Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337380 | XP_039687055.1 | 90.045 | 221 | 20 | 2 | 1 | 221 | 1 | 219 | 4.25e-138 | 395 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337380 | sp|F4JIJ7|BH162_ARATH | 39.665 | 179 | 98 | 5 | 13 | 184 | 11 | 186 | 8.15e-28 | 107 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0337380 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337380 | MtrunA17_Chr2g0324511 | 87.195 | 164 | 20 | 1 | 1 | 164 | 1 | 163 | 5.84e-98 | 282 |
| Msa0337380 | MtrunA17_Chr4g0040201 | 62.687 | 201 | 66 | 4 | 9 | 206 | 8 | 202 | 1.41e-81 | 242 |
| Msa0337380 | MtrunA17_Chr2g0324571 | 87.395 | 119 | 13 | 2 | 46 | 164 | 2 | 118 | 4.75e-67 | 202 |
| Msa0337380 | MtrunA17_Chr2g0324521 | 85.833 | 120 | 11 | 2 | 46 | 164 | 2 | 116 | 4.95e-64 | 194 |
| Msa0337380 | MtrunA17_Chr2g0324531 | 76.271 | 59 | 14 | 0 | 163 | 221 | 2 | 60 | 1.43e-26 | 97.1 |
| Msa0337380 | MtrunA17_Chr2g0282341 | 35.252 | 139 | 80 | 3 | 49 | 185 | 4 | 134 | 4.47e-24 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0337380 | AT4G20970.1 | 39.665 | 179 | 98 | 5 | 13 | 184 | 11 | 186 | 8.28e-29 | 107 |
| Msa0337380 | AT1G10585.1 | 28.962 | 183 | 116 | 5 | 7 | 188 | 8 | 177 | 2.81e-14 | 68.9 |
Find 51 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATTCTGGGATCTTGAAAT+TGG | 0.214902 | 2_4:+57382350 | Msa0337380:CDS |
| TTTCAATCTCTCGCCTATTT+TGG | 0.215651 | 2_4:-57382285 | None:intergenic |
| TATCTCTTCAAATTCTTCTT+TGG | 0.234992 | 2_4:+57378447 | Msa0337380:CDS |
| GGAGAAGAAAGAAAGTTTAA+TGG | 0.269701 | 2_4:+57378237 | Msa0337380:CDS |
| CCACAATCTTTGTTACGATT+TGG | 0.281934 | 2_4:+57382257 | Msa0337380:CDS |
| ATGTAGCATATATATGTATC+AGG | 0.284203 | 2_4:+57382430 | Msa0337380:exon |
| TGGAAACACAGCCTCAATTC+TGG | 0.290627 | 2_4:+57382336 | Msa0337380:CDS |
| GAGAGTTGAGTTTAGAAAAG+AGG | 0.353043 | 2_4:-57377186 | None:intergenic |
| TGATTTCACAGAAAATAAAA+TGG | 0.357173 | 2_4:-57378393 | None:intergenic |
| GAGAAGAAAGAAAGTTTAAT+GGG | 0.362015 | 2_4:+57378238 | Msa0337380:CDS |
| CGATTTGGAGAAACCAAAAT+AGG | 0.365801 | 2_4:+57382272 | Msa0337380:CDS |
| AACAATCTTTCTTTCGACTT+TGG | 0.375002 | 2_4:-57377134 | None:intergenic |
| TATATGCTACATCAAGGATT+TGG | 0.385828 | 2_4:-57382419 | None:intergenic |
| TAGAAAAGAGGATCTTCATT+TGG | 0.386590 | 2_4:-57377174 | None:intergenic |
| TTGAAATTGGAAGTGAGAGT+TGG | 0.404544 | 2_4:+57382363 | Msa0337380:CDS |
| TCTTCAAATTCTTCTTTGGC+TGG | 0.418592 | 2_4:+57378451 | Msa0337380:CDS |
| CGAGAGATTGAAAGCATTTG+TGG | 0.420058 | 2_4:+57382295 | Msa0337380:CDS |
| ATAGCCTCATCTACTTGATC+AGG | 0.429867 | 2_4:-57378172 | None:intergenic |
| TCTTCATACTGTGCTTGCTC+AGG | 0.440180 | 2_4:+57378483 | Msa0337380:CDS |
| AAAATAGAGATTCATGAAAT+GGG | 0.456591 | 2_4:+57378331 | Msa0337380:CDS |
| TCAAGGATTTGGTAAACTCT+TGG | 0.461110 | 2_4:-57382408 | None:intergenic |
| TCGACTTTGGTTGAAGAAGA+AGG | 0.461998 | 2_4:-57377121 | None:intergenic |
| TGAAATTGGAAGTGAGAGTT+GGG | 0.469657 | 2_4:+57382364 | Msa0337380:CDS |
| GGAAACACAGCCTCAATTCT+GGG | 0.475798 | 2_4:+57382337 | Msa0337380:CDS |
| TCAAGTTCTTATGTAGCAAA+AGG | 0.476809 | 2_4:+57378289 | Msa0337380:CDS |
| ATCACCTTTGGATTATAGCT+AGG | 0.496982 | 2_4:-57377214 | None:intergenic |
| ATAGTAACATGTGGGGTTGA+TGG | 0.504743 | 2_4:+57378370 | Msa0337380:CDS |
| GCTAGAGACAAATCTAAAGT+TGG | 0.505158 | 2_4:+57378210 | Msa0337380:CDS |
| AGGCTATAAACTACATAAAG+AGG | 0.505657 | 2_4:+57378188 | Msa0337380:CDS |
| TCACCTTTGGATTATAGCTA+GGG | 0.515824 | 2_4:-57377213 | None:intergenic |
| TCATCTACTTGATCAGGTAA+TGG | 0.522136 | 2_4:-57378166 | None:intergenic |
| CCAAATCGTAACAAAGATTG+TGG | 0.525530 | 2_4:-57382257 | None:intergenic |
| ATTTCAAGATCCCAGAATTG+AGG | 0.533997 | 2_4:-57382347 | None:intergenic |
| TACATATATATGCTACATCA+AGG | 0.563652 | 2_4:-57382425 | None:intergenic |
| CTGTGTTTCCACATCGCTCA+CGG | 0.565280 | 2_4:-57382324 | None:intergenic |
| GACAAATCTAAAGTTGGCAA+AGG | 0.566702 | 2_4:+57378216 | Msa0337380:CDS |
| TACAAGTGATAGTAACATGT+GGG | 0.572565 | 2_4:+57378362 | Msa0337380:CDS |
| AGATTGAAAGCATTTGTGGA+AGG | 0.584279 | 2_4:+57382299 | Msa0337380:CDS |
| GCACAGTATGAAGAAGTGAA+TGG | 0.602985 | 2_4:-57378474 | None:intergenic |
| TGTTACTATCACTTGTAGAG+TGG | 0.621994 | 2_4:-57378356 | None:intergenic |
| TCTCCCTAGCTATAATCCAA+AGG | 0.625430 | 2_4:+57377210 | Msa0337380:CDS |
| TGTAGCATATATATGTATCA+GGG | 0.625562 | 2_4:+57382431 | Msa0337380:three_prime_UTR |
