AlfalfaGEDB | Msa0343480

M. sativa cultivar zhongmu-4 / Msa0343480

KEGG: -
GO: GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007 GO:0071704 GO:0140096 GO:1901564
PFAM: PF07714.20

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0343480	XP_004511375.1	87.963	108	13	0	1	108	107	214	1.82e-62	204

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0343480	A0A1S3EFZ7	87.963	108	13	0	1	108	107	214	8.70e-63	204

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0343480	MtrunA17_Chr5g0394681	93.519	108	7	0	1	108	110	217	1.21e-64	200
Msa0343480	MtrunA17_Chr2g0322631	89.815	108	11	0	1	108	2	109	5.75e-64	189
Msa0343480	MtrunA17_Chr1g0205071	73.148	108	26	1	1	108	105	209	2.93e-52	168
Msa0343480	MtrunA17_Chr6g0450871	60.185	108	39	1	1	108	99	202	2.60e-44	147
Msa0343480	MtrunA17_Chr4g0059181	58.333	108	41	1	1	108	116	219	4.18e-43	144
Msa0343480	MtrunA17_Chr3g0117811	56.481	108	43	1	1	108	87	190	2.79e-42	142

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0343480	AT3G22750.1	75.926	108	23	1	1	108	101	205	4.65e-56	178
Msa0343480	AT3G63260.2	62.385	109	40	1	1	108	110	218	1.82e-44	147
Msa0343480	AT5G50000.2	59.259	108	40	1	1	108	109	212	4.61e-44	145
Msa0343480	AT3G01490.2	58.333	108	41	1	1	108	135	238	6.32e-44	146
Msa0343480	AT3G63260.1	62.385	109	40	1	1	108	110	218	1.12e-43	146
Msa0343480	AT5G50000.1	59.259	108	40	1	1	108	109	212	2.90e-43	145
Msa0343480	AT3G01490.1	58.333	108	41	1	1	108	135	238	3.04e-43	145
Msa0343480	AT4G14780.1	60.185	108	39	1	1	108	88	191	1.23e-41	140

Find 49 sgRNAs with CRISPR-Local

Find 116 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATCAAGAGAGCCTTCCTTCT+AGG	0.296164	3_1:+1626036	Msa0343480:CDS
GTAAACTGGCTCTTGATTCT+TGG	0.304096	3_1:-1626406	None:intergenic
GTCATTATCGAGTTTCTTCC+TGG	0.310502	3_1:+1626068	Msa0343480:CDS
TATGAATAACATAAAAGATT+TGG	0.328200	3_1:-1626383	None:intergenic
GTTGGTTGGTCAGGGAGGTT+TGG	0.341656	3_1:+1626328	Msa0343480:three_prime_UTR
GTAATTACTTTCGTGGCATT+TGG	0.348193	3_1:-1625836	None:intergenic
TTAGTTAGATCAAAGTAAAC+TGG	0.361464	3_1:-1626420	None:intergenic
CCGCTTTACGTGCATCCTTT+AGG	0.379939	3_1:+1625780	Msa0343480:CDS
ACAGTTTGTTGGAGCTTCAA+TGG	0.393917	3_1:+1625968	Msa0343480:intron
AGGAAGGCTCTCTTGATTGT+TGG	0.420994	3_1:-1626030	None:intergenic
CAGTTTGTTGGAGCTTCAAT+GGG	0.427793	3_1:+1625969	Msa0343480:intron
TTATGCAGTTTCTAAATTGT+AGG	0.433098	3_1:-1626203	None:intergenic
TACAGTGAAAGTGTTGGATT+GGG	0.437367	3_1:+1625724	None:intergenic
TTTCATAGGTTGGTTGGTCA+GGG	0.447001	3_1:+1626320	Msa0343480:intron
