0%
GGATAAAGATGGAAGAAGAG+AGG - chr2_4:31564237-31564256 Msa0325150:CDS 40.0%
CAAACTAGCATGCTTAAGAC+AGG + chr2_4:31564402-31564421 None:intergenic 40.0%
! ATTGCTTGAAGCACTAGAAG+GGG - chr2_4:31564487-31564506 Msa0325150:CDS 40.0%
TCATGAAGAAACTGGTTGTG+CGG - chr2_4:31564613-31564632 Msa0325150:intron 40.0%
ATGACTATTTGACCTATCCC+TGG + chr2_4:31564642-31564661 None:intergenic 40.0%
ACTTTCATTTGGCGCACTAA+GGG + chr2_4:31564705-31564724 None:intergenic 40.0%
TACTTTCATTTGGCGCACTA+AGG + chr2_4:31564706-31564725 None:intergenic 40.0%
CTACTGAATCACCCTTGTTA+TGG + chr2_4:31564790-31564809 None:intergenic 40.0%
TAACAAGGGTGATTCAGTAG+AGG - chr2_4:31564790-31564809 Msa0325150:intron 40.0%
CAACAGAAGATGAAGGTGAT+AGG + chr2_4:31564874-31564893 None:intergenic 40.0%
GTCTTCACAACAGAAGATGA+AGG + chr2_4:31564881-31564900 None:intergenic 40.0%
CAGAAGTTTCATCATGCTCT+AGG - chr2_4:31564900-31564919 Msa0325150:CDS 40.0%
! AGTTTGGGATCTGTTGTTCA+TGG - chr2_4:31565106-31565125 Msa0325150:intron 40.0%
! TCACACTACAGCATACCTTT+TGG + chr2_4:31565163-31565182 None:intergenic 40.0%
GTAATTGATGCTGGACTTCT+AGG - chr2_4:31565330-31565349 Msa0325150:CDS 40.0%
!!! ACTTCTAGGACCACTTTTCA+AGG - chr2_4:31565344-31565363 Msa0325150:CDS 40.0%
ACAAAGTTTGTGGCGATGAA+CGG + chr2_4:31565453-31565472 None:intergenic 40.0%
TCAGACATTGATGCAAGTGT+TGG + chr2_4:31565505-31565524 None:intergenic 40.0%
!! ATGTCCAAGTGTCACTTTCA+CGG - chr2_4:31565647-31565666 Msa0325150:intron 40.0%
AAACCTCAGCAGATAAGTGT+TGG - chr2_4:31565670-31565689 Msa0325150:intron 40.0%
AACCTCAGCAGATAAGTGTT+GGG - chr2_4:31565671-31565690 Msa0325150:intron 40.0%
ATGACAAAATCACGGAGCAA+AGG - chr2_4:31565715-31565734 Msa0325150:intron 40.0%
!!! CTTTTCAGAAGCTCTAAGGA+AGG + chr2_4:31565762-31565781 None:intergenic 40.0%
GGTTGAGGTTCAAATCAAAC+AGG + chr2_4:31565888-31565907 None:intergenic 40.0%
AGTTCAACGCAATTTGGTTG+AGG + chr2_4:31565903-31565922 None:intergenic 40.0%
TCAACCAAATTGCGTTGAAC+TGG - chr2_4:31565902-31565921 Msa0325150:intron 40.0%
GATGGCCTGAAAAAGTTAGT+CGG + chr2_4:31566036-31566055 None:intergenic 40.0%
!! GCAGAGTATTGGAATCACAA+AGG - chr2_4:31566083-31566102 Msa0325150:CDS 40.0%
TAGGGCTACTTGAACAACAT+AGG + chr2_4:31566151-31566170 None:intergenic 40.0%
! AGTAGCCCTACCAAAGTTTT+TGG - chr2_4:31566161-31566180 Msa0325150:intron 40.0%
GCAAAAGCCTTAACCTTGAA+AGG + chr2_4:31566594-31566613 None:intergenic 40.0%
! TTCAAGGTTAAGGCTTTTGC+TGG - chr2_4:31566594-31566613 Msa0325150:intron 40.0%