| ATTACCTGATCAAGTAGATG+AGG | 0.636526 | 2_4:+57378168 | Msa0337380:CDS |
| AAGAAGAGATCACGTAGTGG+TGG | 0.646143 | 2_4:+57378262 | Msa0337380:CDS |
| CTACAAGTGATAGTAACATG+TGG | 0.646380 | 2_4:+57378361 | Msa0337380:CDS |
| GGAAGGATCCGTGAGCGATG+TGG | 0.680798 | 2_4:+57382316 | Msa0337380:CDS |
| TCAATGGATCATAATCAACA+AGG | 0.691327 | 2_4:+57377091 | None:intergenic |
| ACAAGTGATAGTAACATGTG+GGG | 0.710951 | 2_4:+57378363 | Msa0337380:CDS |
| ATGGATCATAATCAACAAGG+AGG | 0.711780 | 2_4:+57377094 | Msa0337380:CDS |
| ACTGCATGAAGAGAACGTTG+AGG | 0.725880 | 2_4:+57378423 | Msa0337380:CDS |
| GGAAAGAAGAGATCACGTAG+TGG | 0.744325 | 2_4:+57378259 | Msa0337380:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+GGG | - | chr2_4:57381387-57381406 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | - | chr2_4:57381388-57381407 | None:intergenic | 0.0% |
| !! | TGTTTATAATATAAAAACAT+GGG | - | chr2_4:57378850-57378869 | None:intergenic | 10.0% |
| !! | TTGTTTATAATATAAAAACA+TGG | - | chr2_4:57378851-57378870 | None:intergenic | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | + | chr2_4:57379405-57379424 | Msa0337380:intron | 10.0% |
| !!! | CAATTTTTTTTTATAGTTTT+TGG | + | chr2_4:57379701-57379720 | Msa0337380:intron | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | + | chr2_4:57379762-57379781 | Msa0337380:intron | 10.0% |
| !! | TTTATAGAATTAAAAAATTC+TGG | + | chr2_4:57379841-57379860 | Msa0337380:intron | 10.0% |
| !! | AAAAATTAATAAAGAAATTC+TGG | + | chr2_4:57379959-57379978 | Msa0337380:intron | 10.0% |
| !! | GAAAAAATATTAAAAAATTC+TGG | + | chr2_4:57380008-57380027 | Msa0337380:intron | 10.0% |
| !! | AATGAAAAAATTTGAAAAAA+CGG | + | chr2_4:57380051-57380070 | Msa0337380:intron | 10.0% |
| !!! | TTTAAAATTTAATGAAATTC+TGG | - | chr2_4:57380602-57380621 | None:intergenic | 10.0% |
| !! | AATTGAACAAAAAAAAACAT+GGG | - | chr2_4:57377394-57377413 | None:intergenic | 15.0% |
| !! | TAATTGAACAAAAAAAAACA+TGG | - | chr2_4:57377395-57377414 | None:intergenic | 15.0% |
| !!! | TGACTTTTTTTTAATCTTTA+CGG | + | chr2_4:57377918-57377937 | Msa0337380:intron | 15.0% |
| !!! | ATTAAAAGCTTATTTTTACA+TGG | + | chr2_4:57377996-57378015 | Msa0337380:intron | 15.0% |
| !!! | TTAAAAGCTTATTTTTACAT+GGG | + | chr2_4:57377997-57378016 | Msa0337380:intron | 15.0% |
| !! | TCTTATTACACATATTAATT+TGG | + | chr2_4:57378109-57378128 | Msa0337380:intron | 15.0% |
| !! | AGGTATATATATATATATGT+GGG | + | chr2_4:57378503-57378522 | Msa0337380:intron | 15.0% |
| !! | TGTTTATAATAGAAAAACAT+GGG | - | chr2_4:57378604-57378623 | None:intergenic | 15.0% |
| !! | TTGTTTATAATAGAAAAACA+TGG | - | chr2_4:57378605-57378624 | None:intergenic | 15.0% |
| !! | ATTAACCCTATATATATATA+GGG | - | chr2_4:57379017-57379036 | None:intergenic | 15.0% |
| !! | AATTAACCCTATATATATAT+AGG | - | chr2_4:57379018-57379037 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr2_4:57379498-57379517 | None:intergenic | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | - | chr2_4:57379155-57379174 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | - | chr2_4:57379239-57379258 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | - | chr2_4:57379274-57379293 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | + | chr2_4:57379433-57379452 | Msa0337380:intron | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | + | chr2_4:57379434-57379453 | Msa0337380:intron | 15.0% |
| !!! | AAGTAAATTTTTTTTCTTCT+AGG | + | chr2_4:57379468-57379487 | Msa0337380:intron | 15.0% |
| !!! | AGTAAATTTTTTTTCTTCTA+GGG | + | chr2_4:57379469-57379488 | Msa0337380:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr2_4:57379498-57379517 | Msa0337380:intron | 15.0% |
| !! | AATTAACCCATATATATATA+TGG | + | chr2_4:57379563-57379582 | Msa0337380:intron | 15.0% |
| !!! | TTTTAGCCATATATATATAT+GGG | - | chr2_4:57379572-57379591 | None:intergenic | 15.0% |
| !!! | ATTTTAGCCATATATATATA+TGG | - | chr2_4:57379573-57379592 | None:intergenic | 15.0% |
| !! | ATATATATATGGCTAAAATA+TGG | + | chr2_4:57379574-57379593 | Msa0337380:intron | 15.0% |
| !!! | CAAAAAAAATTTATAGCTTT+TGG | + | chr2_4:57379640-57379659 | Msa0337380:intron | 15.0% |
| !! | AACTATAAAAAAAAATTGCA+GGG | - | chr2_4:57379699-57379718 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAAATTGC+AGG | - | chr2_4:57379700-57379719 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | - | chr2_4:57379760-57379779 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | - | chr2_4:57379761-57379780 | None:intergenic | 15.0% |