TTACAGTGAAAGTGTTGGAT+TGG	0.447749	3_1:+1625723	None:intergenic
TATGCAGTTTCTAAATTGTA+GGG	0.455047	3_1:-1626202	None:intergenic
TCAAGAGAGCCTTCCTTCTA+GGG	0.459431	3_1:+1626037	Msa0343480:CDS
AGCAATACTTGATAAGCAAT+AGG	0.469378	3_1:+1626102	Msa0343480:CDS
ATGACGCAACAAGCCCTAGA+AGG	0.472299	3_1:-1626050	None:intergenic
CTGCATAAACTTATTTGCAC+AGG	0.473439	3_1:+1626218	Msa0343480:three_prime_UTR
GTGTTGGATTGGGGTGAGGA+TGG	0.484415	3_1:+1625734	Msa0343480:CDS
TTTACGTGCATCCTTTAGGC+AGG	0.486797	3_1:+1625784	Msa0343480:CDS
TCAGGGAGGTTTGGTCACCT+TGG	0.487391	3_1:+1626337	Msa0343480:three_prime_UTR
GTTTGGTCACCTTGGTTTAG+CGG	0.492767	3_1:+1626345	Msa0343480:three_prime_UTR
AGAGTGAGTAATTACTTTCG+TGG	0.501129	3_1:-1625843	None:intergenic
TTAGGCAGGAGGTTGCCGTC+TGG	0.521503	3_1:+1625798	Msa0343480:CDS
GACGGCAACCTCCTGCCTAA+AGG	0.523170	3_1:-1625795	None:intergenic
GGCGGAAGAAACTTGCGTAT+AGG	0.526676	3_1:+1626123	Msa0343480:CDS
TTACTTTCGTGGCATTTGGA+TGG	0.532887	3_1:-1625832	None:intergenic
CGCAACAAGCCCTAGAAGGA+AGG	0.547186	3_1:-1626046	None:intergenic
CATAGGTTGGTTGGTCAGGG+AGG	0.560582	3_1:+1626323	Msa0343480:intron
GAAACTTGCGTATAGGATTG+TGG	0.564528	3_1:+1626130	Msa0343480:CDS
ACGTGCATCCTTTAGGCAGG+AGG	0.566992	3_1:+1625787	Msa0343480:CDS
GAAAGTGTTGGATTGGGGTG+AGG	0.578201	3_1:+1625730	None:intergenic
ATTATCGAGTTTCTTCCTGG+TGG	0.578291	3_1:+1626071	Msa0343480:CDS
CTTGCTTTCGACCTCTCCTG+AGG	0.587016	3_1:+1626158	Msa0343480:CDS
TTGCTTTCGACCTCTCCTGA+GGG	0.587134	3_1:+1626159	Msa0343480:CDS
AGCGGTAATTTCCGCAGCGG+TGG	0.597263	3_1:-1625762	None:intergenic
TTTAGCGGTGAACTTGATCA+CGG	0.611119	3_1:+1626360	Msa0343480:three_prime_UTR
TGCATAAACTTATTTGCACA+GGG	0.621499	3_1:+1626219	Msa0343480:three_prime_UTR
CCTAAAGGATGCACGTAAAG+CGG	0.623774	3_1:-1625780	None:intergenic
TATTGCTTTAGTGTTCCACC+AGG	0.635567	3_1:-1626086	None:intergenic
ACAGTGAAAGTGTTGGATTG+GGG	0.638816	3_1:+1625725	None:intergenic
ATGGTCGAGTTTGTGCCAGA+CGG	0.639001	3_1:-1625813	None:intergenic
AATACTTGATAAGCAATAGG+CGG	0.676414	3_1:+1626105	Msa0343480:CDS
CGGAGACATACCCTCAGGAG+AGG	0.677550	3_1:-1626169	None:intergenic
TCAAGTTCACCGCTAAACCA+AGG	0.689092	3_1:-1626354	None:intergenic
TAAAGCGGTAATTTCCGCAG+CGG	0.725492	3_1:-1625765	None:intergenic
GGATGGTGCTGCCACCGCTG+CGG	0.734307	3_1:+1625751	Msa0343480:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TATGAATAACATAAAAGATT+TGG	-	chr3_1:1626386-1626405	None:intergenic	15.0%
!!	TATGAATAACATAAAAGATT+TGG	-	chr3_1:1626386-1626405	None:intergenic	15.0%
