Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344030 | XP_013463268.1 | 89.247 | 372 | 37 | 2 | 25 | 396 | 15 | 383 | 0.0 | 663 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344030 | A0A072VGJ1 | 89.247 | 372 | 37 | 2 | 25 | 396 | 15 | 383 | 0.0 | 663 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0344030 | TR | mTERF |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344030 | MtrunA17_Chr2g0296111 | 89.247 | 372 | 37 | 2 | 25 | 396 | 15 | 383 | 0.0 | 663 |
| Msa0344030 | MtrunA17_Chr2g0296121 | 66.751 | 397 | 125 | 4 | 1 | 396 | 79 | 469 | 0.0 | 516 |
| Msa0344030 | MtrunA17_Chr2g0296151 | 66.247 | 397 | 117 | 5 | 1 | 395 | 1 | 382 | 0.0 | 514 |
| Msa0344030 | MtrunA17_Chr2g0295731 | 63.496 | 389 | 125 | 4 | 3 | 387 | 6 | 381 | 1.94e-170 | 481 |
| Msa0344030 | MtrunA17_Chr2g0295741 | 64.844 | 384 | 128 | 4 | 14 | 396 | 12 | 389 | 6.24e-170 | 480 |
| Msa0344030 | MtrunA17_Chr4g0067121 | 54.755 | 347 | 151 | 4 | 48 | 392 | 47 | 389 | 1.63e-125 | 367 |
| Msa0344030 | MtrunA17_Chr2g0296711 | 53.779 | 344 | 153 | 3 | 54 | 393 | 55 | 396 | 2.49e-124 | 366 |
| Msa0344030 | MtrunA17_Chr2g0296221 | 52.800 | 375 | 164 | 6 | 27 | 391 | 51 | 422 | 2.51e-123 | 363 |
| Msa0344030 | MtrunA17_Chr2g0296741 | 53.561 | 351 | 157 | 3 | 41 | 387 | 59 | 407 | 1.21e-122 | 361 |
| Msa0344030 | MtrunA17_Chr2g0296251 | 50.643 | 389 | 147 | 6 | 36 | 383 | 14 | 398 | 1.33e-122 | 360 |
| Msa0344030 | MtrunA17_Chr2g0296721 | 53.390 | 354 | 160 | 4 | 41 | 391 | 39 | 390 | 7.04e-122 | 358 |
| Msa0344030 | MtrunA17_Chr2g0296301 | 50.712 | 351 | 168 | 3 | 40 | 387 | 22 | 370 | 3.35e-119 | 351 |
| Msa0344030 | MtrunA17_Chr2g0315731 | 52.394 | 355 | 163 | 3 | 41 | 391 | 59 | 411 | 3.88e-119 | 352 |
| Msa0344030 | MtrunA17_Chr2g0296231 | 50.815 | 368 | 172 | 6 | 27 | 391 | 27 | 388 | 5.67e-117 | 346 |
| Msa0344030 | MtrunA17_Chr2g0296171 | 53.495 | 372 | 154 | 7 | 27 | 383 | 28 | 395 | 1.25e-116 | 345 |
| Msa0344030 | MtrunA17_Chr2g0296291 | 49.740 | 384 | 150 | 5 | 47 | 391 | 27 | 406 | 1.43e-116 | 345 |
| Msa0344030 | MtrunA17_Chr2g0296191 | 53.151 | 365 | 156 | 7 | 27 | 380 | 634 | 994 | 3.38e-111 | 349 |
| Msa0344030 | MtrunA17_Chr2g0296191 | 50.660 | 379 | 164 | 6 | 7 | 382 | 151 | 509 | 1.36e-108 | 342 |
| Msa0344030 | MtrunA17_Chr2g0296181 | 50.135 | 371 | 147 | 8 | 27 | 391 | 27 | 365 | 2.93e-108 | 323 |
| Msa0344030 | MtrunA17_Chr2g0295761 | 48.266 | 346 | 173 | 4 | 43 | 386 | 51 | 392 | 2.79e-106 | 318 |
| Msa0344030 | MtrunA17_Chr4g0067141 | 44.974 | 378 | 195 | 6 | 7 | 381 | 3 | 370 | 1.81e-95 | 290 |
| Msa0344030 | MtrunA17_Chr4g0067671 | 44.687 | 367 | 189 | 5 | 7 | 370 | 3 | 358 | 1.91e-89 | 274 |
| Msa0344030 | MtrunA17_Chr2g0296161 | 72.941 | 170 | 45 | 1 | 227 | 395 | 1 | 170 | 2.84e-85 | 256 |
| Msa0344030 | MtrunA17_Chr2g0286191 | 46.269 | 335 | 169 | 7 | 53 | 383 | 32 | 359 | 5.23e-85 | 263 |
| Msa0344030 | MtrunA17_Chr2g0296131 | 65.497 | 171 | 58 | 1 | 224 | 393 | 2 | 172 | 2.53e-73 | 226 |
| Msa0344030 | MtrunA17_Chr2g0295751 | 66.486 | 185 | 55 | 3 | 1 | 185 | 1 | 178 | 2.21e-71 | 232 |
| Msa0344030 | MtrunA17_Chr2g0296551 | 58.511 | 188 | 75 | 2 | 203 | 389 | 5 | 190 | 2.04e-68 | 214 |
| Msa0344030 | MtrunA17_Chr2g0296211 | 55.941 | 202 | 83 | 3 | 194 | 391 | 167 | 366 | 1.42e-66 | 216 |
| Msa0344030 | MtrunA17_Chr2g0296211 | 40.517 | 116 | 65 | 1 | 27 | 142 | 92 | 203 | 2.52e-19 | 88.6 |
| Msa0344030 | MtrunA17_Chr2g0296701 | 64.375 | 160 | 56 | 1 | 231 | 389 | 3 | 162 | 7.28e-66 | 207 |
| Msa0344030 | MtrunA17_Chr2g0295711 | 55.051 | 198 | 75 | 2 | 6 | 200 | 8 | 194 | 9.10e-63 | 200 |
| Msa0344030 | MtrunA17_Chr2g0296751 | 62.222 | 135 | 50 | 1 | 256 | 389 | 1 | 135 | 4.75e-52 | 171 |
| Msa0344030 | MtrunA17_Chr2g0295721 | 68.103 | 116 | 37 | 0 | 227 | 342 | 1 | 116 | 4.10e-51 | 167 |
| Msa0344030 | MtrunA17_Chr4g0001831 | 31.024 | 332 | 222 | 4 | 40 | 367 | 25 | 353 | 1.79e-44 | 158 |
| Msa0344030 | MtrunA17_Chr2g0286221 | 50.303 | 165 | 79 | 3 | 229 | 392 | 16 | 178 | 1.84e-43 | 149 |
| Msa0344030 | MtrunA17_Chr8g0377781 | 29.552 | 335 | 228 | 3 | 47 | 377 | 37 | 367 | 1.55e-34 | 131 |