| !! | AAAATTATAAAAGATTTGCA+GGG | - | chr2_4:57380888-57380907 | None:intergenic | 15.0% |
| !! | AAAAATTATAAAAGATTTGC+AGG | - | chr2_4:57380887-57380906 | None:intergenic | 15.0% |
| !!! | ATTTTTGTGTATTTATAAAG+CGG | - | chr2_4:57380334-57380353 | None:intergenic | 15.0% |
| !!! | ATTTTCATTAGTATTTTTTC+CGG | - | chr2_4:57380359-57380378 | None:intergenic | 15.0% |
| !!! | CATATTTTTTCTTTTATTCT+CGG | + | chr2_4:57380430-57380449 | Msa0337380:intron | 15.0% |
| !!! | TCCAGAATTTTAATTTTTTT+TGG | + | chr2_4:57380641-57380660 | Msa0337380:intron | 15.0% |
| !! | TCCAAAAAAAATTAAAATTC+TGG | - | chr2_4:57380645-57380664 | None:intergenic | 15.0% |
| !! | AAAAATTATAAAAGATTTGC+AGG | + | chr2_4:57380887-57380906 | Msa0337380:intron | 15.0% |
| !! | AAAATTATAAAAGATTTGCA+GGG | + | chr2_4:57380888-57380907 | Msa0337380:intron | 15.0% |
| !!! | CAAAATTTTTTTATAGCTTT+TGG | - | chr2_4:57381007-57381026 | None:intergenic | 15.0% |
| !! | TATATATATAGGCTAAAATA+TGG | - | chr2_4:57381073-57381092 | None:intergenic | 15.0% |
| !! | AAGGAAATTATTACTATAAA+AGG | + | chr2_4:57381685-57381704 | Msa0337380:intron | 15.0% |
| !! | ATGACACATAATAAAAAAAA+GGG | - | chr2_4:57381824-57381843 | None:intergenic | 15.0% |
| !! | AATGACACATAATAAAAAAA+AGG | - | chr2_4:57381825-57381844 | None:intergenic | 15.0% |
| !! | AAATGTTATATCATGATTTA+TGG | - | chr2_4:57381899-57381918 | None:intergenic | 15.0% |
| !!! | AATATATATATATGCACTTT+TGG | - | chr2_4:57382129-57382148 | None:intergenic | 15.0% |
| !! | ATATATGTATATGAATGTGA+TGG | - | chr2_4:57377251-57377270 | None:intergenic | 20.0% |
| !! | GGTAAATTAAAGAAGAAAAA+AGG | - | chr2_4:57377442-57377461 | None:intergenic | 20.0% |
| !! | TAAAGAGAATTTAGTTGAAT+TGG | - | chr2_4:57377580-57377599 | None:intergenic | 20.0% |
| !! | ACTAAATTCTCTTTAACATT+TGG | + | chr2_4:57377585-57377604 | Msa0337380:intron | 20.0% |
| !! | TTAATATGTGTAATAAGAAG+AGG | - | chr2_4:57378107-57378126 | None:intergenic | 20.0% |
| !!! | ATTTCATGAATCTCTATTTT+TGG | - | chr2_4:57378331-57378350 | None:intergenic | 20.0% |
| !! | AAAAATAGAGATTCATGAAA+TGG | + | chr2_4:57378330-57378349 | Msa0337380:CDS | 20.0% |
| !! | AAAATAGAGATTCATGAAAT+GGG | + | chr2_4:57378331-57378350 | Msa0337380:CDS | 20.0% |
| !! | TGATTTCACAGAAAATAAAA+TGG | - | chr2_4:57378396-57378415 | None:intergenic | 20.0% |
| !! | CAGGTATATATATATATATG+TGG | + | chr2_4:57378502-57378521 | Msa0337380:intron | 20.0% |
| !!! | TGTTTTGGTAAATAACTAAT+AGG | - | chr2_4:57378581-57378600 | None:intergenic | 20.0% |
| !! | TAAAGTTTAATAGAGACAAA+AGG | + | chr2_4:57378667-57378686 | Msa0337380:intron | 20.0% |
| !! | AAAGTTTAATAGAGACAAAA+GGG | + | chr2_4:57378668-57378687 | Msa0337380:intron | 20.0% |
| !! | TAAAGTTTAATAGAGACAAA+AGG | + | chr2_4:57378667-57378686 | Msa0337380:intron | 20.0% |
| !! | AAAGTTTAATAGAGACAAAA+GGG | + | chr2_4:57378668-57378687 | Msa0337380:intron | 20.0% |
| !! | TTAACCCTATATATATATAG+GGG | - | chr2_4:57379016-57379035 | None:intergenic | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | + | chr2_4:57379185-57379204 | Msa0337380:intron | 20.0% |
| !!! | ATATGGGTTAATTATGTTTT+TGG | - | chr2_4:57379556-57379575 | None:intergenic | 20.0% |
| !!! | AGCTATAAATTTTTTTTGCA+GGG | - | chr2_4:57379638-57379657 | None:intergenic | 20.0% |
| !!! | AAGCTATAAATTTTTTTTGC+AGG | - | chr2_4:57379639-57379658 | None:intergenic | 20.0% |
| !! | CGGAAAAAATAAAAAAAATC+TGG | + | chr2_4:57380071-57380090 | Msa0337380:intron | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | - | chr2_4:57380300-57380319 | None:intergenic | 20.0% |
| !!! | TTTTTGTGTATTTATAAAGC+GGG | - | chr2_4:57380333-57380352 | None:intergenic | 20.0% |
| !! | TATAAATACACAAAAATTCC+CGG | + | chr2_4:57380337-57380356 | Msa0337380:intron | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+GGG | - | chr2_4:57380358-57380377 | None:intergenic | 20.0% |
| !! | TATAAATACACAAAAATTCC+TGG | + | chr2_4:57380337-57380356 | Msa0337380:intron | 20.0% |
| !! | CGAAAATAAAAATGAAATTC+TGG | - | chr2_4:57380549-57380568 | None:intergenic | 20.0% |
| !! | CGGAAAAAATTTAAAAAATC+TGG | - | chr2_4:57380721-57380740 | None:intergenic | 20.0% |
| !! | TCTGGAAAATTGAAAAAAAA+CGG | - | chr2_4:57380741-57380760 | None:intergenic | 20.0% |
| !!! | GCAAAATTTTTTATAGCTTT+TGG | - | chr2_4:57380947-57380966 | None:intergenic | 20.0% |