! AAGGCTTTTGCTGGAATCAT+AGG - chr2_4:31566603-31566622 Msa0325150:intron 40.0%
AAATGCAGGGAAACTAGACA+CGG - chr2_4:31566695-31566714 Msa0325150:intron 40.0%
GACCTATGTGTCGAGCTATA+TGG - chr2_4:31561578-31561597 Msa0325150:three_prime_UTR 45.0%
CTCCATATAGCTCGACACAT+AGG + chr2_4:31561583-31561602 None:intergenic 45.0%
! GGTTTTCGGTTCATGTGATG+TGG - chr2_4:31561661-31561680 Msa0325150:exon 45.0%
TATGCCATAAGGTTCGGCTA+GGG + chr2_4:31562419-31562438 None:intergenic 45.0%
ATATGCCATAAGGTTCGGCT+AGG + chr2_4:31562420-31562439 None:intergenic 45.0%
CCGAACCTTATGGCATATGT+AGG - chr2_4:31562422-31562441 Msa0325150:intron 45.0%
TTCTCCTTAAGAAGGCAAGG+TGG + chr2_4:31562472-31562491 None:intergenic 45.0%
CGTAGAAGGAACTCCAAATC+AGG - chr2_4:31562595-31562614 Msa0325150:intron 45.0%
ATTGCAGGTGTACTATGGAG+CGG - chr2_4:31562978-31562997 Msa0325150:CDS 45.0%
ATCCGGATAACCCTTAGGTA+TGG + chr2_4:31563049-31563068 None:intergenic 45.0%
TACTGATCCGGATAACCCTT+AGG + chr2_4:31563054-31563073 None:intergenic 45.0%
! CCAGAAAGTGCATACTGATC+CGG + chr2_4:31563066-31563085 None:intergenic 45.0%
!! TCTCAGGAGTACTAGTTCCA+TGG - chr2_4:31563148-31563167 Msa0325150:CDS 45.0%
CTAGTTCCATGGCTGTATGT+TGG - chr2_4:31563159-31563178 Msa0325150:CDS 45.0%
CAGGCTATCGAGAGAGAAAA+AGG + chr2_4:31563302-31563321 None:intergenic 45.0%
GGTACTTCCTCGAACAAATC+AGG + chr2_4:31563573-31563592 None:intergenic 45.0%
! TCTTAAAGATGAGGGAGTGC+CGG - chr2_4:31563761-31563780 Msa0325150:CDS 45.0%
TGCTGAACAGTGCGATATAC+CGG + chr2_4:31563783-31563802 None:intergenic 45.0%
TACCACTCTGGGTTCAATTG+TGG - chr2_4:31563837-31563856 Msa0325150:intron 45.0%
ACCACTCTGGGTTCAATTGT+GGG - chr2_4:31563838-31563857 Msa0325150:intron 45.0%
TGAATGTAGCTCCTGTCGAT+TGG - chr2_4:31563880-31563899 Msa0325150:intron 45.0%
!! CATGAAGAGTTAGCTCTGCA+AGG + chr2_4:31564013-31564032 None:intergenic 45.0%
CTTGCAGAGCTAACTCTTCA+TGG - chr2_4:31564011-31564030 Msa0325150:CDS 45.0%
AGAAGCTACTGTGGGAAAGA+TGG - chr2_4:31564062-31564081 Msa0325150:CDS 45.0%
!! GGTTACCTGTTTTTCCTGAC+AGG - chr2_4:31564211-31564230 Msa0325150:CDS 45.0%
CATCTTTATCCTTGCCTGTC+AGG + chr2_4:31564228-31564247 None:intergenic 45.0%
CTGACAGGCAAGGATAAAGA+TGG - chr2_4:31564226-31564245 Msa0325150:CDS 45.0%
TTTGTTCTGCTCGTGCGAAA+TGG - chr2_4:31564418-31564437 Msa0325150:intron 45.0%
GACAAGGGTCATGAAGAAAC+TGG - chr2_4:31564605-31564624 Msa0325150:intron 45.0%
CATGAAGAAACTGGTTGTGC+GGG - chr2_4:31564614-31564633 Msa0325150:intron 45.0%