| Msa0344030 | MtrunA17_Chr8g0377801 | 27.114 | 343 | 241 | 3 | 47 | 388 | 50 | 384 | 8.29e-34 | 130 |
| Msa0344030 | MtrunA17_Chr2g0296561 | 52.459 | 122 | 54 | 2 | 40 | 161 | 26 | 143 | 1.10e-31 | 117 |
| Msa0344030 | MtrunA17_Chr4g0067131 | 50.617 | 81 | 39 | 1 | 300 | 379 | 1 | 81 | 1.85e-18 | 79.7 |
| Msa0344030 | MtrunA17_Chr4g0067681 | 55.738 | 61 | 27 | 0 | 289 | 349 | 1 | 61 | 9.50e-17 | 74.3 |
| Msa0344030 | MtrunA17_Chr8g0339041 | 22.180 | 266 | 192 | 5 | 97 | 357 | 62 | 317 | 9.35e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344030 | AT5G07900.1 | 34.831 | 356 | 217 | 7 | 36 | 380 | 48 | 399 | 2.38e-64 | 211 |
| Msa0344030 | AT1G21150.3 | 30.645 | 310 | 208 | 3 | 43 | 348 | 10 | 316 | 9.83e-43 | 153 |
| Msa0344030 | AT1G21150.1 | 31.667 | 300 | 198 | 3 | 53 | 348 | 56 | 352 | 2.54e-42 | 153 |
| Msa0344030 | AT1G21150.2 | 31.667 | 300 | 198 | 3 | 53 | 348 | 120 | 416 | 8.72e-42 | 153 |
| Msa0344030 | AT5G64950.1 | 28.155 | 309 | 204 | 5 | 43 | 339 | 26 | 328 | 3.50e-31 | 122 |
| Msa0344030 | AT1G61980.3 | 28.492 | 358 | 205 | 9 | 53 | 368 | 52 | 400 | 2.44e-29 | 118 |
| Msa0344030 | AT1G61980.2 | 28.492 | 358 | 205 | 9 | 53 | 368 | 52 | 400 | 2.44e-29 | 118 |
| Msa0344030 | AT1G61980.1 | 28.492 | 358 | 205 | 9 | 53 | 368 | 52 | 400 | 2.44e-29 | 118 |
| Msa0344030 | AT1G61970.2 | 27.451 | 357 | 208 | 9 | 53 | 367 | 52 | 399 | 2.92e-29 | 118 |
| Msa0344030 | AT1G61970.7 | 27.451 | 357 | 208 | 9 | 53 | 367 | 52 | 399 | 2.92e-29 | 118 |
| Msa0344030 | AT1G61970.6 | 27.451 | 357 | 208 | 9 | 53 | 367 | 52 | 399 | 2.92e-29 | 118 |
| Msa0344030 | AT1G61970.3 | 27.451 | 357 | 208 | 9 | 53 | 367 | 52 | 399 | 2.92e-29 | 118 |
| Msa0344030 | AT1G61970.5 | 27.451 | 357 | 208 | 9 | 53 | 367 | 52 | 399 | 2.92e-29 | 118 |
| Msa0344030 | AT1G61970.4 | 27.451 | 357 | 208 | 9 | 53 | 367 | 52 | 399 | 2.92e-29 | 118 |
| Msa0344030 | AT1G61970.1 | 27.451 | 357 | 208 | 9 | 53 | 367 | 52 | 399 | 2.92e-29 | 118 |
| Msa0344030 | AT1G61990.2 | 28.446 | 341 | 183 | 8 | 54 | 351 | 53 | 375 | 8.14e-29 | 116 |
| Msa0344030 | AT1G61990.1 | 28.446 | 341 | 183 | 8 | 54 | 351 | 53 | 375 | 8.14e-29 | 116 |
| Msa0344030 | AT3G46950.1 | 29.964 | 277 | 177 | 8 | 29 | 299 | 26 | 291 | 1.15e-26 | 111 |
| Msa0344030 | AT1G62120.1 | 26.611 | 357 | 212 | 8 | 30 | 344 | 33 | 381 | 7.12e-26 | 108 |
| Msa0344030 | AT1G62085.1 | 25.377 | 398 | 211 | 11 | 26 | 343 | 23 | 414 | 3.65e-23 | 101 |
| Msa0344030 | AT1G62085.2 | 25.377 | 398 | 211 | 11 | 26 | 343 | 23 | 414 | 3.65e-23 | 101 |
| Msa0344030 | AT1G62010.1 | 26.935 | 323 | 186 | 6 | 66 | 344 | 43 | 359 | 5.43e-23 | 100 |
| Msa0344030 | AT5G23930.1 | 25.840 | 387 | 205 | 10 | 53 | 365 | 55 | 433 | 1.93e-21 | 96.3 |
| Msa0344030 | AT1G61960.1 | 28.235 | 255 | 173 | 4 | 47 | 297 | 46 | 294 | 3.26e-20 | 92.4 |
| Msa0344030 | AT1G62110.1 | 26.374 | 273 | 189 | 5 | 30 | 297 | 30 | 295 | 2.80e-18 | 86.7 |
| Msa0344030 | AT1G62150.1 | 24.206 | 252 | 186 | 3 | 47 | 296 | 52 | 300 | 1.32e-16 | 81.6 |
Find 79 sgRNAs with CRISPR-Local
Find 224 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTACCTCATCAACAATTT+TGG | 0.159722 | 3_1:-2610566 | Msa0344030:CDS |
| TTTCCTGCAACCCTTCTAAA+AGG | 0.220666 | 3_1:-2610391 | Msa0344030:CDS |
| TTAATTTAGTGATGAACTTT+TGG | 0.234643 | 3_1:-2609848 | Msa0344030:CDS |
| GAAATTGGTGGAGGAATTAA+AGG | 0.238950 | 3_1:-2610051 | Msa0344030:CDS |
| GGTGGAGGAATTAAAGGATT+TGG | 0.242361 | 3_1:-2610045 | Msa0344030:CDS |
| ATCAACTTCTTTAGAAACTA+TGG | 0.267482 | 3_1:-2610464 | Msa0344030:CDS |
| GTGGAGGAATTAAAGGATTT+GGG | 0.314616 | 3_1:-2610044 | Msa0344030:CDS |
| AGACCAACCCCACTTCTTAA+AGG | 0.324708 | 3_1:+2609935 | None:intergenic |
| GTTTCTTGATAAGTGTATAA+AGG | 0.325915 | 3_1:-2609652 | Msa0344030:CDS |
| TTAAAAGAATGCTTTGGTTA+AGG | 0.353006 | 3_1:-2610109 | Msa0344030:CDS |
| GACACATGACATGCTGAAAT+TGG | 0.353711 | 3_1:-2610066 | Msa0344030:CDS |
| TAGCCATGGTTCCTTTGAAA+TGG | 0.395647 | 3_1:+2610415 | None:intergenic |
| TTTCTTGATAAGTGTATAAA+GGG | 0.396797 | 3_1:-2609651 | Msa0344030:CDS |
| ATGTTCTACAAGCATTTAGA+AGG | 0.400394 | 3_1:-2609905 | Msa0344030:CDS |
| AGAGGGTTAGGGTTAGGGTT+TGG | 0.404880 | 3_1:+2610671 | None:intergenic |
