AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0346400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0346400 MtrunA17_Chr3g0077801 86.648 352 47 0 647 998 1 352 0.0 639
Msa0346400 MtrunA17_Chr3g0077801 70.739 352 61 5 168 477 1 352 3.68e-163 483
Msa0346400 MtrunA17_Chr4g0075971 61.341 507 179 5 496 995 103 599 0.0 574
Msa0346400 MtrunA17_Chr4g0075971 54.102 512 168 11 15 474 103 599 2.55e-149 456
Msa0346400 MtrunA17_Chr4g0075971 46.099 141 68 3 17 157 25 157 1.30e-24 110
Msa0346400 MtrunA17_Chr4g0075971 41.611 149 81 2 498 646 25 167 8.78e-24 107
Msa0346400 MtrunA17_Chr3g0077901 73.219 351 94 0 643 993 17 367 0.0 541
Msa0346400 MtrunA17_Chr3g0077901 59.143 350 101 5 165 472 18 367 1.11e-129 397
Msa0346400 MtrunA17_Chr3g0077851 76.737 331 77 0 663 993 1 331 0.0 529
Msa0346400 MtrunA17_Chr3g0077851 61.677 334 80 5 184 472 1 331 5.85e-127 388
Msa0346400 MtrunA17_Chr6g0488101 51.441 451 191 9 570 998 11 455 1.12e-145 441
Msa0346400 MtrunA17_Chr6g0488101 41.253 463 198 13 79 477 3 455 4.16e-100 322
Msa0346400 MtrunA17_Chr6g0488271 51.429 420 184 7 594 998 1 415 1.55e-136 416
Msa0346400 MtrunA17_Chr6g0488271 41.905 420 182 10 115 477 1 415 1.54e-93 303
Msa0346400 MtrunA17_Chr3g0112311 58.056 360 134 4 647 995 1 354 1.84e-129 395
Msa0346400 MtrunA17_Chr3g0112311 48.333 360 127 9 168 474 1 354 1.05e-84 277
Msa0346400 MtrunA17_Chr7g0252101 52.644 435 182 10 570 998 16 432 5.61e-129 397
Msa0346400 MtrunA17_Chr7g0252101 43.567 443 188 12 81 477 6 432 2.38e-89 292
Msa0346400 MtrunA17_Chr7g0243331 58.092 346 141 4 654 998 8 350 2.90e-122 377
Msa0346400 MtrunA17_Chr7g0243331 47.126 348 134 7 175 477 8 350 2.79e-82 270
Msa0346400 MtrunA17_Chr3g0093911 55.618 356 148 5 647 998 1 350 2.02e-120 372
Msa0346400 MtrunA17_Chr3g0093911 45.198 354 146 8 168 477 1 350 6.50e-81 266
Msa0346400 MtrunA17_Chr1g0207351 55.618 356 145 5 651 998 16 366 3.04e-116 361
Msa0346400 MtrunA17_Chr1g0207351 46.328 354 139 8 172 477 16 366 8.74e-81 267
Msa0346400 MtrunA17_Chr6g0452641 57.742 310 119 3 698 998 34 340 2.23e-101 321
Msa0346400 MtrunA17_Chr6g0452641 44.373 311 117 7 219 477 34 340 1.96e-56 198
Msa0346400 MtrunA17_Chr3g0077891 90.909 176 5 2 1 165 1 176 1.89e-100 312
Msa0346400 MtrunA17_Chr3g0077891 82.386 176 18 2 482 644 1 176 3.08e-80 258
Msa0346400 MtrunA17_Chr1g0209051 58.519 270 104 3 732 997 5 270 1.52e-93 298
Msa0346400 MtrunA17_Chr1g0209051 48.889 270 93 7 248 476 5 270 6.43e-64 217
Msa0346400 MtrunA17_Chr3g0077941 88.571 175 8 2 482 644 1 175 6.95e-91 286
Msa0346400 MtrunA17_Chr3g0077941 82.286 175 21 2 1 165 1 175 2.53e-80 258
Msa0346400 MtrunA17_Chr3g0122991 47.975 321 107 4 652 962 5 275 1.57e-89 287
Msa0346400 MtrunA17_Chr3g0122991 39.937 318 95 8 173 441 5 275 5.28e-54 189
Msa0346400 MtrunA17_Chr3g0077881 81.818 176 19 2 482 644 1 176 8.28e-87 276
Msa0346400 MtrunA17_Chr3g0077881 81.250 176 22 2 1 165 1 176 7.41e-85 271
Msa0346400 MtrunA17_Chr3g0123471 55.133 263 112 4 729 990 2 259 3.85e-80 261
Msa0346400 MtrunA17_Chr3g0123471 43.346 263 106 8 245 469 2 259 8.75e-46 165
Msa0346400 MtrunA17_Chr4g0075861 56.204 274 115 3 496 767 103 373 1.69e-78 261
Msa0346400 MtrunA17_Chr4g0075861 54.348 276 114 4 15 283 103 373 4.71e-73 246
Msa0346400 MtrunA17_Chr4g0075861 42.953 149 79 2 498 646 25 167 5.40e-26 111
Msa0346400 MtrunA17_Chr4g0075861 46.099 141 68 3 17 157 25 157 1.83e-25 109
Msa0346400 MtrunA17_Chr7g0243391 52.336 214 100 1 643 856 14 225 1.79e-57 198
Msa0346400 MtrunA17_Chr7g0243391 49.289 211 101 2 165 369 15 225 3.49e-50 177
Msa0346400 MtrunA17_Chr3g0077861 62.874 167 58 2 482 644 1 167 8.57e-55 187
Msa0346400 MtrunA17_Chr3g0077861 60.947 169 60 3 1 165 1 167 1.08e-52 181
Msa0346400 MtrunA17_Chr3g0077911 62.821 156 54 1 482 633 1 156 4.26e-53 182
Msa0346400 MtrunA17_Chr3g0077911 62.025 158 54 2 1 154 1 156 4.41e-52 179
Msa0346400 MtrunA17_Chr3g0077911 46.250 80 39 1 567 646 8 83 1.57e-11 63.5
Msa0346400 MtrunA17_Chr3g0077911 45.000 80 40 1 88 167 8 83 7.24e-11 61.6
Msa0346400 MtrunA17_Chr1g0202841 52.874 174 78 2 828 998 7 179 6.65e-52 180
Msa0346400 MtrunA17_Chr1g0202841 36.782 174 72 4 341 477 7 179 3.62e-22 94.7
Msa0346400 MtrunA17_Chr6g0486591 51.572 159 68 2 849 998 1 159 6.36e-44 156
Msa0346400 MtrunA17_Chr1g0196231 41.564 243 113 7 555 789 145 366 1.33e-42 159
Msa0346400 MtrunA17_Chr1g0196231 39.241 237 124 6 74 305 145 366 6.10e-38 146
Msa0346400 MtrunA17_Chr1g0206951 58.407 113 46 1 650 761 2 114 1.60e-35 131
Msa0346400 MtrunA17_Chr1g0206951 53.982 113 46 2 171 277 2 114 1.87e-30 117
Msa0346400 MtrunA17_Chr1g0187941 51.852 135 62 1 822 953 1 135 1.63e-34 128
Msa0346400 MtrunA17_Chr1g0187941 35.556 135 50 4 335 432 1 135 6.37e-12 64.3
Msa0346400 MtrunA17_Chr1g0205821 45.122 164 82 3 3 163 15 173 9.10e-33 125
Msa0346400 MtrunA17_Chr1g0205821 44.805 154 83 2 484 636 15 167 3.74e-30 117
Msa0346400 MtrunA17_Chr3g0077811 72.289 83 15 1 479 553 3 85 9.18e-30 114
Msa0346400 MtrunA17_Chr3g0077811 75.000 80 12 1 1 72 6 85 2.28e-29 113
Msa0346400 MtrunA17_Chr3g0077811 39.815 108 35 1 567 644 13 120 3.71e-13 67.0
Msa0346400 MtrunA17_Chr3g0077811 38.889 108 36 1 88 165 13 120 4.58e-12 63.9
Msa0346400 MtrunA17_Chr1g0206771 47.518 141 65 2 18 158 33 164 7.73e-29 114
Msa0346400 MtrunA17_Chr1g0206771 47.101 138 66 2 499 636 33 163 6.55e-27 108
Msa0346400 MtrunA17_Chr1g0206771 56.250 64 27 1 89 152 17 79 5.26e-14 71.6
Msa0346400 MtrunA17_Chr1g0209191 55.102 98 40 1 904 997 1 98 2.72e-28 109
Msa0346400 MtrunA17_Chr1g0209191 45.000 80 39 2 402 476 19 98 1.74e-13 67.4
Msa0346400 MtrunA17_Chr1g0205831 39.521 167 80 4 15 181 16 161 3.68e-25 103
Msa0346400 MtrunA17_Chr1g0205831 38.788 165 82 4 496 660 16 161 1.77e-23 98.6
Msa0346400 MtrunA17_Chr6g0459061 26.578 301 213 6 655 953 18 312 4.63e-25 108
Msa0346400 MtrunA17_Chr6g0459061 24.000 225 161 4 176 392 18 240 1.08e-11 67.8
Msa0346400 MtrunA17_Chr7g0238781 42.105 133 75 2 679 811 27 157 2.17e-24 100
Msa0346400 MtrunA17_Chr7g0238781 41.406 128 70 2 200 323 27 153 8.99e-21 90.5
Msa0346400 MtrunA17_Chr1g0196241 65.278 72 24 1 895 965 3 74 1.39e-23 95.9
Msa0346400 MtrunA17_Chr7g0218891 37.415 147 88 2 16 161 116 259 8.29e-23 99.4
Msa0346400 MtrunA17_Chr7g0218891 38.028 142 84 2 16 156 30 168 2.58e-20 92.0
Msa0346400 MtrunA17_Chr7g0218891 37.241 145 89 2 497 640 116 259 4.99e-20 91.3
Msa0346400 MtrunA17_Chr7g0218891 36.943 157 93 3 497 648 30 185 4.29e-18 85.5
Msa0346400 MtrunA17_Chr7g0218891 46.667 60 32 0 16 75 202 261 3.54e-11 65.1
Msa0346400 MtrunA17_Chr7g0218891 40.278 72 43 0 497 568 202 273 7.82e-11 63.9
Msa0346400 MtrunA17_Chr8g0364231 42.138 159 77 5 483 630 36 190 1.05e-20 99.0
Msa0346400 MtrunA17_Chr8g0364231 40.764 157 84 3 2 151 36 190 2.05e-20 97.8
Msa0346400 MtrunA17_Chr8g0364231 39.259 135 63 2 82 216 36 151 6.80e-19 92.8
Msa0346400 MtrunA17_Chr8g0364231 38.168 131 62 2 565 695 40 151 1.14e-16 85.5
Msa0346400 MtrunA17_Chr6g0452001 38.750 160 83 4 2 151 57 211 6.76e-19 92.8
Msa0346400 MtrunA17_Chr6g0452001 38.750 160 81 4 483 630 57 211 5.20e-18 90.1
Msa0346400 MtrunA17_Chr6g0452001 52.632 76 35 1 82 157 57 131 6.05e-16 83.2
Msa0346400 MtrunA17_Chr6g0452001 48.611 72 36 1 565 636 61 131 1.75e-12 72.0
Msa0346400 MtrunA17_Chr5g0415031 37.654 162 84 4 2 152 37 192 9.64e-19 92.4
Msa0346400 MtrunA17_Chr5g0415031 56.579 76 32 1 86 161 41 115 2.76e-18 90.9
Msa0346400 MtrunA17_Chr5g0415031 37.267 161 84 4 483 631 37 192 7.47e-18 89.4
Msa0346400 MtrunA17_Chr5g0415031 54.167 72 32 1 565 636 41 111 3.90e-15 80.5
Msa0346400 MtrunA17_Chr6g0452021 36.306 157 89 3 2 151 37 189 2.94e-18 89.0
Msa0346400 MtrunA17_Chr6g0452021 38.750 160 79 5 483 630 37 189 9.09e-18 87.8
Msa0346400 MtrunA17_Chr6g0452021 36.641 131 62 3 86 216 41 150 9.73e-15 78.2
Msa0346400 MtrunA17_Chr6g0452021 34.351 131 65 3 565 695 41 150 6.91e-12 68.9
Msa0346400 MtrunA17_Chr1g0205811 60.870 69 22 1 15 83 28 91 7.91e-18 80.5
Msa0346400 MtrunA17_Chr1g0205811 48.889 90 37 1 487 567 10 99 1.53e-17 79.7
Msa0346400 MtrunA17_Chr1g0205811 47.500 80 41 1 88 167 14 92 2.84e-13 67.4
Msa0346400 MtrunA17_Chr1g0205811 43.750 80 44 1 567 646 14 92 2.79e-11 62.0
Msa0346400 MtrunA17_Chr1g0209061 41.322 121 47 5 567 686 10 107 8.19e-18 80.1
Msa0346400 MtrunA17_Chr1g0209061 39.167 120 51 5 88 207 10 107 1.33e-15 73.6
Msa0346400 MtrunA17_Chr1g0205801 49.495 99 35 3 6 97 10 100 6.22e-17 77.8
Msa0346400 MtrunA17_Chr1g0205801 46.392 97 39 2 487 576 10 100 4.01e-16 75.5
Msa0346400 MtrunA17_Chr1g0206781 51.282 78 37 1 86 163 9 85 1.29e-16 77.0
Msa0346400 MtrunA17_Chr1g0206781 48.148 81 41 1 565 645 9 88 4.19e-14 69.7
Msa0346400 MtrunA17_Chr1g0206781 42.857 105 34 2 499 603 28 106 1.83e-13 68.2
Msa0346400 MtrunA17_Chr1g0206781 41.121 107 35 2 18 124 28 106 6.17e-13 66.6
Msa0346400 MtrunA17_Chr1g0209201 38.760 129 66 3 11 139 27 142 2.78e-16 77.0
Msa0346400 MtrunA17_Chr1g0209201 37.600 125 69 2 494 618 27 142 4.21e-15 73.6
Msa0346400 MtrunA17_Chr1g0209201 43.750 80 43 1 88 167 16 93 5.24e-14 70.5
Msa0346400 MtrunA17_Chr1g0209201 37.778 90 54 1 557 646 6 93 7.44e-12 64.3
Msa0346400 MtrunA17_Chr8g0364021 46.154 91 46 2 88 178 44 131 3.49e-14 73.6
Msa0346400 MtrunA17_Chr8g0364021 43.956 91 48 2 567 657 44 131 5.86e-13 69.7
Msa0346400 MtrunA17_Chr8g0364021 46.053 76 34 1 2 70 38 113 3.51e-11 64.7
Msa0346400 MtrunA17_Chr8g0364021 53.571 56 26 0 496 551 58 113 5.76e-11 63.9
Msa0346400 MtrunA17_Chr1g0205861 37.500 104 64 1 87 190 15 117 6.11e-13 66.6
Msa0346400 MtrunA17_Chr1g0205861 36.441 118 73 2 553 669 1 117 2.64e-11 62.0
Msa0346400 MtrunA17_Chr2g0328701 43.333 90 46 2 498 587 42 126 6.39e-13 66.6
Msa0346400 MtrunA17_Chr2g0328701 44.565 92 43 3 17 108 42 125 3.29e-12 64.7
Msa0346400 MtrunA17_Chr2g0328701 47.826 69 32 1 88 156 29 93 3.08e-11 62.0
Msa0346400 MtrunA17_Chr7g0218911 48.485 66 33 1 92 157 2 66 5.90e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0346400 AT3G01320.1 38.857 175 95 4 2 168 51 221 1.85e-19 95.1
Msa0346400 AT3G01320.1 40.645 155 84 2 483 630 51 204 8.18e-19 93.2
Msa0346400 AT3G01320.1 50.000 72 35 1 565 636 55 125 5.01e-13 74.3
Msa0346400 AT3G01320.2 38.857 175 95 4 2 168 51 221 2.14e-19 95.1
Msa0346400 AT3G01320.2 40.645 155 84 2 483 630 51 204 9.10e-19 92.8
Msa0346400 AT3G01320.2 50.000 72 35 1 565 636 55 125 5.58e-13 73.9
Msa0346400 AT1G70030.1 36.943 157 88 3 2 151 5 157 3.83e-19 85.9
Msa0346400 AT1G70030.1 36.774 155 89 2 483 630 5 157 1.58e-18 84.3