ACTTGAGGTGCATCTGCAAA+TGG - chr2_4:31564958-31564977 Msa0325150:CDS 45.0%
CGCGAGTATATCTTTGACAC+AGG - chr2_4:31565039-31565058 Msa0325150:intron 45.0%
CTGTTGTTCATGGAAAGCTG+TGG - chr2_4:31565116-31565135 Msa0325150:intron 45.0%
CGATGAACGGTAAATGACAG+AGG + chr2_4:31565440-31565459 None:intergenic 45.0%
!! ATTGATGCAAGTGTTGGTGC+TGG + chr2_4:31565499-31565518 None:intergenic 45.0%
GTTTCCGTGAAAGTGACACT+TGG + chr2_4:31565654-31565673 None:intergenic 45.0%
TTCCCAACACTTATCTGCTG+AGG + chr2_4:31565676-31565695 None:intergenic 45.0%
CCTGAACAATGGACGGTAAA+GGG + chr2_4:31565812-31565831 None:intergenic 45.0%
ACCTGAACAATGGACGGTAA+AGG + chr2_4:31565813-31565832 None:intergenic 45.0%
ACTGGTATCTTGAGCTTCGA+TGG + chr2_4:31566054-31566073 None:intergenic 45.0%
ATACTCTGCACACTGATGAC+TGG + chr2_4:31566072-31566091 None:intergenic 45.0%
GTCATCAGTGTGCAGAGTAT+TGG - chr2_4:31566072-31566091 Msa0325150:intron 45.0%
AAAGGTTTCCCTACATCTCC+AGG - chr2_4:31566101-31566120 Msa0325150:CDS 45.0%
TGACACTTCCTGGAGATGTA+GGG + chr2_4:31566112-31566131 None:intergenic 45.0%
ATGACACTTCCTGGAGATGT+AGG + chr2_4:31566113-31566132 None:intergenic 45.0%
CAGTTATCGATGACACTTCC+TGG + chr2_4:31566122-31566141 None:intergenic 45.0%
GATCAGGCTATAGGCAACAT+AGG - chr2_4:31566197-31566216 Msa0325150:intron 45.0%
! GGGATCCATCTGAAGCATGT+CGG - chr2_4:31562208-31562227 Msa0325150:intron 50.0%
ATGCCATAAGGTTCGGCTAG+GGG + chr2_4:31562418-31562437 None:intergenic 50.0%
! GATTGTCCCTCCAGCTTGTT+GGG - chr2_4:31562444-31562463 Msa0325150:intron 50.0%
GGTTCCACCTTGCCTTCTTA+AGG - chr2_4:31562465-31562484 Msa0325150:intron 50.0%
CCTTCAATTTCCTCCTCGGA+GGG + chr2_4:31562826-31562845 None:intergenic 50.0%
ACCTTCAATTTCCTCCTCGG+AGG + chr2_4:31562827-31562846 None:intergenic 50.0%
! TATGGAGCGGACTTGGAAAC+TGG - chr2_4:31562991-31563010 Msa0325150:CDS 50.0%
CCGGATCAGTATGCACTTTC+TGG - chr2_4:31563063-31563082 Msa0325150:CDS 50.0%
AATAACTTCCCGCGACTACC+AGG - chr2_4:31563096-31563115 Msa0325150:CDS 50.0%
AGTACAGAACCTGGTAGTCG+CGG + chr2_4:31563108-31563127 None:intergenic 50.0%
CACATGCCAACATACAGCCA+TGG + chr2_4:31563168-31563187 None:intergenic 50.0%
! AAAGCAGAAGCATGGCTTCC+AGG + chr2_4:31563525-31563544 None:intergenic 50.0%
!! GCACTTGCCTGATTTGTTCG+AGG - chr2_4:31563563-31563582 Msa0325150:CDS 50.0%
TATCGCACTGTTCAGCACTC+TGG - chr2_4:31563786-31563805 Msa0325150:CDS 50.0%
ATCGCACTGTTCAGCACTCT+GGG - chr2_4:31563787-31563806 Msa0325150:CDS 50.0%
