AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0346960

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0346960 MtrunA17_Chr3g0077361 73.432 542 105 4 6 543 1 507 0.0 774
Msa0346960 MtrunA17_Chr3g0077411 71.670 533 129 4 23 543 1 523 0.0 750
Msa0346960 MtrunA17_Chr3g0077461 67.292 480 121 7 58 535 22 467 0.0 623
Msa0346960 MtrunA17_Chr3g0077461 49.167 240 103 5 38 264 232 465 1.45e-62 212
Msa0346960 MtrunA17_Chr4g0009491 69.124 434 113 2 57 489 11 424 0.0 588
Msa0346960 MtrunA17_Chr4g0009491 55.399 213 73 2 304 516 11 201 1.06e-67 225
Msa0346960 MtrunA17_Chr4g0009491 52.857 210 76 2 38 224 220 429 3.65e-61 207
Msa0346960 MtrunA17_Chr3g0077381 68.172 443 110 4 57 497 34 447 0.0 578
Msa0346960 MtrunA17_Chr3g0077381 51.073 233 68 4 304 534 34 222 3.50e-61 208
Msa0346960 MtrunA17_Chr3g0077381 50.718 209 75 2 38 224 242 444 1.87e-57 198
Msa0346960 MtrunA17_Chr5g0429931 70.711 239 70 0 305 543 10 248 4.95e-118 348
Msa0346960 MtrunA17_Chr5g0429931 56.356 236 79 3 53 265 5 239 8.01e-77 243
Msa0346960 MtrunA17_Chr3g0077451 69.295 241 63 2 304 543 10 240 6.48e-116 343
Msa0346960 MtrunA17_Chr3g0077451 58.296 223 78 4 57 265 10 231 6.90e-73 232
Msa0346960 MtrunA17_Chr3g0077431 67.299 211 58 2 334 543 1 201 3.43e-96 291
Msa0346960 MtrunA17_Chr3g0077431 55.440 193 71 4 87 265 1 192 1.06e-54 183
Msa0346960 MtrunA17_Chr3g0077421 65.714 210 60 2 334 541 1 200 2.47e-91 278
Msa0346960 MtrunA17_Chr3g0077421 52.062 194 77 4 87 265 1 193 1.82e-48 166
Msa0346960 MtrunA17_Chr3g0077441 65.714 210 60 2 334 541 1 200 2.47e-91 278
Msa0346960 MtrunA17_Chr3g0077441 52.062 194 77 4 87 265 1 193 1.82e-48 166
Msa0346960 MtrunA17_Chr7g0233561 27.832 309 170 10 283 540 9 315 6.02e-26 108
Msa0346960 MtrunA17_Chr7g0233561 35.294 136 80 2 42 169 17 152 1.62e-19 89.7
Msa0346960 MtrunA17_Chr8g0390841 25.667 300 164 6 290 537 39 331 9.90e-26 110
Msa0346960 MtrunA17_Chr8g0390841 29.365 126 84 1 57 177 53 178 1.09e-14 76.6
Msa0346960 MtrunA17_Chr3g0131891 27.682 289 172 7 289 540 18 306 1.26e-25 107
Msa0346960 MtrunA17_Chr3g0131891 27.305 282 139 9 36 254 12 290 2.92e-19 89.4
Msa0346960 MtrunA17_Chr1g0162441 43.636 110 62 0 290 399 7 116 1.84e-25 108
Msa0346960 MtrunA17_Chr1g0162441 43.119 109 61 1 43 150 7 115 3.07e-22 99.4
Msa0346960 MtrunA17_Chr1g0162441 35.385 130 73 4 416 538 268 393 1.82e-14 75.5
Msa0346960 MtrunA17_Chr7g0233521 28.205 273 150 6 306 540 2 266 4.03e-24 102
Msa0346960 MtrunA17_Chr7g0233521 38.372 86 53 0 59 144 2 87 1.26e-16 80.5
Msa0346960 MtrunA17_Chr1g0208771 26.042 288 151 8 305 538 12 291 4.68e-24 105
Msa0346960 MtrunA17_Chr1g0208771 34.524 84 55 0 58 141 12 95 2.13e-12 69.3
Msa0346960 MtrunA17_Chr3g0103171 28.137 263 156 4 305 536 5 265 7.70e-24 101
Msa0346960 MtrunA17_Chr3g0103171 26.953 256 133 7 58 260 5 259 7.57e-18 83.6
Msa0346960 MtrunA17_Chr3g0103181 29.137 278 158 8 289 536 11 279 2.20e-21 94.4
Msa0346960 MtrunA17_Chr3g0103181 42.574 101 56 1 42 142 11 109 9.01e-19 86.7
Msa0346960 MtrunA17_Chr4g0033961 41.176 102 60 0 287 388 3 104 4.57e-21 95.9
Msa0346960 MtrunA17_Chr4g0033961 39.091 110 67 0 40 149 3 112 1.38e-19 91.3
Msa0346960 MtrunA17_Chr4g0033961 30.526 190 102 6 373 540 210 391 8.06e-15 76.6
Msa0346960 MtrunA17_Chr1g0163071 26.531 294 146 8 306 537 2 287 6.04e-21 93.6
Msa0346960 MtrunA17_Chr1g0163071 23.607 305 136 8 59 273 2 299 9.08e-15 75.5
Msa0346960 MtrunA17_Chr1g0162411 40.909 110 63 1 290 399 7 114 6.27e-20 92.8
Msa0346960 MtrunA17_Chr1g0162411 40.741 108 63 1 43 150 7 113 1.38e-17 85.5
Msa0346960 MtrunA17_Chr5g0419201 36.364 121 76 1 43 162 16 136 8.64e-20 87.4
Msa0346960 MtrunA17_Chr5g0419201 33.962 106 70 0 283 388 9 114 2.90e-18 83.2
Msa0346960 MtrunA17_Chr7g0233531 26.642 274 153 7 306 540 2 266 2.49e-19 88.6
Msa0346960 MtrunA17_Chr7g0233531 36.145 83 53 0 59 141 2 84 2.37e-14 73.6
Msa0346960 MtrunA17_Chr5g0421851 36.025 161 88 4 389 541 34 187 7.94e-19 84.7
Msa0346960 MtrunA17_Chr5g0421921 41.284 109 63 1 433 541 5 112 8.82e-19 82.0
Msa0346960 MtrunA17_Chr5g0421731 41.284 109 63 1 433 541 5 112 8.82e-19 82.0