| TGCGTATGTGGAGCAAAGTC+TGG | 0.409089 | 3_1:+2610523 | None:intergenic |
| TTGCAATATCTTCTGAAGAA+AGG | 0.412458 | 3_1:-2609729 | Msa0344030:CDS |
| GTCAGAGGTAGAAGCACCTT+TGG | 0.417863 | 3_1:+2610340 | None:intergenic |
| TGAAATGGTAAGACGTAGTT+GGG | 0.418042 | 3_1:+2610430 | None:intergenic |
| TAAGTGTATAAAGGGTATTA+AGG | 0.419835 | 3_1:-2609643 | Msa0344030:CDS |
| AGAGAAAATGTTGGTGATGA+TGG | 0.427085 | 3_1:+2610632 | None:intergenic |
| GAATCTATAAATCAATTGAT+AGG | 0.434987 | 3_1:+2610250 | None:intergenic |
| ATTCGCAATCCATCTTTCTT+CGG | 0.435209 | 3_1:-2610194 | Msa0344030:CDS |
| CAAACATTAAAAGAATGCTT+TGG | 0.436839 | 3_1:-2610115 | Msa0344030:CDS |
| CTTAAAACTAATTGCGTATG+TGG | 0.438575 | 3_1:+2610511 | None:intergenic |
| TTATCTATTAAAGTTGTATG+AGG | 0.446208 | 3_1:-2609613 | Msa0344030:CDS |
| TTGGGTCAATCAGTTAGGTT+GGG | 0.447898 | 3_1:-2609829 | Msa0344030:CDS |
| TTTCTTTAAGTTTCGAAAAG+AGG | 0.455763 | 3_1:-2609773 | Msa0344030:CDS |
| TATAAATCAATTGATAGGCT+TGG | 0.456794 | 3_1:+2610255 | None:intergenic |
| AAGAAGTTGATAACAGAGTC+AGG | 0.461266 | 3_1:+2610476 | None:intergenic |
| TTGAAATGGTAAGACGTAGT+TGG | 0.462482 | 3_1:+2610429 | None:intergenic |
| TTTGGGTCAATCAGTTAGGT+TGG | 0.464253 | 3_1:-2609830 | Msa0344030:CDS |
| AATGCTTTGGTTAAGGAGTC+GGG | 0.471203 | 3_1:-2610102 | Msa0344030:CDS |
| TTCCTGCAACCCTTCTAAAA+GGG | 0.482738 | 3_1:-2610390 | Msa0344030:CDS |
| GTTTGAGTCGGCCACTCCAT+TGG | 0.486888 | 3_1:+2610133 | None:intergenic |
| GAATGCTTTGGTTAAGGAGT+CGG | 0.487572 | 3_1:-2610103 | Msa0344030:CDS |
| ATCTGTAAGGAAAACATTGT+GGG | 0.488825 | 3_1:-2609973 | Msa0344030:CDS |
| TTCTTTAAGTTTCGAAAAGA+GGG | 0.495393 | 3_1:-2609772 | Msa0344030:CDS |
| AAAGTCTGGAAGCAGATTGT+GGG | 0.509506 | 3_1:+2610537 | None:intergenic |
| CGAGCGTCTCCGAAGAAAGA+TGG | 0.514763 | 3_1:+2610185 | None:intergenic |
| TGCATGCCAAACTATCTGTA+AGG | 0.519763 | 3_1:-2609986 | Msa0344030:CDS |
| CAAAGTCTGGAAGCAGATTG+TGG | 0.519859 | 3_1:+2610536 | None:intergenic |
| AGGGTTTGGTGAGAAAGTTA+AGG | 0.520843 | 3_1:+2610685 | None:intergenic |
| TCGAAAAGAGGGTCCTTCCA+AGG | 0.522254 | 3_1:-2609761 | Msa0344030:CDS |
| GGTTGAATCTGAAGAGTTGG+TGG | 0.537307 | 3_1:+2610601 | None:intergenic |
| ACTACGTCTTACCATTTCAA+AGG | 0.541064 | 3_1:-2610426 | Msa0344030:CDS |
| ATTAGATTGCTGATTGCCAA+TGG | 0.546889 | 3_1:-2610149 | Msa0344030:CDS |
| AAACTGATGGTCCTTTGGCA+AGG | 0.547751 | 3_1:+2609796 | None:intergenic |
| AGAGGTTGAATCTGAAGAGT+TGG | 0.550770 | 3_1:+2610598 | None:intergenic |
| GAGGTAGGAGACTGCAAAAG+AGG | 0.555968 | 3_1:+2610580 | None:intergenic |
| AGTCGATGCCTTTAAGAAGT+GGG | 0.559365 | 3_1:-2609943 | Msa0344030:CDS |
| GATGCACTTGCCCTTGCCAA+AGG | 0.563336 | 3_1:-2609807 | Msa0344030:CDS |
| TATTGCAATACAGAGGCCCT+TGG | 0.565124 | 3_1:+2609744 | None:intergenic |
| GAGAAAATGTTGGTGATGAT+GGG | 0.566239 | 3_1:+2610633 | None:intergenic |
| AACTGATGGTCCTTTGGCAA+GGG | 0.571808 | 3_1:+2609797 | None:intergenic |
| TAGATTCTTGCAATCAGACA+AGG | 0.576536 | 3_1:-2610234 | Msa0344030:CDS |
| CGAAAAGAGGGTCCTTCCAA+GGG | 0.576545 | 3_1:-2609760 | Msa0344030:CDS |
| AAGTCGATGCCTTTAAGAAG+TGG | 0.577016 | 3_1:-2609944 | Msa0344030:CDS |
| TATCTGTAAGGAAAACATTG+TGG | 0.577111 | 3_1:-2609974 | Msa0344030:CDS |
| GCCAAAATTGTTGATGAGGT+AGG | 0.577466 | 3_1:+2610565 | None:intergenic |
| AAGGCAACCACATTGTATGT+TGG | 0.594814 | 3_1:-2609886 | Msa0344030:CDS |
| GCAATACAGAGGCCCTTGGA+AGG | 0.596897 | 3_1:+2609748 | None:intergenic |
| AAGCTCTATGACTATGACGA+TGG | 0.597823 | 3_1:+2610723 | None:intergenic |
| AAAAGCCAAAATTGTTGATG+AGG | 0.598384 | 3_1:+2610561 | None:intergenic |
| ATGCCTTTAAGAAGTGGGGT+TGG | 0.598873 | 3_1:-2609938 | Msa0344030:CDS |
| GTCGATGCCTTTAAGAAGTG+GGG | 0.602513 | 3_1:-2609942 | Msa0344030:CDS |
| GGCATGCAATGCTACACCAA+AGG | 0.603475 | 3_1:+2610001 | None:intergenic |
| GAAAATGTTAACAATGTCAG+AGG | 0.609432 | 3_1:+2610325 | None:intergenic |
| ACATGACATGCTGAAATTGG+TGG | 0.610610 | 3_1:-2610063 | Msa0344030:CDS |
| TTTCTTCGGAGACGCTCGTG+TGG | 0.619956 | 3_1:-2610180 | Msa0344030:CDS |
| TGACATGCTGAAATTGGTGG+AGG | 0.631062 | 3_1:-2610060 | Msa0344030:CDS |