!!!	CAATTTTGTATTGATGAATC+AGG	+	chr3_1:1625902-1625921	Msa0343480:intron	25.0%
!!!	TTATTTTTGCAACAGTTTGT+TGG	+	chr3_1:1625957-1625976	Msa0343480:intron	25.0%
!	AATTGTAGGGATAGTAAAAA+CGG	-	chr3_1:1626192-1626211	None:intergenic	25.0%
!	TATGCAGTTTCTAAATTGTA+GGG	-	chr3_1:1626205-1626224	None:intergenic	25.0%
!	TTATGCAGTTTCTAAATTGT+AGG	-	chr3_1:1626206-1626225	None:intergenic	25.0%
!	TTAGTTAGATCAAAGTAAAC+TGG	-	chr3_1:1626423-1626442	None:intergenic	25.0%
!!!	CAATTTTGTATTGATGAATC+AGG	+	chr3_1:1625902-1625921	Msa0343480:intron	25.0%
!!!	TTATTTTTGCAACAGTTTGT+TGG	+	chr3_1:1625957-1625976	Msa0343480:intron	25.0%
!	AATTGTAGGGATAGTAAAAA+CGG	-	chr3_1:1626192-1626211	None:intergenic	25.0%
!	TATGCAGTTTCTAAATTGTA+GGG	-	chr3_1:1626205-1626224	None:intergenic	25.0%
!	TTATGCAGTTTCTAAATTGT+AGG	-	chr3_1:1626206-1626225	None:intergenic	25.0%
!	TTAGTTAGATCAAAGTAAAC+TGG	-	chr3_1:1626423-1626442	None:intergenic	25.0%
!!!	TTGGTTGAAGAGTTTTTTGT+AGG	-	chr3_1:1626014-1626033	None:intergenic	30.0%
	AGCAATACTTGATAAGCAAT+AGG	+	chr3_1:1626102-1626121	Msa0343480:CDS	30.0%
	AATACTTGATAAGCAATAGG+CGG	+	chr3_1:1626105-1626124	Msa0343480:CDS	30.0%
	TGCATAAACTTATTTGCACA+GGG	+	chr3_1:1626219-1626238	Msa0343480:three_prime_UTR	30.0%
!!!	TTGGTTGAAGAGTTTTTTGT+AGG	-	chr3_1:1626014-1626033	None:intergenic	30.0%
	AGCAATACTTGATAAGCAAT+AGG	+	chr3_1:1626102-1626121	Msa0343480:CDS	30.0%
	AATACTTGATAAGCAATAGG+CGG	+	chr3_1:1626105-1626124	Msa0343480:CDS	30.0%
	TGCATAAACTTATTTGCACA+GGG	+	chr3_1:1626219-1626238	Msa0343480:three_prime_UTR	30.0%
	GTAATTACTTTCGTGGCATT+TGG	-	chr3_1:1625839-1625858	None:intergenic	35.0%
	AGAGTGAGTAATTACTTTCG+TGG	-	chr3_1:1625846-1625865	None:intergenic	35.0%
	CTGCATAAACTTATTTGCAC+AGG	+	chr3_1:1626218-1626237	Msa0343480:three_prime_UTR	35.0%
	GGAATTGGTACAAAGCAAAT+TGG	-	chr3_1:1626272-1626291	None:intergenic	35.0%
	TCAGAATATGTACACGGAAT+TGG	-	chr3_1:1626287-1626306	None:intergenic	35.0%
	ATTCCGTGTACATATTCTGA+TGG	+	chr3_1:1626287-1626306	Msa0343480:intron	35.0%
	CATCCATCAGAATATGTACA+CGG	-	chr3_1:1626293-1626312	None:intergenic	35.0%
!!	ATGGATGTTCTGCTTTTCAT+AGG	+	chr3_1:1626306-1626325	Msa0343480:intron	35.0%
!!	ATGTTCTGCTTTTCATAGGT+TGG	+	chr3_1:1626310-1626329	Msa0343480:intron	35.0%
	GTAATTACTTTCGTGGCATT+TGG	-	chr3_1:1625839-1625858	None:intergenic	35.0%
	AGAGTGAGTAATTACTTTCG+TGG	-	chr3_1:1625846-1625865	None:intergenic	35.0%
	CTGCATAAACTTATTTGCAC+AGG	+	chr3_1:1626218-1626237	Msa0343480:three_prime_UTR	35.0%
	GGAATTGGTACAAAGCAAAT+TGG	-	chr3_1:1626272-1626291	None:intergenic	35.0%
