Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355690 | KEH33323.1 | 80.084 | 477 | 39 | 3 | 1 | 429 | 1 | 469 | 0.0 | 754 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355690 | sp|P93755|C3H30_ARATH | 45.093 | 377 | 135 | 5 | 25 | 337 | 33 | 401 | 3.38e-89 | 288 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355690 | A0A072UW95 | 80.084 | 477 | 39 | 3 | 1 | 429 | 1 | 469 | 0.0 | 754 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0355690 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355690 | MtrunA17_Chr3g0092171 | 77.149 | 477 | 39 | 4 | 1 | 429 | 52 | 506 | 0.0 | 716 |
| Msa0355690 | MtrunA17_Chr3g0088521 | 57.778 | 495 | 92 | 8 | 1 | 378 | 1 | 495 | 5.91e-153 | 451 |
| Msa0355690 | MtrunA17_Chr3g0088521 | 67.857 | 56 | 17 | 1 | 374 | 428 | 626 | 681 | 7.29e-16 | 80.1 |
| Msa0355690 | MtrunA17_Chr3g0092221 | 51.860 | 430 | 81 | 11 | 88 | 429 | 12 | 403 | 4.46e-122 | 360 |
| Msa0355690 | MtrunA17_Chr7g0257831 | 42.827 | 467 | 149 | 10 | 26 | 378 | 33 | 495 | 3.28e-99 | 312 |
| Msa0355690 | MtrunA17_Chr7g0257831 | 45.333 | 75 | 40 | 1 | 355 | 428 | 601 | 675 | 7.31e-11 | 64.3 |
| Msa0355690 | MtrunA17_Chr1g0171151 | 40.302 | 464 | 150 | 8 | 24 | 372 | 15 | 466 | 2.44e-94 | 296 |
| Msa0355690 | MtrunA17_Chr5g0437251 | 37.730 | 326 | 132 | 4 | 38 | 313 | 28 | 332 | 1.25e-61 | 211 |
| Msa0355690 | MtrunA17_Chr1g0187591 | 38.272 | 324 | 144 | 5 | 37 | 313 | 30 | 344 | 3.92e-55 | 193 |
| Msa0355690 | MtrunA17_Chr5g0430211 | 34.422 | 398 | 182 | 8 | 1 | 343 | 1 | 374 | 1.99e-53 | 189 |
| Msa0355690 | MtrunA17_Chr3g0105101 | 34.437 | 302 | 135 | 3 | 26 | 305 | 11 | 271 | 4.40e-48 | 169 |
| Msa0355690 | MtrunA17_Chr3g0113651 | 32.915 | 319 | 115 | 4 | 38 | 309 | 8 | 274 | 7.83e-47 | 168 |
| Msa0355690 | MtrunA17_Chr3g0105131 | 34.471 | 293 | 117 | 5 | 42 | 301 | 19 | 269 | 4.67e-43 | 158 |
| Msa0355690 | MtrunA17_Chr3g0105141 | 39.695 | 131 | 31 | 1 | 224 | 306 | 15 | 145 | 3.15e-24 | 98.6 |
| Msa0355690 | MtrunA17_Chr3g0135351 | 32.420 | 219 | 122 | 6 | 215 | 429 | 82 | 278 | 1.61e-21 | 94.0 |
| Msa0355690 | MtrunA17_Chr8g0389561 | 62.903 | 62 | 22 | 1 | 251 | 311 | 134 | 195 | 2.52e-20 | 92.0 |
| Msa0355690 | MtrunA17_Chr6g0487481 | 64.407 | 59 | 20 | 1 | 242 | 300 | 148 | 205 | 7.04e-20 | 90.9 |
| Msa0355690 | MtrunA17_Chr3g0105121 | 54.286 | 70 | 32 | 0 | 246 | 315 | 58 | 127 | 1.44e-19 | 89.7 |
| Msa0355690 | MtrunA17_Chr2g0324781 | 67.347 | 49 | 16 | 0 | 252 | 300 | 131 | 179 | 8.51e-18 | 85.1 |
| Msa0355690 | MtrunA17_Chr4g0040391 | 62.000 | 50 | 19 | 0 | 251 | 300 | 113 | 162 | 2.60e-17 | 82.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0355690 | AT2G41900.1 | 45.093 | 377 | 135 | 5 | 25 | 337 | 33 | 401 | 3.44e-90 | 288 |