Msa0346960 MtrunA17_Chr7g0233541 27.397 292 145 9 306 540 2 283 1.32e-18 86.7
Msa0346960 MtrunA17_Chr7g0233541 36.607 112 64 3 59 164 2 112 4.28e-16 79.3
Msa0346960 MtrunA17_Chr7g0233571 40.594 101 60 0 289 389 9 109 2.96e-18 84.0
Msa0346960 MtrunA17_Chr7g0233571 37.000 100 63 0 42 141 9 108 1.30e-17 82.0
Msa0346960 MtrunA17_Chr3g0103151 34.694 147 92 2 42 188 11 153 3.22e-18 82.0
Msa0346960 MtrunA17_Chr3g0103151 37.705 122 72 2 289 410 11 128 1.02e-16 77.8
Msa0346960 MtrunA17_Chr3g0103191 30.204 245 135 7 290 503 12 251 4.20e-18 84.3
Msa0346960 MtrunA17_Chr3g0103191 40.000 100 58 1 43 142 12 109 4.74e-16 78.2
Msa0346960 MtrunA17_Chr1g0154161 24.648 284 172 8 289 536 29 306 4.76e-17 82.4
Msa0346960 MtrunA17_Chr1g0163251 25.993 277 161 8 299 539 14 282 4.79e-17 83.2
Msa0346960 MtrunA17_Chr1g0171611 26.667 270 171 9 288 538 7 268 2.64e-16 79.7
Msa0346960 MtrunA17_Chr1g0162421 48.276 58 30 0 304 361 7 64 1.16e-15 71.6
Msa0346960 MtrunA17_Chr1g0162421 46.552 58 31 0 57 114 7 64 6.41e-14 66.6
Msa0346960 MtrunA17_Chr1g0163221 25.000 288 169 10 289 536 10 290 1.65e-15 78.2
Msa0346960 MtrunA17_Chr6g0467351 34.884 129 75 3 289 411 14 139 8.32e-15 73.9
Msa0346960 MtrunA17_Chr3g0103201 27.854 219 124 6 349 536 5 220 2.76e-14 72.4
Msa0346960 MtrunA17_Chr4g0067431 24.214 318 174 10 278 536 2 311 6.08e-14 73.2
Msa0346960 MtrunA17_Chr1g0163101 31.008 129 76 3 284 412 11 126 1.49e-13 69.3
Msa0346960 MtrunA17_Chr1g0163231 24.731 279 173 10 290 538 9 280 1.09e-12 68.9
Msa0346960 MtrunA17_Chr1g0163261 26.148 283 172 9 288 538 7 284 1.18e-12 68.9
Msa0346960 MtrunA17_Chr1g0163181 22.857 280 171 5 299 535 14 291 1.94e-12 69.3
Msa0346960 MtrunA17_Chr1g0163131 32.174 115 75 2 289 403 17 128 2.26e-12 68.2
Msa0346960 MtrunA17_Chr6g0476181 42.169 83 45 2 306 388 2 81 4.53e-12 64.3
Msa0346960 MtrunA17_Chr1g0163191 32.710 107 70 1 299 405 14 118 2.02e-11 62.4
Msa0346960 MtrunA17_Chr1g0163191 31.858 113 65 2 55 167 17 117 2.19e-11 62.4
Msa0346960 MtrunA17_Chr1g0163061 33.654 104 68 1 289 391 14 117 2.94e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0346960 AT3G18990.1 45.455 99 54 0 290 388 6 104 1.98e-22 99.0
Msa0346960 AT3G18990.1 41.414 99 58 0 43 141 6 104 5.76e-20 91.7
Msa0346960 AT3G18990.1 34.266 143 82 5 406 542 205 341 6.43e-13 70.5
Msa0346960 AT3G18990.2 45.455 99 54 0 290 388 6 104 3.92e-22 98.6
Msa0346960 AT3G18990.2 41.414 99 58 0 43 141 6 104 9.77e-20 91.7
Msa0346960 AT3G18990.2 34.722 144 82 5 406 543 205 342 3.10e-13 72.0
Msa0346960 AT4G01580.1 37.879 132 79 1 259 390 2 130 8.84e-21 90.9
Msa0346960 AT4G01580.1 33.588 131 82 2 13 141 1 128 9.76e-18 82.0
Msa0346960 AT3G18960.2 38.636 132 78 1 259 390 2 130 1.25e-20 90.5
Msa0346960 AT3G18960.2 35.043 117 73 1 25 141 15 128 6.86e-18 82.4
Msa0346960 AT3G18960.1 38.636 132 78 1 259 390 2 130 1.58e-20 90.5
Msa0346960 AT3G18960.1 35.043 117 73 1 25 141 15 128 1.70e-17 81.6
Msa0346960 AT1G49475.1 36.923 130 79 2 22 151 15 141 9.22e-18 82.0
Msa0346960 AT1G49475.1 40.187 107 63 1 288 394 32 137 9.86e-18 82.0
Msa0346960 AT3G18960.3 40.909 88 52 0 303 390 6 93 7.49e-15 73.2
Msa0346960 AT3G18960.3 36.047 86 55 0 56 141 6 91 2.99e-13 68.6
Msa0346960 AT1G49480.3 35.338 133 76 4 416 542 98 226 2.08e-14 73.2
Msa0346960 AT1G49480.1 35.338 133 76 4 416 542 98 226 2.08e-14 73.2
Msa0346960 AT1G49480.2 35.338 133 76 4 416 542 98 226 2.08e-14 73.2
Msa0346960 AT1G26680.6 22.545 550 339 24 42 535 14 532 3.19e-11 66.6
Msa0346960 AT1G26680.5 22.545 550 339 24 42 535 14 532 3.20e-11 66.6
Msa0346960 AT2G24645.1 21.272 503 343 20 40 524 3 470 9.57e-11 64.7

Find 102 sgRNAs with CRISPR-Local

Find 195 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGAGTTTATAACAAAATT+TGG 0.100922 3_1:+7858494 Msa0346960:CDS
ACTGCTTTCCTTGATAATTT+TGG 0.125823 3_1:-7859026 None:intergenic
GAATACTATTCTATTTATTA+TGG 0.217855 3_1:+7858632 Msa0346960:CDS
TTGTTGTCCGTTATAAAATT+AGG 0.232666 3_1:-7860553 None:intergenic
GGCAGCATCCTTTGATCTTT+TGG 0.235120 3_1:-7858795 None:intergenic