| !!! | AAAGCTATAAAAAATTTTGC+AGG | + | chr2_4:57380947-57380966 | Msa0337380:intron | 20.0% |
| !!! | AAGCTATAAAAAATTTTGCA+GGG | + | chr2_4:57380948-57380967 | Msa0337380:intron | 20.0% |
| !!! | AAGCTATAAAAAAATTTTGC+AGG | + | chr2_4:57381008-57381027 | Msa0337380:intron | 20.0% |
| !!! | AGCTATAAAAAAATTTTGCA+GGG | + | chr2_4:57381009-57381028 | Msa0337380:intron | 20.0% |
| !!! | TTCTTTTTTTTGAAGAAAAG+TGG | + | chr2_4:57381602-57381621 | Msa0337380:intron | 20.0% |
| !!! | AAAAGTGGCTTATTTTTTTA+TGG | + | chr2_4:57381617-57381636 | Msa0337380:intron | 20.0% |
| !!! | AAAGTGGCTTATTTTTTTAT+GGG | + | chr2_4:57381618-57381637 | Msa0337380:intron | 20.0% |
| !! | TAAATTTAATAGTGTGACAT+TGG | + | chr2_4:57381864-57381883 | Msa0337380:intron | 20.0% |
| !! | ATTTGATCAATAAAATCGAA+AGG | - | chr2_4:57381927-57381946 | None:intergenic | 20.0% |
| !! | CATATATGTATTTTCATGTG+AGG | + | chr2_4:57377264-57377283 | Msa0337380:intron | 25.0% |
| !! | TGTTAAAACATTTTACACCT+AGG | + | chr2_4:57377347-57377366 | Msa0337380:intron | 25.0% |
| ! | AGAAAAAAGGAGAAGAAAAA+AGG | - | chr2_4:57377429-57377448 | None:intergenic | 25.0% |
| !!! | TTTTCTTCTTTAATTTACCC+TGG | + | chr2_4:57377443-57377462 | Msa0337380:intron | 25.0% |
| ! | TAAAGAAAAACATGAATCCA+GGG | - | chr2_4:57377463-57377482 | None:intergenic | 25.0% |
| ! | TTAAAGAAAAACATGAATCC+AGG | - | chr2_4:57377464-57377483 | None:intergenic | 25.0% |
| !!! | AGAGCACTTCTTATAATTTT+TGG | + | chr2_4:57377662-57377681 | Msa0337380:intron | 25.0% |
| ! | TGTACAAAGTCAAAAAGAAA+AGG | - | chr2_4:57377795-57377814 | None:intergenic | 25.0% |
| ! | TAACTAATACAGAAAAGATC+TGG | - | chr2_4:57377892-57377911 | None:intergenic | 25.0% |
| ! | TGTTATGTTTCATTTAATGC+AGG | + | chr2_4:57378132-57378151 | Msa0337380:intron | 25.0% |
| ! | GAGAAGAAAGAAAGTTTAAT+GGG | + | chr2_4:57378238-57378257 | Msa0337380:CDS | 25.0% |
| ! | TATCTCTTCAAATTCTTCTT+TGG | + | chr2_4:57378447-57378466 | Msa0337380:CDS | 25.0% |
| !!! | TGTTTTAGTAAAGTACAAGT+AGG | + | chr2_4:57378691-57378710 | Msa0337380:intron | 25.0% |
| !!! | TGTTTTGGTAAATTACTAGT+AGG | - | chr2_4:57378827-57378846 | None:intergenic | 25.0% |
| !! | ATATAAAAACATGGGTGTTT+TGG | - | chr2_4:57378842-57378861 | None:intergenic | 25.0% |
| !!! | TGTTTTAGTAAAGTACAAGT+AGG | + | chr2_4:57378691-57378710 | Msa0337380:intron | 25.0% |
| ! | TAACCCTATATATATATAGG+GGG | - | chr2_4:57379015-57379034 | None:intergenic | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | - | chr2_4:57379144-57379163 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | + | chr2_4:57379209-57379228 | Msa0337380:intron | 25.0% |
| !! | ATATGGCTAAAATATGGTTT+TGG | + | chr2_4:57379580-57379599 | Msa0337380:intron | 25.0% |
| !!! | TGTATTTTTTCCCTTATTCT+CGG | + | chr2_4:57380287-57380306 | Msa0337380:intron | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | - | chr2_4:57380301-57380320 | None:intergenic | 25.0% |
| ! | ATACATAAAAAACCTAAGCT+CGG | + | chr2_4:57380395-57380414 | Msa0337380:intron | 25.0% |
| !! | GTATTTCTCAAAAATTTTCC+AGG | - | chr2_4:57380476-57380495 | None:intergenic | 25.0% |
| !! | TATAGGCTAAAATATGGTTT+TGG | - | chr2_4:57381067-57381086 | None:intergenic | 25.0% |
| ! | ACACCTTAATAAAATCTAGT+GGG | - | chr2_4:57381118-57381137 | None:intergenic | 25.0% |
| ! | AAGTTGTTAAATACACCTTA+AGG | + | chr2_4:57381161-57381180 | Msa0337380:intron | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | - | chr2_4:57381265-57381284 | None:intergenic | 25.0% |
| ! | AAGTAGTTAAATACACCTTA+AGG | + | chr2_4:57381307-57381326 | Msa0337380:intron | 25.0% |
| ! | CTAGTTAAGCATATCATAAA+AGG | + | chr2_4:57381666-57381685 | Msa0337380:intron | 25.0% |
| ! | AAAAAAAGGGAAATTCTAAC+TGG | - | chr2_4:57381811-57381830 | None:intergenic | 25.0% |
| ! | ATATGTGACATTGTTCATTT+GGG | - | chr2_4:57381984-57382003 | None:intergenic | 25.0% |
| !! | GGAGATTATTTTCAATAACA+TGG | - | chr2_4:57382009-57382028 | None:intergenic | 25.0% |
| ! | AATAATCCCGAAACTAAAAA+TGG | + | chr2_4:57382048-57382067 | Msa0337380:intron | 25.0% |
| !!! | TTAGTTCCATTTTTAGTTTC+GGG | - | chr2_4:57382057-57382076 | None:intergenic | 25.0% |
| !!! | CTTAGTTCCATTTTTAGTTT+CGG | - | chr2_4:57382058-57382077 | None:intergenic | 25.0% |
| !! | GTCTTAACAATATTTTGTGA+AGG | + | chr2_4:57382154-57382173 | Msa0337380:intron | 25.0% |
| ! | TACATATATATGCTACATCA+AGG | - | chr2_4:57382428-57382447 | None:intergenic | 25.0% |