Msa0346400 AT1G70030.1 48.649 74 37 1 86 159 9 81 5.28e-12 65.5
Msa0346400 AT1G24250.1 30.435 161 93 2 19 161 33 192 2.51e-18 86.3
Msa0346400 AT1G24250.1 28.492 179 103 4 473 629 6 181 5.10e-16 79.3
Msa0346400 AT5G15020.1 38.012 171 89 4 2 162 46 209 2.60e-18 91.7
Msa0346400 AT5G15020.1 36.047 172 101 3 483 647 46 215 4.25e-17 87.4
Msa0346400 AT5G15020.2 38.012 171 89 4 2 162 46 209 3.09e-18 91.3
Msa0346400 AT5G15020.2 36.047 172 101 3 483 647 46 215 5.33e-17 87.0
Msa0346400 AT1G24230.1 33.333 153 85 2 11 163 25 160 1.18e-17 84.0
Msa0346400 AT1G24230.1 33.553 152 84 3 492 642 25 160 3.85e-17 82.8
Msa0346400 AT1G24230.1 29.921 127 86 1 500 626 104 227 2.45e-12 68.6
Msa0346400 AT1G70060.2 36.943 157 91 2 2 151 8 163 1.20e-17 89.4
Msa0346400 AT1G70060.2 56.579 76 32 1 82 157 8 82 4.98e-17 87.4
Msa0346400 AT1G70060.2 38.125 160 83 5 483 630 8 163 6.26e-17 87.0
Msa0346400 AT1G70060.2 51.389 72 34 1 565 636 12 82 5.08e-13 74.3
Msa0346400 AT1G70060.1 36.943 157 91 2 2 151 8 163 1.20e-17 89.4
Msa0346400 AT1G70060.1 56.579 76 32 1 82 157 8 82 4.98e-17 87.4
Msa0346400 AT1G70060.1 38.125 160 83 5 483 630 8 163 6.26e-17 87.0
Msa0346400 AT1G70060.1 51.389 72 34 1 565 636 12 82 5.08e-13 74.3
Msa0346400 AT1G24190.2 36.538 156 90 4 483 630 8 162 8.22e-17 86.7
Msa0346400 AT1G24190.2 55.263 76 33 1 82 157 8 82 1.29e-16 85.9
Msa0346400 AT1G24190.2 35.032 157 93 3 2 151 8 162 2.38e-16 85.1
Msa0346400 AT1G24190.2 44.578 83 38 2 565 640 12 93 1.52e-12 72.8
Msa0346400 AT1G24190.1 36.538 156 90 4 483 630 8 162 8.66e-17 86.7
Msa0346400 AT1G24190.1 55.263 76 33 1 82 157 8 82 1.26e-16 85.9
Msa0346400 AT1G24190.1 35.032 157 93 3 2 151 8 162 2.53e-16 85.1
Msa0346400 AT1G24190.1 44.578 83 38 2 565 640 12 93 1.47e-12 72.8
Msa0346400 AT1G24190.3 36.538 156 90 4 483 630 8 162 8.91e-17 86.3
Msa0346400 AT1G24190.3 55.263 76 33 1 82 157 8 82 1.15e-16 86.3
Msa0346400 AT1G24190.3 35.032 157 93 3 2 151 8 162 2.55e-16 85.1
Msa0346400 AT1G24190.3 44.578 83 38 2 565 640 12 93 1.51e-12 72.8
Msa0346400 AT1G10450.3 37.762 143 87 2 498 640 100 240 1.32e-16 85.9
Msa0346400 AT1G10450.3 37.681 138 82 2 14 151 97 230 4.43e-16 84.0
Msa0346400 AT1G10450.3 52.055 73 34 1 85 157 81 152 2.90e-15 81.3
Msa0346400 AT1G10450.3 43.158 95 46 2 560 647 77 170 1.26e-13 76.3
Msa0346400 AT1G10450.2 37.762 143 87 2 498 640 49 189 1.65e-16 85.5
Msa0346400 AT1G10450.2 38.129 139 80 3 14 151 46 179 5.33e-16 84.0
Msa0346400 AT1G10450.2 52.055 73 34 1 85 157 30 101 2.78e-15 81.6
Msa0346400 AT1G10450.2 43.158 95 46 2 560 647 26 119 1.22e-13 76.3
Msa0346400 AT1G10450.1 37.762 143 87 2 498 640 49 189 1.65e-16 85.5
Msa0346400 AT1G10450.1 38.129 139 80 3 14 151 46 179 5.33e-16 84.0
Msa0346400 AT1G10450.1 52.055 73 34 1 85 157 30 101 2.78e-15 81.6
Msa0346400 AT1G10450.1 43.158 95 46 2 560 647 26 119 1.22e-13 76.3
Msa0346400 AT1G23810.1 30.061 163 104 3 8 161 20 181 2.68e-16 80.1
Msa0346400 AT1G23810.1 29.605 152 95 3 489 629 20 170 6.36e-14 73.2
Msa0346400 AT5G15025.1 54.167 72 32 1 86 157 45 115 3.35e-16 76.3
Msa0346400 AT5G15025.1 54.167 72 32 1 565 636 45 115 3.13e-15 73.6
Msa0346400 AT1G59890.2 54.286 70 31 1 88 157 45 113 1.93e-15 82.0
Msa0346400 AT1G59890.2 36.806 144 86 3 17 160 61 199 8.68e-15 79.7
Msa0346400 AT1G59890.2 54.286 70 31 1 567 636 45 113 2.27e-14 78.6
Msa0346400 AT1G59890.2 36.765 136 78 3 498 630 61 191 5.04e-14 77.4
Msa0346400 AT1G59890.3 54.286 70 31 1 88 157 45 113 1.97e-15 82.0
Msa0346400 AT1G59890.3 36.806 144 86 3 17 160 61 199 9.10e-15 79.7
Msa0346400 AT1G59890.3 54.286 70 31 1 567 636 45 113 2.19e-14 78.6
Msa0346400 AT1G59890.3 36.765 136 78 3 498 630 61 191 5.20e-14 77.4
Msa0346400 AT1G59890.1 54.286 70 31 1 88 157 45 113 2.01e-15 82.0
Msa0346400 AT1G59890.1 36.806 144 86 3 17 160 61 199 8.96e-15 79.7
Msa0346400 AT1G59890.1 54.286 70 31 1 567 636 45 113 2.21e-14 78.6
Msa0346400 AT1G59890.1 36.765 136 78 3 498 630 61 191 5.08e-14 77.4
Msa0346400 AT1G59890.4 54.286 70 31 1 88 157 45 113 2.10e-15 82.0
Msa0346400 AT1G59890.4 36.806 144 86 3 17 160 61 199 9.24e-15 79.7
Msa0346400 AT1G59890.4 54.286 70 31 1 567 636 45 113 2.46e-14 78.6
Msa0346400 AT1G59890.4 36.765 136 78 3 498 630 61 191 5.80e-14 77.0
Msa0346400 AT1G24200.1 34.559 136 84 2 16 151 29 159 5.07e-14 72.4
Msa0346400 AT1G24200.1 45.652 92 43 2 86 171 12 102 6.49e-14 72.0
Msa0346400 AT1G24200.1 35.075 134 84 2 497 630 29 159 1.47e-13 70.9
Msa0346400 AT1G24200.1 45.745 94 40 3 565 650 12 102 1.51e-12 68.2
Msa0346400 AT1G27260.1 34.074 135 85 3 19 150 21 154 1.51e-13 71.6
Msa0346400 AT1G27260.1 32.847 137 82 3 500 629 21 154 4.11e-12 67.4
Msa0346400 AT1G27220.1 43.750 80 44 1 88 167 14 92 1.71e-13 70.5
Msa0346400 AT1G27220.1 42.500 80 45 1 567 646 14 92 5.18e-12 66.2
Msa0346400 AT1G70030.3 40.741 108 55 2 483 583 16 121 1.15e-12 66.2
Msa0346400 AT1G70030.3 48.649 74 37 1 86 159 20 92 1.58e-12 65.9
Msa0346400 AT1G70030.3 40.000 105 54 2 2 99 16 118 7.33e-12 63.9
Msa0346400 AT1G70030.2 34.194 155 61 3 483 630 16 136 2.07e-12 65.9
Msa0346400 AT1G70030.2 48.649 74 37 1 86 159 20 92 2.73e-12 65.9
Msa0346400 AT1G70030.2 33.121 157 62 3 2 151 16 136 3.35e-12 65.5
Msa0346400 AT4G12020.11 50.000 72 34 1 86 157 306 375 2.80e-12 71.6
Msa0346400 AT4G12020.10 50.000 72 34 1 86 157 306 375 3.08e-12 71.6
Msa0346400 AT4G12020.6 50.000 72 34 1 86 157 306 375 3.13e-12 71.6
Msa0346400 AT4G12020.8 50.000 72 34 1 86 157 306 375 3.13e-12 71.6
Msa0346400 AT4G12020.5 50.000 72 34 1 86 157 239 308 3.15e-12 71.6
Msa0346400 AT4G12020.3 50.000 72 34 1 86 157 306 375 3.17e-12 71.6
Msa0346400 AT4G12020.2 50.000 72 34 1 86 157 306 375 3.17e-12 71.6
Msa0346400 AT4G12020.1 50.000 72 34 1 86 157 306 375 3.22e-12 71.6
Msa0346400 AT4G12020.9 50.000 72 34 1 86 157 306 375 3.22e-12 71.6
Msa0346400 AT4G12020.4 50.000 72 34 1 86 157 306 375 3.22e-12 71.6
Msa0346400 AT4G12020.7 50.000 72 34 1 86 157 306 375 3.33e-12 71.6
Msa0346400 AT1G27280.1 30.496 141 96 2 14 153 6 145 2.02e-11 65.5
Msa0346400 AT1G27250.1 46.154 65 34 1 88 152 21 84 3.34e-11 62.4
Msa0346400 AT5G15040.1 46.269 67 35 1 91 157 6 71 8.02e-11 59.7
Msa0346400 AT5G15040.3 46.269 67 35 1 91 157 6 71 8.02e-11 59.7
Msa0346400 AT5G15040.2 46.269 67 35 1 91 157 6 71 8.02e-11 59.7

Find 188 sgRNAs with CRISPR-Local

Find 643 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATCAAGCTGGAAATTT+TGG 0.111303 3_1:+6816511 Msa0346400:CDS
ACCTTCTTTCTTCTTGTAAA+TGG 0.145840 3_1:-6816071 None:intergenic
ACCTTCTTTCTTCTTGTAAA+TGG 0.145840 3_1:-6823897 None:intergenic
AGGGCATACGGATTTAATTT+TGG 0.153636 3_1:+6822313 Msa0346400:CDS
TGTCTATCAGTCTGGAAATT+TGG 0.158326 3_1:+6824043 Msa0346400:CDS
TTCTGGCACGTTGCTTATTC+TGG 0.158749 3_1:+6815990 Msa0346400:CDS
TTCTGGCACGTTGCTTATTC+TGG 0.158749 3_1:+6823816 Msa0346400:CDS
CAACATGTAATGTGTGTTTA+AGG 0.161532 3_1:+6816642 Msa0346400:CDS
GGGAATTTCATAAAACTTAT+TGG 0.162427 3_1:+6823673 Msa0346400:CDS
AGGGCATACAGATTTAATTT+TGG 0.190456 3_1:+6814382 Msa0346400:CDS
TGTCTATCAGTCTCGGAATT+TGG 0.192092 3_1:+6816217 Msa0346400:intron
ATAAGAAGAATTGACTTTAA+AGG 0.192960 3_1:-6816108 None:intergenic
ATAAGAAGAATTGACTTTAA+AGG 0.192960 3_1:-6823934 None:intergenic
CTATCATGCTTAATGTATTT+TGG 0.196702 3_1:-6816680 None:intergenic
CTATCATGCTTAATGTATTT+TGG 0.196702 3_1:-6824506 None:intergenic
TTTGAATAAGTAATGGTTCT+TGG 0.234598 3_1:-6823713 None:intergenic
TTTGAATAAGCAATGGTTCT+TGG 0.242227 3_1:-6815887 None:intergenic
TACCATGTCTTGCTTGCTTT+TGG 0.255664 3_1:+6823963 Msa0346400:CDS
TTCCATCTTGACAAAATTCA+TGG 0.285699 3_1:-6824330 None:intergenic
AAGATGGTTGTAAAATTTCT+TGG 0.292218 3_1:+6815748 Msa0346400:CDS
AAGATGGTTGTAAAATTTCT+TGG 0.292218 3_1:+6823574 Msa0346400:CDS
TTCCAGCTTGATATAATTCA+TGG 0.303967 3_1:-6816504 None:intergenic
ATTTCGAAATTAAATCTTCA+TGG 0.307910 3_1:-6822046 None:intergenic
GTTGTGATTCGATATTTCTT+TGG 0.310165 3_1:-6814422 None:intergenic
ACAACATGTAAAGTGTGTTT+AGG 0.310726 3_1:+6824467 Msa0346400:CDS
ATCTCGAAATTAAATCTTCA+TGG 0.311366 3_1:-6814112 None:intergenic
TACCATGTCTTACTTGCCTT+TGG 0.313905 3_1:+6816137 Msa0346400:CDS
GTCTATCAGTCTGGAAATTT+GGG 0.319305 3_1:+6824044 Msa0346400:CDS
GTCTATCAGTCTCGGAATTT+GGG 0.321027 3_1:+6816218 Msa0346400:intron
CTTTCAAAACCCCACCTTCT+CGG 0.331626 3_1:-6824413 None:intergenic
CAACATGTAAAGTGTGTTTA+GGG 0.332853 3_1:+6824468 Msa0346400:CDS
GTCGCTTCATGTAAAAGTTC+TGG 0.333120 3_1:+6816185 Msa0346400:CDS
GTCGCTTCATGTAAAAGTTC+TGG 0.333120 3_1:+6824011 Msa0346400:CDS
GGTGTGATTCGATATTTCTT+TGG 0.344227 3_1:-6822353 None:intergenic
TAAGAATGAGGAAAAGTATA+AGG 0.345100 3_1:+6822208 Msa0346400:CDS
TCATCATCGTCTCGATCTAA+TGG 0.350927 3_1:-6814173 None:intergenic
AAAGGAAAACGCCTACTTGC+TGG 0.351938 3_1:+6816718 Msa0346400:CDS
AAAGGAAAACGCCTACTTGC+TGG 0.351938 3_1:+6824544 Msa0346400:CDS
ATCAGTCTGGAAATTTGGGC+TGG 0.359141 3_1:+6824048 Msa0346400:CDS
CCAAGGCGATCAATCAATTC+TGG 0.360139 3_1:+6823799 Msa0346400:CDS
ACAAATTATGAAGGATTTCA+AGG 0.367445 3_1:+6814034 Msa0346400:CDS
ACAAATTATGAAGGATTTCA+AGG 0.367445 3_1:+6821968 Msa0346400:CDS
GTAGGTTTGGATTTGAGAAA+AGG 0.371809 3_1:+6821925 Msa0346400:intron
CCAAGACGATCAATCAATTC+TGG 0.377012 3_1:+6815973 Msa0346400:intron
ATTAAGAGTGTACGAGTTGT+TGG 0.382597 3_1:+6814085 Msa0346400:CDS
ATTAAGAGTGTACGAGTTGT+TGG 0.382597 3_1:+6822019 Msa0346400:CDS
TAACCGGTGTCAAGCTGAAC+TGG 0.385684 3_1:-6822377 None:intergenic
TACACCTATGTTGGCCTTGT+CGG 0.389440 3_1:-6824147 None:intergenic
ATGTGTTTCATGATAAGAAT+AGG 0.391652 3_1:+6814264 Msa0346400:CDS
TGAGAGCTTCTTCATCTTGA+AGG 0.397887 3_1:-6813931 None:intergenic
AACACTTATATCAATTCTTC+CGG 0.403715 3_1:-6822261 None:intergenic
AGATGGTTGTAAAATTTCTT+GGG 0.404155 3_1:+6815749 Msa0346400:CDS
AGATGGTTGTAAAATTTCTT+GGG 0.404155 3_1:+6823575 Msa0346400:CDS
TAAGAGCTTCTTCATCTTGA+AGG 0.409745 3_1:-6821865 None:intergenic
TTTCAAAACCCCACCTTCTC+GGG 0.416348 3_1:-6824412 None:intergenic
GTAGGTTTGGATATGAGAAA+AGG 0.420608 3_1:+6813991 Msa0346400:intron
CAATAACCAGATTACTCAAC+TGG 0.422972 3_1:-6816782 None:intergenic
CAATAACCAGATTACTCAAC+TGG 0.422972 3_1:-6824608 None:intergenic
GATGACCTCTTTCACTTCGC+TGG 0.424299 3_1:+6815807 Msa0346400:CDS
GATGACCTCTTTCAATTCGC+TGG 0.428564 3_1:+6823633 Msa0346400:CDS
ATCAGTCTCGGAATTTGGGT+TGG 0.430121 3_1:+6816222 Msa0346400:intron
AAAGTAAAAGATGTGTTTCA+TGG 0.431621 3_1:+6822185 Msa0346400:CDS
TCAGTCTCGGAATTTGGGTT+GGG 0.436264 3_1:+6816223 Msa0346400:intron
TAGGTTTGGATTTGAGAAAA+GGG 0.438311 3_1:+6821926 Msa0346400:intron
TAAACACACTTTACATGTTG+TGG 0.439177 3_1:-6824465 None:intergenic