GATGAGTTTATAACAAGATT+TGG 0.242784 3_1:+7859872 Msa0346960:CDS
TTCAAAACTTCAAGTGTTAC+TGG 0.260689 3_1:+7860118 Msa0346960:CDS
GGAAAGCAGTGGGAAGTTTC+TGG 0.267335 3_1:+7859039 Msa0346960:CDS
AAATACTATTCGTTAGGATA+TGG 0.294914 3_1:+7860010 Msa0346960:CDS
TATGGCTTTCATAAAATGTT+TGG 0.299040 3_1:-7857298 None:intergenic
ACTAGTGGATTCTATAGATT+TGG 0.305520 3_1:+7859099 Msa0346960:CDS
CGATGGTCGTGAGTGGGATA+TGG 0.308591 3_1:+7858553 Msa0346960:CDS
TACTATCTCTTTGTCATGAA+TGG 0.314672 3_1:-7859423 None:intergenic
AAGTGAGTGTCATGGGAAAA+AGG 0.323227 3_1:+7860192 Msa0346960:CDS
TATGGCCTTCTTGAAATGTT+TGG 0.331141 3_1:-7859390 None:intergenic
CAATGACAGAAAAGGAAGTT+AGG 0.334106 3_1:+7859363 Msa0346960:CDS
TGGAGCTTTGTAGGAACATT+TGG 0.337830 3_1:-7860448 None:intergenic
ATGAGTTTATAACAAAATTT+GGG 0.347730 3_1:+7858495 Msa0346960:CDS
TTCAAAACTCCGAGGACTAA+TGG 0.352679 3_1:+7858740 Msa0346960:CDS
TCCCTTTGTATTTGAAAGAT+AGG 0.356495 3_1:-7860039 None:intergenic
TCCATTGTGTAGTATGTTCC+TGG 0.362474 3_1:+7858958 Msa0346960:intron
GGACTAGCACACTTTGTGTT+TGG 0.364884 3_1:-7860145 None:intergenic
ATGAGTTTATAACAAGATTT+GGG 0.367534 3_1:+7859873 Msa0346960:CDS
TGCATAGCAGCCAAAGGCTT+TGG 0.374814 3_1:-7858852 None:intergenic
ATGAATGGGCGAGGGAAGTA+TGG 0.376143 3_1:-7859408 None:intergenic
AGCATGTTTAGACACGCTTT+TGG 0.391587 3_1:-7860215 None:intergenic
GTGCTCGGACACTTTATGTT+TGG 0.397057 3_1:-7858767 None:intergenic
GTGGGAAGTTTCTGGTGTAT+TGG 0.397299 3_1:+7859047 Msa0346960:CDS
ATGATCTGGAGGAGGAAGTA+TGG 0.403287 3_1:-7857316 None:intergenic
AATCTTGTTATAAACTCATC+TGG 0.413404 3_1:-7859869 None:intergenic
TTTGCAAAATACTATTCGTT+AGG 0.426106 3_1:+7860004 Msa0346960:CDS
AAATGTTTGGAATCTTTCTC+CGG 0.434011 3_1:-7857285 None:intergenic
CAGTTCCTGATGGTCGTGAT+TGG 0.434376 3_1:+7859924 Msa0346960:CDS
TATTGCAATGCAGCCTCCAC+AGG 0.439091 3_1:+7859325 Msa0346960:intron
TATTTAGATTTCAAGTATGA+AGG 0.439885 3_1:+7858659 Msa0346960:CDS
TGGAGCATGAACGGAACATA+TGG 0.440567 3_1:-7859006 None:intergenic
ACTATCTCTTTGTCATGAAT+GGG 0.448674 3_1:-7859422 None:intergenic
ATTGTGACTTCTAGCACAAC+CGG 0.451587 3_1:-7860622 None:intergenic
TCTTTCTCCGGCTCCGGCGA+CGG 0.452971 3_1:-7857273 None:intergenic
ACACTCACTTGTTTCAACCT+TGG 0.458460 3_1:-7860179 None:intergenic
ACCTATCTTTCAAATACAAA+GGG 0.468933 3_1:+7860038 Msa0346960:CDS
AATGACAGAAAAGGAAGTTA+GGG 0.489586 3_1:+7859364 Msa0346960:CDS
TTGGAATCTTTCTCCGGCTC+CGG 0.490863 3_1:-7857279 None:intergenic
CTCTTTGTCATGAATGGGCG+AGG 0.492559 3_1:-7859417 None:intergenic
GTAACTTGTAACACCACAAC+AGG 0.496207 3_1:-7859180 None:intergenic
ACACAAAGTGTGCTAGTCCT+AGG 0.498715 3_1:+7860149 Msa0346960:CDS
ATATGTTCCGTCGCCGGAGC+CGG 0.500331 3_1:+7857266 Msa0346960:CDS
TACCTATCTTTCAAATACAA+AGG 0.508968 3_1:+7860037 Msa0346960:CDS
TTGAAACAAGTGAGTGTCAT+GGG 0.514216 3_1:+7860185 Msa0346960:CDS
TTTGGTTCTCCATTAGTCCT+CGG 0.518425 3_1:-7858749 None:intergenic
TTCATGCTCCAAAATTATCA+AGG 0.518713 3_1:+7859018 Msa0346960:CDS
ACAAAGCTCCAAAATTCTGA+TGG 0.522166 3_1:+7860460 Msa0346960:CDS
ATATCCCACTCACGACCATC+GGG 0.524249 3_1:-7858551 None:intergenic
TGCCCAGTCAATGACAGAAA+AGG 0.526979 3_1:+7859355 Msa0346960:CDS
ATTTAGATTTCAAGTATGAA+GGG 0.527803 3_1:+7858660 Msa0346960:CDS
CATATCCCACTCACGACCAT+CGG 0.533925 3_1:-7858552 None:intergenic
GTGGATTCTATAGATTTGGA+AGG 0.537364 3_1:+7859103 Msa0346960:CDS
AGATCAAAGGATGCTGCCAA+TGG 0.538359 3_1:+7858800 Msa0346960:CDS
GAGAAGATATGTTCCGTCGC+CGG 0.544889 3_1:+7857260 Msa0346960:CDS
CCTCACCGCATATTTCGTCT+TGG 0.545297 3_1:-7860305 None:intergenic
ACAAGTTACTGCTTCTTGCA+CGG 0.545719 3_1:+7859194 Msa0346960:CDS
ATCGTCTATGCGAATAGTGA+AGG 0.551631 3_1:+7860525 Msa0346960:CDS
GGAATCCAAACATTTCAAGA+AGG 0.552761 3_1:+7859385 Msa0346960:CDS
AGTGTGCTAGTCCTAGGAAA+AGG 0.553447 3_1:+7860155 Msa0346960:CDS
CTGTTCCCGATGGTCGTGAG+TGG 0.561524 3_1:+7858546 Msa0346960:CDS
GCGACGGAACATATCTTCTC+CGG 0.567057 3_1:-7857257 None:intergenic
CAATGCAGCCTCCACAGGGA+AGG 0.568652 3_1:+7859330 Msa0346960:intron
CACTGCTTCCAAAAGATCAA+AGG 0.568858 3_1:+7858787 Msa0346960:CDS
AAAATTATCAAGGAAAGCAG+TGG 0.569536 3_1:+7859028 Msa0346960:CDS