| Msa0355690 | AT5G12850.1 | 40.618 | 421 | 157 | 11 | 1 | 341 | 1 | 408 | 1.87e-79 | 259 |
| Msa0355690 | AT3G55980.1 | 35.514 | 321 | 132 | 3 | 40 | 311 | 30 | 324 | 9.03e-56 | 194 |
| Msa0355690 | AT3G55980.2 | 35.514 | 321 | 132 | 3 | 40 | 311 | 97 | 391 | 2.66e-55 | 194 |
| Msa0355690 | AT5G58620.1 | 36.308 | 325 | 148 | 6 | 37 | 313 | 11 | 324 | 5.78e-55 | 192 |
| Msa0355690 | AT2G40140.2 | 32.791 | 430 | 193 | 12 | 1 | 377 | 1 | 387 | 8.58e-55 | 192 |
| Msa0355690 | AT2G40140.1 | 32.791 | 430 | 193 | 12 | 1 | 377 | 1 | 387 | 8.58e-55 | 192 |
| Msa0355690 | AT5G07500.1 | 39.062 | 128 | 31 | 1 | 227 | 307 | 34 | 161 | 2.26e-21 | 93.2 |
| Msa0355690 | AT2G25900.2 | 64.407 | 59 | 20 | 1 | 242 | 300 | 135 | 192 | 1.68e-20 | 92.0 |
| Msa0355690 | AT2G25900.1 | 64.407 | 59 | 20 | 1 | 242 | 300 | 135 | 192 | 1.68e-20 | 92.0 |
| Msa0355690 | AT1G03790.1 | 56.944 | 72 | 28 | 1 | 245 | 313 | 130 | 201 | 5.65e-19 | 88.6 |
| Msa0355690 | AT5G44260.1 | 60.714 | 56 | 22 | 0 | 245 | 300 | 108 | 163 | 2.93e-17 | 83.6 |
| Msa0355690 | AT2G19810.1 | 57.627 | 59 | 24 | 1 | 242 | 300 | 123 | 180 | 3.45e-17 | 83.2 |
| Msa0355690 | AT4G29190.1 | 55.556 | 63 | 27 | 1 | 242 | 304 | 124 | 185 | 4.16e-17 | 82.8 |
Find 93 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGGATGCTGCCACCATTAA+AGG | 0.199663 | 3_1:+30514667 | None:intergenic |
| ACCAAAGTCATTTCCATTTA+CGG | 0.262627 | 3_1:+30513498 | None:intergenic |
| CGAGGACAGAACCCCTTTAA+TGG | 0.267222 | 3_1:-30514680 | Msa0355690:CDS |
| AAACCTGATTGGTCCGTAAA+TGG | 0.274186 | 3_1:-30513511 | Msa0355690:CDS |
| TTCTGTCCTCGAGAACAATT+TGG | 0.340744 | 3_1:+30514692 | None:intergenic |
| CTTCCGCTGTCTTGTGAAAA+GGG | 0.344829 | 3_1:-30514337 | Msa0355690:CDS |
| ACCTGGTGTGTCCGTCAAAA+TGG | 0.347353 | 3_1:-30514721 | Msa0355690:CDS |
| GCTTCCGCTGTCTTGTGAAA+AGG | 0.357025 | 3_1:-30514338 | Msa0355690:CDS |
| TATATGCTGTTTCGTATATC+AGG | 0.367270 | 3_1:+30514223 | None:intergenic |
| TATCTTAGTTGACAAGAGAT+TGG | 0.368449 | 3_1:+30513410 | None:intergenic |
| AGCTTATGGGGAACGACAAT+TGG | 0.370548 | 3_1:+30514433 | None:intergenic |
| TATGCAAATGGCCTCTTTGA+TGG | 0.380891 | 3_1:-30513643 | Msa0355690:CDS |
| TCAGGAATTGATGGATCAAT+TGG | 0.382999 | 3_1:+30514241 | None:intergenic |
| CTGTTTCTCACAGCCCCGTC+CGG | 0.385820 | 3_1:-30513593 | Msa0355690:CDS |
| TTTCACGATTTCGAGCTTAT+GGG | 0.393900 | 3_1:+30514420 | None:intergenic |
| AGCAGATGCAGCTGATCTAA+TGG | 0.394681 | 3_1:+30513768 | None:intergenic |
| GATTGGACCCAAGATATATC+AGG | 0.394954 | 3_1:+30513427 | None:intergenic |
| TTGAAGAGCCTGATATATCT+TGG | 0.396118 | 3_1:-30513435 | Msa0355690:CDS |
| TTGATAGTGAACCACGATAA+AGG | 0.398563 | 3_1:+30513713 | None:intergenic |
| ATACTTTCATCTTCTGAGGC+TGG | 0.405920 | 3_1:-30514619 | Msa0355690:CDS |