AGCGGATATTTGATCATGAC+AGG 0.440460 3_1:+6816020 Msa0346400:CDS
AGCGGATATTTGATCATGAC+AGG 0.440460 3_1:+6823846 Msa0346400:CDS
GTCATCGAAATCTAGATCTC+TGG 0.451722 3_1:-6823616 None:intergenic
TCGATATTTCTTTGGCAAGA+AGG 0.453756 3_1:-6814414 None:intergenic
TGTGTTTCATGATAAGAATA+GGG 0.458462 3_1:+6814265 Msa0346400:CDS
TCGATATTTCTTTGGCAAGA+AGG 0.460534 3_1:-6822345 None:intergenic
GTCTTACTTGCCTTTGGCAA+AGG 0.463698 3_1:+6816143 Msa0346400:CDS
TCGCTGGTGTGTGCAAGAAT+TGG 0.464667 3_1:+6815823 Msa0346400:CDS
TAGGTTTGGATATGAGAAAA+GGG 0.466934 3_1:+6813992 Msa0346400:intron
TCGCTGGTGTGTGCAAGAAT+TGG 0.467150 3_1:+6823649 Msa0346400:CDS
TTTGTCAAGATGGAAACTTT+GGG 0.468280 3_1:+6824338 Msa0346400:CDS
AGGAAAAGGATTTCTTATCA+TGG 0.468556 3_1:-6815917 None:intergenic
AGGAAAAGGATTTCTTATCA+TGG 0.468556 3_1:-6823743 None:intergenic
AAATTAAATCCGTATGCCCT+TGG 0.473209 3_1:-6822310 None:intergenic
TAAACACACATTACATGTTG+TGG 0.475750 3_1:-6816639 None:intergenic
AAAACGCCTACTTGCTGGAT+TGG 0.477038 3_1:+6816723 Msa0346400:CDS
AAAACGCCTACTTGCTGGAT+TGG 0.477038 3_1:+6824549 Msa0346400:CDS
GTCATCGAAATCTAGACCTC+TGG 0.482374 3_1:-6815790 None:intergenic
GGAAAAGGATTTCTTATCAT+GGG 0.491468 3_1:-6815916 None:intergenic
GGAAAAGGATTTCTTATCAT+GGG 0.491468 3_1:-6823742 None:intergenic
CTCAGGATGGTTAGTTGTGA+TGG 0.492017 3_1:+6824242 Msa0346400:CDS
AACCATGAATTATATCAAGC+TGG 0.494471 3_1:+6816502 Msa0346400:CDS
ATATGAAATCAAACTTCCAT+TGG 0.495726 3_1:+6822091 Msa0346400:CDS
AAGATGAAGAAGCTCTTAGT+TGG 0.497271 3_1:+6821870 Msa0346400:CDS
TCCATTTACAAGAAGAAAGA+AGG 0.500617 3_1:+6816070 Msa0346400:CDS
TCCATTTACAAGAAGAAAGA+AGG 0.500617 3_1:+6823896 Msa0346400:CDS
AGAGTGAATGAGCTGTTTCA+AGG 0.505619 3_1:+6814362 Msa0346400:CDS
TCGGTCAGCTATGCTGATGA+AGG 0.509137 3_1:-6815937 None:intergenic
TCGGTCAGCTATGCTGATGA+AGG 0.509137 3_1:-6823763 None:intergenic
AGTGATTCATATTGCTTCAG+AGG 0.510657 3_1:+6824274 Msa0346400:CDS
AGTTTGTATGTCTATCAGTC+TGG 0.514054 3_1:+6824035 Msa0346400:CDS
TCATCGTCGTCACGATCCAA+TGG 0.515446 3_1:-6822107 None:intergenic
GAGAGCTTCTTCATCTTGAA+GGG 0.517573 3_1:-6813930 None:intergenic
AATCACAACTTCAGTTCAGC+TGG 0.519790 3_1:+6814436 Msa0346400:CDS
TCAGTCTGGAAATTTGGGCT+GGG 0.521625 3_1:+6824049 Msa0346400:CDS
AACATGTAATGTGTGTTTAA+GGG 0.523014 3_1:+6816643 Msa0346400:CDS
CCAGAATTGATTGATCGCCT+TGG 0.527310 3_1:-6823799 None:intergenic
ATTGTTAAGGATTTCAAGGC+CGG 0.529167 3_1:+6822242 Msa0346400:CDS
ACAAAGTCAACAATCTTCCA+TGG 0.530048 3_1:-6816269 None:intergenic
AGCTATGCTGATGAAGGAAA+AGG 0.531287 3_1:-6815931 None:intergenic
AGCTATGCTGATGAAGGAAA+AGG 0.531287 3_1:-6823757 None:intergenic
TGTTGTGGATGAAATATTGA+TGG 0.532297 3_1:-6816624 None:intergenic
TGTTGTGGATGAAATATTGA+TGG 0.532297 3_1:-6824450 None:intergenic
GGCTGAAAGAATTGATGCTA+GGG 0.533185 3_1:+6821989 Msa0346400:CDS
AAGAGCTTCTTCATCTTGAA+GGG 0.534361 3_1:-6821864 None:intergenic
ACAAAGTCAACAACCTTCCA+TGG 0.536142 3_1:-6824095 None:intergenic
TGATCTGGTCCAAGGGCATA+CGG 0.537974 3_1:+6822301 Msa0346400:CDS
TAACATCTACCTCACTCCTC+AGG 0.540088 3_1:+6816399 Msa0346400:CDS
TAACATCTACCTCACTCCTC+AGG 0.540088 3_1:+6824225 Msa0346400:CDS
AGGCTGAAAGAATTGATGCT+AGG 0.540112 3_1:+6821988 Msa0346400:CDS
ACTTGCCTTTGGCAAAGGAT+CGG 0.544410 3_1:+6816148 Msa0346400:CDS
AGTTTGATTTCATATTCAGT+TGG 0.545841 3_1:-6814149 None:intergenic
AGTTTGATTTCATATTCAGT+TGG 0.545841 3_1:-6822083 None:intergenic
CAAGTCAAGTACACCTATGT+TGG 0.548742 3_1:-6816330 None:intergenic
CAAGTCAAGTACACCTATGT+TGG 0.548742 3_1:-6824156 None:intergenic
ATTCAACAATGGAAAGTCCA+TGG 0.553899 3_1:+6816252 Msa0346400:CDS
ATTCAACAATGGAAAGTCCA+TGG 0.553899 3_1:+6824078 Msa0346400:CDS
ATAAGTGTTGCTGCGGCAAG+AGG 0.559399 3_1:+6822275 Msa0346400:CDS
ACTTCAGTTCAGCTGGACAT+TGG 0.562552 3_1:+6814443 Msa0346400:CDS
ACACACCAGCGAAGTGAAAG+AGG 0.562922 3_1:-6815812 None:intergenic
GCTTATTCTGGCTGTTCTAG+CGG 0.565805 3_1:+6816002 Msa0346400:CDS
GCTTATTCTGGCTGTTCTAG+CGG 0.565805 3_1:+6823828 Msa0346400:CDS
CATTGAGCAACCCGAGAAGG+TGG 0.569290 3_1:+6824402 Msa0346400:CDS
AGAGGGAATGATCTGGTCCA+AGG 0.570236 3_1:+6822293 Msa0346400:CDS
TTCCTCCGATCCTTTGCCAA+AGG 0.571726 3_1:-6816153 None:intergenic
TGTGTTTCATGGTAAGAATG+AGG 0.572647 3_1:+6822196 Msa0346400:CDS
TGCGGCAAGAGGGAATGATC+TGG 0.572764 3_1:+6822286 Msa0346400:CDS
AACAATGGAAAGTCCATGGA+AGG 0.572932 3_1:+6824082 Msa0346400:CDS
AAGATGAAGAAGCTCTCAGT+TGG 0.573928 3_1:+6813936 Msa0346400:exon
ACACACCAGCGAATTGAAAG+AGG 0.578254 3_1:-6823638 None:intergenic
AGTGAGGTAGATGTTACATC+GGG 0.579813 3_1:-6816392 None:intergenic
AGTGAGGTAGATGTTACATC+GGG 0.579813 3_1:-6824218 None:intergenic
GAGTGAATGAGCTGTTTCAA+GGG 0.583006 3_1:+6814363 Msa0346400:CDS
ATGCATTGAGCAACCCGAGA+AGG 0.585187 3_1:+6824399 Msa0346400:CDS
TTGGGTTACATATTCAACAA+TGG 0.589120 3_1:+6816241 Msa0346400:CDS
GACGATGATGACGAACTACA+AGG 0.589561 3_1:+6822122 Msa0346400:CDS
GCAATGAATAACATACAAGA+TGG 0.590425 3_1:+6815732 Msa0346400:CDS
GCAATGAATAACATACAAGA+TGG 0.590425 3_1:+6823558 Msa0346400:CDS
CTTTAGACATCTACACTATG+AGG 0.594856 3_1:+6816748 Msa0346400:CDS
CTTTAGACATCTACACTATG+AGG 0.594856 3_1:+6824574 Msa0346400:CDS
CTGGTGTGTGCAAGAATTGG+AGG 0.595567 3_1:+6815826 Msa0346400:CDS
CTGGTGTGTGCAAGAATTGG+AGG 0.595567 3_1:+6823652 Msa0346400:CDS
TGCCTTTGGCAAAGGATCGG+AGG 0.596406 3_1:+6816151 Msa0346400:CDS
TAAGTGTTGCTGCGGCAAGA+GGG 0.604842 3_1:+6822276 Msa0346400:CDS
TGCCAAAAGCAAGCAAGACA+TGG 0.610086 3_1:-6823965 None:intergenic
GATGATGATGAACAACAAGA+AGG 0.610778 3_1:+6814191 Msa0346400:CDS
GTCACTGACAAGGCCAACAT+AGG 0.613361 3_1:+6816317 Msa0346400:CDS
GAGTGAGGTAGATGTTACAT+CGG 0.616275 3_1:-6816393 None:intergenic
GAGTGAGGTAGATGTTACAT+CGG 0.616275 3_1:-6824219 None:intergenic
ATTGAGCAACCCGAGAAGGT+GGG 0.616952 3_1:+6824403 Msa0346400:CDS
GAGGGAATGATCTGGTCCAA+GGG 0.617326 3_1:+6822294 Msa0346400:CDS
CCGAAAAGTTTATCACTCCA+AGG 0.620313 3_1:+6823782 Msa0346400:CDS
AAAGCACCAATCCAGCAAGT+AGG 0.620337 3_1:-6816729 None:intergenic
AAAGCACCAATCCAGCAAGT+AGG 0.620337 3_1:-6824555 None:intergenic
TTGAGCAACCCGAGAAGGTG+GGG 0.622323 3_1:+6824404 Msa0346400:CDS
CTGGGTTACATATTCAACAA+TGG 0.624667 3_1:+6824067 Msa0346400:CDS
AGAGTGTACGAGTTGTTGGA+CGG 0.625456 3_1:+6814089 Msa0346400:CDS
AGAGTGTACGAGTTGTTGGA+CGG 0.625456 3_1:+6822023 Msa0346400:CDS
CCTCCAGTTCAGCTTGACAC+CGG 0.627356 3_1:+6822374 Msa0346400:CDS
GTCACCGACAAGGCCAACAT+AGG 0.627828 3_1:+6824143 Msa0346400:CDS
ATGCTTGATCTCATTTCCAG+AGG 0.630521 3_1:+6815774 Msa0346400:CDS
ATCTACCTCACTCCTCAGGA+TGG 0.644112 3_1:+6816403 Msa0346400:CDS
ATCTACCTCACTCCTCAGGA+TGG 0.644112 3_1:+6824229 Msa0346400:CDS
AATTGATATAAGTGTTGCTG+CGG 0.644511 3_1:+6822268 Msa0346400:CDS
TAGAACTCGAGTTCCTCCAA+AGG 0.651017 3_1:+6816700 Msa0346400:CDS
TAGAACTCGAGTTCCTCCAA+AGG 0.651017 3_1:+6824526 Msa0346400:CDS
TAGACATCTACACTATGAGG+TGG 0.658182 3_1:+6816751 Msa0346400:CDS
TAGACATCTACACTATGAGG+TGG 0.658182 3_1:+6824577 Msa0346400:CDS
TATATACGTTGTCACCGACA+AGG 0.661708 3_1:+6824133 Msa0346400:CDS
TATATACGTTGTCACTGACA+AGG 0.666405 3_1:+6816307 Msa0346400:CDS
TGCCAAAGGCAAGTAAGACA+TGG 0.667289 3_1:-6816139 None:intergenic
CCGGTGTCAAGCTGAACTGG+AGG 0.668666 3_1:-6822374 None:intergenic
ACTAACCATCCTGAGGAGTG+AGG 0.672997 3_1:-6816408 None:intergenic
ACTAACCATCCTGAGGAGTG+AGG 0.672997 3_1:-6824234 None:intergenic
GCGGATATTTGATCATGACA+GGG 0.678093 3_1:+6816021 Msa0346400:CDS
GCGGATATTTGATCATGACA+GGG 0.678093 3_1:+6823847 Msa0346400:CDS
TGGTGTGTGCAAGAATTGGA+GGG 0.700448 3_1:+6815827 Msa0346400:CDS
TGGTGTGTGCAAGAATTGGA+GGG 0.700448 3_1:+6823653 Msa0346400:CDS
AACATGTAAAGTGTGTTTAG+GGG 0.701783 3_1:+6824469 Msa0346400:CDS
CGGATATTTGATCATGACAG+GGG 0.702309 3_1:+6816022 Msa0346400:CDS
CGGATATTTGATCATGACAG+GGG 0.702309 3_1:+6823848 Msa0346400:CDS
CATCACAACTAACCATCCTG+AGG 0.720834 3_1:-6816415 None:intergenic
CATCACAACTAACCATCCTG+AGG 0.720834 3_1:-6824241 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAATATATAAATAA+TGG - chr3_1:6822411-6822430 None:intergenic 0.0%
!!! ACTATTAAATTTTAATCTTA+GGG - chr3_1:6814775-6814794 None:intergenic 10.0%
!!! TACTATTAAATTTTAATCTT+AGG - chr3_1:6814776-6814795 None:intergenic 10.0%
!!! TAATATGTTTTTTTTTTTGA+AGG + chr3_1:6815443-6815462 Msa0346400:intron 10.0%
!! TATATATTGTCATTAAAAAT+GGG - chr3_1:6815615-6815634 None:intergenic 10.0%
!! TTATATATTGTCATTAAAAA+TGG - chr3_1:6815616-6815635 None:intergenic 10.0%
!!! AATAAAAAAAACATACTTTT+CGG + chr3_1:6815643-6815662 Msa0346400:intron 10.0%
!!! TTCTAAAAATTTTATATTTG+TGG - chr3_1:6816360-6816379 None:intergenic 10.0%
!! CAAAAAATAATGTTAAATAT+TGG - chr3_1:6817309-6817328 None:intergenic 10.0%
!!! ATTATATATGCATTTTATAT+AGG + chr3_1:6817658-6817677 Msa0346400:intron 10.0%
!!! CTATTTGTATTTAAAATTAA+GGG + chr3_1:6817861-6817880 Msa0346400:intron 10.0%
!!! ATTACTAATATTTTTATCAT+AGG + chr3_1:6818276-6818295 Msa0346400:intron 10.0%
!!! GAAAAAATAATGTTTAAAAT+TGG - chr3_1:6818311-6818330 None:intergenic 10.0%
!!! TGTTAATAATATTTTTTTAG+AGG + chr3_1:6818431-6818450 Msa0346400:intron 10.0%
!! CAAAAAATAATGTTAAAAAT+TGG - chr3_1:6818628-6818647 None:intergenic 10.0%
!!! CTTTTTATTAAACAAAATAA+AGG + chr3_1:6820688-6820707 Msa0346400:intron 10.0%
!!! AACTTGATTATTTTTTATTA+CGG - chr3_1:6820935-6820954 None:intergenic 10.0%
!!! AAATAATCAAGTTAATTTTT+TGG + chr3_1:6820942-6820961 Msa0346400:intron 10.0%
!!! AATAATCAAGTTAATTTTTT+GGG + chr3_1:6820943-6820962 Msa0346400:intron 10.0%
!!! TATAATTTAATTTGTATTAG+TGG + chr3_1:6821077-6821096 Msa0346400:intron 10.0%
!!! TTTTTTATAAGAAAAAGTTT+AGG - chr3_1:6821512-6821531 None:intergenic 10.0%
!! ATAAATATATAAATAATGGT+AGG - chr3_1:6822407-6822426 None:intergenic 10.0%
!! AAAAAAAAAAACATATCTTT+CGG + chr3_1:6823470-6823489 Msa0346400:intron 10.0%
!!! TTCTAAAAATTTTATATTTG+TGG - chr3_1:6816360-6816379 None:intergenic 10.0%
!!! TATATAAAGTGTCAATAAAT+TGG + chr3_1:6814575-6814594 Msa0346400:intron 15.0%
!! TATTATCATTCACTAAAAAA+TGG - chr3_1:6815491-6815510 None:intergenic 15.0%
!! ACATTATACTATTAATATGT+TGG + chr3_1:6815541-6815560 Msa0346400:intron 15.0%
!!! ATTGCATTATTTTATAATTC+CGG + chr3_1:6816539-6816558 Msa0346400:intron 15.0%
!!! TTTTACTTTAATTGATTCAA+AGG + chr3_1:6817060-6817079 Msa0346400:intron 15.0%
!! CAAAAAATATTGTTAAAGAA+CGG - chr3_1:6817247-6817266 None:intergenic 15.0%
!!! TTGTTACTAATTTTTTTTAG+AGG + chr3_1:6817274-6817293 Msa0346400:intron 15.0%
!!! TTACTAATCTTATTTTTTTG+AGG + chr3_1:6817339-6817358 Msa0346400:intron 15.0%
!!! GCTATTTGTATTTAAAATTA+AGG + chr3_1:6817860-6817879 Msa0346400:intron 15.0%
!!! TTTAAAATTAAGGGTATTTT+TGG + chr3_1:6817870-6817889 Msa0346400:intron 15.0%