TGGGCACGCCTTCCCTGTGG+AGG 0.576792 3_1:-7859338 None:intergenic
TGTTCCTGGTGAATTTGCTA+AGG 0.578362 3_1:+7858972 Msa0346960:CDS
ACAACTTTGAGCTGATCAAG+AGG 0.583696 3_1:+7859154 Msa0346960:CDS
TCAGCAATGCGAATTACTAG+TGG 0.592049 3_1:+7859084 Msa0346960:CDS
AAGGGAAAACAATCTATCAA+AGG 0.593937 3_1:+7859122 Msa0346960:CDS
ACGACCATCGGGAACAGTAA+TGG 0.600617 3_1:-7858540 None:intergenic
TGTTCCCGATGGTCGTGAGT+GGG 0.605549 3_1:+7858547 Msa0346960:CDS
GACTGGGCACGCCTTCCCTG+TGG 0.606676 3_1:-7859341 None:intergenic
AAATTATCAAGGAAAGCAGT+GGG 0.608378 3_1:+7859029 Msa0346960:CDS
GCTACCATTACTGTTCCCGA+TGG 0.608443 3_1:+7858536 Msa0346960:CDS
GCTACAGTTACAGTTCCTGA+TGG 0.609577 3_1:+7859914 Msa0346960:CDS
GTTGAAACAAGTGAGTGTCA+TGG 0.609710 3_1:+7860184 Msa0346960:CDS
AAATTCTGATGGAAAACAGT+GGG 0.613196 3_1:+7860471 Msa0346960:CDS
AAGAAACAATGAAGACTCAC+CGG 0.615286 3_1:+7857238 Msa0346960:CDS
TCGTCTATGCGAATAGTGAA+GGG 0.615382 3_1:+7860526 Msa0346960:CDS
GATATGGAACTGAAGAAATG+TGG 0.616130 3_1:+7858569 Msa0346960:CDS
TGGATTCTATAGATTTGGAA+GGG 0.617453 3_1:+7859104 Msa0346960:CDS
TGAGCTCATCAAGAAGAAGC+CGG 0.617788 3_1:+7860603 Msa0346960:CDS
AAAATTCTGATGGAAAACAG+TGG 0.620787 3_1:+7860470 Msa0346960:CDS
TGCTCCTTAGCAAATTCACC+AGG 0.628603 3_1:-7858976 None:intergenic
CCTCACTGCATAGCAGCCAA+AGG 0.634621 3_1:-7858858 None:intergenic
CTTATTCATTCAAAACTCCG+AGG 0.640841 3_1:+7858732 Msa0346960:CDS
TCTTTGTCATGAATGGGCGA+GGG 0.647829 3_1:-7859416 None:intergenic
TAGTCCTAGGAAAAGGTCCA+AGG 0.655098 3_1:+7860162 Msa0346960:CDS
GATCAAGAGGAAGCCTGTTG+TGG 0.656312 3_1:+7859167 Msa0346960:CDS
TCGCATAGACGATGATCTGA+CGG 0.661216 3_1:-7860515 None:intergenic
ACATGCTTCTACAAGAGCAG+AGG 0.662151 3_1:+7860231 Msa0346960:CDS
ACGGACAACAATCTGTCACA+TGG 0.662347 3_1:+7860565 Msa0346960:CDS
ATTGCAATGCAGCCTCCACA+GGG 0.663913 3_1:+7859326 Msa0346960:intron
TACTTCACAGCAAAATCACA+AGG 0.676887 3_1:-7860418 None:intergenic
ATGGAACTGAAGAAATGTGG+AGG 0.681147 3_1:+7858572 Msa0346960:CDS
AAAATGAGATTGAAGAAACG+CGG 0.691481 3_1:+7859947 Msa0346960:CDS
AATCGCCAAGACGAAATATG+CGG 0.738605 3_1:+7860300 Msa0346960:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTCTTAATTATTATATA+TGG + chr3_1:7857432-7857451 Msa0346960:intron 10.0%
!! ATTATTATATAGTGTATGTT+TGG + chr3_1:7857552-7857571 Msa0346960:intron 15.0%
!!! AAAATTTGATTTTGAAACTT+TGG + chr3_1:7857587-7857606 Msa0346960:intron 15.0%
!! TAGATTCAACTTTATTATTA+AGG - chr3_1:7857757-7857776 None:intergenic 15.0%
!!! ATTTTTGTTACATTGATAAT+AGG - chr3_1:7858059-7858078 None:intergenic 15.0%
!! ATGAGTTTATAACAAAATTT+GGG + chr3_1:7858495-7858514 Msa0346960:CDS 15.0%
!! GAATACTATTCTATTTATTA+TGG + chr3_1:7858632-7858651 Msa0346960:CDS 15.0%
!!! TTTTTTTATTCTTATCATCA+GGG - chr3_1:7859512-7859531 None:intergenic 15.0%
!!! ATTTTTTTATTCTTATCATC+AGG - chr3_1:7859513-7859532 None:intergenic 15.0%
!! TAGATTTAGAAAACAAGTTA+GGG - chr3_1:7857508-7857527 None:intergenic 20.0%
!! TTAGATTTAGAAAACAAGTT+AGG - chr3_1:7857509-7857528 None:intergenic 20.0%
!!! TATCTTTTTCTGAATTTGTT+TGG + chr3_1:7858210-7858229 Msa0346960:intron 20.0%
!!! AATTTTGTTATAAACTCATC+TGG - chr3_1:7858494-7858513 None:intergenic 20.0%
!! GATGAGTTTATAACAAAATT+TGG + chr3_1:7858494-7858513 Msa0346960:CDS 20.0%
!!! TATTTAGATTTCAAGTATGA+AGG + chr3_1:7858659-7858678 Msa0346960:CDS 20.0%
!!! ATTTAGATTTCAAGTATGAA+GGG + chr3_1:7858660-7858679 Msa0346960:CDS 20.0%
!!! GGATTTTACTTAATAGTATT+TGG + chr3_1:7858879-7858898 Msa0346960:intron 20.0%
!! GCAATAACTATTATCAATAA+AGG - chr3_1:7859304-7859323 None:intergenic 20.0%
!! ATGAGTTTATAACAAGATTT+GGG + chr3_1:7859873-7859892 Msa0346960:CDS 20.0%
!!! AACAAAAATAAGGGTTTTTT+GGG - chr3_1:7860276-7860295 None:intergenic 20.0%
!!! CGATTTTTGAACAAAAATAA+GGG - chr3_1:7860285-7860304 None:intergenic 20.0%
!!! GGATTTTACTTTATATCTTT+TGG + chr3_1:7860326-7860345 Msa0346960:intron 20.0%
! TATGGCTTTCATAAAATGTT+TGG - chr3_1:7857301-7857320 None:intergenic 25.0%
!! ACTATCTCTTTTATATGATC+TGG - chr3_1:7857333-7857352 None:intergenic 25.0%
! CTAATAAACTGTAACTCAAT+CGG + chr3_1:7857706-7857725 Msa0346960:intron 25.0%