| ACTCAATCTTGCTTACACCA+TGG | 0.635583 | 3_1:-2609586 | Msa0344030:CDS |
| AATTTCAGCATGTCATGTGT+CGG | 0.639746 | 3_1:+2610068 | None:intergenic |
| GGGTTGCAGGAAAGTAGCCA+TGG | 0.641042 | 3_1:+2610401 | None:intergenic |
| TTACCATTTCAAAGGAACCA+TGG | 0.651356 | 3_1:-2610418 | Msa0344030:CDS |
| CAGAAGATATTGCAATACAG+AGG | 0.669772 | 3_1:+2609737 | None:intergenic |
| AAGTCTGGAAGCAGATTGTG+GGG | 0.672466 | 3_1:+2610538 | None:intergenic |
| ATTGCTGATTGCCAATGGAG+TGG | 0.672936 | 3_1:-2610144 | Msa0344030:CDS |
| ATGGATACCAACATACAATG+TGG | 0.711327 | 3_1:+2609879 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CACTAAATTAATTTTATCAA+TGG | + | chr3_1:2610443-2610462 | None:intergenic | 15.0% |
| !!! | CACTAAATTAATTTTATCAA+TGG | + | chr3_1:2610443-2610462 | None:intergenic | 15.0% |
| !!! | CTTGGATAATTTTATTATTG+AGG | + | chr3_1:2610030-2610049 | None:intergenic | 20.0% |
| !! | GAATCTATAAATCAATTGAT+AGG | + | chr3_1:2610053-2610072 | None:intergenic | 20.0% |
| !!! | TTAATTTAGTGATGAACTTT+TGG | - | chr3_1:2610452-2610471 | Msa0344030:CDS | 20.0% |
| !!! | TAATTTAGTGATGAACTTTT+GGG | - | chr3_1:2610453-2610472 | Msa0344030:CDS | 20.0% |
| !! | AAACTTAAAGAAAAAACTGA+TGG | + | chr3_1:2610520-2610539 | None:intergenic | 20.0% |
| !! | TTTCTTGATAAGTGTATAAA+GGG | - | chr3_1:2610649-2610668 | Msa0344030:CDS | 20.0% |
| !! | TTATCTATTAAAGTTGTATG+AGG | - | chr3_1:2610687-2610706 | Msa0344030:CDS | 20.0% |
| !!! | CTTGGATAATTTTATTATTG+AGG | + | chr3_1:2610030-2610049 | None:intergenic | 20.0% |
| !! | GAATCTATAAATCAATTGAT+AGG | + | chr3_1:2610053-2610072 | None:intergenic | 20.0% |
| !!! | TTAATTTAGTGATGAACTTT+TGG | - | chr3_1:2610452-2610471 | Msa0344030:CDS | 20.0% |
| !!! | TAATTTAGTGATGAACTTTT+GGG | - | chr3_1:2610453-2610472 | Msa0344030:CDS | 20.0% |
| !! | AAACTTAAAGAAAAAACTGA+TGG | + | chr3_1:2610520-2610539 | None:intergenic | 20.0% |
| !! | TTTCTTGATAAGTGTATAAA+GGG | - | chr3_1:2610649-2610668 | Msa0344030:CDS | 20.0% |
| !! | TTATCTATTAAAGTTGTATG+AGG | - | chr3_1:2610687-2610706 | Msa0344030:CDS | 20.0% |
| !! | ATCAACTTCTTTAGAAACTA+TGG | - | chr3_1:2609836-2609855 | Msa0344030:CDS | 25.0% |
| ! | GAGAGAAAAAATTGAAACTT+TGG | + | chr3_1:2609941-2609960 | None:intergenic | 25.0% |
| !!! | TTTCAATTTTTTCTCTCCAA+AGG | - | chr3_1:2609944-2609963 | Msa0344030:CDS | 25.0% |
| ! | TATAAATCAATTGATAGGCT+TGG | + | chr3_1:2610048-2610067 | None:intergenic | 25.0% |
| !! | CATTCTTTTAATGTTTGAGT+CGG | + | chr3_1:2610182-2610201 | None:intergenic | 25.0% |
| ! | CAAACATTAAAAGAATGCTT+TGG | - | chr3_1:2610185-2610204 | Msa0344030:CDS | 25.0% |
| ! | TTAAAAGAATGCTTTGGTTA+AGG | - | chr3_1:2610191-2610210 | Msa0344030:CDS | 25.0% |
| !! | TTTCTTTAAGTTTCGAAAAG+AGG | - | chr3_1:2610527-2610546 | Msa0344030:CDS | 25.0% |
| !! | TTCTTTAAGTTTCGAAAAGA+GGG | - | chr3_1:2610528-2610547 | Msa0344030:CDS | 25.0% |
| ! | GTTTCTTGATAAGTGTATAA+AGG | - | chr3_1:2610648-2610667 | Msa0344030:CDS | 25.0% |
| !!! | TAAGTGTATAAAGGGTATTA+AGG | - | chr3_1:2610657-2610676 | Msa0344030:CDS | 25.0% |
| !! | ATCAACTTCTTTAGAAACTA+TGG | - | chr3_1:2609836-2609855 | Msa0344030:CDS | 25.0% |
| ! | GAGAGAAAAAATTGAAACTT+TGG | + | chr3_1:2609941-2609960 | None:intergenic | 25.0% |
| !!! | TTTCAATTTTTTCTCTCCAA+AGG | - | chr3_1:2609944-2609963 | Msa0344030:CDS | 25.0% |
| ! | TATAAATCAATTGATAGGCT+TGG | + | chr3_1:2610048-2610067 | None:intergenic | 25.0% |
| !! | CATTCTTTTAATGTTTGAGT+CGG | + | chr3_1:2610182-2610201 | None:intergenic | 25.0% |
| ! | CAAACATTAAAAGAATGCTT+TGG | - | chr3_1:2610185-2610204 | Msa0344030:CDS | 25.0% |
| ! | TTAAAAGAATGCTTTGGTTA+AGG | - | chr3_1:2610191-2610210 | Msa0344030:CDS | 25.0% |
| !! | TTTCTTTAAGTTTCGAAAAG+AGG | - | chr3_1:2610527-2610546 | Msa0344030:CDS | 25.0% |
| !! | TTCTTTAAGTTTCGAAAAGA+GGG | - | chr3_1:2610528-2610547 | Msa0344030:CDS | 25.0% |
| ! | GTTTCTTGATAAGTGTATAA+AGG | - | chr3_1:2610648-2610667 | Msa0344030:CDS | 25.0% |
| !!! | TAAGTGTATAAAGGGTATTA+AGG | - | chr3_1:2610657-2610676 | Msa0344030:CDS | 25.0% |
| GGTAATAACGTTGAAAAAGA+GGG | + | chr3_1:2609649-2609668 | None:intergenic | 30.0% | |
| GAAAAATGGAGAGAAAATGT+TGG | + | chr3_1:2609680-2609699 | None:intergenic | 30.0% | |