ACCCACAATTGAACCCAGAG+TGG + chr2_4:31563842-31563861 None:intergenic 50.0%
CCATGCGTTAACCAATCGAC+AGG + chr2_4:31563894-31563913 None:intergenic 50.0%
! CCTGTCGATTGGTTAACGCA+TGG - chr2_4:31563891-31563910 Msa0325150:intron 50.0%
CCTTGCCTGTCAGGAAAAAC+AGG + chr2_4:31564219-31564238 None:intergenic 50.0%
!! CCTGTTTTTCCTGACAGGCA+AGG - chr2_4:31564216-31564235 Msa0325150:CDS 50.0%
! CATGCAAACCTCATTGGCCT+CGG + chr2_4:31564564-31564583 None:intergenic 50.0%
ACAAGAGGTGGATGGAGACA+AGG - chr2_4:31564589-31564608 Msa0325150:intron 50.0%
CAAGAGGTGGATGGAGACAA+GGG - chr2_4:31564590-31564609 Msa0325150:intron 50.0%
TTGGCGCACTAAGGGTTACA+AGG + chr2_4:31564697-31564716 None:intergenic 50.0%
CAAAGATATACTCGCGCTCG+TGG + chr2_4:31565035-31565054 None:intergenic 50.0%
ATCACGGAGCAAAGGAGTCT+CGG - chr2_4:31565723-31565742 Msa0325150:intron 50.0%
CCCTTTACCGTCCATTGTTC+AGG - chr2_4:31565809-31565828 Msa0325150:CDS 50.0%
CAGGCTATAGGCAACATAGG+AGG - chr2_4:31566200-31566219 Msa0325150:intron 50.0%
! CTGACGCACAATGTTCTGAG+TGG - chr2_4:31566309-31566328 Msa0325150:intron 50.0%
ATGGGCCGACATGCTTCAGA+TGG + chr2_4:31562216-31562235 None:intergenic 55.0%
TGCCATAAGGTTCGGCTAGG+GGG + chr2_4:31562417-31562436 None:intergenic 55.0%
GGATTGTCCCTCCAGCTTGT+TGG - chr2_4:31562443-31562462 Msa0325150:intron 55.0%
GTGGAACCCAACAAGCTGGA+GGG + chr2_4:31562453-31562472 None:intergenic 55.0%
CAAGGTGGAACCCAACAAGC+TGG + chr2_4:31562457-31562476 None:intergenic 55.0%
CCCTCCGAGGAGGAAATTGA+AGG - chr2_4:31562823-31562842 Msa0325150:intron 55.0%
GCGGATAGTTGAGCAGCCAA+CGG - chr2_4:31562855-31562874 Msa0325150:intron 55.0%
GCAGCCAACGGATGAAGTTG+AGG - chr2_4:31562867-31562886 Msa0325150:intron 55.0%
! GGTGTACTATGGAGCGGACT+TGG - chr2_4:31562984-31563003 Msa0325150:CDS 55.0%
GTACAGAACCTGGTAGTCGC+GGG + chr2_4:31563107-31563126 None:intergenic 55.0%
TCGCACTGTTCAGCACTCTG+GGG - chr2_4:31563788-31563807 Msa0325150:CDS 55.0%
CTTCGGAATGGTTTCTGCCG+AGG - chr2_4:31564544-31564563 Msa0325150:CDS 55.0%
AAACTGGTTGTGCGGGAACC+AGG - chr2_4:31564621-31564640 Msa0325150:intron 55.0%
AACTGGTTGTGCGGGAACCA+GGG - chr2_4:31564622-31564641 Msa0325150:intron 55.0%
GGTGGAACCCAACAAGCTGG+AGG + chr2_4:31562454-31562473 None:intergenic 60.0%
!! AGGGCTCCCTTCGGTTTTGG+AGG + chr2_4:31562807-31562826 None:intergenic 60.0%
!! TTTCCGAGGGGGTACCACTC+TGG - chr2_4:31563825-31563844 Msa0325150:intron 60.0%