!!! AAAAATCATGTTTTGAGTCA+AGG + chr3_1:7857776-7857795 Msa0346960:intron 25.0%
! ACATAATATCATTTACAGAG+AGG - chr3_1:7858173-7858192 None:intergenic 25.0%
!! AATTTTTGCGAAAGAAAACT+TGG - chr3_1:7858598-7858617 None:intergenic 25.0%
!! AAGTTTTCTTTCGCAAAAAT+TGG + chr3_1:7858597-7858616 Msa0346960:CDS 25.0%
!!! AACGAAAAGAAGTGTTTTTT+GGG - chr3_1:7858832-7858851 None:intergenic 25.0%
! TGAGTTACATTTATATGTTG+CGG + chr3_1:7858918-7858937 Msa0346960:intron 25.0%
!! TCTTTTAATATCTGAACTGT+TGG + chr3_1:7859267-7859286 Msa0346960:intron 25.0%
! GCATTAAAAATATTCAGCTT+TGG + chr3_1:7859551-7859570 Msa0346960:intron 25.0%
! ACTACTTCAAAACATCAAAT+TGG + chr3_1:7859766-7859785 Msa0346960:intron 25.0%
! CTACTTCAAAACATCAAATT+GGG + chr3_1:7859767-7859786 Msa0346960:intron 25.0%
! TACTTCAAAACATCAAATTG+GGG + chr3_1:7859768-7859787 Msa0346960:intron 25.0%
! CTATAATACCAAACTTCAAA+AGG - chr3_1:7859815-7859834 None:intergenic 25.0%
!! AATCTTGTTATAAACTCATC+TGG - chr3_1:7859872-7859891 None:intergenic 25.0%
! GATGAGTTTATAACAAGATT+TGG + chr3_1:7859872-7859891 Msa0346960:CDS 25.0%
! TTTGCAAAATACTATTCGTT+AGG + chr3_1:7860004-7860023 Msa0346960:CDS 25.0%
! AAATACTATTCGTTAGGATA+TGG + chr3_1:7860010-7860029 Msa0346960:CDS 25.0%
! TACCTATCTTTCAAATACAA+AGG + chr3_1:7860037-7860056 Msa0346960:CDS 25.0%
! ACCTATCTTTCAAATACAAA+GGG + chr3_1:7860038-7860057 Msa0346960:CDS 25.0%
!!! GAACAAAAATAAGGGTTTTT+TGG - chr3_1:7860277-7860296 None:intergenic 25.0%
!! GCGATTTTTGAACAAAAATA+AGG - chr3_1:7860286-7860305 None:intergenic 25.0%
!! GGGATTTCCTAATTTTATAA+CGG + chr3_1:7860546-7860565 Msa0346960:CDS 25.0%
! TTGTTGTCCGTTATAAAATT+AGG - chr3_1:7860556-7860575 None:intergenic 25.0%
! AAATGTTTGGAATCTTTCTC+CGG - chr3_1:7857288-7857307 None:intergenic 30.0%
! ATCTCTTTTATATGATCTGG+AGG - chr3_1:7857330-7857349 None:intergenic 30.0%
!! TTTGGAATCATTTTTGTGGA+AGG - chr3_1:7857842-7857861 None:intergenic 30.0%
!! CATGTTTGGAATCATTTTTG+TGG - chr3_1:7857846-7857865 None:intergenic 30.0%
GAGAGTAGTTACTTAAATTG+TGG + chr3_1:7857887-7857906 Msa0346960:intron 30.0%
TCTTTAACTGTGAAACTTTG+AGG + chr3_1:7858123-7858142 Msa0346960:intron 30.0%
! TGAATTTGTTTGGACATTCA+AGG + chr3_1:7858220-7858239 Msa0346960:intron 30.0%
!! TTAGTGTGTCTTTAGTTCTA+AGG + chr3_1:7858276-7858295 Msa0346960:intron 30.0%
!! TAGTTCTAAGGTTCTCAAAA+TGG + chr3_1:7858288-7858307 Msa0346960:intron 30.0%
CTTCAACTAAAGTTCTTGTT+TGG - chr3_1:7858351-7858370 None:intergenic 30.0%
!!! GAACGAAAAGAAGTGTTTTT+TGG - chr3_1:7858833-7858852 None:intergenic 30.0%
!!! TGATAATTTTGGAGCATGAA+CGG - chr3_1:7859018-7859037 None:intergenic 30.0%
TTCATGCTCCAAAATTATCA+AGG + chr3_1:7859018-7859037 Msa0346960:CDS 30.0%
!! ACTGCTTTCCTTGATAATTT+TGG - chr3_1:7859029-7859048 None:intergenic 30.0%
AAAATTATCAAGGAAAGCAG+TGG + chr3_1:7859028-7859047 Msa0346960:CDS 30.0%
AAATTATCAAGGAAAGCAGT+GGG + chr3_1:7859029-7859048 Msa0346960:CDS 30.0%
!! ACTAGTGGATTCTATAGATT+TGG + chr3_1:7859099-7859118 Msa0346960:CDS 30.0%
TGGATTCTATAGATTTGGAA+GGG + chr3_1:7859104-7859123 Msa0346960:CDS 30.0%
AAGGGAAAACAATCTATCAA+AGG + chr3_1:7859122-7859141 Msa0346960:CDS 30.0%
AATGACAGAAAAGGAAGTTA+GGG + chr3_1:7859364-7859383 Msa0346960:CDS 30.0%
ACTATCTCTTTGTCATGAAT+GGG - chr3_1:7859425-7859444 None:intergenic 30.0%
TACTATCTCTTTGTCATGAA+TGG - chr3_1:7859426-7859445 None:intergenic 30.0%
CTAGACACCAATATTTGATT+TGG - chr3_1:7859724-7859743 None:intergenic 30.0%
AATACCAAACTTCAAAAGGA+GGG - chr3_1:7859811-7859830 None:intergenic 30.0%
TAATACCAAACTTCAAAAGG+AGG - chr3_1:7859812-7859831 None:intergenic 30.0%
AAAATGAGATTGAAGAAACG+CGG + chr3_1:7859947-7859966 Msa0346960:CDS 30.0%
! ACATTTTCTTTTGCAACGAA+TGG + chr3_1:7859975-7859994 Msa0346960:CDS 30.0%
TCCCTTTGTATTTGAAAGAT+AGG - chr3_1:7860042-7860061 None:intergenic 30.0%
!!! GTAACACTTGAAGTTTTGAA+TGG - chr3_1:7860118-7860137 None:intergenic 30.0%
TTCAAAACTTCAAGTGTTAC+TGG + chr3_1:7860118-7860137 Msa0346960:CDS 30.0%
!!! GTTTTTTGGGTTGAATTCAT+TGG - chr3_1:7860263-7860282 None:intergenic 30.0%
AATGGATGAGATCAATTTAG+TGG - chr3_1:7860386-7860405 None:intergenic 30.0%