	TCAGAATATGTACACGGAAT+TGG	-	chr3_1:1626287-1626306	None:intergenic	35.0%
	ATTCCGTGTACATATTCTGA+TGG	+	chr3_1:1626287-1626306	Msa0343480:intron	35.0%
	CATCCATCAGAATATGTACA+CGG	-	chr3_1:1626293-1626312	None:intergenic	35.0%
!!	ATGGATGTTCTGCTTTTCAT+AGG	+	chr3_1:1626306-1626325	Msa0343480:intron	35.0%
!!	ATGTTCTGCTTTTCATAGGT+TGG	+	chr3_1:1626310-1626329	Msa0343480:intron	35.0%
	TTACTTTCGTGGCATTTGGA+TGG	-	chr3_1:1625835-1625854	None:intergenic	40.0%
!!	ACAGTTTGTTGGAGCTTCAA+TGG	+	chr3_1:1625968-1625987	Msa0343480:intron	40.0%
!!	CAGTTTGTTGGAGCTTCAAT+GGG	+	chr3_1:1625969-1625988	Msa0343480:intron	40.0%
	GTCATTATCGAGTTTCTTCC+TGG	+	chr3_1:1626068-1626087	Msa0343480:CDS	40.0%
	ATTATCGAGTTTCTTCCTGG+TGG	+	chr3_1:1626071-1626090	Msa0343480:CDS	40.0%
	TATTGCTTTAGTGTTCCACC+AGG	-	chr3_1:1626089-1626108	None:intergenic	40.0%
	GAAACTTGCGTATAGGATTG+TGG	+	chr3_1:1626130-1626149	Msa0343480:CDS	40.0%
!!!	TCTGCTTTTCATAGGTTGGT+TGG	+	chr3_1:1626314-1626333	Msa0343480:intron	40.0%
!!!	TTTTCATAGGTTGGTTGGTC+AGG	+	chr3_1:1626319-1626338	Msa0343480:intron	40.0%
!!	TTTCATAGGTTGGTTGGTCA+GGG	+	chr3_1:1626320-1626339	Msa0343480:intron	40.0%
	TTTAGCGGTGAACTTGATCA+CGG	+	chr3_1:1626360-1626379	Msa0343480:three_prime_UTR	40.0%
!	GTAAACTGGCTCTTGATTCT+TGG	-	chr3_1:1626409-1626428	None:intergenic	40.0%
	TTACTTTCGTGGCATTTGGA+TGG	-	chr3_1:1625835-1625854	None:intergenic	40.0%
!!	ACAGTTTGTTGGAGCTTCAA+TGG	+	chr3_1:1625968-1625987	Msa0343480:intron	40.0%
!!	CAGTTTGTTGGAGCTTCAAT+GGG	+	chr3_1:1625969-1625988	Msa0343480:intron	40.0%
	GTCATTATCGAGTTTCTTCC+TGG	+	chr3_1:1626068-1626087	Msa0343480:CDS	40.0%
	ATTATCGAGTTTCTTCCTGG+TGG	+	chr3_1:1626071-1626090	Msa0343480:CDS	40.0%
	TATTGCTTTAGTGTTCCACC+AGG	-	chr3_1:1626089-1626108	None:intergenic	40.0%
	GAAACTTGCGTATAGGATTG+TGG	+	chr3_1:1626130-1626149	Msa0343480:CDS	40.0%
!!!	TCTGCTTTTCATAGGTTGGT+TGG	+	chr3_1:1626314-1626333	Msa0343480:intron	40.0%
!!!	TTTTCATAGGTTGGTTGGTC+AGG	+	chr3_1:1626319-1626338	Msa0343480:intron	40.0%
!!	TTTCATAGGTTGGTTGGTCA+GGG	+	chr3_1:1626320-1626339	Msa0343480:intron	40.0%
	TTTAGCGGTGAACTTGATCA+CGG	+	chr3_1:1626360-1626379	Msa0343480:three_prime_UTR	40.0%
!	GTAAACTGGCTCTTGATTCT+TGG	-	chr3_1:1626409-1626428	None:intergenic	40.0%
	TAAAGCGGTAATTTCCGCAG+CGG	-	chr3_1:1625768-1625787	None:intergenic	45.0%
	CCTAAAGGATGCACGTAAAG+CGG	-	chr3_1:1625783-1625802	None:intergenic	45.0%
	TTTACGTGCATCCTTTAGGC+AGG	+	chr3_1:1625784-1625803	Msa0343480:CDS	45.0%
	AGGAAGGCTCTCTTGATTGT+TGG	-	chr3_1:1626033-1626052	None:intergenic	45.0%