!!! ATCAAAGTTGATTAATTTTA+TGG - chr3_1:6818058-6818077 None:intergenic 15.0%
!! CAAAAAATATTGTTAAAGAT+TGG - chr3_1:6818466-6818485 None:intergenic 15.0%
!!! TGTTACTAATATTTTTTTAG+AGG + chr3_1:6818494-6818513 Msa0346400:intron 15.0%
!!! GTTATTAATATTTTTATCAG+AGG + chr3_1:6818593-6818612 Msa0346400:intron 15.0%
!!! GTTACTAATATTTTTTTTAG+AGG + chr3_1:6818743-6818762 Msa0346400:intron 15.0%
!! GCAAAAAATATTGTTAAAAT+TGG - chr3_1:6818778-6818797 None:intergenic 15.0%
!! ATGAAAAAAAAATCATGTTT+CGG - chr3_1:6819065-6819084 None:intergenic 15.0%
!! TAATAAAAAGAACAAAGAAA+TGG - chr3_1:6820678-6820697 None:intergenic 15.0%
!! TTAGTAAAATTTATACCATA+TGG - chr3_1:6821289-6821308 None:intergenic 15.0%
!! TCTATAAAGATTCAATAAAT+TGG + chr3_1:6822448-6822467 Msa0346400:intron 15.0%
!!! ATCTTTTCTACAAATTATGA+AGG + chr3_1:6814025-6814044 Msa0346400:CDS 20.0%
!!! TGAGTTTTTAGAAATTGTTA+AGG + chr3_1:6814298-6814317 Msa0346400:CDS 20.0%
!!! AGAAATTGTTAAGGATTTTA+TGG + chr3_1:6814307-6814326 Msa0346400:CDS 20.0%
!! ATGTTCAATATTAATATTGG+TGG - chr3_1:6815299-6815318 None:intergenic 20.0%
!! CGAATGTTCAATATTAATAT+TGG - chr3_1:6815302-6815321 None:intergenic 20.0%
!!! AAGGAAAAGTATTAATATGT+TGG + chr3_1:6815462-6815481 Msa0346400:intron 20.0%
!! GGGAATTTCATAAAAATTAT+TGG + chr3_1:6815847-6815866 Msa0346400:CDS 20.0%
!! AAATTATTGGAAAAAGTTCT+TGG + chr3_1:6815860-6815879 Msa0346400:CDS 20.0%
!!! ATAAGAAGAATTGACTTTAA+AGG - chr3_1:6816111-6816130 None:intergenic 20.0%
!!! TTGCATTATTTTATAATTCC+GGG + chr3_1:6816540-6816559 Msa0346400:intron 20.0%
!! CAAATTATTGGAAAACAAAA+GGG - chr3_1:6816858-6816877 None:intergenic 20.0%
!! TCAAATTATTGGAAAACAAA+AGG - chr3_1:6816859-6816878 None:intergenic 20.0%
!!! TGAGATAAATAGTTTTGAAA+TGG + chr3_1:6816930-6816949 Msa0346400:intron 20.0%
!!! CTTTTTTTTATTACTACTAG+CGG + chr3_1:6817179-6817198 Msa0346400:intron 20.0%
!!! TCCACGTATTATTTTATAAT+TGG + chr3_1:6817838-6817857 Msa0346400:intron 20.0%
!! TTATTTATAAGCACACATTT+GGG - chr3_1:6817910-6817929 None:intergenic 20.0%
!! TTTATTTATAAGCACACATT+TGG - chr3_1:6817911-6817930 None:intergenic 20.0%
!!! TAAGAATTATTTGACTTTAC+TGG - chr3_1:6817977-6817996 None:intergenic 20.0%
!! TGAAAGAAAAAAAAACTTAC+AGG + chr3_1:6818089-6818108 Msa0346400:intron 20.0%
!!! TGTTACTAATCTTTTATTAG+AGG + chr3_1:6818368-6818387 Msa0346400:intron 20.0%
!! TTTGTTAGCACTATATTAAA+TGG - chr3_1:6818212-6818231 None:intergenic 20.0%
!!! TGTTACTAATCTTTTATTAG+AGG + chr3_1:6818368-6818387 Msa0346400:intron 20.0%
!!! GTTACTAATTTTTTTTCTAG+AGG + chr3_1:6818806-6818825 Msa0346400:intron 20.0%
!! CTTCAGTTGATTATATAATT+CGG - chr3_1:6818994-6819013 None:intergenic 20.0%
!!! AACATGATTTTTTTTTCATG+TGG + chr3_1:6819066-6819085 Msa0346400:intron 20.0%
!!! CTATAAAATTGAGTTGAATT+CGG - chr3_1:6819820-6819839 None:intergenic 20.0%
!!! GAATTCAACTCAATTTTATA+GGG + chr3_1:6819819-6819838 Msa0346400:intron 20.0%
!!! AAAATTTTGATGGTTTTCTT+TGG - chr3_1:6820009-6820028 None:intergenic 20.0%
!! GAACAATATTGAAAAATTTG+AGG - chr3_1:6820834-6820853 None:intergenic 20.0%
!!! TGTTTGATTGCTTATAATTT+TGG + chr3_1:6820883-6820902 Msa0346400:intron 20.0%
!! AGAAAATTAGTCAATTAAAG+TGG + chr3_1:6820999-6821018 Msa0346400:intron 20.0%
!! GAAAATTAGTCAATTAAAGT+GGG + chr3_1:6821000-6821019 Msa0346400:intron 20.0%
!!! TTTAATTTGTATTAGTGGTA+AGG + chr3_1:6821082-6821101 Msa0346400:intron 20.0%
!!! ATTTTGTTGTTGATCTTTAA+AGG + chr3_1:6821614-6821633 Msa0346400:intron 20.0%
!!! TTTTGTTGTTGATCTTTAAA+GGG + chr3_1:6821615-6821634 Msa0346400:intron 20.0%
!! TTAAACAAAATTTGGAAATG+AGG - chr3_1:6821641-6821660 None:intergenic 20.0%
!!! TCATTTCCAAATTTTGTTTA+AGG + chr3_1:6821640-6821659 Msa0346400:intron 20.0%
!!! ATCTTTTCTACAAATTATGA+AGG + chr3_1:6814025-6814044 Msa0346400:CDS 20.0%
!! ATTTCGAAATTAAATCTTCA+TGG - chr3_1:6822049-6822068 None:intergenic 20.0%
!!! GGAGTTTTTAAAAATTGTTA+AGG + chr3_1:6822229-6822248 Msa0346400:CDS 20.0%
!! AAAAATTGTTAAGGATTTCA+AGG + chr3_1:6822238-6822257 Msa0346400:CDS 20.0%
!! ATTAAAAGAAAACTGTCTAT+AGG + chr3_1:6822715-6822734 Msa0346400:intron 20.0%
!!! ATAAGAAGAATTGACTTTAA+AGG - chr3_1:6816111-6816130 None:intergenic 20.0%
! TATGAGAAAAGGGAAAAATA+TGG + chr3_1:6814002-6814021 Msa0346400:CDS 25.0%
! ACAAATTATGAAGGATTTCA+AGG + chr3_1:6814034-6814053 Msa0346400:CDS 25.0%
! ATCTCGAAATTAAATCTTCA+TGG - chr3_1:6814115-6814134 None:intergenic 25.0%
!! AGTTTGATTTCATATTCAGT+TGG - chr3_1:6814152-6814171 None:intergenic 25.0%
! ATGTGTTTCATGATAAGAAT+AGG + chr3_1:6814264-6814283 Msa0346400:CDS 25.0%
! TGTGTTTCATGATAAGAATA+GGG + chr3_1:6814265-6814284 Msa0346400:CDS 25.0%
! TAGCTAGATAACTAAGTTTA+TGG - chr3_1:6814557-6814576 None:intergenic 25.0%
! ATCATAGTTTAACGATAAGT+TGG + chr3_1:6814677-6814696 Msa0346400:intron 25.0%
! TTAGGGGAAATATAGTAAAT+TGG + chr3_1:6814716-6814735 Msa0346400:intron 25.0%
!!! TTTTCTTTTGTACAAGTTGA+TGG + chr3_1:6814869-6814888 Msa0346400:intron 25.0%
!! ATCTTTGGAGAATTAAAAGT+AGG + chr3_1:6814934-6814953 Msa0346400:intron 25.0%
!! TCTTTGGAGAATTAAAAGTA+GGG + chr3_1:6814935-6814954 Msa0346400:intron 25.0%
!! TTCATGCATTTTATGTCTAT+AGG + chr3_1:6814966-6814985 Msa0346400:intron 25.0%
!! CAGGTTTACAAAATATTTTC+TGG - chr3_1:6815056-6815075 None:intergenic 25.0%
!!! TTTTAATTGCAAAGTTTCAC+AGG - chr3_1:6815182-6815201 None:intergenic 25.0%
! CTCGTATAAATATGAGTTAA+TGG + chr3_1:6815265-6815284 Msa0346400:intron 25.0%
! GTACTCACATTAAAAAACAA+AGG + chr3_1:6815513-6815532 Msa0346400:intron 25.0%
! ATCACAACAATGACAATATT+AGG - chr3_1:6815701-6815720 None:intergenic 25.0%
! AAGATGGTTGTAAAATTTCT+TGG + chr3_1:6815748-6815767 Msa0346400:CDS 25.0%
! AGATGGTTGTAAAATTTCTT+GGG + chr3_1:6815749-6815768 Msa0346400:CDS 25.0%
! GTATACATTCAATATTTCCT+CGG - chr3_1:6816468-6816487 None:intergenic 25.0%
!! TTATATCAAGCTGGAAATTT+TGG + chr3_1:6816511-6816530 Msa0346400:CDS 25.0%
!! TATATCAAGCTGGAAATTTT+GGG + chr3_1:6816512-6816531 Msa0346400:CDS 25.0%
!!! TGCATTATTTTATAATTCCG+GGG + chr3_1:6816541-6816560 Msa0346400:intron 25.0%
! AACATGTAATGTGTGTTTAA+GGG + chr3_1:6816643-6816662 Msa0346400:CDS 25.0%
!! CTATCATGCTTAATGTATTT+TGG - chr3_1:6816683-6816702 None:intergenic 25.0%
! AAAGGGAAACATAAAAAACA+TGG - chr3_1:6816841-6816860 None:intergenic 25.0%
! TTTCAGTCTAGTCAAATTAT+TGG - chr3_1:6816870-6816889 None:intergenic 25.0%
! AATCTTAAATGAAATGCAGA+AGG - chr3_1:6817042-6817061 None:intergenic 25.0%
! AATTCAATATGTTCAACATG+TGG - chr3_1:6817110-6817129 None:intergenic 25.0%
! AAGCAATGAAGCTAAATTTA+TGG - chr3_1:6817140-6817159 None:intergenic 25.0%
! CAAACGTGAGTAAAAAATAA+TGG - chr3_1:6817384-6817403 None:intergenic 25.0%
! TTACAATTGATCAAAGACTA+AGG + chr3_1:6817404-6817423 Msa0346400:intron 25.0%
!!! ATATGGAATACTGTTTTTTG+TGG + chr3_1:6817452-6817471 Msa0346400:intron 25.0%
! ACAGATATACAACATAAAAG+CGG + chr3_1:6817528-6817547 Msa0346400:intron 25.0%
!!! TTTTTTGTGAGTTTGATCTT+TGG + chr3_1:6817591-6817610 Msa0346400:intron 25.0%
! GCCAATTATAAAATAATACG+TGG - chr3_1:6817842-6817861 None:intergenic 25.0%
!! TATGGATTATTTGACTTTAC+TGG - chr3_1:6818040-6818059 None:intergenic 25.0%
! CGAATTATATAATCAACTGA+AGG + chr3_1:6818992-6819011 Msa0346400:intron 25.0%
!!! TTTTTATTTTGTGTGGTTTC+TGG - chr3_1:6819167-6819186 None:intergenic 25.0%
! ATATTCGATAAAGTTTGATC+CGG + chr3_1:6819526-6819545 Msa0346400:intron 25.0%
! TAATACATAACACATCATCA+CGG - chr3_1:6819618-6819637 None:intergenic 25.0%
!! CGAATTCAACTCAATTTTAT+AGG + chr3_1:6819818-6819837 Msa0346400:intron 25.0%
! CCAGAAATACTTATTTATAG+AGG - chr3_1:6819950-6819969 None:intergenic 25.0%
! CCTCTATAAATAAGTATTTC+TGG + chr3_1:6819947-6819966 Msa0346400:intron 25.0%
!! GCTTAATGACAAAATTTTGA+TGG - chr3_1:6820019-6820038 None:intergenic 25.0%
!! AAAATTTTGTCATTAAGCTG+AGG + chr3_1:6820021-6820040 Msa0346400:intron 25.0%
! CACAATGACAAAAAATTTCA+TGG - chr3_1:6820134-6820153 None:intergenic 25.0%
! CAACATAACAATAAAAGACA+AGG - chr3_1:6820360-6820379 None:intergenic 25.0%
!!! TCTTTTTTGAAGAAATCGAA+GGG + chr3_1:6820428-6820447 Msa0346400:intron 25.0%
!! TTTTCTTTGCTAATTGACAA+AGG - chr3_1:6820476-6820495 None:intergenic 25.0%
!!! GTTTTAACTTCTAACTTCTT+TGG + chr3_1:6821052-6821071 Msa0346400:intron 25.0%
! ACAACAATGTTGAAATTCAT+AGG - chr3_1:6821244-6821263 None:intergenic 25.0%
! TGAAAACAAGATTATAGTGA+AGG - chr3_1:6821780-6821799 None:intergenic 25.0%
! TTTGAGAAAAGGGAAAAATA+TGG + chr3_1:6821936-6821955 Msa0346400:CDS 25.0%
! ACAAATTATGAAGGATTTCA+AGG + chr3_1:6814034-6814053 Msa0346400:CDS 25.0%
!! AGTTTGATTTCATATTCAGT+TGG - chr3_1:6814152-6814171 None:intergenic 25.0%
! ATATGAAATCAAACTTCCAT+TGG + chr3_1:6814157-6814176 Msa0346400:CDS 25.0%
! AAAGTAAAAGATGTGTTTCA+TGG + chr3_1:6814254-6814273 Msa0346400:CDS 25.0%
!! TAAGAATGAGGAAAAGTATA+AGG + chr3_1:6822208-6822227 Msa0346400:CDS 25.0%
! AACACTTATATCAATTCTTC+CGG - chr3_1:6814333-6814352 None:intergenic 25.0%
! GATTAAGTTTAACGATAAGT+TGG + chr3_1:6822513-6822532 Msa0346400:intron 25.0%
!! ATCTTTGGAGAATTAAAAGT+AGG + chr3_1:6814934-6814953 Msa0346400:intron 25.0%
!! TCTTTGGAGAATTAAAAGTA+GGG + chr3_1:6814935-6814954 Msa0346400:intron 25.0%
!! TTCATGCATTTTATGTCTAT+AGG + chr3_1:6814966-6814985 Msa0346400:intron 25.0%
!! AGTTTTTACAAGTGAACATT+AGG - chr3_1:6814994-6815013 None:intergenic 25.0%
!! TATTTCTTTTCTTCTGAACA+TGG + chr3_1:6822945-6822964 Msa0346400:intron 25.0%
! GAGCTAAATTTATGATAGAA+TGG + chr3_1:6822993-6823012 Msa0346400:intron 25.0%
!! TTCATGTATTTTATGTCCAT+GGG + chr3_1:6823022-6823041 Msa0346400:intron 25.0%
!!! TTTTAATTCCAAAGTTTCAC+AGG - chr3_1:6823086-6823105 None:intergenic 25.0%
! ATCACAACAATGACAATATT+AGG - chr3_1:6815701-6815720 None:intergenic 25.0%
! AAGATGGTTGTAAAATTTCT+TGG + chr3_1:6815748-6815767 Msa0346400:CDS 25.0%
! AGATGGTTGTAAAATTTCTT+GGG + chr3_1:6815749-6815768 Msa0346400:CDS 25.0%
! GGGAATTTCATAAAACTTAT+TGG + chr3_1:6823673-6823692 Msa0346400:CDS 25.0%
! AACTTATTGGAAAAAGTTCT+TGG + chr3_1:6823686-6823705 Msa0346400:CDS 25.0%
! TTTGAATAAGTAATGGTTCT+TGG - chr3_1:6823716-6823735 None:intergenic 25.0%
!! GAAGACTTTTGAATAAGTAA+TGG - chr3_1:6823723-6823742 None:intergenic 25.0%
!!! CATTGCATTATTTTATGCTT+CGG + chr3_1:6824364-6824383 Msa0346400:CDS 25.0%
!!! ATTGCATTATTTTATGCTTC+GGG + chr3_1:6824365-6824384 Msa0346400:CDS 25.0%
!! CTATCATGCTTAATGTATTT+TGG - chr3_1:6816683-6816702 None:intergenic 25.0%
TAGGTTTGGATATGAGAAAA+GGG + chr3_1:6813992-6814011 Msa0346400:intron 30.0%
!! AGGGCATACAGATTTAATTT+TGG + chr3_1:6814382-6814401 Msa0346400:CDS 30.0%
!! GGGCATACAGATTTAATTTT+GGG + chr3_1:6814383-6814402 Msa0346400:CDS 30.0%