! ACTGTTTTCCATCAGAATTT+TGG - chr3_1:7860471-7860490 None:intergenic 30.0%
AAAATTCTGATGGAAAACAG+TGG + chr3_1:7860470-7860489 Msa0346960:CDS 30.0%
AAATTCTGATGGAAAACAGT+GGG + chr3_1:7860471-7860490 Msa0346960:CDS 30.0%
AAGAAACAATGAAGACTCAC+CGG + chr3_1:7857238-7857257 Msa0346960:CDS 35.0%
! TCTTTTATATGATCTGGAGG+AGG - chr3_1:7857327-7857346 None:intergenic 35.0%
ACTCTAACTGTCAAACTTTG+AGG + chr3_1:7857394-7857413 Msa0346960:intron 35.0%
ATAAATGTGTAACCCCTCTT+TGG + chr3_1:7857917-7857936 Msa0346960:intron 35.0%
TAGAACCAAACTTCCAAAGA+GGG - chr3_1:7857933-7857952 None:intergenic 35.0%
TTAGAACCAAACTTCCAAAG+AGG - chr3_1:7857934-7857953 None:intergenic 35.0%
GTCTCTAAACTTCAAAAGAG+AGG - chr3_1:7858421-7858440 None:intergenic 35.0%
CAACTCATCTGTTACAGTAT+AGG - chr3_1:7858443-7858462 None:intergenic 35.0%
GATATGGAACTGAAGAAATG+TGG + chr3_1:7858569-7858588 Msa0346960:CDS 35.0%
CTTATTCATTCAAAACTCCG+AGG + chr3_1:7858732-7858751 Msa0346960:CDS 35.0%
!!! GTTTTTTGGGTTGATTCCAT+TGG - chr3_1:7858819-7858838 None:intergenic 35.0%
!!! ATTCGCATTGCTGATTTTCT+TGG - chr3_1:7859078-7859097 None:intergenic 35.0%
GTGGATTCTATAGATTTGGA+AGG + chr3_1:7859103-7859122 Msa0346960:CDS 35.0%
!! TTCCTTTTCTGTCATTGACT+GGG - chr3_1:7859360-7859379 None:intergenic 35.0%
CAATGACAGAAAAGGAAGTT+AGG + chr3_1:7859363-7859382 Msa0346960:CDS 35.0%
GGAATCCAAACATTTCAAGA+AGG + chr3_1:7859385-7859404 Msa0346960:CDS 35.0%
TATGGCCTTCTTGAAATGTT+TGG - chr3_1:7859393-7859412 None:intergenic 35.0%
TTGTCAATGTCTCTGTGATT+TGG + chr3_1:7859576-7859595 Msa0346960:intron 35.0%
! AAACTGTGTCATTGGATTGT+TGG + chr3_1:7859617-7859636 Msa0346960:intron 35.0%
TCTAACTTGGAGGTTGTATT+TGG - chr3_1:7859654-7859673 None:intergenic 35.0%
! TAGTTTCAGTTCTAACTTGG+AGG - chr3_1:7859664-7859683 None:intergenic 35.0%
TCCAAGTTAGAACTGAAACT+AGG + chr3_1:7859663-7859682 Msa0346960:intron 35.0%
GACGTGTCCAAATCAAATAT+TGG + chr3_1:7859714-7859733 Msa0346960:intron 35.0%
TTGAAACAAGTGAGTGTCAT+GGG + chr3_1:7860185-7860204 Msa0346960:CDS 35.0%
TACTTCACAGCAAAATCACA+AGG - chr3_1:7860421-7860440 None:intergenic 35.0%
!!! TCAGAATTTTGGAGCTTTGT+AGG - chr3_1:7860460-7860479 None:intergenic 35.0%
ACAAAGCTCCAAAATTCTGA+TGG + chr3_1:7860460-7860479 Msa0346960:CDS 35.0%
TCTCCATGAATCCAAAACAC+AGG - chr3_1:7857622-7857641 None:intergenic 40.0%
GCTTCAGCTAAGTACATGTT+TGG - chr3_1:7857860-7857879 None:intergenic 40.0%
AGAACCAAACTTCCAAAGAG+GGG - chr3_1:7857932-7857951 None:intergenic 40.0%
ATGGAACTGAAGAAATGTGG+AGG + chr3_1:7858572-7858591 Msa0346960:CDS 40.0%
TTCAAAACTCCGAGGACTAA+TGG + chr3_1:7858740-7858759 Msa0346960:CDS 40.0%
!! TTTGGTTCTCCATTAGTCCT+CGG - chr3_1:7858752-7858771 None:intergenic 40.0%
CACTGCTTCCAAAAGATCAA+AGG + chr3_1:7858787-7858806 Msa0346960:CDS 40.0%
! TCTTTTCGTTCCAAAGCCTT+TGG + chr3_1:7858842-7858861 Msa0346960:CDS 40.0%
AGGAACATACTACACAATGG+AGG - chr3_1:7858959-7858978 None:intergenic 40.0%
TCCATTGTGTAGTATGTTCC+TGG + chr3_1:7858958-7858977 Msa0346960:intron 40.0%
ACCAGGAACATACTACACAA+TGG - chr3_1:7858962-7858981 None:intergenic 40.0%
!! TGTTCCTGGTGAATTTGCTA+AGG + chr3_1:7858972-7858991 Msa0346960:CDS 40.0%
TCAGCAATGCGAATTACTAG+TGG + chr3_1:7859084-7859103 Msa0346960:CDS 40.0%
ACAACTTTGAGCTGATCAAG+AGG + chr3_1:7859154-7859173 Msa0346960:CDS 40.0%
! GTAACTTGTAACACCACAAC+AGG - chr3_1:7859183-7859202 None:intergenic 40.0%
ACAAGTTACTGCTTCTTGCA+CGG + chr3_1:7859194-7859213 Msa0346960:CDS 40.0%
! CTTCCTTTTCTGTCATTGAC+TGG - chr3_1:7859361-7859380 None:intergenic 40.0%
GACAGCAACTCAAAACAGAA+AGG - chr3_1:7859455-7859474 None:intergenic 40.0%
ATGACTCGAAACTGTGTCAT+TGG + chr3_1:7859609-7859628 Msa0346960:intron 40.0%
ATTGGATTGTTGGAGACGAA+AGG + chr3_1:7859627-7859646 Msa0346960:intron 40.0%
! GCCTAGTTTCAGTTCTAACT+TGG - chr3_1:7859667-7859686 None:intergenic 40.0%
!!! GTTACCCTCCTTTTGAAGTT+TGG + chr3_1:7859804-7859823 Msa0346960:intron 40.0%
! ATTTTCCAATCACGACCATC+AGG - chr3_1:7859932-7859951 None:intergenic 40.0%
ACACTCACTTGTTTCAACCT+TGG - chr3_1:7860182-7860201 None:intergenic 40.0%
GTTGAAACAAGTGAGTGTCA+TGG + chr3_1:7860184-7860203 Msa0346960:CDS 40.0%