| AAAAGCCAAAATTGTTGATG+AGG | + | chr3_1:2609742-2609761 | None:intergenic | 30.0% | |
| CTTAAAACTAATTGCGTATG+TGG | + | chr3_1:2609792-2609811 | None:intergenic | 30.0% | |
| GAAAATGTTAACAATGTCAG+AGG | + | chr3_1:2609978-2609997 | None:intergenic | 30.0% | |
| !! | TATTATTGAGGCTTGTTTTC+AGG | + | chr3_1:2610018-2610037 | None:intergenic | 30.0% |
| ! | TGTTTTCCTTACAGATAGTT+TGG | + | chr3_1:2610323-2610342 | None:intergenic | 30.0% |
| TATCTGTAAGGAAAACATTG+TGG | - | chr3_1:2610326-2610345 | Msa0344030:CDS | 30.0% | |
| ATCTGTAAGGAAAACATTGT+GGG | - | chr3_1:2610327-2610346 | Msa0344030:CDS | 30.0% | |
| ATGTTCTACAAGCATTTAGA+AGG | - | chr3_1:2610395-2610414 | Msa0344030:CDS | 30.0% | |
| ! | TTGCAATATCTTCTGAAGAA+AGG | - | chr3_1:2610571-2610590 | Msa0344030:CDS | 30.0% |
| ! | TTATCAAGAAACAGCTTTTC+AGG | + | chr3_1:2610640-2610659 | None:intergenic | 30.0% |
| GGTAATAACGTTGAAAAAGA+GGG | + | chr3_1:2609649-2609668 | None:intergenic | 30.0% | |
| GAAAAATGGAGAGAAAATGT+TGG | + | chr3_1:2609680-2609699 | None:intergenic | 30.0% | |
| AAAAGCCAAAATTGTTGATG+AGG | + | chr3_1:2609742-2609761 | None:intergenic | 30.0% | |
| CTTAAAACTAATTGCGTATG+TGG | + | chr3_1:2609792-2609811 | None:intergenic | 30.0% | |
| GAAAATGTTAACAATGTCAG+AGG | + | chr3_1:2609978-2609997 | None:intergenic | 30.0% | |
| !! | TATTATTGAGGCTTGTTTTC+AGG | + | chr3_1:2610018-2610037 | None:intergenic | 30.0% |
| ! | TGTTTTCCTTACAGATAGTT+TGG | + | chr3_1:2610323-2610342 | None:intergenic | 30.0% |
| TATCTGTAAGGAAAACATTG+TGG | - | chr3_1:2610326-2610345 | Msa0344030:CDS | 30.0% | |
| ATCTGTAAGGAAAACATTGT+GGG | - | chr3_1:2610327-2610346 | Msa0344030:CDS | 30.0% | |
| ATGTTCTACAAGCATTTAGA+AGG | - | chr3_1:2610395-2610414 | Msa0344030:CDS | 30.0% | |
| ! | TTGCAATATCTTCTGAAGAA+AGG | - | chr3_1:2610571-2610590 | Msa0344030:CDS | 30.0% |
| ! | TTATCAAGAAACAGCTTTTC+AGG | + | chr3_1:2610640-2610659 | None:intergenic | 30.0% |
| ! | TAGAGCTTTTCTCTATCTCA+AGG | - | chr3_1:2609592-2609611 | Msa0344030:CDS | 35.0% |
| AACGTTGAAAAAGAGGGTTA+GGG | + | chr3_1:2609643-2609662 | None:intergenic | 35.0% | |
| TAACGTTGAAAAAGAGGGTT+AGG | + | chr3_1:2609644-2609663 | None:intergenic | 35.0% | |
| GGGTAATAACGTTGAAAAAG+AGG | + | chr3_1:2609650-2609669 | None:intergenic | 35.0% | |
| !! | GAGAAAATGTTGGTGATGAT+GGG | + | chr3_1:2609670-2609689 | None:intergenic | 35.0% |
| !! | AGAGAAAATGTTGGTGATGA+TGG | + | chr3_1:2609671-2609690 | None:intergenic | 35.0% |
| ! | TCCTACCTCATCAACAATTT+TGG | - | chr3_1:2609734-2609753 | Msa0344030:CDS | 35.0% |
| ! | GATAACAGAGTCAGGTTTTT+GGG | + | chr3_1:2609819-2609838 | None:intergenic | 35.0% |
| ! | TGATAACAGAGTCAGGTTTT+TGG | + | chr3_1:2609820-2609839 | None:intergenic | 35.0% |
| !! | AAGAAGTTGATAACAGAGTC+AGG | + | chr3_1:2609827-2609846 | None:intergenic | 35.0% |
| TGAAATGGTAAGACGTAGTT+GGG | + | chr3_1:2609873-2609892 | None:intergenic | 35.0% | |
| TTGAAATGGTAAGACGTAGT+TGG | + | chr3_1:2609874-2609893 | None:intergenic | 35.0% | |
| ACTACGTCTTACCATTTCAA+AGG | - | chr3_1:2609874-2609893 | Msa0344030:CDS | 35.0% | |
| TTACCATTTCAAAGGAACCA+TGG | - | chr3_1:2609882-2609901 | Msa0344030:CDS | 35.0% | |
| !! | TTGGCAAAACCCTTTTAGAA+GGG | + | chr3_1:2609922-2609941 | None:intergenic | 35.0% |
| ! | TTTGGCAAAACCCTTTTAGA+AGG | + | chr3_1:2609923-2609942 | None:intergenic | 35.0% |
| TAGATTCTTGCAATCAGACA+AGG | - | chr3_1:2610066-2610085 | Msa0344030:CDS | 35.0% | |
| ATTCGCAATCCATCTTTCTT+CGG | - | chr3_1:2610106-2610125 | Msa0344030:CDS | 35.0% | |
| ! | ATTAGATTGCTGATTGCCAA+TGG | - | chr3_1:2610151-2610170 | Msa0344030:CDS | 35.0% |
| AATTTCAGCATGTCATGTGT+CGG | + | chr3_1:2610235-2610254 | None:intergenic | 35.0% | |
| GAAATTGGTGGAGGAATTAA+AGG | - | chr3_1:2610249-2610268 | Msa0344030:CDS | 35.0% | |
| GTGGAGGAATTAAAGGATTT+GGG | - | chr3_1:2610256-2610275 | Msa0344030:CDS | 35.0% | |
| GCTACTTCAAAAACAACCTT+TGG | - | chr3_1:2610283-2610302 | Msa0344030:CDS | 35.0% | |
| ATGGATACCAACATACAATG+TGG | + | chr3_1:2610424-2610443 | None:intergenic | 35.0% | |
| !! | AACTTTTGGGTCAATCAGTT+AGG | - | chr3_1:2610466-2610485 | Msa0344030:CDS | 35.0% |