GTTGTGATTCGATATTTCTT+TGG - chr3_1:6814425-6814444 None:intergenic 30.0%
ACACATGTGAAGTAGAATAA+CGG - chr3_1:6814480-6814499 None:intergenic 30.0%
AGGAGTGAATGTAAGATTAA+GGG + chr3_1:6814618-6814637 Msa0346400:intron 30.0%
!! TAGTTTAACGATAAGTTGGT+AGG + chr3_1:6814681-6814700 Msa0346400:intron 30.0%
!! AGTTTAACGATAAGTTGGTA+GGG + chr3_1:6814682-6814701 Msa0346400:intron 30.0%
! AATTTTGCAGTTAGAGACAT+AGG + chr3_1:6814811-6814830 Msa0346400:intron 30.0%
TTCATGTATCAAACAGATGA+AGG + chr3_1:6814907-6814926 Msa0346400:intron 30.0%
! CTTTGGAGAATTAAAAGTAG+GGG + chr3_1:6814936-6814955 Msa0346400:intron 30.0%
! CAAAATATTTTCTGGATGCA+AGG - chr3_1:6815048-6815067 None:intergenic 30.0%
ATGATAATTTCTTCGATTGC+AGG - chr3_1:6815075-6815094 None:intergenic 30.0%
! TTCATGCATTTTATGTCCAT+GGG + chr3_1:6815118-6815137 Msa0346400:intron 30.0%
! TATTAATATTGGTGGATGCT+AGG - chr3_1:6815291-6815310 None:intergenic 30.0%
TAATATTGAACATTCGCATC+AGG + chr3_1:6815306-6815325 Msa0346400:intron 30.0%
! CATCTTTGTTTGGGAATAAT+GGG + chr3_1:6815568-6815587 Msa0346400:intron 30.0%
ACAACAATGACAATATTAGG+TGG - chr3_1:6815698-6815717 None:intergenic 30.0%
GCAATGAATAACATACAAGA+TGG + chr3_1:6815732-6815751 Msa0346400:CDS 30.0%
TTTGAATAAGCAATGGTTCT+TGG - chr3_1:6815890-6815909 None:intergenic 30.0%
! GAAGACTTTTGAATAAGCAA+TGG - chr3_1:6815897-6815916 None:intergenic 30.0%
GGAAAAGGATTTCTTATCAT+GGG - chr3_1:6815919-6815938 None:intergenic 30.0%
AGGAAAAGGATTTCTTATCA+TGG - chr3_1:6815920-6815939 None:intergenic 30.0%
! TCTTGGAGTGATAAACTTTT+CGG - chr3_1:6815959-6815978 None:intergenic 30.0%
TCCATTTACAAGAAGAAAGA+AGG + chr3_1:6816070-6816089 Msa0346400:CDS 30.0%
ACCTTCTTTCTTCTTGTAAA+TGG - chr3_1:6816074-6816093 None:intergenic 30.0%
TTGGGTTACATATTCAACAA+TGG + chr3_1:6816241-6816260 Msa0346400:CDS 30.0%
AACCATGAATTATATCAAGC+TGG + chr3_1:6816502-6816521 Msa0346400:CDS 30.0%
TTCCAGCTTGATATAATTCA+TGG - chr3_1:6816507-6816526 None:intergenic 30.0%
TGTTGTGGATGAAATATTGA+TGG - chr3_1:6816627-6816646 None:intergenic 30.0%
TAAACACACATTACATGTTG+TGG - chr3_1:6816642-6816661 None:intergenic 30.0%
CAACATGTAATGTGTGTTTA+AGG + chr3_1:6816642-6816661 Msa0346400:CDS 30.0%
! TAGCTTGTGATATTTGTGTT+TGG + chr3_1:6816814-6816833 Msa0346400:intron 30.0%
TAGACTGAAAAAACATGTCA+TGG + chr3_1:6816880-6816899 Msa0346400:intron 30.0%
AAAAAACATGTCATGGTGTA+TGG + chr3_1:6816887-6816906 Msa0346400:intron 30.0%
AATGCAGAAGGAGAAAAAAT+AGG - chr3_1:6817030-6817049 None:intergenic 30.0%
CAATGAAGCTAAATTTATGG+TGG - chr3_1:6817137-6817156 None:intergenic 30.0%
!!! GAATACTGTTTTTTGTGGAA+GGG + chr3_1:6817457-6817476 Msa0346400:intron 30.0%
TCTTTGTCAGTTATATTGAG+TGG + chr3_1:6817499-6817518 Msa0346400:intron 30.0%
AGAATCATGATGAATATGCA+TGG + chr3_1:6817722-6817741 Msa0346400:intron 30.0%
CCATATGTAATCATCCAATA+TGG - chr3_1:6817761-6817780 None:intergenic 30.0%
CCATATTGGATGATTACATA+TGG + chr3_1:6817758-6817777 Msa0346400:intron 30.0%
CAACATGTATATAGCTGATA+AGG - chr3_1:6817795-6817814 None:intergenic 30.0%
TGGAGAAAAACTAAACAATG+CGG + chr3_1:6818149-6818168 Msa0346400:intron 30.0%
ATTTATAGTCCAATCCTCAT+CGG + chr3_1:6818829-6818848 Msa0346400:intron 30.0%
AACAAAAATAATAGCCGATG+AGG - chr3_1:6818846-6818865 None:intergenic 30.0%
! CATAAGAAACACGTTTTCAA+AGG - chr3_1:6818939-6818958 None:intergenic 30.0%
! CTTTGAAAACGTGTTTCTTA+TGG + chr3_1:6818937-6818956 Msa0346400:intron 30.0%
ACCACACAAAATAAAAACCA+TGG + chr3_1:6819170-6819189 Msa0346400:intron 30.0%
!!! TCCATGGTTTTTATTTTGTG+TGG - chr3_1:6819174-6819193 None:intergenic 30.0%
ACAAAAGAATCCTATGTTGA+GGG - chr3_1:6819878-6819897 None:intergenic 30.0%
TACAAAAGAATCCTATGTTG+AGG - chr3_1:6819879-6819898 None:intergenic 30.0%
! CAACATAGGATTCTTTTGTA+TGG + chr3_1:6819879-6819898 Msa0346400:intron 30.0%
TACTTATTTATAGAGGTCTC+TGG - chr3_1:6819943-6819962 None:intergenic 30.0%
!!! AATTTTTTGTCATTGTGTCG+AGG + chr3_1:6820137-6820156 Msa0346400:intron 30.0%
! TTAGAGAGCAACATTTTTGA+CGG - chr3_1:6820229-6820248 None:intergenic 30.0%
!!! CTCTTTTTTGAAGAAATCGA+AGG + chr3_1:6820427-6820446 Msa0346400:intron 30.0%
! ATTTGTTACTGCATGCAAAA+AGG + chr3_1:6820616-6820635 Msa0346400:intron 30.0%
AAAGAACAAAGAAATGGAAG+AGG - chr3_1:6820672-6820691 None:intergenic 30.0%
TACAGAAGAAACTAGAATCA+CGG + chr3_1:6820722-6820741 Msa0346400:intron 30.0%
CTAAAGAAATGTAAAGCTCA+AGG - chr3_1:6821114-6821133 None:intergenic 30.0%
CTTGAGCTTTACATTTCTTT+AGG + chr3_1:6821112-6821131 Msa0346400:intron 30.0%
TTACATTTCTTTAGGTCACA+CGG + chr3_1:6821120-6821139 Msa0346400:intron 30.0%
GTTAGTTATGCTAGAATTTG+TGG + chr3_1:6821262-6821281 Msa0346400:intron 30.0%
ACCGTCATTGACATTATTTA+CGG - chr3_1:6821354-6821373 None:intergenic 30.0%
TAAATAATGTCAATGACGGT+TGG + chr3_1:6821354-6821373 Msa0346400:intron 30.0%
TAGAGGCCTTAAACAAAATT+TGG - chr3_1:6821649-6821668 None:intergenic 30.0%
AAGTTTAATAGACTTGAGTC+GGG - chr3_1:6821699-6821718 None:intergenic 30.0%
GAAGTTTAATAGACTTGAGT+CGG - chr3_1:6821700-6821719 None:intergenic 30.0%
TAGGTTTGGATTTGAGAAAA+GGG + chr3_1:6821926-6821945 Msa0346400:intron 30.0%
! AATTGATATAAGTGTTGCTG+CGG + chr3_1:6822268-6822287 Msa0346400:CDS 30.0%
TTCTCTCAATACAATAACGA+TGG - chr3_1:6822475-6822494 None:intergenic 30.0%
AGAAGTGAGTGTAAGATTAA+GGG + chr3_1:6822491-6822510 Msa0346400:intron 30.0%
!! AAGTTTAACGATAAGTTGGT+AGG + chr3_1:6822517-6822536 Msa0346400:intron 30.0%
!! AGTTTAACGATAAGTTGGTA+GGG + chr3_1:6814682-6814701 Msa0346400:intron 30.0%
TTCATGTATCAAACAGATGA+AGG + chr3_1:6814907-6814926 Msa0346400:intron 30.0%
! CTTTGGAGAATTAAAAGTAG+GGG + chr3_1:6814936-6814955 Msa0346400:intron 30.0%
ACAAAATACACGTGAACATT+AGG - chr3_1:6822743-6822762 None:intergenic 30.0%
ATGATAATTTCTTCGATTGC+AGG - chr3_1:6815075-6815094 None:intergenic 30.0%
ATATGACATGTATCAACCTT+AGG + chr3_1:6822787-6822806 Msa0346400:intron 30.0%
!! TTTTATTCTAGAGACAGCAA+GGG - chr3_1:6822843-6822862 None:intergenic 30.0%
!! TTTTTATTCTAGAGACAGCA+AGG - chr3_1:6822844-6822863 None:intergenic 30.0%
AAACTAAAAAACACACAGAG+TGG - chr3_1:6822916-6822935 None:intergenic 30.0%
! GTTCATGTATTTTATGTCCA+TGG + chr3_1:6823021-6823040 Msa0346400:intron 30.0%
GAGTTGGAAACAATAAAAGA+GGG - chr3_1:6823145-6823164 None:intergenic 30.0%
! TGAGTTGGAAACAATAAAAG+AGG - chr3_1:6823146-6823165 None:intergenic 30.0%
CTCGTATAAATATGAGTTGT+TGG + chr3_1:6823215-6823234 Msa0346400:intron 30.0%
AACGCTTTCAATAGCAATAT+TGG - chr3_1:6823252-6823271 None:intergenic 30.0%
!!! TTTTTTTCGACCTATTCTGA+AGG + chr3_1:6823317-6823336 Msa0346400:intron 30.0%
!!! TTTTTTCGACCTATTCTGAA+GGG + chr3_1:6823318-6823337 Msa0346400:intron 30.0%
AGAATGTTAATTTCCATGTG+AGG + chr3_1:6823392-6823411 Msa0346400:intron 30.0%
GAATGTTAATTTCCATGTGA+GGG + chr3_1:6823393-6823412 Msa0346400:intron 30.0%
ACAACAATGACAATATTAGG+TGG - chr3_1:6815698-6815717 None:intergenic 30.0%
GCAATGAATAACATACAAGA+TGG + chr3_1:6815732-6815751 Msa0346400:CDS 30.0%
GGAAAAGGATTTCTTATCAT+GGG - chr3_1:6815919-6815938 None:intergenic 30.0%
AGGAAAAGGATTTCTTATCA+TGG - chr3_1:6815920-6815939 None:intergenic 30.0%
TCCATTTACAAGAAGAAAGA+AGG + chr3_1:6816070-6816089 Msa0346400:CDS 30.0%
ACCTTCTTTCTTCTTGTAAA+TGG - chr3_1:6816074-6816093 None:intergenic 30.0%
TTCCATCTTGACAAAATTCA+TGG - chr3_1:6824333-6824352 None:intergenic 30.0%
! TTTTGTCAAGATGGAAACTT+TGG + chr3_1:6824337-6824356 Msa0346400:CDS 30.0%
TTTGTCAAGATGGAAACTTT+GGG + chr3_1:6824338-6824357 Msa0346400:CDS 30.0%
!! TTGCATTATTTTATGCTTCG+GGG + chr3_1:6824366-6824385 Msa0346400:CDS 30.0%
TGTTGTGGATGAAATATTGA+TGG - chr3_1:6816627-6816646 None:intergenic 30.0%
TAAACACACTTTACATGTTG+TGG - chr3_1:6824468-6824487 None:intergenic 30.0%
ACAACATGTAAAGTGTGTTT+AGG + chr3_1:6824467-6824486 Msa0346400:CDS 30.0%
CAACATGTAAAGTGTGTTTA+GGG + chr3_1:6824468-6824487 Msa0346400:CDS 30.0%
AACATGTAAAGTGTGTTTAG+GGG + chr3_1:6824469-6824488 Msa0346400:CDS 30.0%
GTAGGTTTGGATATGAGAAA+AGG + chr3_1:6813991-6814010 Msa0346400:intron 35.0%
! ATTAAGAGTGTACGAGTTGT+TGG + chr3_1:6814085-6814104 Msa0346400:CDS 35.0%
! GATGATGATGAACAACAAGA+AGG + chr3_1:6814191-6814210 Msa0346400:CDS 35.0%
TCGATATTTCTTTGGCAAGA+AGG - chr3_1:6814417-6814436 None:intergenic 35.0%
ATGTGAAGTAGAATAACGGT+AGG - chr3_1:6814476-6814495 None:intergenic 35.0%
TCCTCTCAATTCAATAACGA+CGG - chr3_1:6814602-6814621 None:intergenic 35.0%
GAGGAGTGAATGTAAGATTA+AGG + chr3_1:6814617-6814636 Msa0346400:intron 35.0%
! CACTTTGCATTTGTTGAGTA+TGG + chr3_1:6814654-6814673 Msa0346400:intron 35.0%
ATATTTCCCCTAAACCTTGA+GGG - chr3_1:6814709-6814728 None:intergenic 35.0%
TATATTTCCCCTAAACCTTG+AGG - chr3_1:6814710-6814729 None:intergenic 35.0%
ACAGATGAAGGCTATATCTT+TGG + chr3_1:6814919-6814938 Msa0346400:intron 35.0%
! GTTCATGCATTTTATGTCCA+TGG + chr3_1:6815117-6815136 Msa0346400:intron 35.0%
! TCATAGTTAGTCTCATCCTT+AGG + chr3_1:6815212-6815231 Msa0346400:intron 35.0%
AGACAACAAGGGATAAAAGA+GGG - chr3_1:6815241-6815260 None:intergenic 35.0%
ATACGAGAAACAGACAACAA+GGG - chr3_1:6815252-6815271 None:intergenic 35.0%
TATACGAGAAACAGACAACA+AGG - chr3_1:6815253-6815272 None:intergenic 35.0%
TTTCTTTCGACCTATTCTGA+AGG + chr3_1:6815356-6815375 Msa0346400:intron 35.0%
TTCTTTCGACCTATTCTGAA+GGG + chr3_1:6815357-6815376 Msa0346400:intron 35.0%
CCATTATTCCCAAACAAAGA+TGG - chr3_1:6815570-6815589 None:intergenic 35.0%
! CCATCTTTGTTTGGGAATAA+TGG + chr3_1:6815567-6815586 Msa0346400:intron 35.0%
TTGTCATTGTTGTGATACAC+AGG + chr3_1:6815705-6815724 Msa0346400:intron 35.0%
TGTCATTGTTGTGATACACA+GGG + chr3_1:6815706-6815725 Msa0346400:intron 35.0%
GTTTGTATGTCTATCAGTCT+CGG + chr3_1:6816210-6816229 Msa0346400:intron 35.0%
ATTCAACAATGGAAAGTCCA+TGG + chr3_1:6816252-6816271 Msa0346400:CDS 35.0%
ACAAAGTCAACAATCTTCCA+TGG - chr3_1:6816272-6816291 None:intergenic 35.0%
TATATACGTTGTCACTGACA+AGG + chr3_1:6816307-6816326 Msa0346400:CDS 35.0%
AGTGATTCATATTTCTTCCG+AGG + chr3_1:6816448-6816467 Msa0346400:intron 35.0%
CTTTAGACATCTACACTATG+AGG + chr3_1:6816748-6816767 Msa0346400:CDS 35.0%
CAATAACCAGATTACTCAAC+TGG - chr3_1:6816785-6816804 None:intergenic 35.0%
!!! TCTGTGGTTGTGTTTTGTTT+TGG + chr3_1:6816984-6817003 Msa0346400:intron 35.0%
TATTACTACTAGCGGAAAGA+CGG + chr3_1:6817187-6817206 Msa0346400:intron 35.0%
!!! GGAATACTGTTTTTTGTGGA+AGG + chr3_1:6817456-6817475 Msa0346400:intron 35.0%
GTTTGATCTTTGGTTATCAG+AGG + chr3_1:6817601-6817620 Msa0346400:intron 35.0%
TTGGTTATCAGAGGTAAAAG+AGG + chr3_1:6817610-6817629 Msa0346400:intron 35.0%
TGGTTATCAGAGGTAAAAGA+GGG + chr3_1:6817611-6817630 Msa0346400:intron 35.0%
ATAGGTTGTTCTGATATCAC+TGG + chr3_1:6817676-6817695 Msa0346400:intron 35.0%