| TTTCCATTTACGGACCAATC+AGG | 0.419002 | 3_1:+30513508 | None:intergenic |
| CACTGAAATGGTACCCGGAC+GGG | 0.432326 | 3_1:+30513579 | None:intergenic |
| TCTAAGTGGGGATCTCATAC+TGG | 0.434509 | 3_1:-30513535 | Msa0355690:CDS |
| ATCTATTGTGTGGATGCTAA+TGG | 0.442376 | 3_1:-30514484 | Msa0355690:CDS |
| AGGATGCTGCCACCATTAAA+GGG | 0.443121 | 3_1:+30514668 | None:intergenic |
| TTTCGTATATCAGGAATTGA+TGG | 0.454148 | 3_1:+30514232 | None:intergenic |
| CTCATACTGGTAAACCTGAT+TGG | 0.455830 | 3_1:-30513522 | Msa0355690:CDS |
| GCAGCCATGTCCATGACAAT+AGG | 0.459445 | 3_1:+30513745 | None:intergenic |
| GCTGATGAGTCTGTTGATGA+TGG | 0.472701 | 3_1:-30514364 | Msa0355690:CDS |
| AGATACAAAGGCTGTGCAAA+AGG | 0.480808 | 3_1:+30513667 | None:intergenic |
| AACAGACCGACTCACTGAAA+TGG | 0.484349 | 3_1:+30513567 | None:intergenic |
| ATTGTTTCCATGCTGAAAAG+AGG | 0.484399 | 3_1:+30513459 | None:intergenic |
| AGGCTTGTGCGATACTGATC+TGG | 0.489915 | 3_1:+30513871 | None:intergenic |
| CGCACAAGCCTTTGCAAAGA+GGG | 0.495365 | 3_1:-30513859 | Msa0355690:CDS |
| ACAGCTGTGTCGGTAAACTT+TGG | 0.503937 | 3_1:+30514292 | None:intergenic |
| AGAAGCATGTTCAAGTAAGC+TGG | 0.506422 | 3_1:+30514810 | None:intergenic |
| CCTTTGTATCTATATGCAAA+TGG | 0.509335 | 3_1:-30513655 | Msa0355690:CDS |
| TCCGTAAATGGAAATGACTT+TGG | 0.511355 | 3_1:-30513499 | Msa0355690:CDS |
| CTGTGCTGCTTCGAGTGGTA+CGG | 0.514258 | 3_1:-30514554 | Msa0355690:CDS |
| TGTTAACTCCTCGTCTAAGT+GGG | 0.516543 | 3_1:-30513548 | Msa0355690:CDS |
| TGTTTCTCACAGCCCCGTCC+GGG | 0.517747 | 3_1:-30513592 | Msa0355690:CDS |
| TGAAGAGCCTGATATATCTT+GGG | 0.518053 | 3_1:-30513434 | Msa0355690:CDS |
| TTAACTTCATCTGCTTTAGG+AGG | 0.519398 | 3_1:-30514889 | Msa0355690:CDS |
| GAAATAGGAATTGCAGACGC+GGG | 0.527252 | 3_1:-30513939 | Msa0355690:CDS |
| TTTGGAGCCACAGGAGAGGA+TGG | 0.530352 | 3_1:+30514310 | None:intergenic |
| CTGTTAACTCCTCGTCTAAG+TGG | 0.534143 | 3_1:-30513549 | Msa0355690:CDS |
| ACTGAAATGGTACCCGGACG+GGG | 0.536002 | 3_1:+30513580 | None:intergenic |
| CTCATGGAGTATTCGAGACC+TGG | 0.539512 | 3_1:-30513900 | Msa0355690:CDS |
| TCGGTAAACTTTGGAGCCAC+AGG | 0.542025 | 3_1:+30514301 | None:intergenic |
| AACTAGTACCCTCTTTGCAA+AGG | 0.543250 | 3_1:+30513851 | None:intergenic |
| GCTTATACTTTCATCTTCTG+AGG | 0.545789 | 3_1:-30514623 | Msa0355690:CDS |
| TAGAATATCAATACTCCCAC+AGG | 0.547853 | 3_1:+30514648 | None:intergenic |
| TTAATGGTGGCAGCATCCTG+TGG | 0.552985 | 3_1:-30514664 | Msa0355690:CDS |
| TGCTCCTATTGTCATGGACA+TGG | 0.553647 | 3_1:-30513749 | Msa0355690:CDS |
| TTCACGATTTCGAGCTTATG+GGG | 0.556465 | 3_1:+30514421 | None:intergenic |
| ATACTGATCTGGATGTAGCC+AGG | 0.556939 | 3_1:+30513882 | None:intergenic |
| TGTTACATGAAGTCGGCACC+TGG | 0.564048 | 3_1:-30514738 | Msa0355690:CDS |
| AAAGGCTGTGCAAAAGGTGA+TGG | 0.567762 | 3_1:+30513673 | None:intergenic |