| AGAAAAAACTGATGGTCCTT+TGG | + | chr3_1:2610512-2610531 | None:intergenic | 35.0% | |
| CAGAAGATATTGCAATACAG+AGG | + | chr3_1:2610566-2610585 | None:intergenic | 35.0% | |
| GAAGAAAGGTTTGCGAAAAA+AGG | - | chr3_1:2610585-2610604 | Msa0344030:CDS | 35.0% | |
| ! | TAGAGCTTTTCTCTATCTCA+AGG | - | chr3_1:2609592-2609611 | Msa0344030:CDS | 35.0% |
| AACGTTGAAAAAGAGGGTTA+GGG | + | chr3_1:2609643-2609662 | None:intergenic | 35.0% | |
| TAACGTTGAAAAAGAGGGTT+AGG | + | chr3_1:2609644-2609663 | None:intergenic | 35.0% | |
| GGGTAATAACGTTGAAAAAG+AGG | + | chr3_1:2609650-2609669 | None:intergenic | 35.0% | |
| !! | GAGAAAATGTTGGTGATGAT+GGG | + | chr3_1:2609670-2609689 | None:intergenic | 35.0% |
| !! | AGAGAAAATGTTGGTGATGA+TGG | + | chr3_1:2609671-2609690 | None:intergenic | 35.0% |
| ! | TCCTACCTCATCAACAATTT+TGG | - | chr3_1:2609734-2609753 | Msa0344030:CDS | 35.0% |
| ! | GATAACAGAGTCAGGTTTTT+GGG | + | chr3_1:2609819-2609838 | None:intergenic | 35.0% |
| ! | TGATAACAGAGTCAGGTTTT+TGG | + | chr3_1:2609820-2609839 | None:intergenic | 35.0% |
| !! | AAGAAGTTGATAACAGAGTC+AGG | + | chr3_1:2609827-2609846 | None:intergenic | 35.0% |
| TGAAATGGTAAGACGTAGTT+GGG | + | chr3_1:2609873-2609892 | None:intergenic | 35.0% | |
| TTGAAATGGTAAGACGTAGT+TGG | + | chr3_1:2609874-2609893 | None:intergenic | 35.0% | |
| ACTACGTCTTACCATTTCAA+AGG | - | chr3_1:2609874-2609893 | Msa0344030:CDS | 35.0% | |
| TTACCATTTCAAAGGAACCA+TGG | - | chr3_1:2609882-2609901 | Msa0344030:CDS | 35.0% | |
| !! | TTGGCAAAACCCTTTTAGAA+GGG | + | chr3_1:2609922-2609941 | None:intergenic | 35.0% |
| ! | TTTGGCAAAACCCTTTTAGA+AGG | + | chr3_1:2609923-2609942 | None:intergenic | 35.0% |
| TAGATTCTTGCAATCAGACA+AGG | - | chr3_1:2610066-2610085 | Msa0344030:CDS | 35.0% | |
| ATTCGCAATCCATCTTTCTT+CGG | - | chr3_1:2610106-2610125 | Msa0344030:CDS | 35.0% | |
| ! | ATTAGATTGCTGATTGCCAA+TGG | - | chr3_1:2610151-2610170 | Msa0344030:CDS | 35.0% |
| AATTTCAGCATGTCATGTGT+CGG | + | chr3_1:2610235-2610254 | None:intergenic | 35.0% | |
| GAAATTGGTGGAGGAATTAA+AGG | - | chr3_1:2610249-2610268 | Msa0344030:CDS | 35.0% | |
| GTGGAGGAATTAAAGGATTT+GGG | - | chr3_1:2610256-2610275 | Msa0344030:CDS | 35.0% | |
| GCTACTTCAAAAACAACCTT+TGG | - | chr3_1:2610283-2610302 | Msa0344030:CDS | 35.0% | |
| ATGGATACCAACATACAATG+TGG | + | chr3_1:2610424-2610443 | None:intergenic | 35.0% | |
| !! | AACTTTTGGGTCAATCAGTT+AGG | - | chr3_1:2610466-2610485 | Msa0344030:CDS | 35.0% |
| AGAAAAAACTGATGGTCCTT+TGG | + | chr3_1:2610512-2610531 | None:intergenic | 35.0% | |
| CAGAAGATATTGCAATACAG+AGG | + | chr3_1:2610566-2610585 | None:intergenic | 35.0% | |
| GAAGAAAGGTTTGCGAAAAA+AGG | - | chr3_1:2610585-2610604 | Msa0344030:CDS | 35.0% | |
| AAGCTCTATGACTATGACGA+TGG | + | chr3_1:2609580-2609599 | None:intergenic | 40.0% | |
| !! | AGGGTTTGGTGAGAAAGTTA+AGG | + | chr3_1:2609618-2609637 | None:intergenic | 40.0% |
| GAAAAAGAGGGTTAGGGTTA+GGG | + | chr3_1:2609637-2609656 | None:intergenic | 40.0% | |
| TGAAAAAGAGGGTTAGGGTT+AGG | + | chr3_1:2609638-2609657 | None:intergenic | 40.0% | |
| !! | CTGAAGAGTTGGTGGAAAAA+TGG | + | chr3_1:2609694-2609713 | None:intergenic | 40.0% |
| AGAGGTTGAATCTGAAGAGT+TGG | + | chr3_1:2609705-2609724 | None:intergenic | 40.0% | |
| ! | GCCAAAATTGTTGATGAGGT+AGG | + | chr3_1:2609738-2609757 | None:intergenic | 40.0% |
| AAAGTCTGGAAGCAGATTGT+GGG | + | chr3_1:2609766-2609785 | None:intergenic | 40.0% | |
| ! | TAGCCATGGTTCCTTTGAAA+TGG | + | chr3_1:2609888-2609907 | None:intergenic | 40.0% |
| TTTCCTGCAACCCTTCTAAA+AGG | - | chr3_1:2609909-2609928 | Msa0344030:CDS | 40.0% | |
| ! | TTCCTGCAACCCTTCTAAAA+GGG | - | chr3_1:2609910-2609929 | Msa0344030:CDS | 40.0% |
| !! | AGGCTTGTTTTCAGGATGTA+GGG | + | chr3_1:2610010-2610029 | None:intergenic | 40.0% |
| GAATGCTTTGGTTAAGGAGT+CGG | - | chr3_1:2610197-2610216 | Msa0344030:CDS | 40.0% | |
| AATGCTTTGGTTAAGGAGTC+GGG | - | chr3_1:2610198-2610217 | Msa0344030:CDS | 40.0% | |
| GACACATGACATGCTGAAAT+TGG | - | chr3_1:2610234-2610253 | Msa0344030:CDS | 40.0% | |
| ACATGACATGCTGAAATTGG+TGG | - | chr3_1:2610237-2610256 | Msa0344030:CDS | 40.0% | |
| GGTGGAGGAATTAAAGGATT+TGG | - | chr3_1:2610255-2610274 | Msa0344030:CDS | 40.0% | |