ATGATGAATATGCATGGTCA+TGG + chr3_1:6817728-6817747 Msa0346400:intron 35.0%
! ACATGTTGTGTTTTGTGACA+TGG + chr3_1:6817807-6817826 Msa0346400:intron 35.0%
! TATAAGCACACATTTGGGTT+GGG - chr3_1:6817905-6817924 None:intergenic 35.0%
TTATAAGCACACATTTGGGT+TGG - chr3_1:6817906-6817925 None:intergenic 35.0%
ATTCTGATTTCTGATGCAGA+GGG + chr3_1:6818115-6818134 Msa0346400:intron 35.0%
GGAGAAAAACTAAACAATGC+GGG + chr3_1:6818150-6818169 Msa0346400:intron 35.0%
AAATAATAGCCGATGAGGAT+TGG - chr3_1:6818841-6818860 None:intergenic 35.0%
ACCTATTTATAGAGGTCACT+GGG - chr3_1:6819128-6819147 None:intergenic 35.0%
! GGTTTCTGGATATGAAAACA+GGG - chr3_1:6819153-6819172 None:intergenic 35.0%
! TGGTTTCTGGATATGAAAAC+AGG - chr3_1:6819154-6819173 None:intergenic 35.0%
! ATCAAAGACAGAGTTTTCCA+TGG - chr3_1:6819190-6819209 None:intergenic 35.0%
TTTGATCCAAACACCAAACT+AGG + chr3_1:6819204-6819223 Msa0346400:intron 35.0%
CTAACTCTTCAACCTGAAAA+GGG - chr3_1:6819289-6819308 None:intergenic 35.0%
TCTAAACTAATGTCTTCGTG+TGG - chr3_1:6819591-6819610 None:intergenic 35.0%
AATCCTATGTTGAGGGATTT+CGG - chr3_1:6819871-6819890 None:intergenic 35.0%
! AATGCACCAACATTTTTCTG+TGG + chr3_1:6819907-6819926 Msa0346400:intron 35.0%
!!! GCTGAGGATTTTTTTTAACG+TGG + chr3_1:6820037-6820056 Msa0346400:intron 35.0%
CTCTCTAATTGAATACCAAG+AGG + chr3_1:6820241-6820260 Msa0346400:intron 35.0%
CTGAGATATTTATATCGCCA+AGG - chr3_1:6820291-6820310 None:intergenic 35.0%
GGCGATATAAATATCTCAGT+TGG + chr3_1:6820292-6820311 Msa0346400:intron 35.0%
TGAAGAAATCGAAGGGTTAA+CGG + chr3_1:6820435-6820454 Msa0346400:intron 35.0%
CCTGTATGACAAATAAACAG+TGG - chr3_1:6820799-6820818 None:intergenic 35.0%
CCACTGTTTATTTGTCATAC+AGG + chr3_1:6820796-6820815 Msa0346400:intron 35.0%
! TCAATTAAAGTGGGTTCAGA+TGG + chr3_1:6821009-6821028 Msa0346400:intron 35.0%
AAGAAATGTAAAGCTCAAGG+AGG - chr3_1:6821111-6821130 None:intergenic 35.0%
GACGAAATGCCAATAACAAT+TGG + chr3_1:6821161-6821180 Msa0346400:intron 35.0%
GTAGGGTTTCCAATTGTTAT+TGG - chr3_1:6821173-6821192 None:intergenic 35.0%
GCCGTAAATAATGTCAATGA+CGG + chr3_1:6821350-6821369 Msa0346400:intron 35.0%
! TTTAAGGCCTCTAGATTTGT+TGG + chr3_1:6821656-6821675 Msa0346400:intron 35.0%
! TTAAGGCCTCTAGATTTGTT+GGG + chr3_1:6821657-6821676 Msa0346400:intron 35.0%
GATTATAGTGAAGGAAGAGA+AGG - chr3_1:6821771-6821790 None:intergenic 35.0%
AAGAGCTTCTTCATCTTGAA+GGG - chr3_1:6821867-6821886 None:intergenic 35.0%
TAAGAGCTTCTTCATCTTGA+AGG - chr3_1:6821868-6821887 None:intergenic 35.0%
AAGATGAAGAAGCTCTTAGT+TGG + chr3_1:6821870-6821889 Msa0346400:CDS 35.0%
GTAGGTTTGGATTTGAGAAA+AGG + chr3_1:6821925-6821944 Msa0346400:intron 35.0%
! ATTAAGAGTGTACGAGTTGT+TGG + chr3_1:6814085-6814104 Msa0346400:CDS 35.0%
TGTGTTTCATGGTAAGAATG+AGG + chr3_1:6822196-6822215 Msa0346400:CDS 35.0%
ATTGTTAAGGATTTCAAGGC+CGG + chr3_1:6822242-6822261 Msa0346400:CDS 35.0%
AAATTAAATCCGTATGCCCT+TGG - chr3_1:6822313-6822332 None:intergenic 35.0%
!! AGGGCATACGGATTTAATTT+TGG + chr3_1:6822313-6822332 Msa0346400:CDS 35.0%
!! GGGCATACGGATTTAATTTT+GGG + chr3_1:6822314-6822333 Msa0346400:CDS 35.0%
TCGATATTTCTTTGGCAAGA+AGG - chr3_1:6814417-6814436 None:intergenic 35.0%
GGTGTGATTCGATATTTCTT+TGG - chr3_1:6822356-6822375 None:intergenic 35.0%
AATAATGGTAGGCTACTAAC+CGG - chr3_1:6822396-6822415 None:intergenic 35.0%
GAGAAGTGAGTGTAAGATTA+AGG + chr3_1:6822490-6822509 Msa0346400:intron 35.0%
ATATTTCCCCTAAACCTTGA+AGG - chr3_1:6814709-6814728 None:intergenic 35.0%
ACAGATGAAGGCTATATCTT+TGG + chr3_1:6814919-6814938 Msa0346400:intron 35.0%
TGAGTGTCAAATGAATCCTA+AGG - chr3_1:6822806-6822825 None:intergenic 35.0%
CTATCAAGACAGTTCTTATC+AGG - chr3_1:6823060-6823079 None:intergenic 35.0%
GATAGTTTCCTGTGAAACTT+TGG + chr3_1:6815171-6815190 Msa0346400:intron 35.0%
! TCATAGTTAGTCTCATCCTT+AGG + chr3_1:6815212-6815231 Msa0346400:intron 35.0%
CAATAAAAGAGGGAATCCTA+AGG - chr3_1:6823135-6823154 None:intergenic 35.0%
ATACGAGAAAGAGACAACAA+GGG - chr3_1:6823202-6823221 None:intergenic 35.0%
TATACGAGAAAGAGACAACA+AGG - chr3_1:6823203-6823222 None:intergenic 35.0%
GCTTTCAATAGCAATATTGG+TGG - chr3_1:6823249-6823268 None:intergenic 35.0%
TTGTCATTGTTGTGATACAC+AGG + chr3_1:6815705-6815724 Msa0346400:intron 35.0%
TGTCATTGTTGTGATACACA+GGG + chr3_1:6815706-6815725 Msa0346400:intron 35.0%
! CCTTGGAGTGATAAACTTTT+CGG - chr3_1:6823785-6823804 None:intergenic 35.0%
AGTTTGTATGTCTATCAGTC+TGG + chr3_1:6816209-6816228 Msa0346400:intron 35.0%
TGTCTATCAGTCTGGAAATT+TGG + chr3_1:6824043-6824062 Msa0346400:CDS 35.0%
GTCTATCAGTCTGGAAATTT+GGG + chr3_1:6824044-6824063 Msa0346400:CDS 35.0%
CTGGGTTACATATTCAACAA+TGG + chr3_1:6824067-6824086 Msa0346400:CDS 35.0%
ATTCAACAATGGAAAGTCCA+TGG + chr3_1:6816252-6816271 Msa0346400:CDS 35.0%
AGTGATTCATATTGCTTCAG+AGG + chr3_1:6824274-6824293 Msa0346400:CDS 35.0%
! AGCCATGAATTTTGTCAAGA+TGG + chr3_1:6824328-6824347 Msa0346400:CDS 35.0%
!! TGCATTATTTTATGCTTCGG+GGG + chr3_1:6824367-6824386 Msa0346400:CDS 35.0%
CTTTAGACATCTACACTATG+AGG + chr3_1:6816748-6816767 Msa0346400:CDS 35.0%
GAGAGCTTCTTCATCTTGAA+GGG - chr3_1:6813933-6813952 None:intergenic 40.0%
TGAGAGCTTCTTCATCTTGA+AGG - chr3_1:6813934-6813953 None:intergenic 40.0%
AAGATGAAGAAGCTCTCAGT+TGG + chr3_1:6813936-6813955 Msa0346400:exon 40.0%
TCATCATCGTCTCGATCTAA+TGG - chr3_1:6814176-6814195 None:intergenic 40.0%
! AGAGTGAATGAGCTGTTTCA+AGG + chr3_1:6814362-6814381 Msa0346400:CDS 40.0%
! GAGTGAATGAGCTGTTTCAA+GGG + chr3_1:6814363-6814382 Msa0346400:CDS 40.0%
AATCACAACTTCAGTTCAGC+TGG + chr3_1:6814436-6814455 Msa0346400:CDS 40.0%
TCCGTCGTTATTGAATTGAG+AGG + chr3_1:6814598-6814617 Msa0346400:intron 40.0%
! CAGGAAACATTAGTTTCCCA+TGG - chr3_1:6815137-6815156 None:intergenic 40.0%
CTATCAAGACAGTTCTTGTC+AGG - chr3_1:6815156-6815175 None:intergenic 40.0%
GGATAAAAGAGGGAATCCTA+AGG - chr3_1:6815231-6815250 None:intergenic 40.0%
CAGACAACAAGGGATAAAAG+AGG - chr3_1:6815242-6815261 None:intergenic 40.0%
CGTATTCTTCCCTTCAGAAT+AGG - chr3_1:6815369-6815388 None:intergenic 40.0%
! TGTTGGTGTCCATCTTTGTT+TGG + chr3_1:6815558-6815577 Msa0346400:intron 40.0%
! GTTGGTGTCCATCTTTGTTT+GGG + chr3_1:6815559-6815578 Msa0346400:intron 40.0%
GTCATTGTTGTGATACACAG+GGG + chr3_1:6815707-6815726 Msa0346400:intron 40.0%
ATGCTTGATCTCATTTCCAG+AGG + chr3_1:6815774-6815793 Msa0346400:CDS 40.0%
AGCTATGCTGATGAAGGAAA+AGG - chr3_1:6815934-6815953 None:intergenic 40.0%
CCAGAATTGATTGATCGTCT+TGG - chr3_1:6815976-6815995 None:intergenic 40.0%
CCAAGACGATCAATCAATTC+TGG + chr3_1:6815973-6815992 Msa0346400:intron 40.0%
AGCGGATATTTGATCATGAC+AGG + chr3_1:6816020-6816039 Msa0346400:CDS 40.0%
GCGGATATTTGATCATGACA+GGG + chr3_1:6816021-6816040 Msa0346400:CDS 40.0%
CGGATATTTGATCATGACAG+GGG + chr3_1:6816022-6816041 Msa0346400:CDS 40.0%
TACCATGTCTTACTTGCCTT+TGG + chr3_1:6816137-6816156 Msa0346400:CDS 40.0%
GTCGCTTCATGTAAAAGTTC+TGG + chr3_1:6816185-6816204 Msa0346400:CDS 40.0%
TGTCTATCAGTCTCGGAATT+TGG + chr3_1:6816217-6816236 Msa0346400:intron 40.0%
GTCTATCAGTCTCGGAATTT+GGG + chr3_1:6816218-6816237 Msa0346400:intron 40.0%
CAAGTCAAGTACACCTATGT+TGG - chr3_1:6816333-6816352 None:intergenic 40.0%
AGTGAGGTAGATGTTACATC+GGG - chr3_1:6816395-6816414 None:intergenic 40.0%
GAGTGAGGTAGATGTTACAT+CGG - chr3_1:6816396-6816415 None:intergenic 40.0%
!! CAATGCATAGAAGTATTCCC+CGG - chr3_1:6816561-6816580 None:intergenic 40.0%
TAGACATCTACACTATGAGG+TGG + chr3_1:6816751-6816770 Msa0346400:CDS 40.0%
CTTTCTCCAGTTGAGTAATC+TGG + chr3_1:6816776-6816795 Msa0346400:intron 40.0%
CAAAACACAACCACAGAAGA+TGG - chr3_1:6816981-6817000 None:intergenic 40.0%
ATTACTACTAGCGGAAAGAC+GGG + chr3_1:6817188-6817207 Msa0346400:intron 40.0%
AAAGAACGGAGTAGAAAGAG+CGG - chr3_1:6817233-6817252 None:intergenic 40.0%
CAGAGGTAAAAGAGGGTTAA+CGG + chr3_1:6817618-6817637 Msa0346400:intron 40.0%
AATATGCATGGTCATGGTGA+TGG + chr3_1:6817734-6817753 Msa0346400:intron 40.0%
ATATGCATGGTCATGGTGAT+GGG + chr3_1:6817735-6817754 Msa0346400:intron 40.0%
GATTCTGATTTCTGATGCAG+AGG + chr3_1:6818114-6818133 Msa0346400:intron 40.0%
ACTCATAGACTCGTGTTCAA+AGG + chr3_1:6818883-6818902 Msa0346400:intron 40.0%
!!! GACTCTGCCATTTTTTTGGA+CGG - chr3_1:6818972-6818991 None:intergenic 40.0%
!!! TTCGGACTCTGCCATTTTTT+TGG - chr3_1:6818976-6818995 None:intergenic 40.0%
CAGAAACTGTTAGTGCAATG+TGG - chr3_1:6819093-6819112 None:intergenic 40.0%
CATTGCACTAACAGTTTCTG+TGG + chr3_1:6819093-6819112 Msa0346400:intron 40.0%
CACCTATTTATAGAGGTCAC+TGG - chr3_1:6819129-6819148 None:intergenic 40.0%
ACAGGGACACCTATTTATAG+AGG - chr3_1:6819136-6819155 None:intergenic 40.0%
GTAGTAAACTGCACCTAGTT+TGG - chr3_1:6819220-6819239 None:intergenic 40.0%
GCTAACTCTTCAACCTGAAA+AGG - chr3_1:6819290-6819309 None:intergenic 40.0%
TGCATCTGTAGTTGAGTTCA+AGG - chr3_1:6819326-6819345 None:intergenic 40.0%
AGAACCATGTTCTCCATCTT+TGG + chr3_1:6819444-6819463 Msa0346400:intron 40.0%
GATAAAGTTTGATCCGGTCA+AGG + chr3_1:6819532-6819551 Msa0346400:intron 40.0%
AAGGAACTACGAAGAGATCA+GGG + chr3_1:6819551-6819570 Msa0346400:intron 40.0%
AACTAATGTCTTCGTGTGGT+GGG - chr3_1:6819587-6819606 None:intergenic 40.0%
AAACTAATGTCTTCGTGTGG+TGG - chr3_1:6819588-6819607 None:intergenic 40.0%
TATCCGAAATCCCTCAACAT+AGG + chr3_1:6819865-6819884 Msa0346400:intron 40.0%
TGTGGACCACAGAAAAATGT+TGG - chr3_1:6819916-6819935 None:intergenic 40.0%
TGTTGAAGATCTTCATCACG+CGG - chr3_1:6820089-6820108 None:intergenic 40.0%
! ACATTTTTGACGGCATGCTA+AGG - chr3_1:6820219-6820238 None:intergenic 40.0%
GTTTCCTATGAGCTAGATCT+TGG + chr3_1:6820263-6820282 Msa0346400:intron 40.0%
GAAGAAATCGAAGGGTTAAC+GGG + chr3_1:6820436-6820455 Msa0346400:intron 40.0%
GGAAGAGGAAGATTAACGAA+AGG - chr3_1:6820657-6820676 None:intergenic 40.0%
GTGGCTTCTTCTTCTTCATT+TGG - chr3_1:6820780-6820799 None:intergenic 40.0%
GGTATGTAGTATCATAGACG+TGG + chr3_1:6821030-6821049 Msa0346400:intron 40.0%
TAGGTCAGACACACTAAGTA+GGG - chr3_1:6821225-6821244 None:intergenic 40.0%
ATAGGTCAGACACACTAAGT+AGG - chr3_1:6821226-6821245 None:intergenic 40.0%
GCTAGAATTTGTGGACCATA+TGG + chr3_1:6821271-6821290 Msa0346400:intron 40.0%
CTGTTGTGTCATGACATCTT+TGG + chr3_1:6821414-6821433 Msa0346400:intron 40.0%
GAAGCATACTGTTGTATCTG+CGG - chr3_1:6821747-6821766 None:intergenic 40.0%
AGGCTGAAAGAATTGATGCT+AGG + chr3_1:6814054-6814073 Msa0346400:CDS 40.0%
GGCTGAAAGAATTGATGCTA+GGG + chr3_1:6814055-6814074 Msa0346400:CDS 40.0%
! CAGGATACATTAGTTTCCCA+TGG - chr3_1:6823041-6823060 None:intergenic 40.0%
GCGTTATGAACACTCACATT+AGG + chr3_1:6823267-6823286 Msa0346400:intron 40.0%