	ATCAAGAGAGCCTTCCTTCT+AGG	+	chr3_1:1626036-1626055	Msa0343480:CDS	45.0%
	TCAAGAGAGCCTTCCTTCTA+GGG	+	chr3_1:1626037-1626056	Msa0343480:CDS	45.0%
	AAAAACGGAGACATACCCTC+AGG	-	chr3_1:1626177-1626196	None:intergenic	45.0%
	GTTTGGTCACCTTGGTTTAG+CGG	+	chr3_1:1626345-1626364	Msa0343480:three_prime_UTR	45.0%
	TCAAGTTCACCGCTAAACCA+AGG	-	chr3_1:1626357-1626376	None:intergenic	45.0%
	TAAAGCGGTAATTTCCGCAG+CGG	-	chr3_1:1625768-1625787	None:intergenic	45.0%
	CCTAAAGGATGCACGTAAAG+CGG	-	chr3_1:1625783-1625802	None:intergenic	45.0%
	TTTACGTGCATCCTTTAGGC+AGG	+	chr3_1:1625784-1625803	Msa0343480:CDS	45.0%
	AGGAAGGCTCTCTTGATTGT+TGG	-	chr3_1:1626033-1626052	None:intergenic	45.0%
	ATCAAGAGAGCCTTCCTTCT+AGG	+	chr3_1:1626036-1626055	Msa0343480:CDS	45.0%
	TCAAGAGAGCCTTCCTTCTA+GGG	+	chr3_1:1626037-1626056	Msa0343480:CDS	45.0%
	AAAAACGGAGACATACCCTC+AGG	-	chr3_1:1626177-1626196	None:intergenic	45.0%
	GTTTGGTCACCTTGGTTTAG+CGG	+	chr3_1:1626345-1626364	Msa0343480:three_prime_UTR	45.0%
	TCAAGTTCACCGCTAAACCA+AGG	-	chr3_1:1626357-1626376	None:intergenic	45.0%
	CCGCTTTACGTGCATCCTTT+AGG	+	chr3_1:1625780-1625799	Msa0343480:CDS	50.0%
	ATGGTCGAGTTTGTGCCAGA+CGG	-	chr3_1:1625816-1625835	None:intergenic	50.0%
	ATGACGCAACAAGCCCTAGA+AGG	-	chr3_1:1626053-1626072	None:intergenic	50.0%
	GGCGGAAGAAACTTGCGTAT+AGG	+	chr3_1:1626123-1626142	Msa0343480:CDS	50.0%
	TTGCTTTCGACCTCTCCTGA+GGG	+	chr3_1:1626159-1626178	Msa0343480:CDS	50.0%
	CCGCTTTACGTGCATCCTTT+AGG	+	chr3_1:1625780-1625799	Msa0343480:CDS	50.0%
	ATGGTCGAGTTTGTGCCAGA+CGG	-	chr3_1:1625816-1625835	None:intergenic	50.0%
	ATGACGCAACAAGCCCTAGA+AGG	-	chr3_1:1626053-1626072	None:intergenic	50.0%
	GGCGGAAGAAACTTGCGTAT+AGG	+	chr3_1:1626123-1626142	Msa0343480:CDS	50.0%
	TTGCTTTCGACCTCTCCTGA+GGG	+	chr3_1:1626159-1626178	Msa0343480:CDS	50.0%
!	GTGTTGGATTGGGGTGAGGA+TGG	+	chr3_1:1625734-1625753	Msa0343480:CDS	55.0%
	ACGTGCATCCTTTAGGCAGG+AGG	+	chr3_1:1625787-1625806	Msa0343480:CDS	55.0%
	CGCAACAAGCCCTAGAAGGA+AGG	-	chr3_1:1626049-1626068	None:intergenic	55.0%
	CTTGCTTTCGACCTCTCCTG+AGG	+	chr3_1:1626158-1626177	Msa0343480:CDS	55.0%
!!	CATAGGTTGGTTGGTCAGGG+AGG	+	chr3_1:1626323-1626342	Msa0343480:intron	55.0%
!	GTTGGTTGGTCAGGGAGGTT+TGG	+	chr3_1:1626328-1626347	Msa0343480:three_prime_UTR	55.0%
!	TCAGGGAGGTTTGGTCACCT+TGG	+	chr3_1:1626337-1626356	Msa0343480:three_prime_UTR	55.0%
!	GTGTTGGATTGGGGTGAGGA+TGG	+	chr3_1:1625734-1625753	Msa0343480:CDS	55.0%
	ACGTGCATCCTTTAGGCAGG+AGG	+	chr3_1:1625787-1625806	Msa0343480:CDS	55.0%
	CGCAACAAGCCCTAGAAGGA+AGG	-	chr3_1:1626049-1626068	None:intergenic	55.0%