| TGCATGCCAAACTATCTGTA+AGG | - | chr3_1:2610314-2610333 | Msa0344030:CDS | 40.0% | |
| ! | AAGTCGATGCCTTTAAGAAG+TGG | - | chr3_1:2610356-2610375 | Msa0344030:CDS | 40.0% |
| ! | AGTCGATGCCTTTAAGAAGT+GGG | - | chr3_1:2610357-2610376 | Msa0344030:CDS | 40.0% |
| AAGGCAACCACATTGTATGT+TGG | - | chr3_1:2610414-2610433 | Msa0344030:CDS | 40.0% | |
| TTTGGGTCAATCAGTTAGGT+TGG | - | chr3_1:2610470-2610489 | Msa0344030:CDS | 40.0% | |
| TTGGGTCAATCAGTTAGGTT+GGG | - | chr3_1:2610471-2610490 | Msa0344030:CDS | 40.0% | |
| !! | AGCTTTTCAGGCACTACAAA+TGG | + | chr3_1:2610628-2610647 | None:intergenic | 40.0% |
| ACTCAATCTTGCTTACACCA+TGG | - | chr3_1:2610714-2610733 | Msa0344030:CDS | 40.0% | |
| AAGCTCTATGACTATGACGA+TGG | + | chr3_1:2609580-2609599 | None:intergenic | 40.0% | |
| !! | AGGGTTTGGTGAGAAAGTTA+AGG | + | chr3_1:2609618-2609637 | None:intergenic | 40.0% |
| GAAAAAGAGGGTTAGGGTTA+GGG | + | chr3_1:2609637-2609656 | None:intergenic | 40.0% | |
| TGAAAAAGAGGGTTAGGGTT+AGG | + | chr3_1:2609638-2609657 | None:intergenic | 40.0% | |
| !! | CTGAAGAGTTGGTGGAAAAA+TGG | + | chr3_1:2609694-2609713 | None:intergenic | 40.0% |
| AGAGGTTGAATCTGAAGAGT+TGG | + | chr3_1:2609705-2609724 | None:intergenic | 40.0% | |
| ! | GCCAAAATTGTTGATGAGGT+AGG | + | chr3_1:2609738-2609757 | None:intergenic | 40.0% |
| AAAGTCTGGAAGCAGATTGT+GGG | + | chr3_1:2609766-2609785 | None:intergenic | 40.0% | |
| ! | TAGCCATGGTTCCTTTGAAA+TGG | + | chr3_1:2609888-2609907 | None:intergenic | 40.0% |
| TTTCCTGCAACCCTTCTAAA+AGG | - | chr3_1:2609909-2609928 | Msa0344030:CDS | 40.0% | |
| ! | TTCCTGCAACCCTTCTAAAA+GGG | - | chr3_1:2609910-2609929 | Msa0344030:CDS | 40.0% |
| !! | AGGCTTGTTTTCAGGATGTA+GGG | + | chr3_1:2610010-2610029 | None:intergenic | 40.0% |
| GAATGCTTTGGTTAAGGAGT+CGG | - | chr3_1:2610197-2610216 | Msa0344030:CDS | 40.0% | |
| AATGCTTTGGTTAAGGAGTC+GGG | - | chr3_1:2610198-2610217 | Msa0344030:CDS | 40.0% | |
| GACACATGACATGCTGAAAT+TGG | - | chr3_1:2610234-2610253 | Msa0344030:CDS | 40.0% | |
| ACATGACATGCTGAAATTGG+TGG | - | chr3_1:2610237-2610256 | Msa0344030:CDS | 40.0% | |
| GGTGGAGGAATTAAAGGATT+TGG | - | chr3_1:2610255-2610274 | Msa0344030:CDS | 40.0% | |
| TGCATGCCAAACTATCTGTA+AGG | - | chr3_1:2610314-2610333 | Msa0344030:CDS | 40.0% | |
| ! | AAGTCGATGCCTTTAAGAAG+TGG | - | chr3_1:2610356-2610375 | Msa0344030:CDS | 40.0% |
| ! | AGTCGATGCCTTTAAGAAGT+GGG | - | chr3_1:2610357-2610376 | Msa0344030:CDS | 40.0% |
| AAGGCAACCACATTGTATGT+TGG | - | chr3_1:2610414-2610433 | Msa0344030:CDS | 40.0% | |
| TTTGGGTCAATCAGTTAGGT+TGG | - | chr3_1:2610470-2610489 | Msa0344030:CDS | 40.0% | |
| TTGGGTCAATCAGTTAGGTT+GGG | - | chr3_1:2610471-2610490 | Msa0344030:CDS | 40.0% | |
| !! | AGCTTTTCAGGCACTACAAA+TGG | + | chr3_1:2610628-2610647 | None:intergenic | 40.0% |
| ACTCAATCTTGCTTACACCA+TGG | - | chr3_1:2610714-2610733 | Msa0344030:CDS | 40.0% | |
| GGTTGAATCTGAAGAGTTGG+TGG | + | chr3_1:2609702-2609721 | None:intergenic | 45.0% | |
| AAGTCTGGAAGCAGATTGTG+GGG | + | chr3_1:2609765-2609784 | None:intergenic | 45.0% | |
| CAAAGTCTGGAAGCAGATTG+TGG | + | chr3_1:2609767-2609786 | None:intergenic | 45.0% | |
| !! | AACCCTTTTAGAAGGGTTGC+AGG | + | chr3_1:2609915-2609934 | None:intergenic | 45.0% |
| !! | GGCTTGTTTTCAGGATGTAG+GGG | + | chr3_1:2610009-2610028 | None:intergenic | 45.0% |
| !! | GAGGCTTGTTTTCAGGATGT+AGG | + | chr3_1:2610011-2610030 | None:intergenic | 45.0% |
| ! | ATTGCTGATTGCCAATGGAG+TGG | - | chr3_1:2610156-2610175 | Msa0344030:CDS | 45.0% |
| TGACATGCTGAAATTGGTGG+AGG | - | chr3_1:2610240-2610259 | Msa0344030:CDS | 45.0% | |
| ! | GTCGATGCCTTTAAGAAGTG+GGG | - | chr3_1:2610358-2610377 | Msa0344030:CDS | 45.0% |
| ! | ATGCCTTTAAGAAGTGGGGT+TGG | - | chr3_1:2610362-2610381 | Msa0344030:CDS | 45.0% |
| AGACCAACCCCACTTCTTAA+AGG | + | chr3_1:2610368-2610387 | None:intergenic | 45.0% | |
| AACTGATGGTCCTTTGGCAA+GGG | + | chr3_1:2610506-2610525 | None:intergenic | 45.0% | |
| AAACTGATGGTCCTTTGGCA+AGG | + | chr3_1:2610507-2610526 | None:intergenic | 45.0% | |
| TATTGCAATACAGAGGCCCT+TGG | + | chr3_1:2610559-2610578 | None:intergenic | 45.0% | |