AAGTGAGTGTCATGGGAAAA+AGG + chr3_1:7860192-7860211 Msa0346960:CDS 40.0%
! AGCATGTTTAGACACGCTTT+TGG - chr3_1:7860218-7860237 None:intergenic 40.0%
AATCGCCAAGACGAAATATG+CGG + chr3_1:7860300-7860319 Msa0346960:CDS 40.0%
ACAAGGAACATACTGCACAA+TGG - chr3_1:7860404-7860423 None:intergenic 40.0%
! TGGAGCTTTGTAGGAACATT+TGG - chr3_1:7860451-7860470 None:intergenic 40.0%
ATCGTCTATGCGAATAGTGA+AGG + chr3_1:7860525-7860544 Msa0346960:CDS 40.0%
TCGTCTATGCGAATAGTGAA+GGG + chr3_1:7860526-7860545 Msa0346960:CDS 40.0%
ATTGTGACTTCTAGCACAAC+CGG - chr3_1:7860625-7860644 None:intergenic 40.0%
ATGATCTGGAGGAGGAAGTA+TGG - chr3_1:7857319-7857338 None:intergenic 45.0%
! GGTTGATTGAGCCTGTGTTT+TGG + chr3_1:7857608-7857627 Msa0346960:intron 45.0%
!! GAGCCTGTGTTTTGGATTCA+TGG + chr3_1:7857616-7857635 Msa0346960:intron 45.0%
! GTAACCCCTCTTTGGAAGTT+TGG + chr3_1:7857925-7857944 Msa0346960:intron 45.0%
GTGCTCGGACACTTTATGTT+TGG - chr3_1:7858770-7858789 None:intergenic 45.0%
!! GATCTTTTGGAAGCAGTGCT+CGG - chr3_1:7858785-7858804 None:intergenic 45.0%
! GGCAGCATCCTTTGATCTTT+TGG - chr3_1:7858798-7858817 None:intergenic 45.0%
AGATCAAAGGATGCTGCCAA+TGG + chr3_1:7858800-7858819 Msa0346960:CDS 45.0%
TGCTCCTTAGCAAATTCACC+AGG - chr3_1:7858979-7858998 None:intergenic 45.0%
TGGAGCATGAACGGAACATA+TGG - chr3_1:7859009-7859028 None:intergenic 45.0%
!! GTGGGAAGTTTCTGGTGTAT+TGG + chr3_1:7859047-7859066 Msa0346960:CDS 45.0%
TGCCCAGTCAATGACAGAAA+AGG + chr3_1:7859355-7859374 Msa0346960:CDS 45.0%
TCTTTGTCATGAATGGGCGA+GGG - chr3_1:7859419-7859438 None:intergenic 45.0%
CTGCAGTGATAACAGCTCAT+TGG - chr3_1:7859843-7859862 None:intergenic 45.0%
GCTACAGTTACAGTTCCTGA+TGG + chr3_1:7859914-7859933 Msa0346960:CDS 45.0%
! GGACTAGCACACTTTGTGTT+TGG - chr3_1:7860148-7860167 None:intergenic 45.0%
ACACAAAGTGTGCTAGTCCT+AGG + chr3_1:7860149-7860168 Msa0346960:CDS 45.0%
AGTGTGCTAGTCCTAGGAAA+AGG + chr3_1:7860155-7860174 Msa0346960:CDS 45.0%
TAGTCCTAGGAAAAGGTCCA+AGG + chr3_1:7860162-7860181 Msa0346960:CDS 45.0%
! TCAACCTTGGACCTTTTCCT+AGG - chr3_1:7860169-7860188 None:intergenic 45.0%
ACATGCTTCTACAAGAGCAG+AGG + chr3_1:7860231-7860250 Msa0346960:CDS 45.0%
!!! AGTGGGAAGTGTTTTGCATG+CGG + chr3_1:7860488-7860507 Msa0346960:CDS 45.0%
TCGCATAGACGATGATCTGA+CGG - chr3_1:7860518-7860537 None:intergenic 45.0%
ACGGACAACAATCTGTCACA+TGG + chr3_1:7860565-7860584 Msa0346960:CDS 45.0%
TGAGCTCATCAAGAAGAAGC+CGG + chr3_1:7860603-7860622 Msa0346960:CDS 45.0%
!!! AAAAATATAATTAATCTTTT+TGG + chr3_1:7858073-7858092 Msa0346960:intron 5.0%
GCGACGGAACATATCTTCTC+CGG - chr3_1:7857260-7857279 None:intergenic 50.0%
GAGAAGATATGTTCCGTCGC+CGG + chr3_1:7857260-7857279 Msa0346960:CDS 50.0%
TTGGAATCTTTCTCCGGCTC+CGG - chr3_1:7857282-7857301 None:intergenic 50.0%
GCTACCATTACTGTTCCCGA+TGG + chr3_1:7858536-7858555 Msa0346960:CDS 50.0%
ACGACCATCGGGAACAGTAA+TGG - chr3_1:7858543-7858562 None:intergenic 50.0%
ATATCCCACTCACGACCATC+GGG - chr3_1:7858554-7858573 None:intergenic 50.0%
CATATCCCACTCACGACCAT+CGG - chr3_1:7858555-7858574 None:intergenic 50.0%
TGCATAGCAGCCAAAGGCTT+TGG - chr3_1:7858855-7858874 None:intergenic 50.0%
GGAAAGCAGTGGGAAGTTTC+TGG + chr3_1:7859039-7859058 Msa0346960:CDS 50.0%
GATCAAGAGGAAGCCTGTTG+TGG + chr3_1:7859167-7859186 Msa0346960:CDS 50.0%
TATTGCAATGCAGCCTCCAC+AGG + chr3_1:7859325-7859344 Msa0346960:intron 50.0%
ATTGCAATGCAGCCTCCACA+GGG + chr3_1:7859326-7859345 Msa0346960:intron 50.0%
ATGAATGGGCGAGGGAAGTA+TGG - chr3_1:7859411-7859430 None:intergenic 50.0%
CTCTTTGTCATGAATGGGCG+AGG - chr3_1:7859420-7859439 None:intergenic 50.0%
CAGTTCCTGATGGTCGTGAT+TGG + chr3_1:7859924-7859943 Msa0346960:CDS 50.0%
CCTCACCGCATATTTCGTCT+TGG - chr3_1:7860308-7860327 None:intergenic 50.0%
CCAAGACGAAATATGCGGTG+AGG + chr3_1:7860305-7860324 Msa0346960:intron 50.0%
TGTTCCCGATGGTCGTGAGT+GGG + chr3_1:7858547-7858566 Msa0346960:CDS 55.0%
CGATGGTCGTGAGTGGGATA+TGG + chr3_1:7858553-7858572 Msa0346960:CDS 55.0%
CCTCACTGCATAGCAGCCAA+AGG - chr3_1:7858861-7858880 None:intergenic 55.0%
CCTTTGGCTGCTATGCAGTG+AGG + chr3_1:7858858-7858877 Msa0346960:intron 55.0%