	CTTGCTTTCGACCTCTCCTG+AGG	+	chr3_1:1626158-1626177	Msa0343480:CDS	55.0%
!!	CATAGGTTGGTTGGTCAGGG+AGG	+	chr3_1:1626323-1626342	Msa0343480:intron	55.0%
!	GTTGGTTGGTCAGGGAGGTT+TGG	+	chr3_1:1626328-1626347	Msa0343480:three_prime_UTR	55.0%
!	TCAGGGAGGTTTGGTCACCT+TGG	+	chr3_1:1626337-1626356	Msa0343480:three_prime_UTR	55.0%
	AGCGGTAATTTCCGCAGCGG+TGG	-	chr3_1:1625765-1625784	None:intergenic	60.0%
	GACGGCAACCTCCTGCCTAA+AGG	-	chr3_1:1625798-1625817	None:intergenic	60.0%
	TTAGGCAGGAGGTTGCCGTC+TGG	+	chr3_1:1625798-1625817	Msa0343480:CDS	60.0%
	CGGAGACATACCCTCAGGAG+AGG	-	chr3_1:1626172-1626191	None:intergenic	60.0%
	AGCGGTAATTTCCGCAGCGG+TGG	-	chr3_1:1625765-1625784	None:intergenic	60.0%
	GACGGCAACCTCCTGCCTAA+AGG	-	chr3_1:1625798-1625817	None:intergenic	60.0%
	TTAGGCAGGAGGTTGCCGTC+TGG	+	chr3_1:1625798-1625817	Msa0343480:CDS	60.0%
	CGGAGACATACCCTCAGGAG+AGG	-	chr3_1:1626172-1626191	None:intergenic	60.0%
!!	GGATGGTGCTGCCACCGCTG+CGG	+	chr3_1:1625751-1625770	Msa0343480:CDS	70.0%
!!	GGATGGTGCTGCCACCGCTG+CGG	+	chr3_1:1625751-1625770	Msa0343480:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	1625731	1626565	1625731	ID=Msa0343480;Name=Msa0343480
chr3_1	mRNA	1625731	1626565	1625731	ID=Msa0343480-mRNA-1;Parent=Msa0343480;Name=Msa0343480-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0\|1\|0.66\|1\|0.5\|0\|3\|300\|108
chr3_1	exon	1625731	1625850	1625731	ID=Msa0343480-mRNA-1:exon:518;Parent=Msa0343480-mRNA-1
chr3_1	exon	1625972	1626240	1625972	ID=Msa0343480-mRNA-1:exon:519;Parent=Msa0343480-mRNA-1
chr3_1	exon	1626328	1626565	1626328	ID=Msa0343480-mRNA-1:exon:520;Parent=Msa0343480-mRNA-1
chr3_1	CDS	1625731	1625850	1625731	ID=Msa0343480-mRNA-1:cds;Parent=Msa0343480-mRNA-1
chr3_1	CDS	1625972	1626178	1625972	ID=Msa0343480-mRNA-1:cds;Parent=Msa0343480-mRNA-1
chr3_1	three_prime_UTR	1626179	1626240	1626179	ID=Msa0343480-mRNA-1:three_prime_utr;Parent=Msa0343480-mRNA-1
chr3_1	three_prime_UTR	1626328	1626565	1626328	ID=Msa0343480-mRNA-1:three_prime_utr;Parent=Msa0343480-mRNA-1

Gene Sequence	>Msa0343480 AAAGTGTTGGATTGGGGTGAGGATGGTGCTGCCACCGCTGCGGAAATTACCGCTTTACGTGCATCCTTTAGGCAGGAGGTTGCCGTCTGGCACAAACTCGACCATCCAAATGCCACGAAATTTGTTGGAGCTTCAATGGGAACTTCAAATCTTAAGATTCCTACAAAAAACTCTTCAACCAACAATCAAGAGAGCCTTCCTTCTAGGGCTTGTTGCGTCATTATCGAGTTTCTTCCTGGTGGAACACTAAAGCAATACTTGATAAGCAATAGGCGGAAGAAACTTGCGTATAGGATTGTGGTTCAGCTTGCTTTCGACCTCTCCTGA
Protein sequence	>Msa0343480 KVLDWGEDGAATAAEITALRASFRQEVAVWHKLDHPNATKFVGASMGTSNLKIPTKNSSTNNQESLPSRACCVIIEFLPGGTLKQYLISNRRKKLAYRIVVQLAFDLS*