TTTCCATGTGAGGGTGAAAA+TGG + chr3_1:6823402-6823421 Msa0346400:intron 40.0%
GTCATTGTTGTGATACACAG+GGG + chr3_1:6815707-6815726 Msa0346400:intron 40.0%
GTCATCGAAATCTAGATCTC+TGG - chr3_1:6823619-6823638 None:intergenic 40.0%
AGCTATGCTGATGAAGGAAA+AGG - chr3_1:6815934-6815953 None:intergenic 40.0%
CCGAAAAGTTTATCACTCCA+AGG + chr3_1:6815956-6815975 Msa0346400:intron 40.0%
AGCGGATATTTGATCATGAC+AGG + chr3_1:6816020-6816039 Msa0346400:CDS 40.0%
GCGGATATTTGATCATGACA+GGG + chr3_1:6816021-6816040 Msa0346400:CDS 40.0%
CGGATATTTGATCATGACAG+GGG + chr3_1:6816022-6816041 Msa0346400:CDS 40.0%
! TACCATGTCTTGCTTGCTTT+TGG + chr3_1:6823963-6823982 Msa0346400:CDS 40.0%
GTCGCTTCATGTAAAAGTTC+TGG + chr3_1:6816185-6816204 Msa0346400:CDS 40.0%
AACAATGGAAAGTCCATGGA+AGG + chr3_1:6816256-6816275 Msa0346400:CDS 40.0%
ACAAAGTCAACAACCTTCCA+TGG - chr3_1:6824098-6824117 None:intergenic 40.0%
TATATACGTTGTCACCGACA+AGG + chr3_1:6824133-6824152 Msa0346400:CDS 40.0%
CAAGTCAAGTACACCTATGT+TGG - chr3_1:6816333-6816352 None:intergenic 40.0%
AGTGAGGTAGATGTTACATC+GGG - chr3_1:6816395-6816414 None:intergenic 40.0%
GAGTGAGGTAGATGTTACAT+CGG - chr3_1:6816396-6816415 None:intergenic 40.0%
TAGACATCTACACTATGAGG+TGG + chr3_1:6816751-6816770 Msa0346400:CDS 40.0%
TACTCGCAGCAGTAAAACGT+AGG + chr3_1:6813973-6813992 Msa0346400:intron 45.0%
GCAGCAGTAAAACGTAGGTT+TGG + chr3_1:6813978-6813997 Msa0346400:intron 45.0%
AGAGTGTACGAGTTGTTGGA+CGG + chr3_1:6814089-6814108 Msa0346400:CDS 45.0%
ACTTCAGTTCAGCTGGACAT+TGG + chr3_1:6814443-6814462 Msa0346400:CDS 45.0%
GTCATCGAAATCTAGACCTC+TGG - chr3_1:6815793-6815812 None:intergenic 45.0%
TGGTGTGTGCAAGAATTGGA+GGG + chr3_1:6815827-6815846 Msa0346400:CDS 45.0%
TTCTGGCACGTTGCTTATTC+TGG + chr3_1:6815990-6816009 Msa0346400:CDS 45.0%
! GCTTATTCTGGCTGTTCTAG+CGG + chr3_1:6816002-6816021 Msa0346400:CDS 45.0%
TGCCAAAGGCAAGTAAGACA+TGG - chr3_1:6816142-6816161 None:intergenic 45.0%
GTCTTACTTGCCTTTGGCAA+AGG + chr3_1:6816143-6816162 Msa0346400:CDS 45.0%
ACTTGCCTTTGGCAAAGGAT+CGG + chr3_1:6816148-6816167 Msa0346400:CDS 45.0%
ATCAGTCTCGGAATTTGGGT+TGG + chr3_1:6816222-6816241 Msa0346400:intron 45.0%
! TCAGTCTCGGAATTTGGGTT+GGG + chr3_1:6816223-6816242 Msa0346400:intron 45.0%
TAACATCTACCTCACTCCTC+AGG + chr3_1:6816399-6816418 Msa0346400:CDS 45.0%
CATCACAACTAACCATCCTG+AGG - chr3_1:6816418-6816437 None:intergenic 45.0%
! CTCAGGATGGTTAGTTGTGA+TGG + chr3_1:6816416-6816435 Msa0346400:intron 45.0%
TTTCAAAACCCCACCTTCTC+GGG - chr3_1:6816589-6816608 None:intergenic 45.0%
CTTTCAAAACCCCACCTTCT+CGG - chr3_1:6816590-6816609 None:intergenic 45.0%
TAGAACTCGAGTTCCTCCAA+AGG + chr3_1:6816700-6816719 Msa0346400:CDS 45.0%
! AAGTAGGCGTTTTCCTTTGG+AGG - chr3_1:6816716-6816735 None:intergenic 45.0%
! AGCAAGTAGGCGTTTTCCTT+TGG - chr3_1:6816719-6816738 None:intergenic 45.0%
AAAGGAAAACGCCTACTTGC+TGG + chr3_1:6816718-6816737 Msa0346400:CDS 45.0%
! AAAACGCCTACTTGCTGGAT+TGG + chr3_1:6816723-6816742 Msa0346400:CDS 45.0%
! AAAGCACCAATCCAGCAAGT+AGG - chr3_1:6816732-6816751 None:intergenic 45.0%
AACGACTGAACCATCTTCTG+TGG + chr3_1:6816968-6816987 Msa0346400:intron 45.0%
CAGACCACCGTCCAAAAAAA+TGG + chr3_1:6818962-6818981 Msa0346400:intron 45.0%
!!! TCTGCCATTTTTTTGGACGG+TGG - chr3_1:6818969-6818988 None:intergenic 45.0%
ACTAACAGTTTCTGTGGTCG+AGG + chr3_1:6819099-6819118 Msa0346400:intron 45.0%
GCCCAGTGACCTCTATAAAT+AGG + chr3_1:6819124-6819143 Msa0346400:intron 45.0%
!! ACTGCACCTAGTTTGGTGTT+TGG - chr3_1:6819213-6819232 None:intergenic 45.0%
GTGCAGTTTACTACAACCGA+GGG + chr3_1:6819226-6819245 Msa0346400:intron 45.0%
TGAAAAGGGTGACATCAGTG+GGG - chr3_1:6819275-6819294 None:intergenic 45.0%
CTGAAAAGGGTGACATCAGT+GGG - chr3_1:6819276-6819295 None:intergenic 45.0%
ACTCAACTACAGATGCACAC+AGG + chr3_1:6819329-6819348 Msa0346400:intron 45.0%
CTCAACTACAGATGCACACA+GGG + chr3_1:6819330-6819349 Msa0346400:intron 45.0%
!! TGGAGAACATGGTTCTGACA+TGG - chr3_1:6819440-6819459 None:intergenic 45.0%
! AGTACTGAACTGGCCAAAGA+TGG - chr3_1:6819460-6819479 None:intergenic 45.0%
TTTGGCCAGTTCAGTACTAG+AGG + chr3_1:6819462-6819481 Msa0346400:intron 45.0%
TTGGCCAGTTCAGTACTAGA+GGG + chr3_1:6819463-6819482 Msa0346400:intron 45.0%
TCTCTTCGTAGTTCCTTGAC+CGG - chr3_1:6819548-6819567 None:intergenic 45.0%
CAAGGAACTACGAAGAGATC+AGG + chr3_1:6819550-6819569 Msa0346400:intron 45.0%
GGTGTGTTTGTGTGTTTAGC+TGG - chr3_1:6819988-6820007 None:intergenic 45.0%
CTAGCTCATAGGAAACCTCT+TGG - chr3_1:6820259-6820278 None:intergenic 45.0%
AACCCTACACACACAAGTAG+AGG + chr3_1:6821185-6821204 Msa0346400:intron 45.0%
CTCCTCTACTTGTGTGTGTA+GGG - chr3_1:6821190-6821209 None:intergenic 45.0%
TACACACACAAGTAGAGGAG+CGG + chr3_1:6821190-6821209 Msa0346400:intron 45.0%
TTGGCTAAACCACATTGTCG+TGG + chr3_1:6821383-6821402 Msa0346400:intron 45.0%
TGGCTAAACCACATTGTCGT+GGG + chr3_1:6821384-6821403 Msa0346400:intron 45.0%
! AGTTTAGGTGAGTTGAGCTC+CGG - chr3_1:6821497-6821516 None:intergenic 45.0%
TACTCGCAGCAGTAAAACGT+AGG + chr3_1:6813973-6813992 Msa0346400:intron 45.0%
GCAGCAGTAAAACGTAGGTT+TGG + chr3_1:6813978-6813997 Msa0346400:intron 45.0%
AGAGTGTACGAGTTGTTGGA+CGG + chr3_1:6814089-6814108 Msa0346400:CDS 45.0%
! GACGATGATGACGAACTACA+AGG + chr3_1:6822122-6822141 Msa0346400:CDS 45.0%
!! TAAGTTGGTAGGGTCCTTCA+AGG + chr3_1:6822528-6822547 Msa0346400:intron 45.0%
GTAGGGTCCTTCAAGGTTTA+GGG + chr3_1:6822535-6822554 Msa0346400:intron 45.0%
TAGGGTCCTTCAAGGTTTAG+GGG + chr3_1:6822536-6822555 Msa0346400:intron 45.0%
AGAGACAGCAAGGGAGAAAT+TGG - chr3_1:6822834-6822853 None:intergenic 45.0%
! GGATGAGAAGTATGCTGAGT+TGG - chr3_1:6823161-6823180 None:intergenic 45.0%
GGGACATAGTGAGTATGAGT+TGG - chr3_1:6823182-6823201 None:intergenic 45.0%
! TAGCAATATTGGTGGATGCG+AGG - chr3_1:6823241-6823260 None:intergenic 45.0%
ACTCGTCTTCCCTTCAGAAT+AGG - chr3_1:6823330-6823349 None:intergenic 45.0%
!! TAGCCATTTTCACCCTCACA+TGG - chr3_1:6823408-6823427 None:intergenic 45.0%
GATGACCTCTTTCAATTCGC+TGG + chr3_1:6823633-6823652 Msa0346400:CDS 45.0%
ACACACCAGCGAATTGAAAG+AGG - chr3_1:6823641-6823660 None:intergenic 45.0%
TGGTGTGTGCAAGAATTGGA+GGG + chr3_1:6815827-6815846 Msa0346400:CDS 45.0%
CCAGAATTGATTGATCGCCT+TGG - chr3_1:6823802-6823821 None:intergenic 45.0%
CCAAGGCGATCAATCAATTC+TGG + chr3_1:6823799-6823818 Msa0346400:CDS 45.0%
TTCTGGCACGTTGCTTATTC+TGG + chr3_1:6815990-6816009 Msa0346400:CDS 45.0%
! GCTTATTCTGGCTGTTCTAG+CGG + chr3_1:6816002-6816021 Msa0346400:CDS 45.0%
TGCCAAAAGCAAGCAAGACA+TGG - chr3_1:6823968-6823987 None:intergenic 45.0%
!! GTCTTGCTTGCTTTTGGCAA+AGG + chr3_1:6823969-6823988 Msa0346400:CDS 45.0%
ATCAGTCTGGAAATTTGGGC+TGG + chr3_1:6824048-6824067 Msa0346400:CDS 45.0%
TCAGTCTGGAAATTTGGGCT+GGG + chr3_1:6824049-6824068 Msa0346400:CDS 45.0%
!! TACACCTATGTTGGCCTTGT+CGG - chr3_1:6816324-6816343 None:intergenic 45.0%
TAACATCTACCTCACTCCTC+AGG + chr3_1:6816399-6816418 Msa0346400:CDS 45.0%
CATCACAACTAACCATCCTG+AGG - chr3_1:6816418-6816437 None:intergenic 45.0%
! CTCAGGATGGTTAGTTGTGA+TGG + chr3_1:6816416-6816435 Msa0346400:intron 45.0%
TTTCAAAACCCCACCTTCTC+GGG - chr3_1:6816589-6816608 None:intergenic 45.0%
CTTTCAAAACCCCACCTTCT+CGG - chr3_1:6816590-6816609 None:intergenic 45.0%
TAGAACTCGAGTTCCTCCAA+AGG + chr3_1:6816700-6816719 Msa0346400:CDS 45.0%
! AAGTAGGCGTTTTCCTTTGG+AGG - chr3_1:6816716-6816735 None:intergenic 45.0%
! AGCAAGTAGGCGTTTTCCTT+TGG - chr3_1:6816719-6816738 None:intergenic 45.0%
AAAGGAAAACGCCTACTTGC+TGG + chr3_1:6816718-6816737 Msa0346400:CDS 45.0%
! AAAACGCCTACTTGCTGGAT+TGG + chr3_1:6816723-6816742 Msa0346400:CDS 45.0%
! AAAGCACCAATCCAGCAAGT+AGG - chr3_1:6816732-6816751 None:intergenic 45.0%
!! TTTATATCAATAAAATAATA+TGG + chr3_1:6817435-6817454 Msa0346400:intron 5.0%
!! ATTAAAAATATTAATAAGTA+GGG - chr3_1:6818198-6818217 None:intergenic 5.0%
!! TATTAAAAATATTAATAAGT+AGG - chr3_1:6818199-6818218 None:intergenic 5.0%
!! TAAGTTGGTAGGGTCCCTCA+AGG + chr3_1:6814692-6814711 Msa0346400:intron 50.0%
GTAGGGTCCCTCAAGGTTTA+GGG + chr3_1:6814699-6814718 Msa0346400:intron 50.0%
TAGGGTCCCTCAAGGTTTAG+GGG + chr3_1:6814700-6814719 Msa0346400:intron 50.0%
GATGACCTCTTTCACTTCGC+TGG + chr3_1:6815807-6815826 Msa0346400:CDS 50.0%
ACACACCAGCGAAGTGAAAG+AGG - chr3_1:6815815-6815834 None:intergenic 50.0%
TCGCTGGTGTGTGCAAGAAT+TGG + chr3_1:6815823-6815842 Msa0346400:CDS 50.0%
CTGGTGTGTGCAAGAATTGG+AGG + chr3_1:6815826-6815845 Msa0346400:CDS 50.0%
TCGGTCAGCTATGCTGATGA+AGG - chr3_1:6815940-6815959 None:intergenic 50.0%
TTCCTCCGATCCTTTGCCAA+AGG - chr3_1:6816156-6816175 None:intergenic 50.0%
GTCACTGACAAGGCCAACAT+AGG + chr3_1:6816317-6816336 Msa0346400:CDS 50.0%
ATCTACCTCACTCCTCAGGA+TGG + chr3_1:6816403-6816422 Msa0346400:CDS 50.0%
ACTAACCATCCTGAGGAGTG+AGG - chr3_1:6816411-6816430 None:intergenic 50.0%
ATGCATTGAGCAACCCGAGA+AGG + chr3_1:6816573-6816592 Msa0346400:intron 50.0%
ATTGAGCAACCCGAGAAGGT+GGG + chr3_1:6816577-6816596 Msa0346400:intron 50.0%
AGTAGAAAGAGCGGACACAC+GGG - chr3_1:6817224-6817243 None:intergenic 50.0%
GAGTAGAAAGAGCGGACACA+CGG - chr3_1:6817225-6817244 None:intergenic 50.0%
!! GTCATGGTGATGGGCCATAT+TGG + chr3_1:6817744-6817763 Msa0346400:intron 50.0%
CTGATTTCTGATGCAGAGGG+CGG + chr3_1:6818118-6818137 Msa0346400:intron 50.0%
GGTGCAGTTTACTACAACCG+AGG + chr3_1:6819225-6819244 Msa0346400:intron 50.0%
ACAGATGAGGTGGTTTCCCT+CGG - chr3_1:6819245-6819264 None:intergenic 50.0%
GGAAACCACCTCATCTGTTC+AGG + chr3_1:6819247-6819266 Msa0346400:intron 50.0%
CCTGAAAAGGGTGACATCAG+TGG - chr3_1:6819277-6819296 None:intergenic 50.0%
! CCACTGATGTCACCCTTTTC+AGG + chr3_1:6819274-6819293 Msa0346400:intron 50.0%
CTGGCCAAAGATGGAGAACA+TGG - chr3_1:6819451-6819470 None:intergenic 50.0%
! AACGAAGCGTCCAACTCGAA+CGG - chr3_1:6819489-6819508 None:intergenic 50.0%
! CGAAGAGATCAGGGCACTAA+TGG + chr3_1:6819560-6819579 Msa0346400:intron 50.0%
ATAGAGGTCTCTGGACGTTG+TGG - chr3_1:6819934-6819953 None:intergenic 50.0%
! GGCACCAAGATCTAGCTCAT+AGG - chr3_1:6820270-6820289 None:intergenic 50.0%
!! TGAGCTAGATCTTGGTGCCT+TGG + chr3_1:6820271-6820290 Msa0346400:intron 50.0%
ATCTCAGTTGGCAAGACAGC+AGG + chr3_1:6820304-6820323 Msa0346400:intron 50.0%
CGGACAACGCAAAAGACACT+TGG + chr3_1:6820742-6820761 Msa0346400:intron 50.0%
GCTCCTCTACTTGTGTGTGT+AGG - chr3_1:6821191-6821210 None:intergenic 50.0%
! CAATGACGGTTGGCTGAAGT+TGG + chr3_1:6821364-6821383 Msa0346400:intron 50.0%
GAGTTGAACCCACGACAATG+TGG - chr3_1:6821395-6821414 None:intergenic 50.0%
AACTTTGCCCTCATGTGTGC+CGG + chr3_1:6821475-6821494 Msa0346400:intron 50.0%
TCATCGTCGTCACGATCCAA+TGG - chr3_1:6822110-6822129 None:intergenic 50.0%