| AACAATCTTTCTTTCGACTT+TGG | - | chr2_4:57377137-57377156 | None:intergenic | 30.0% | |
| TAGAAAAGAGGATCTTCATT+TGG | - | chr2_4:57377177-57377196 | None:intergenic | 30.0% | |
| GAAATTAAACAGATCACCTT+TGG | - | chr2_4:57377229-57377248 | None:intergenic | 30.0% | |
| AAAGAGTTATGCAATGAATG+TGG | - | chr2_4:57377297-57377316 | None:intergenic | 30.0% | |
| ! | TGCATAACTCTTTGTTGTAT+TGG | + | chr2_4:57377304-57377323 | Msa0337380:intron | 30.0% |
| ! | ACATTTTACACCTAGGTTTT+CGG | + | chr2_4:57377354-57377373 | Msa0337380:intron | 30.0% |
| CAAAAAAAAACATGGGTTCA+TGG | - | chr2_4:57377387-57377406 | None:intergenic | 30.0% | |
| AGGCTATAAACTACATAAAG+AGG | + | chr2_4:57378188-57378207 | Msa0337380:CDS | 30.0% | |
| GGAGAAGAAAGAAAGTTTAA+TGG | + | chr2_4:57378237-57378256 | Msa0337380:CDS | 30.0% | |
| TCAAGTTCTTATGTAGCAAA+AGG | + | chr2_4:57378289-57378308 | Msa0337380:CDS | 30.0% | |
| TACAAGTGATAGTAACATGT+GGG | + | chr2_4:57378362-57378381 | Msa0337380:CDS | 30.0% | |
| ! | ATAGAAAAACATGGGTGTTT+TGG | - | chr2_4:57378596-57378615 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | - | chr2_4:57379513-57379532 | None:intergenic | 30.0% | |
| !!! | GAGTGCAGAAATTTTTTGTA+GGG | - | chr2_4:57379112-57379131 | None:intergenic | 30.0% |
| !!! | TGAGTGCAGAAATTTTTTGT+AGG | - | chr2_4:57379113-57379132 | None:intergenic | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | - | chr2_4:57379236-57379255 | None:intergenic | 30.0% |
| AAGTAAGGACTAAACTTACA+AGG | + | chr2_4:57379513-57379532 | Msa0337380:intron | 30.0% | |
| !! | AAAACTGGCATATTTTTGCA+GGG | - | chr2_4:57379789-57379808 | None:intergenic | 30.0% |
| ATGTCGAAATTTCGAAATTC+TGG | + | chr2_4:57380198-57380217 | Msa0337380:intron | 30.0% | |
| TTAGTATATATGTCGAGCTT+AGG | + | chr2_4:57380255-57380274 | Msa0337380:intron | 30.0% | |
| TGTATTTATAAACCGAGCTT+AGG | - | chr2_4:57380410-57380429 | None:intergenic | 30.0% | |
| ! | ACACCCACTAGATTTTATTA+AGG | + | chr2_4:57381112-57381131 | Msa0337380:intron | 30.0% |
| CACACCTTAATAAAATCTAG+TGG | - | chr2_4:57381119-57381138 | None:intergenic | 30.0% | |
| ! | TTTTAGCAACATTCACCTTA+AGG | - | chr2_4:57381179-57381198 | None:intergenic | 30.0% |
| ! | GCACCTTCTAAAAAATAAGT+GGG | + | chr2_4:57381200-57381219 | Msa0337380:intron | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | - | chr2_4:57381259-57381278 | None:intergenic | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | + | chr2_4:57381259-57381278 | Msa0337380:intron | 30.0% |
| ! | CACACCTTCTAAAAAATAAG+TGG | - | chr2_4:57381266-57381285 | None:intergenic | 30.0% |
| ! | TTTTAGCAAGTTACACCTTA+AGG | - | chr2_4:57381325-57381344 | None:intergenic | 30.0% |
| ! | AATCTTGTTTGCATGTGTAT+AGG | - | chr2_4:57381503-57381522 | None:intergenic | 30.0% |
| ACTGGTTAAGGATATGAAAA+AGG | - | chr2_4:57381776-57381795 | None:intergenic | 30.0% | |
| ! | TTCATTTGGGTTAGAAATAG+CGG | - | chr2_4:57381971-57381990 | None:intergenic | 30.0% |
| CATATGTGACATTGTTCATT+TGG | - | chr2_4:57381985-57382004 | None:intergenic | 30.0% | |
| TATATGCTACATCAAGGATT+TGG | - | chr2_4:57382422-57382441 | None:intergenic | 30.0% | |
| ATGGATCATAATCAACAAGG+AGG | + | chr2_4:57377094-57377113 | Msa0337380:CDS | 35.0% | |
| GAGAGTTGAGTTTAGAAAAG+AGG | - | chr2_4:57377189-57377208 | None:intergenic | 35.0% | |
| TCACCTTTGGATTATAGCTA+GGG | - | chr2_4:57377216-57377235 | None:intergenic | 35.0% | |
| ATCACCTTTGGATTATAGCT+AGG | - | chr2_4:57377217-57377236 | None:intergenic | 35.0% | |
| TGGAATAAAACCGAAAACCT+AGG | - | chr2_4:57377367-57377386 | None:intergenic | 35.0% | |
| TTGAATTGGAGAGATGATTG+AGG | - | chr2_4:57377566-57377585 | None:intergenic | 35.0% | |
| AACCAACTCTCCAATTAGAT+AGG | + | chr2_4:57378020-57378039 | Msa0337380:intron | 35.0% | |
| TTCCTATCTAATTGGAGAGT+TGG | - | chr2_4:57378025-57378044 | None:intergenic | 35.0% | |
| ACTCTCCAATTAGATAGGAA+CGG | + | chr2_4:57378025-57378044 | Msa0337380:intron | 35.0% | |
| TCATCTACTTGATCAGGTAA+TGG | - | chr2_4:57378169-57378188 | None:intergenic | 35.0% | |
| ATTACCTGATCAAGTAGATG+AGG | + | chr2_4:57378168-57378187 | Msa0337380:CDS | 35.0% | |
| ! | GCTAGAGACAAATCTAAAGT+TGG | + | chr2_4:57378210-57378229 | Msa0337380:CDS | 35.0% |
| ! | GACAAATCTAAAGTTGGCAA+AGG | + | chr2_4:57378216-57378235 | Msa0337380:CDS | 35.0% |
| TGTTACTATCACTTGTAGAG+TGG | - | chr2_4:57378359-57378378 | None:intergenic | 35.0% | |
| CTACAAGTGATAGTAACATG+TGG | + | chr2_4:57378361-57378380 | Msa0337380:CDS | 35.0% | |