| ! | CGATGTGCATGTTTTGTCCA+TGG | + | chr3_1:2610734-2610753 | None:intergenic | 45.0% |
| GGTTGAATCTGAAGAGTTGG+TGG | + | chr3_1:2609702-2609721 | None:intergenic | 45.0% | |
| AAGTCTGGAAGCAGATTGTG+GGG | + | chr3_1:2609765-2609784 | None:intergenic | 45.0% | |
| CAAAGTCTGGAAGCAGATTG+TGG | + | chr3_1:2609767-2609786 | None:intergenic | 45.0% | |
| !! | AACCCTTTTAGAAGGGTTGC+AGG | + | chr3_1:2609915-2609934 | None:intergenic | 45.0% |
| !! | GGCTTGTTTTCAGGATGTAG+GGG | + | chr3_1:2610009-2610028 | None:intergenic | 45.0% |
| !! | GAGGCTTGTTTTCAGGATGT+AGG | + | chr3_1:2610011-2610030 | None:intergenic | 45.0% |
| ! | ATTGCTGATTGCCAATGGAG+TGG | - | chr3_1:2610156-2610175 | Msa0344030:CDS | 45.0% |
| TGACATGCTGAAATTGGTGG+AGG | - | chr3_1:2610240-2610259 | Msa0344030:CDS | 45.0% | |
| ! | GTCGATGCCTTTAAGAAGTG+GGG | - | chr3_1:2610358-2610377 | Msa0344030:CDS | 45.0% |
| ! | ATGCCTTTAAGAAGTGGGGT+TGG | - | chr3_1:2610362-2610381 | Msa0344030:CDS | 45.0% |
| AGACCAACCCCACTTCTTAA+AGG | + | chr3_1:2610368-2610387 | None:intergenic | 45.0% | |
| AACTGATGGTCCTTTGGCAA+GGG | + | chr3_1:2610506-2610525 | None:intergenic | 45.0% | |
| AAACTGATGGTCCTTTGGCA+AGG | + | chr3_1:2610507-2610526 | None:intergenic | 45.0% | |
| TATTGCAATACAGAGGCCCT+TGG | + | chr3_1:2610559-2610578 | None:intergenic | 45.0% | |
| ! | CGATGTGCATGTTTTGTCCA+TGG | + | chr3_1:2610734-2610753 | None:intergenic | 45.0% |
| AGAGGGTTAGGGTTAGGGTT+TGG | + | chr3_1:2609632-2609651 | None:intergenic | 50.0% | |
| GAGGTAGGAGACTGCAAAAG+AGG | + | chr3_1:2609723-2609742 | None:intergenic | 50.0% | |
| TGCGTATGTGGAGCAAAGTC+TGG | + | chr3_1:2609780-2609799 | None:intergenic | 50.0% | |
| !! | GTCAGAGGTAGAAGCACCTT+TGG | + | chr3_1:2609963-2609982 | None:intergenic | 50.0% |
| GGCATGCAATGCTACACCAA+AGG | + | chr3_1:2610302-2610321 | None:intergenic | 50.0% | |
| TCGAAAAGAGGGTCCTTCCA+AGG | - | chr3_1:2610539-2610558 | Msa0344030:CDS | 50.0% | |
| CGAAAAGAGGGTCCTTCCAA+GGG | - | chr3_1:2610540-2610559 | Msa0344030:CDS | 50.0% | |
| AGAGGGTTAGGGTTAGGGTT+TGG | + | chr3_1:2609632-2609651 | None:intergenic | 50.0% | |
| GAGGTAGGAGACTGCAAAAG+AGG | + | chr3_1:2609723-2609742 | None:intergenic | 50.0% | |
| TGCGTATGTGGAGCAAAGTC+TGG | + | chr3_1:2609780-2609799 | None:intergenic | 50.0% | |
| !! | GTCAGAGGTAGAAGCACCTT+TGG | + | chr3_1:2609963-2609982 | None:intergenic | 50.0% |
| GGCATGCAATGCTACACCAA+AGG | + | chr3_1:2610302-2610321 | None:intergenic | 50.0% | |
| TCGAAAAGAGGGTCCTTCCA+AGG | - | chr3_1:2610539-2610558 | Msa0344030:CDS | 50.0% | |
| CGAAAAGAGGGTCCTTCCAA+GGG | - | chr3_1:2610540-2610559 | Msa0344030:CDS | 50.0% | |
| GGGTTGCAGGAAAGTAGCCA+TGG | + | chr3_1:2609902-2609921 | None:intergenic | 55.0% | |
| CGAGCGTCTCCGAAGAAAGA+TGG | + | chr3_1:2610118-2610137 | None:intergenic | 55.0% | |
| TTTCTTCGGAGACGCTCGTG+TGG | - | chr3_1:2610120-2610139 | Msa0344030:CDS | 55.0% | |
| GTTTGAGTCGGCCACTCCAT+TGG | + | chr3_1:2610170-2610189 | None:intergenic | 55.0% | |
| GATGCACTTGCCCTTGCCAA+AGG | - | chr3_1:2610493-2610512 | Msa0344030:CDS | 55.0% | |
| GCAATACAGAGGCCCTTGGA+AGG | + | chr3_1:2610555-2610574 | None:intergenic | 55.0% | |
| GGGTTGCAGGAAAGTAGCCA+TGG | + | chr3_1:2609902-2609921 | None:intergenic | 55.0% | |
| CGAGCGTCTCCGAAGAAAGA+TGG | + | chr3_1:2610118-2610137 | None:intergenic | 55.0% | |
| TTTCTTCGGAGACGCTCGTG+TGG | - | chr3_1:2610120-2610139 | Msa0344030:CDS | 55.0% | |
| GTTTGAGTCGGCCACTCCAT+TGG | + | chr3_1:2610170-2610189 | None:intergenic | 55.0% | |
| GATGCACTTGCCCTTGCCAA+AGG | - | chr3_1:2610493-2610512 | Msa0344030:CDS | 55.0% | |
| GCAATACAGAGGCCCTTGGA+AGG | + | chr3_1:2610555-2610574 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 2609566 | 2610756 | 2609566 | ID=Msa0344030;Name=Msa0344030 |
| chr3_1 | mRNA | 2609566 | 2610756 | 2609566 | ID=Msa0344030-mRNA-1;Parent=Msa0344030;Name=Msa0344030-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|396 |
| chr3_1 | exon | 2609566 | 2610756 | 2609566 | ID=Msa0344030-mRNA-1:exon:828;Parent=Msa0344030-mRNA-1 |
| chr3_1 | CDS | 2609566 | 2610756 | 2609566 | ID=Msa0344030-mRNA-1:cds;Parent=Msa0344030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