ATATGTTCCGTCGCCGGAGC+CGG + chr3_1:7857266-7857285 Msa0346960:CDS 60.0%
CTGTTCCCGATGGTCGTGAG+TGG + chr3_1:7858546-7858565 Msa0346960:CDS 60.0%
CAATGCAGCCTCCACAGGGA+AGG + chr3_1:7859330-7859349 Msa0346960:intron 60.0%
TCTTTCTCCGGCTCCGGCGA+CGG - chr3_1:7857276-7857295 None:intergenic 65.0%
TGGGCACGCCTTCCCTGTGG+AGG - chr3_1:7859341-7859360 None:intergenic 70.0%
GACTGGGCACGCCTTCCCTG+TGG - chr3_1:7859344-7859363 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 7857180 7860672 7857180 ID=Msa0346960;Name=Msa0346960
chr3_1 mRNA 7857180 7860672 7857180 ID=Msa0346960-mRNA-1;Parent=Msa0346960;Name=Msa0346960-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0.6|0.16|1|1|1|6|0|543
chr3_1 exon 7857180 7857350 7857180 ID=Msa0346960-mRNA-1:exon:2187;Parent=Msa0346960-mRNA-1
chr3_1 exon 7858485 7858874 7858485 ID=Msa0346960-mRNA-1:exon:2188;Parent=Msa0346960-mRNA-1
chr3_1 exon 7858970 7859215 7858970 ID=Msa0346960-mRNA-1:exon:2189;Parent=Msa0346960-mRNA-1
chr3_1 exon 7859338 7859442 7859338 ID=Msa0346960-mRNA-1:exon:2190;Parent=Msa0346960-mRNA-1
chr3_1 exon 7859863 7860321 7859863 ID=Msa0346960-mRNA-1:exon:2191;Parent=Msa0346960-mRNA-1
chr3_1 exon 7860412 7860672 7860412 ID=Msa0346960-mRNA-1:exon:2192;Parent=Msa0346960-mRNA-1
chr3_1 CDS 7857180 7857350 7857180 ID=Msa0346960-mRNA-1:cds;Parent=Msa0346960-mRNA-1
chr3_1 CDS 7858485 7858874 7858485 ID=Msa0346960-mRNA-1:cds;Parent=Msa0346960-mRNA-1
chr3_1 CDS 7858970 7859215 7858970 ID=Msa0346960-mRNA-1:cds;Parent=Msa0346960-mRNA-1
chr3_1 CDS 7859338 7859442 7859338 ID=Msa0346960-mRNA-1:cds;Parent=Msa0346960-mRNA-1
chr3_1 CDS 7859863 7860321 7859863 ID=Msa0346960-mRNA-1:cds;Parent=Msa0346960-mRNA-1
chr3_1 CDS 7860412 7860672 7860412 ID=Msa0346960-mRNA-1:cds;Parent=Msa0346960-mRNA-1
Gene Sequence

>Msa0346960

TTAACTTACTTTCAAGTTTCAACACATTGCATTTCACTTATTATTACTATTTGCAACAAAGAAACAATGAAGACTCACCGGAGAAGATATGTTCCGTCGCCGGAGCCGGAGAAAGATTCCAAACATTTTATGAAAGCCATACTTCCTCCTCCAGATCATATAAAAGAGATAAGAATTCCAGATGAGTTTATAACAAAATTTGGGAATGAACTCGACAATGTTGCTACCATTACTGTTCCCGATGGTCGTGAGTGGGATATGGAACTGAAGAAATGTGGAGGCCAAGTTTTCTTTCGCAAAAATTGGCAACAGTTTGCAGAATACTATTCTATTTATTATGGTTGTTATTTAGATTTCAAGTATGAAGGGAATTCAAAGTTTAATGTTGTTATATATGATACAACTTCTGTTGAGATTTCTTATTCATTCAAAACTCCGAGGACTAATGGAGAACCAAACATAAAGTGTCCGAGCACTGCTTCCAAAAGATCAAAGGATGCTGCCAATGGAATCAACCCAAAAAACACTTCTTTTCGTTCCAAAGCCTTTGGCTGCTATGCATATGTTCCTGGTGAATTTGCTAAGGAGCATCTGAAGCCATATGTTCCGTTCATGCTCCAAAATTATCAAGGAAAGCAGTGGGAAGTTTCTGGTGTATTGGATAGACCAAGAAAATCAGCAATGCGAATTACTAGTGGATTCTATAGATTTGGAAGGGAAAACAATCTATCAAAGGAAGTTTTATACAACTTTGAGCTGATCAAGAGGAAGCCTGTTGTGGTGTTACAAGTTACTGCTTCTTGCACGCCTCCACAGGGAAGGCGTGCCCAGTCAATGACAGAAAAGGAAGTTAGGGAATCCAAACATTTCAAGAAGGCCATACTTCCCTCGCCCATTCATGACAAAGAGATAAGAATTCCAGATGAGTTTATAACAAGATTTGGGAACGAACTCAAGAATGTTGCTACAGTTACAGTTCCTGATGGTCGTGATTGGAAAATGAGATTGAAGAAACGCGGCAATGACATTTTCTTTTGCAACGAATGGCAAGAGTTTGCAAAATACTATTCGTTAGGATATGGTTGCTACCTATCTTTCAAATACAAAGGGAATTCAAAGTTTAGTGTTATTATATTTGACGTGACTTCTGTTGAGATTTGTTATCCATTCAAAACTTCAAGTGTTACTGGAGAACCAAACACAAAGTGTGCTAGTCCTAGGAAAAGGTCCAAGGTTGAAACAAGTGAGTGTCATGGGAAAAAGGCCAAAAGCGTGTCTAAACATGCTTCTACAAGAGCAGAGGTTGCTGCCAATGAATTCAACCCAAAAAACCCTTATTTTTGTTCAAAAATCGCCAAGACGAAATATGCGTATGTTCCTTGTGATTTTGCTGTGAAGTATCTGAAACCAAATGTTCCTACAAAGCTCCAAAATTCTGATGGAAAACAGTGGGAAGTGTTTTGCATGCGGAATACCGTCAGATCATCGTCTATGCGAATAGTGAAGGGATTTCCTAATTTTATAACGGACAACAATCTGTCACATGGAGATTATTGTGTGTATGAGCTCATCAAGAAGAAGCCGGTTGTGCTAGAAGTCACAATGTTTCGTGCAGTTGACTATCTTGACTAA
Protein sequence

>Msa0346960

LTYFQVSTHCISLIITICNKETMKTHRRRYVPSPEPEKDSKHFMKAILPPPDHIKEIRIPDEFITKFGNELDNVATITVPDGREWDMELKKCGGQVFFRKNWQQFAEYYSIYYGCYLDFKYEGNSKFNVVIYDTTSVEISYSFKTPRTNGEPNIKCPSTASKRSKDAANGINPKNTSFRSKAFGCYAYVPGEFAKEHLKPYVPFMLQNYQGKQWEVSGVLDRPRKSAMRITSGFYRFGRENNLSKEVLYNFELIKRKPVVVLQVTASCTPPQGRRAQSMTEKEVRESKHFKKAILPSPIHDKEIRIPDEFITRFGNELKNVATVTVPDGRDWKMRLKKRGNDIFFCNEWQEFAKYYSLGYGCYLSFKYKGNSKFSVIIFDVTSVEICYPFKTSSVTGEPNTKCASPRKRSKVETSECHGKKAKSVSKHASTRAEVAANEFNPKNPYFCSKIAKTKYAYVPCDFAVKYLKPNVPTKLQNSDGKQWEVFCMRNTVRSSSMRIVKGFPNFITDNNLSHGDYCVYELIKKKPVVLEVTMFRAVDYLD*