| ACAAGTGATAGTAACATGTG+GGG | + | chr2_4:57378363-57378382 | Msa0337380:CDS | 35.0% | |
| TCTTCAAATTCTTCTTTGGC+TGG | + | chr2_4:57378451-57378470 | Msa0337380:CDS | 35.0% | |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr2_4:57378726-57378745 | None:intergenic | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | chr2_4:57378726-57378745 | Msa0337380:intron | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr2_4:57378726-57378745 | None:intergenic | 35.0% |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | + | chr2_4:57378726-57378745 | Msa0337380:intron | 35.0% |
| ACAGCCCCCTATATATATAT+AGG | + | chr2_4:57379008-57379027 | Msa0337380:intron | 35.0% | |
| CAGCCCCCTATATATATATA+GGG | + | chr2_4:57379009-57379028 | Msa0337380:intron | 35.0% | |
| ! | TACAAGGTCGCAATTTTGTA+GGG | - | chr2_4:57379529-57379548 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | - | chr2_4:57379528-57379547 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | + | chr2_4:57379528-57379547 | Msa0337380:intron | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | + | chr2_4:57379529-57379548 | Msa0337380:intron | 35.0% |
| ! | CAAAACTGGCATATTTTGCA+GGG | - | chr2_4:57379607-57379626 | None:intergenic | 35.0% |
| !!! | AAAACTGGCCTATTTTTGCA+GGG | - | chr2_4:57380920-57380939 | None:intergenic | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr2_4:57379717-57379736 | Msa0337380:intron | 35.0% |
| !!! | AAAACTGGCCTATTTTTGCA+GGG | - | chr2_4:57380920-57380939 | None:intergenic | 35.0% |
| !! | CAAAACTGGCATATTTTTGC+AGG | - | chr2_4:57379790-57379809 | None:intergenic | 35.0% |
| !!! | AAAACTGGCCTATTTTTGCA+GGG | + | chr2_4:57380920-57380939 | Msa0337380:intron | 35.0% |
| !!! | AAAACTGGCCTATTTTTGCA+GGG | + | chr2_4:57380920-57380939 | Msa0337380:intron | 35.0% |
| ! | CAAAACTGACCTATTTTGCA+GGG | + | chr2_4:57381040-57381059 | Msa0337380:intron | 35.0% |
| ! | CGCACCTTCTAAAAAATAAG+TGG | + | chr2_4:57381199-57381218 | Msa0337380:intron | 35.0% |
| TGTATGTTAGCAACTCCTAT+AGG | + | chr2_4:57381223-57381242 | Msa0337380:intron | 35.0% | |
| ACTCCCACATAAAAACTAGT+GGG | + | chr2_4:57381346-57381365 | Msa0337380:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr2_4:57381352-57381371 | None:intergenic | 35.0% |
| TTTGCATGTGTATAGGTTTG+CGG | - | chr2_4:57381496-57381515 | None:intergenic | 35.0% | |
| ! | TTTTTATGGGTCTTGCTAAC+CGG | + | chr2_4:57381631-57381650 | Msa0337380:intron | 35.0% |
| ATAGTGTGACATTGGTAAAC+TGG | + | chr2_4:57381872-57381891 | Msa0337380:intron | 35.0% | |
| TAATCTCCAAACTGAGTTGT+AGG | + | chr2_4:57382021-57382040 | Msa0337380:intron | 35.0% | |
| AATCTCCAAACTGAGTTGTA+GGG | + | chr2_4:57382022-57382041 | Msa0337380:intron | 35.0% | |
| ! | TTTTTCCCTACAACTCAGTT+TGG | - | chr2_4:57382030-57382049 | None:intergenic | 35.0% |
| CCAAATCGTAACAAAGATTG+TGG | - | chr2_4:57382260-57382279 | None:intergenic | 35.0% | |
| CCACAATCTTTGTTACGATT+TGG | + | chr2_4:57382257-57382276 | Msa0337380:CDS | 35.0% | |
| ! | CGATTTGGAGAAACCAAAAT+AGG | + | chr2_4:57382272-57382291 | Msa0337380:CDS | 35.0% |
| ! | TTTCAATCTCTCGCCTATTT+TGG | - | chr2_4:57382288-57382307 | None:intergenic | 35.0% |
| !! | AGATTGAAAGCATTTGTGGA+AGG | + | chr2_4:57382299-57382318 | Msa0337380:CDS | 35.0% |
| ATTTCAAGATCCCAGAATTG+AGG | - | chr2_4:57382350-57382369 | None:intergenic | 35.0% | |
| !! | CAATTCTGGGATCTTGAAAT+TGG | + | chr2_4:57382350-57382369 | Msa0337380:CDS | 35.0% |
| TTGAAATTGGAAGTGAGAGT+TGG | + | chr2_4:57382363-57382382 | Msa0337380:CDS | 35.0% | |
| TGAAATTGGAAGTGAGAGTT+GGG | + | chr2_4:57382364-57382383 | Msa0337380:CDS | 35.0% | |
| ! | TCAAGGATTTGGTAAACTCT+TGG | - | chr2_4:57382411-57382430 | None:intergenic | 35.0% |
| TCGACTTTGGTTGAAGAAGA+AGG | - | chr2_4:57377124-57377143 | None:intergenic | 40.0% | |
| TCTCCCTAGCTATAATCCAA+AGG | + | chr2_4:57377210-57377229 | Msa0337380:CDS | 40.0% | |
| !! | TCTTTGTTGTATTGGCTAGC+TGG | + | chr2_4:57377312-57377331 | Msa0337380:intron | 40.0% |
| !! | CTTTGTTGTATTGGCTAGCT+GGG | + | chr2_4:57377313-57377332 | Msa0337380:intron | 40.0% |
| GAGATGATTGAGGATAGATG+AGG | - | chr2_4:57377556-57377575 | None:intergenic | 40.0% | |
| !! | TAGCTAAGTTGGTGGAAGTT+AGG | - | chr2_4:57378058-57378077 | None:intergenic | 40.0% |
| TGTGATCAGCATAGCTAAGT+TGG | - | chr2_4:57378069-57378088 | None:intergenic | 40.0% | |