!! TTCCGAGGGGGTACCACTCT+GGG - chr2_4:31563826-31563845 Msa0325150:intron 60.0%
AACCCAGAGTGGTACCCCCT+CGG + chr2_4:31563831-31563850 None:intergenic 60.0%
GGTTTCTGCCGAGGCCAATG+AGG - chr2_4:31564553-31564572 Msa0325150:CDS 60.0%
GTTGTGCGGGAACCAGGGAT+AGG - chr2_4:31564627-31564646 Msa0325150:intron 60.0%
CGCCCCCTAGCCGAACCTTA+TGG - chr2_4:31562412-31562431 Msa0325150:intron 65.0%
! CGGAGGGCTCCCTTCGGTTT+TGG + chr2_4:31562810-31562829 None:intergenic 65.0%
AAACCGAAGGGAGCCCTCCG+AGG - chr2_4:31562810-31562829 Msa0325150:intron 65.0%
CCTCCTCGGAGGGCTCCCTT+CGG + chr2_4:31562816-31562835 None:intergenic 70.0%
CCGAAGGGAGCCCTCCGAGG+AGG - chr2_4:31562813-31562832 Msa0325150:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 31561307 31566734 31561307 ID=Msa0325150;Name=Msa0325150
chr2_4 mRNA 31561307 31566734 31561307 ID=Msa0325150-mRNA-1;Parent=Msa0325150;Name=Msa0325150-mRNA-1;_AED=0.06;_eAED=0.06;_QI=5|1|1|1|1|1|11|355|1003
chr2_4 exon 31561307 31561991 31561307 ID=Msa0325150-mRNA-1:exon:10505;Parent=Msa0325150-mRNA-1
chr2_4 exon 31562211 31562408 31562211 ID=Msa0325150-mRNA-1:exon:10504;Parent=Msa0325150-mRNA-1
chr2_4 exon 31562676 31562779 31562676 ID=Msa0325150-mRNA-1:exon:10503;Parent=Msa0325150-mRNA-1
chr2_4 exon 31562875 31563808 31562875 ID=Msa0325150-mRNA-1:exon:10502;Parent=Msa0325150-mRNA-1
chr2_4 exon 31563935 31564303 31563935 ID=Msa0325150-mRNA-1:exon:10501;Parent=Msa0325150-mRNA-1
chr2_4 exon 31564430 31564591 31564430 ID=Msa0325150-mRNA-1:exon:10500;Parent=Msa0325150-mRNA-1
chr2_4 exon 31564835 31565056 31564835 ID=Msa0325150-mRNA-1:exon:10499;Parent=Msa0325150-mRNA-1
chr2_4 exon 31565153 31565665 31565153 ID=Msa0325150-mRNA-1:exon:10498;Parent=Msa0325150-mRNA-1
chr2_4 exon 31565769 31565846 31565769 ID=Msa0325150-mRNA-1:exon:10497;Parent=Msa0325150-mRNA-1
chr2_4 exon 31566080 31566151 31566080 ID=Msa0325150-mRNA-1:exon:10496;Parent=Msa0325150-mRNA-1
chr2_4 exon 31566700 31566734 31566700 ID=Msa0325150-mRNA-1:exon:10495;Parent=Msa0325150-mRNA-1
chr2_4 five_prime_UTR 31566730 31566734 31566730 ID=Msa0325150-mRNA-1:five_prime_utr;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31566700 31566729 31566700 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31566080 31566151 31566080 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31565769 31565846 31565769 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31565153 31565665 31565153 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31564835 