! ATAAGTGTTGCTGCGGCAAG+AGG + chr3_1:6822275-6822294 Msa0346400:CDS 50.0%
! TAAGTGTTGCTGCGGCAAGA+GGG + chr3_1:6822276-6822295 Msa0346400:CDS 50.0%
AGAGGGAATGATCTGGTCCA+AGG + chr3_1:6822293-6822312 Msa0346400:CDS 50.0%
GAGGGAATGATCTGGTCCAA+GGG + chr3_1:6822294-6822313 Msa0346400:CDS 50.0%
! TGATCTGGTCCAAGGGCATA+CGG + chr3_1:6822301-6822320 Msa0346400:CDS 50.0%
! TAACCGGTGTCAAGCTGAAC+TGG - chr3_1:6822380-6822399 None:intergenic 50.0%
GGTAGGGTCCTTCAAGGTTT+AGG + chr3_1:6822534-6822553 Msa0346400:intron 50.0%
TCGCTGGTGTGTGCAAGAAT+TGG + chr3_1:6815823-6815842 Msa0346400:CDS 50.0%
CTGGTGTGTGCAAGAATTGG+AGG + chr3_1:6815826-6815845 Msa0346400:CDS 50.0%
TCGGTCAGCTATGCTGATGA+AGG - chr3_1:6815940-6815959 None:intergenic 50.0%
! TGCTTTTGGCAAAGGCTCAG+AGG + chr3_1:6823977-6823996 Msa0346400:CDS 50.0%
ATCTACCTCACTCCTCAGGA+TGG + chr3_1:6816403-6816422 Msa0346400:CDS 50.0%
ACTAACCATCCTGAGGAGTG+AGG - chr3_1:6816411-6816430 None:intergenic 50.0%
ATGCATTGAGCAACCCGAGA+AGG + chr3_1:6816573-6816592 Msa0346400:intron 50.0%
ATTGAGCAACCCGAGAAGGT+GGG + chr3_1:6816577-6816596 Msa0346400:intron 50.0%
GGTAGGGTCCCTCAAGGTTT+AGG + chr3_1:6814698-6814717 Msa0346400:intron 55.0%
TGCCTTTGGCAAAGGATCGG+AGG + chr3_1:6816151-6816170 Msa0346400:CDS 55.0%
CATTGAGCAACCCGAGAAGG+TGG + chr3_1:6816576-6816595 Msa0346400:intron 55.0%
TTGAGCAACCCGAGAAGGTG+GGG + chr3_1:6816578-6816597 Msa0346400:intron 55.0%
AATGTCCCTCACCCCACAGA+AGG - chr3_1:6819028-6819047 None:intergenic 55.0%
GGGATCCTGAACAGATGAGG+TGG - chr3_1:6819255-6819274 None:intergenic 55.0%
GTGGGGATCCTGAACAGATG+AGG - chr3_1:6819258-6819277 None:intergenic 55.0%
! ACGGCCCTCTAGTACTGAAC+TGG - chr3_1:6819470-6819489 None:intergenic 55.0%
TACTAGAGGGCCGTTCGAGT+TGG + chr3_1:6819476-6819495 Msa0346400:intron 55.0%
!! GTTCGAGTTGGACGCTTCGT+TGG + chr3_1:6819488-6819507 Msa0346400:intron 55.0%
TTGAGCTCCGGCACACATGA+GGG - chr3_1:6821485-6821504 None:intergenic 55.0%
!! GGCCTCTAGATTTGTTGGGC+CGG + chr3_1:6821661-6821680 Msa0346400:intron 55.0%
AGCCGGCCCAACAAATCTAG+AGG - chr3_1:6821666-6821685 None:intergenic 55.0%
!! CTAGATTTGTTGGGCCGGCT+CGG + chr3_1:6821666-6821685 Msa0346400:intron 55.0%
CGGCGACAGAGCTGAAATGA+GGG - chr3_1:6821727-6821746 None:intergenic 55.0%
TGCGGCAAGAGGGAATGATC+TGG + chr3_1:6822286-6822305 Msa0346400:CDS 55.0%
CCTCCAGTTCAGCTTGACAC+CGG + chr3_1:6822374-6822393 Msa0346400:CDS 55.0%
GTCACCGACAAGGCCAACAT+AGG + chr3_1:6824143-6824162 Msa0346400:CDS 55.0%
CATTGAGCAACCCGAGAAGG+TGG + chr3_1:6816576-6816595 Msa0346400:intron 55.0%
TTGAGCAACCCGAGAAGGTG+GGG + chr3_1:6816578-6816597 Msa0346400:intron 55.0%
AGGAAGCTGCGCACCTTCTG+TGG + chr3_1:6819012-6819031 Msa0346400:intron 60.0%
GGAAGCTGCGCACCTTCTGT+GGG + chr3_1:6819013-6819032 Msa0346400:intron 60.0%
GAAGCTGCGCACCTTCTGTG+GGG + chr3_1:6819014-6819033 Msa0346400:intron 60.0%
CCAGATGAACCGCACACTCC+AGG - chr3_1:6819397-6819416 None:intergenic 60.0%
CCTGGAGTGTGCGGTTCATC+TGG + chr3_1:6819394-6819413 Msa0346400:intron 60.0%
GTTGAGCTCCGGCACACATG+AGG - chr3_1:6821486-6821505 None:intergenic 60.0%
AGTCGGGTTCATCACCGAGC+CGG - chr3_1:6821683-6821702 None:intergenic 60.0%
GCGGCGACAGAGCTGAAATG+AGG - chr3_1:6821728-6821747 None:intergenic 60.0%
! CCGGTGTCAAGCTGAACTGG+AGG - chr3_1:6822377-6822396 None:intergenic 60.0%
CTGATGCAGAGGGCGGAGAG+AGG + chr3_1:6818125-6818144 Msa0346400:intron 65.0%
TGCAGAGGGCGGAGAGAGGT+TGG + chr3_1:6818129-6818148 Msa0346400:intron 65.0%
TGCGCACCTTCTGTGGGGTG+AGG + chr3_1:6819019-6819038 Msa0346400:intron 65.0%
GCGCACCTTCTGTGGGGTGA+GGG + chr3_1:6819020-6819039 Msa0346400:intron 65.0%
! GTCCTTCGACCGACTCAGCC+TGG + chr3_1:6819376-6819395 Msa0346400:intron 65.0%
CTCCAGGCTGAGTCGGTCGA+AGG - chr3_1:6819381-6819400 None:intergenic 65.0%
CCGCACACTCCAGGCTGAGT+CGG - chr3_1:6819388-6819407 None:intergenic 65.0%
CCGACTCAGCCTGGAGTGTG+CGG + chr3_1:6819385-6819404 Msa0346400:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 6813926 6824616 6813926 ID=Msa0346400;Name=Msa0346400
chr3_1 mRNA 6813926 6824616 6813926 ID=Msa0346400-mRNA-1;Parent=Msa0346400;Name=Msa0346400-mRNA-1;_AED=0.15;_eAED=0.17;_QI=13|0|0|1|0.18|0.08|12|0|998
chr3_1 exon 6813926 6813970 6813926 ID=Msa0346400-mRNA-1:exon:1922;Parent=Msa0346400-mRNA-1
chr3_1 exon 6813995 6814215 6813995 ID=Msa0346400-mRNA-1:exon:1923;Parent=Msa0346400-mRNA-1
chr3_1 exon 6814225 6814464 6814225 ID=Msa0346400-mRNA-1:exon:1924;Parent=Msa0346400-mRNA-1
chr3_1 exon 6815727 6815962 6815727 ID=Msa0346400-mRNA-1:exon:1925;Parent=Msa0346400-mRNA-1
chr3_1 exon 6815978 6816217 6815978 ID=Msa0346400-mRNA-1:exon:1926;Parent=Msa0346400-mRNA-1
chr3_1 exon 6816227 6816428 6816227 ID=Msa0346400-mRNA-1:exon:1927;Parent=Msa0346400-mRNA-1
chr3_1 exon 6816470 6816533 6816470 ID=Msa0346400-mRNA-1:exon:1928;Parent=Msa0346400-mRNA-1
chr3_1 exon 6816595 6816789 6816595 ID=Msa0346400-mRNA-1:exon:1929;Parent=Msa0346400-mRNA-1
chr3_1 exon 6821860 6821904 6821860 ID=Msa0346400-mRNA-1:exon:1930;Parent=Msa0346400-mRNA-1
chr3_1 exon 6821929 6822143 6821929 ID=Msa0346400-mRNA-1:exon:1931;Parent=Msa0346400-mRNA-1
chr3_1 exon 6822156 6822395 6822156 ID=Msa0346400-mRNA-1:exon:1932;Parent=Msa0346400-mRNA-1
chr3_1 exon 6823553 6824616 6823553 ID=Msa0346400-mRNA-1:exon:1933;Parent=Msa0346400-mRNA-1
chr3_1 five_prime_UTR 6813926 6813938 6813926 ID=Msa0346400-mRNA-1:five_prime_utr;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6813939 6813970 6813939 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6813995 6814215 6813995 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6814225 6814464 6814225 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6815727 6815962 6815727 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6815978 6816217 6815978 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6816227 6816428 6816227 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6816470 6816533 6816470 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6816595 6816789 6816595 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6821860 6821904 6821860 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6821929 6822143 6821929 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6822156 6822395 6822156 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
chr3_1 CDS 6823553 6824616 6823553 ID=Msa0346400-mRNA-1:cds;Parent=Msa0346400-mRNA-1
Gene Sequence

>Msa0346400

ATGAAGAAGCTCTCAGTTGGTGATGCATTATCGTTTGGATATGAGAAAAGGGAAAAATATGGATCTTTTCTACAAATTATGAAGGATTTCAAGGCTGAAAGAATTGATGCTAGAGATGTCAAATTAAGAGTGTACGAGTTGTTGGACGGCCATGAAGATTTAATTTCGAGATTCAACATCTTCTTGCCAACTGAATATGAAATCAAACTTCCATTAGATCGAGACGATGATGATGATGAACAACAAGAAGGTCAGACAAAAGATGCATTTGCTTTTCTCGAGAAAGTAAAAGATGTGTTTCATGATAAGAATAGGGAAAAGTATGATGAGTTTTTAGAAATTGTTAAGGATTTTATGGTTCGAAGAATTGATATAAGTGTTGTCGCTGCAAGAGTGAATGAGCTGTTTCAAGGGCATACAGATTTAATTTTGGGAGTCAATGCCTTCTTGCCAAAGAAATATCGAATCACAACTTCAGTTCAGCTGGACATTGGGGAAGCAATGAATAACATACAAGATGGTTGTAAAATTTCTTGGGATATGCTTGATCTCATTTCCAGAGGTCTAGATTTCGATGACCTCTTTCACTTCGCTGGTGTGTGCAAGAATTGGAGGGAATTTCATAAAAATTATTGGAAAAAGTTCTTGGCATTCCAAGAACCATTGCTTATTCAAAAGTCTTCCCATGATAAGAAATCCTTTTCCTTCATCAGCATAGCTGACCGAAAAACGATCAATCAATTCTGGCACGTTGCTTATTCTGGCTGTTCTAGCGGATATTTGATCATGACAGGGGACAATAATTCTTTTCTGCTATTGAATCCATTTACAAGAAGAAAGAAGGTAATCAATACATCAACCTTTAAAGTCAATTCTTCTTATTTTGCTTACCATGTCTTACTTGCCTTTGGCAAAGGATCGGAGGAATTTGTCTTAGTCGCTTCATGTAAAAGTTCTGGCAGTTTGTATTCTCGGAATTTGGGTTGGGTTACATATTCAACAATGGAAAGTCCATGGAAGATTGTTGACTTTGTTGTATTGCATCATACTATATACGTTGTCACTGACAAGGCCAACATAGGTGTACTTGACTTGAATTCCACAAATATAAAATTTTTAGAACTGAAGAATACACCCGATGTAACATCTACCTCACTCCTCAGGATGGTTAGAAATATTGAATGTATACAAGATAGACTTCTCAACCATGAATTATATCAAGCTGGAAATTTTGGGTGGGGTTTTGAAAGCAACTCTTTGTATGCCATCAATATTTCATCCACAACATGTAATGTGTGTTTAAGGGATGATAACAAACTGCCAAAATACATTAAGCATGATAGAACTCGAGTTCCTCCAAAGGAAAACGCCTACTTGCTGGATTGGTGCTTTAGACATCTACACTATGAGGTGGATCTTTCTCCAGTTGAAACTCCCTTCAAGATGAAGAAGCTCTTAGTTGGTGATGCATTATCGTTTGGATTTGAGAAAAGGGAAAAATATGGATCTTTTCTACAAATTATGAAGGATTTCAAGGCTGAAAGAATTGATGCTAGGGATGTCAAATTAAGAGTGTACGAGTTGTTGGACGGCCATGAAGATTTAATTTCGAAATTCAACATCTTCTTGCCAACTGAATATGAAATCAAACTTCCATTGGATCGTGACGACGATGATGACGAACTACAAGAGACAAAAGATGCATTTGCATTTCTCGAGAAAGTAAAAGATGTGTTTCATGGTAAGAATGAGGAAAAGTATAAGGAGTTTTTAAAAATTGTTAAGGATTTCAAGGCCGGAAGAATTGATATAAGTGTTGCTGCGGCAAGAGGGAATGATCTGGTCCAAGGGCATACGGATTTAATTTTGGGATTCAACGCCTTCTTGCCAAAGAAATATCGAATCACACCTCCAGTTCAGCTTGACACCGGGGAAGCAATGAATAACATACAAGATGGTTGTAAAATTTCTTGGGATATGCTTGATCTCATTTCCAGAGATCTAGATTTCGATGACCTCTTTCAATTCGCTGGTGTGTGCAAGAATTGGAGGGAATTTCATAAAACTTATTGGAAAAAGTTCTTGGCATTCCAAGAACCATTACTTATTCAAAAGTCTTCCCATGATAAGAAATCCTTTTCCTTCATCAGCATAGCTGACCGAAAAGTTTATCACTCCAAGGCGATCAATCAATTCTGGCACGTTGCTTATTCTGGCTGTTCTAGCGGATATTTGATCATGACAGGGGACAATAATTCTTTTCTTCTATTGAATCCATTTACAAGAAGAAAGAAGGTAATCAATACATCAACCTTTAAAGTCAATTCTTCTTATTTTGCTTACCATGTCTTGCTTGCTTTTGGCAAAGGCTCAGAGGAATTTGTCTTAGTCGCTTCATGTAAAAGTTCTGGCAGTTTGTATGTCTATCAGTCTGGAAATTTGGGCTGGGTTACATATTCAACAATGGAAAGTCCATGGAAGGTTGTTGACTTTGTTGTTTTGCATCATACTATATACGTTGTCACCGACAAGGCCAACATAGGTGTACTTGACTTGAATTCCACAAATATAAAATTTTTAGAACTGAAGAATACACCCGATGTAACATCTACCTCACTCCTCAGGATGGTTAGTTGTGATGGACAACTTTTAGTGATTCATATTGCTTCAGAGGAAATATTGAATGTTTACAAGATAGACTTCTCAGCCATGAATTTTGTCAAGATGGAAACTTTGGGTGACATTGCATTATTTTATGCTTCGGGGGAATACTTCTATGCATTGAGCAACCCGAGAAGGTGGGGTTTTGAAAGCAACTCTTTGTATGCCATCAATATTTCATCCACAACATGTAAAGTGTGTTTAGGGGATGATAACGAACTGCCAAAATACATTAAGCATGATAGAACTCGAGTTCCTCCAAAGGAAAACGCCTACTTGCTGGATTGGTGCTTTAGACATCTACACTATGAGGTGGATCTTTCTCCAGTTGAG
Protein sequence

>Msa0346400

MKKLSVGDALSFGYEKREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHEDLISRFNIFLPTEYEIKLPLDRDDDDDEQQEGQTKDAFAFLEKVKDVFHDKNREKYDEFLEIVKDFMVRRIDISVVAARVNELFQGHTDLILGVNAFLPKKYRITTSVQLDIGEAMNNIQDGCKISWDMLDLISRGLDFDDLFHFAGVCKNWREFHKNYWKKFLAFQEPLLIQKSSHDKKSFSFISIADRKTINQFWHVAYSGCSSGYLIMTGDNNSFLLLNPFTRRKKVINTSTFKVNSSYFAYHVLLAFGKGSEEFVLVASCKSSGSLYSRNLGWVTYSTMESPWKIVDFVVLHHTIYVVTDKANIGVLDLNSTNIKFLELKNTPDVTSTSLLRMVRNIECIQDRLLNHELYQAGNFGWGFESNSLYAINISSTTCNVCLRDDNKLPKYIKHDRTRVPPKENAYLLDWCFRHLHYEVDLSPVETPFKMKKLLVGDALSFGFEKREKYGSFLQIMKDFKAERIDARDVKLRVYELLDGHEDLISKFNIFLPTEYEIKLPLDRDDDDDELQETKDAFAFLEKVKDVFHGKNEEKYKEFLKIVKDFKAGRIDISVAAARGNDLVQGHTDLILGFNAFLPKKYRITPPVQLDTGEAMNNIQDGCKISWDMLDLISRDLDFDDLFQFAGVCKNWREFHKTYWKKFLAFQEPLLIQKSSHDKKSFSFISIADRKVYHSKAINQFWHVAYSGCSSGYLIMTGDNNSFLLLNPFTRRKKVINTSTFKVNSSYFAYHVLLAFGKGSEEFVLVASCKSSGSLYVYQSGNLGWVTYSTMESPWKVVDFVVLHHTIYVVTDKANIGVLDLNSTNIKFLELKNTPDVTSTSLLRMVSCDGQLLVIHIASEEILNVYKIDFSAMNFVKMETLGDIALFYASGEYFYALSNPRRWGFESNSLYAINISSTTCKVCLGDDNELPKYIKHDRTRVPPKENAYLLDWCFRHLHYEVDLSPVE