| ATAGCCTCATCTACTTGATC+AGG | - | chr2_4:57378175-57378194 | None:intergenic | 40.0% | |
| ATAGTAACATGTGGGGTTGA+TGG | + | chr2_4:57378370-57378389 | Msa0337380:CDS | 40.0% | |
| GCACAGTATGAAGAAGTGAA+TGG | - | chr2_4:57378477-57378496 | None:intergenic | 40.0% | |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr2_4:57378730-57378749 | None:intergenic | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr2_4:57378729-57378748 | None:intergenic | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | chr2_4:57378729-57378748 | Msa0337380:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | chr2_4:57378730-57378749 | Msa0337380:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | - | chr2_4:57378730-57378749 | None:intergenic | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | - | chr2_4:57378729-57378748 | None:intergenic | 40.0% |
| !!! | TGCACCTTAGTGTTTTTAGG+TGG | + | chr2_4:57378729-57378748 | Msa0337380:intron | 40.0% |
| !!! | GCACCTTAGTGTTTTTAGGT+GGG | + | chr2_4:57378730-57378749 | Msa0337380:intron | 40.0% |
| ! | CCAAAACTGGCATATTTTGC+AGG | - | chr2_4:57379608-57379627 | None:intergenic | 40.0% |
| ! | CCTGCAAAATATGCCAGTTT+TGG | + | chr2_4:57379605-57379624 | Msa0337380:intron | 40.0% |
| ! | CTTTTGGTCCCTGCAAAAAT+AGG | + | chr2_4:57379656-57379675 | Msa0337380:intron | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+AGG | - | chr2_4:57380919-57380938 | None:intergenic | 40.0% |
| ! | CTGCAAAAATAGGCCAGTTT+TGG | + | chr2_4:57379666-57379685 | Msa0337380:intron | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+AGG | - | chr2_4:57380919-57380938 | None:intergenic | 40.0% |
| ! | CTGCAAAAATAGGCCAGTTT+TGG | + | chr2_4:57379666-57379685 | Msa0337380:intron | 40.0% |
| ! | CTGCAAAAATAGGCCAGTTT+TGG | - | chr2_4:57379666-57379685 | None:intergenic | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+AGG | + | chr2_4:57380919-57380938 | Msa0337380:intron | 40.0% |
| ! | CTTTTGGTCCCTGCAAAAAT+AGG | - | chr2_4:57379656-57379675 | None:intergenic | 40.0% |
| ! | CTGCAAAAATAGGCCAGTTT+TGG | - | chr2_4:57379666-57379685 | None:intergenic | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+AGG | + | chr2_4:57380919-57380938 | Msa0337380:intron | 40.0% |
| ! | CTTTTGGTCCCTGCAAAAAT+AGG | - | chr2_4:57379656-57379675 | None:intergenic | 40.0% |
| ! | CCTGCAAAATAGGTCAGTTT+TGG | - | chr2_4:57381042-57381061 | None:intergenic | 40.0% |
| ! | CCAAAACTGACCTATTTTGC+AGG | + | chr2_4:57381039-57381058 | Msa0337380:intron | 40.0% |
| AACTCCTATAGGCATTTGCT+AGG | + | chr2_4:57381234-57381253 | Msa0337380:intron | 40.0% | |
| GTATCCTAGCAAATGCCTAT+AGG | - | chr2_4:57381241-57381260 | None:intergenic | 40.0% | |
| CACTCCCACATAAAAACTAG+TGG | + | chr2_4:57381345-57381364 | Msa0337380:intron | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr2_4:57381353-57381372 | None:intergenic | 40.0% |
| ! | GTTCGAGTTTCACTAGTTTC+AGG | + | chr2_4:57381545-57381564 | Msa0337380:intron | 40.0% |
| ! | TAAGCCACGAGTTAAGTTGT+CGG | - | chr2_4:57381578-57381597 | None:intergenic | 40.0% |
| TGATATGCTTAACTAGTGCC+CGG | - | chr2_4:57381662-57381681 | None:intergenic | 40.0% | |
| !! | CGAGAGATTGAAAGCATTTG+TGG | + | chr2_4:57382295-57382314 | Msa0337380:CDS | 40.0% |
| CAGGACCGTTCCTATCTAAT+TGG | - | chr2_4:57378033-57378052 | None:intergenic | 45.0% | |
| CAATTAGATAGGAACGGTCC+TGG | + | chr2_4:57378031-57378050 | Msa0337380:intron | 45.0% | |
| ! | GATCAGCATAGCTAAGTTGG+TGG | - | chr2_4:57378066-57378085 | None:intergenic | 45.0% |
| GGAAAGAAGAGATCACGTAG+TGG | + | chr2_4:57378259-57378278 | Msa0337380:CDS | 45.0% | |
| AAGAAGAGATCACGTAGTGG+TGG | + | chr2_4:57378262-57378281 | Msa0337380:CDS | 45.0% | |
| ACTGCATGAAGAGAACGTTG+AGG | + | chr2_4:57378423-57378442 | Msa0337380:CDS | 45.0% | |
| TCTTCATACTGTGCTTGCTC+AGG | + | chr2_4:57378483-57378502 | Msa0337380:CDS | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | + | chr2_4:57378536-57378555 | Msa0337380:intron | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | - | chr2_4:57378536-57378555 | None:intergenic | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | + | chr2_4:57378536-57378555 | Msa0337380:intron | 45.0% | |
| GCACCCACCTAAAAACACTA+AGG | - | chr2_4:57378536-57378555 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr2_4:57380905-57380924 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr2_4:57380905-57380924 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr2_4:57380905-57380924 | None:intergenic | 45.0% | |