31565056 31564835 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31564430 31564591 31564430 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31563935 31564303 31563935 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31562875 31563808 31562875 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31562676 31562779 31562676 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31562211 31562408 31562211 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 CDS 31561662 31561991 31561662 ID=Msa0325150-mRNA-1:cds;Parent=Msa0325150-mRNA-1
chr2_4 three_prime_UTR 31561307 31561661 31561307 ID=Msa0325150-mRNA-1:three_prime_utr;Parent=Msa0325150-mRNA-1
Gene Sequence

>Msa0325150

ATGAAACAAATGGAATTGGATGCCAAAGAGGATAGTCCTCTTCGGCACAAACTTAAAAAGGACAATGCAGTTGAGTCTCCTGAAAGTCTTAGAAGTAAAAAGATATCAGCTAGATGGGATCCATCTGAAGCATGTCGGCCCATAATTGATGAAGCACCTGTTTTTCATCCAACTATTGAAGAGTTTGAAGATACACTGAGTTACATAGCGAAGATACGCCCCCTAGCCGAACCTTATGGCATATGTAGGATTGTCCCTCCAGCTTGTTGGGTTCCACCTTGCCTTCTTAAGGAGAAAGATATTTGGGAAAATGCCGAATTTTCCACCCGTATTCAGCAAATTGATTTACTTCAAAATAGAGAACCTATGAAGAAAAAAAGTAGGGGAAGGAAGAGAAAACGTAGAAGGAACTCCAAATCAGGAACATGTAGGAGAAATTCCAAGTCAGCTTCTGAAGCTAATAACGCTTCTGAAGCTGATGAGAAATACGGATTTCAAGCAGGGTCCGACTTCACGTTTAAAGACTTTCAGCAATATGCTAGCCACTTTAAGGAATGCTACTTTGGGTTGAAAGATGCAAATGAAGATGGAAAAGTCAATGATAGTAACCTCCAAAACCGAAGGGAGCCCTCCGAGGAGGAAATTGAAGGTGAATACTGGCGGATAGTTGAGCAGCCAACGGATGAAGTTGAGGTGTACTATGGAGCGGACTTGGAAACTGGAGTATTTGGAAGTGGTTTTTCTAAGGCATCATCCATACCTAAGGGTTATCCGGATCAGTATGCACTTTCTGGTTGGAATCTAAATAACTTCCCGCGACTACCAGGTTCTGTACTAAGTTTTGAAGGAAGTGACATCTCAGGAGTACTAGTTCCATGGCTGTATGTTGGCATGTGCTTTTCATCGTTTTGTTGGCATGTTGAGGATCATCACCTGTATTCGCTTAATTATCTACACTTTGGTGATTCAAAGATATGGTATGGAGTACCTGGAAGCCATGCTTCTGCTTTAGAAGATGCAATGAAGAAGCACTTGCCTGATTTGTTCGAGGAAGTACCAAATCTACTCAATGATCTGGTTACTCAGTTATCTCCATCAATTCTTAAAGATGAGGGAGTGCCGGTATATCGCACTGTTCAGCACTCTGGGGAATTTGTCATTACTTTTCCGAGGGGGTACCACTCTGGGTTCAATTGTGGGTTCAACTGTGCAGAAGCAGTGAATGTAGCTCCTGTCGATTGGTTAACGCATGGCCTAAATGCCGTTGAACTTTACAGTTTACAACGCCGTAAGACATCATTGTCACATGACAAGCTTTTATTTGGATCATCGCTGGAAGCTATACGAGCCCTTGCAGAGCTAACTCTTCATGGAAAGGAAAGTTCAAAAAATTTGAAATGGAGAAGCTACTGTGGGAAAGATGGAGTTCTTACTAAGGCATTTAAGGCAAGGATAAAGATGGAAGAAGAGAGGCTAAACTGTCTTCCAACTCATTTTAAGTCGCTGAAGATGGGCAACGACTTTGACTTGCATACAGAACGAGAATGCTTTTCTTGCTTCTATGACTTATATCTATCTGCTGTCGGTTGCAAGTGCTCTCCTGATAAATATTCCTGTCTTAAGCATGCTAGTTTGTTCTGCTCGTGCGAAATGGACAAAAGATTTGTTCTGCTTCGGTATAATACGAATGAGCTAAACAAATTGCTTGAAGCACTAGAAGGGGATTCACTTGCTCTTGAGTTATGGGAAAGTAAAAACTTCGGAATGGTTTCTGCCGAGGCCAATGAGGTTTGCATGAATAAACAAGAGGTGGATGGAGACAAGGGTCATGAAGAAACTGGTTGTGCGGGAACCAGGGATAGGTCAAATAGTCATGCTACATCAGAGCTAATGCAGTGCGAATCTCACCTTGTAACCCTTAGTGCGCCAAATGAAAGTATAGATAGTGATAATGACAATATGATAGTCATAGACAAAGATAAGGCGGATATTGCAGATAGCCATAACAAGGGTGATTCAGTAGAGGAAAAAGCATGTTGTTCAGAGATAAAAAAGGAACAAGACAACATGGAACTTGTTGTTGACCTATCACCTTCATCTTCTGTTGTGAAGACAGAAGTTTCATCATGCTCTAGGAATGTTCACAATTCTTGTACATTTGATGGTGGAAAACTTGAGGTGCATCTGCAAATGGATTCAGATTCAAGAAAGAAACCCAAAATTGTAGTTGAAAAAGTCATTGACACCACGAGCGCGAGTATATCTTTGACACAGGAAAGCTTTCTAATGCAAATTTTGAGTACTTCTGTCAAGCCTATAAGTTTGGGATCTGTTGTTCATGGAAAGCTGTGGTGCAATAAGCATGCAATATATCCAAAAGGATTCAAGAGCCGAGTTAATTTCTTTAGTATCATCAATCCAACAAGAATCTGTAGCTATGTTTCTGAAGTAATTGATGCTGGACTTCTAGGACCACTTTTCAAGGTTACAATGGAAGAATGTCCAAGTGTCACTTTCACGGAAACCTCAGCAGATAAGTGTTGGGAATCAGTTCTTAAGAGACTAAATGACAAAATCACGGAGCAAAGGAGTCTCGGTGAACTTGAACTTCCTTCCTTAGAGCTTCTGAAAAGCATTAAGGGTTTTAGAATGTTCGGCTTCCCTTTACCGTCCATTGTTCAGGCCATCGAAGCTCAAGATACCAGTCATCAGTGTGCAGAGTATTGGAATCACAAAGGTTTCCCTACATCTCCAGGAAGTGTCATCGATAACTGTAAAGTCCTATGTTGTTCAAGTAGCCCTACCAAAGTTTTTGGTATTAATTTGACTGATCAGGCTATAGGCAACATAGGAGGAAGTTATTATTCTCTTGAAGAGATGAAATCAATACTACGAAAGGCAAGTCTCGAAGAGCTAAGCTCATTGCGCAAGTTTCTCATCTCTGACGCACAATGTTCTGAGTGGAGAATGACATTAACATCATTGATCGATGAGATTCAGAAAGCTTTGTAG
Protein sequence

>Msa0325150

MKQMELDAKEDSPLRHKLKKDNAVESPESLRSKKISARWDPSEACRPIIDEAPVFHPTIEEFEDTLSYIAKIRPLAEPYGICRIVPPACWVPPCLLKEKDIWENAEFSTRIQQIDLLQNREPMKKKSRGRKRKRRRNSKSGTCRRNSKSASEANNASEADEKYGFQAGSDFTFKDFQQYASHFKECYFGLKDANEDGKVNDSNLQNRREPSEEEIEGEYWRIVEQPTDEVEVYYGADLETGVFGSGFSKASSIPKGYPDQYALSGWNLNNFPRLPGSVLSFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHFGDSKIWYGVPGSHASALEDAMKKHLPDLFEEVPNLLNDLVTQLSPSILKDEGVPVYRTVQHSGEFVITFPRGYHSGFNCGFNCAEAVNVAPVDWLTHGLNAVELYSLQRRKTSLSHDKLLFGSSLEAIRALAELTLHGKESSKNLKWRSYCGKDGVLTKAFKARIKMEEERLNCLPTHFKSLKMGNDFDLHTERECFSCFYDLYLSAVGCKCSPDKYSCLKHASLFCSCEMDKRFVLLRYNTNELNKLLEALEGDSLALELWESKNFGMVSAEANEVCMNKQEVDGDKGHEETGCAGTRDRSNSHATSELMQCESHLVTLSAPNESIDSDNDNMIVIDKDKADIADSHNKGDSVEEKACCSEIKKEQDNMELVVDLSPSSSVVKTEVSSCSRNVHNSCTFDGGKLEVHLQMDSDSRKKPKIVVEKVIDTTSASISLTQESFLMQILSTSVKPISLGSVVHGKLWCNKHAIYPKGFKSRVNFFSIINPTRICSYVSEVIDAGLLGPLFKVTMEECPSVTFTETSADKCWESVLKRLNDKITEQRSLGELELPSLELLKSIKGFRMFGFPLPSIVQAIEAQDTSHQCAEYWNHKGFPTSPGSVIDNCKVLCCSSSPTKVFGINLTDQAIGNIGGSYYSLEEMKSILRKASLEELSSLRKFLISDAQCSEWRMTLTSLIDEIQKAL*