| GCAGGGACTAAAAGCAAAAC+TGG | - | chr2_4:57379804-57379823 | None:intergenic | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr2_4:57380905-57380924 | Msa0337380:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | + | chr2_4:57380905-57380924 | Msa0337380:intron | 45.0% | |
| !! | GGTTTTGGTCCCTGCAAAAT+AGG | - | chr2_4:57379595-57379614 | None:intergenic | 45.0% |
| GTGTATAGGTTTGCGGCAAA+TGG | - | chr2_4:57381489-57381508 | None:intergenic | 45.0% | |
| ! | AAGCCACGAGTTAAGTTGTC+GGG | - | chr2_4:57381577-57381596 | None:intergenic | 45.0% |
| AAATTCTAACTGGTGCCTCC+GGG | - | chr2_4:57381801-57381820 | None:intergenic | 45.0% | |
| GAAATTCTAACTGGTGCCTC+CGG | - | chr2_4:57381802-57381821 | None:intergenic | 45.0% | |
| TGGAAACACAGCCTCAATTC+TGG | + | chr2_4:57382336-57382355 | Msa0337380:CDS | 45.0% | |
| GGAAACACAGCCTCAATTCT+GGG | + | chr2_4:57382337-57382356 | Msa0337380:CDS | 45.0% | |
| !!! | ATTATAATTTTTTAATTTGA+AGG | + | chr2_4:57377727-57377746 | Msa0337380:intron | 5.0% |
| !!! | TAAACTTTATTTTAATTAAA+AGG | - | chr2_4:57378656-57378675 | None:intergenic | 5.0% |
| !! | TAAAAAAATTAAAAAATTTC+TGG | + | chr2_4:57379880-57379899 | Msa0337380:intron | 5.0% |
| !! | GAAAAAAATATTAAAAAATT+CGG | + | chr2_4:57379928-57379947 | Msa0337380:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+GGG | + | chr2_4:57379929-57379948 | Msa0337380:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr2_4:57379929-57379948 | None:intergenic | 5.0% |
| !! | TAAAAAATATAAAAAAATTC+TGG | - | chr2_4:57380810-57380829 | None:intergenic | 5.0% |
| !! | AAAAAAAATTAAAAAAATTC+TGG | - | chr2_4:57380849-57380868 | None:intergenic | 5.0% |
| !! | AGTTGGTGGAAGTTAGGACC+AGG | - | chr2_4:57378052-57378071 | None:intergenic | 50.0% |
| TGGGTGCAAGTTAACAGTGG+GGG | - | chr2_4:57378769-57378788 | None:intergenic | 50.0% | |
| GTGGGTGCAAGTTAACAGTG+GGG | - | chr2_4:57378770-57378789 | None:intergenic | 50.0% | |
| GGTGGGTGCAAGTTAACAGT+GGG | - | chr2_4:57378771-57378790 | None:intergenic | 50.0% | |
| AGGTGGGTGCAAGTTAACAG+TGG | - | chr2_4:57378746-57378765 | None:intergenic | 50.0% | |
| TTCCCCGACAACTTAACTCG+TGG | + | chr2_4:57381571-57381590 | Msa0337380:intron | 50.0% | |
| ! | AGCCACGAGTTAAGTTGTCG+GGG | - | chr2_4:57381576-57381595 | None:intergenic | 50.0% |
| TATGCTTAACTAGTGCCCGG+AGG | - | chr2_4:57381659-57381678 | None:intergenic | 50.0% | |
| CATATCCTTAACCAGTGCCC+CGG | + | chr2_4:57381780-57381799 | Msa0337380:intron | 50.0% | |
| AATTCTAACTGGTGCCTCCG+GGG | - | chr2_4:57381800-57381819 | None:intergenic | 50.0% | |
| CTGTGTTTCCACATCGCTCA+CGG | - | chr2_4:57382327-57382346 | None:intergenic | 50.0% | |
| GTCTTGCTAACCGGTGCCTC+CGG | + | chr2_4:57381640-57381659 | Msa0337380:intron | 60.0% | |
| TCTTGCTAACCGGTGCCTCC+GGG | + | chr2_4:57381641-57381660 | Msa0337380:intron | 60.0% | |
| ! | TAACTAGTGCCCGGAGGCAC+CGG | - | chr2_4:57381653-57381672 | None:intergenic | 60.0% |
| ATCCTTAACCAGTGCCCCGG+AGG | + | chr2_4:57381783-57381802 | Msa0337380:intron | 60.0% | |
| GGAAGGATCCGTGAGCGATG+TGG | + | chr2_4:57382316-57382335 | Msa0337380:CDS | 60.0% | |
| !! | TGCCTCCGGGGCACTGGTTA+AGG | - | chr2_4:57381788-57381807 | None:intergenic | 65.0% |
| AACTGGTGCCTCCGGGGCAC+TGG | - | chr2_4:57381794-57381813 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 57377094 | 57382452 | 57377094 | ID=Msa0337380;Name=Msa0337380 |
| chr2_4 | mRNA | 57377094 | 57382452 | 57377094 | ID=Msa0337380-mRNA-1;Parent=Msa0337380;Name=Msa0337380-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.5|0.33|1|1|1|3|22|221 |
| chr2_4 | exon | 57377094 | 57377231 | 57377094 | ID=Msa0337380-mRNA-1:exon:17479;Parent=Msa0337380-mRNA-1 |
| chr2_4 | exon | 57378154 | 57378504 | 57378154 | ID=Msa0337380-mRNA-1:exon:17480;Parent=Msa0337380-mRNA-1 |
| chr2_4 | exon | 57382254 | 57382452 | 57382254 | ID=Msa0337380-mRNA-1:exon:17481;Parent=Msa0337380-mRNA-1 |
| chr2_4 | CDS | 57377094 | 57377231 | 57377094 | ID=Msa0337380-mRNA-1:cds;Parent=Msa0337380-mRNA-1 |
| chr2_4 | CDS | 57378154 | 57378504 | 57378154 | ID=Msa0337380-mRNA-1:cds;Parent=Msa0337380-mRNA-1 |
| chr2_4 | CDS | 57382254 | 57382430 | 57382254 | ID=Msa0337380-mRNA-1:cds;Parent=Msa0337380-mRNA-1 |
| chr2_4 | three_prime_UTR | 57382431 | 57382452 | 57382431 | ID=Msa0337380-mRNA-1:three_prime_utr;Parent=Msa0337380-mRNA-1 |
| Gene Sequence |
| Protein sequence |