| CGGGTACCATTTCAGTGAGT+CGG | 0.574233 | 3_1:-30513573 | Msa0355690:CDS |
| TAATGGTGGCAGCATCCTGT+GGG | 0.581131 | 3_1:-30514663 | Msa0355690:CDS |
| TGCATCTGCTCCTATTGTCA+TGG | 0.581920 | 3_1:-30513755 | Msa0355690:CDS |
| AGCAGCACAGTGAAGAGCAG+TGG | 0.584568 | 3_1:+30514567 | None:intergenic |
| GGATGCTAATGGAAACCGTC+CGG | 0.590775 | 3_1:-30514473 | Msa0355690:CDS |
| GGGGTCTCCATCCTCTCCTG+TGG | 0.592440 | 3_1:-30514317 | Msa0355690:CDS |
| GATCTAATGGAAGCATGCGA+TGG | 0.592544 | 3_1:+30513781 | None:intergenic |
| CGACTCACTGAAATGGTACC+CGG | 0.592848 | 3_1:+30513574 | None:intergenic |
| GATATGTGTGAATATGCTCA+TGG | 0.598080 | 3_1:-30513916 | Msa0355690:CDS |
| GGAAGAACAATAACATCCAC+CGG | 0.599918 | 3_1:+30514454 | None:intergenic |
| TTCCGCTGTCTTGTGAAAAG+GGG | 0.600730 | 3_1:-30514336 | Msa0355690:CDS |
| CCATTTGCATATAGATACAA+AGG | 0.602439 | 3_1:+30513655 | None:intergenic |
| GCCTCGCTGTTACATGAAGT+CGG | 0.613028 | 3_1:-30514745 | Msa0355690:CDS |
| TCACTGAAATGGTACCCGGA+CGG | 0.621764 | 3_1:+30513578 | None:intergenic |
| TTCAGAACTAACAGCTGTGT+CGG | 0.628333 | 3_1:+30514282 | None:intergenic |
| CTTCACTGTGCTGCTTCGAG+TGG | 0.634753 | 3_1:-30514559 | Msa0355690:CDS |
| GCTAATTGAAGGATGTGCGG+TGG | 0.636952 | 3_1:-30514934 | None:intergenic |
| GGGTACTAGTTGTAACCGAA+AGG | 0.639928 | 3_1:-30513839 | Msa0355690:CDS |
| ACAAAACCAAATTGTTCTCG+AGG | 0.654585 | 3_1:-30514698 | Msa0355690:CDS |
| GAACAATAACATCCACCGGA+CGG | 0.659004 | 3_1:+30514458 | None:intergenic |
| TGCTAATGGAAACCGTCCGG+TGG | 0.659107 | 3_1:-30514470 | Msa0355690:CDS |
| TCGCACAAGCCTTTGCAAAG+AGG | 0.659587 | 3_1:-30513860 | Msa0355690:CDS |
| GGATGCTGCCACCATTAAAG+GGG | 0.660725 | 3_1:+30514669 | None:intergenic |
| AAACTTTGGAGCCACAGGAG+AGG | 0.663839 | 3_1:+30514306 | None:intergenic |
| GTTAACTCCTCGTCTAAGTG+GGG | 0.664476 | 3_1:-30513547 | Msa0355690:CDS |
| TGGTGCTGACATCTATTGTG+TGG | 0.667410 | 3_1:-30514494 | Msa0355690:CDS |
| GCTGCAACGAGCCTTTATCG+TGG | 0.672740 | 3_1:-30513724 | Msa0355690:CDS |
| AAATAGGAATTGCAGACGCG+GGG | 0.674949 | 3_1:-30513938 | Msa0355690:CDS |
| GGACAGAACCCCTTTAATGG+TGG | 0.675106 | 3_1:-30514677 | Msa0355690:CDS |
| AGAAATAGGAATTGCAGACG+CGG | 0.678930 | 3_1:-30513940 | Msa0355690:CDS |
| TGTGCTGCTGACCATCAAAG+AGG | 0.681128 | 3_1:+30513632 | None:intergenic |
| TCAGCTAATTGAAGGATGTG+CGG | 0.686760 | 3_1:-30514937 | None:intergenic |
| ATACATGCGAAATTCATCTG+TGG | 0.693580 | 3_1:+30514198 | None:intergenic |
| ATGAGATCCCCACTTAGACG+AGG | 0.708111 | 3_1:+30513540 | None:intergenic |
| GCCGACTTCATGTAACAGCG+AGG | 0.745868 | 3_1:+30514744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATGATTTTGAACAATTTA+AGG | - | chr3_1:30513551-30513570 | Msa0355690:CDS | 20.0% |
| !!! | ATTGGATATTTTTTCTTTTC+TGG | + | chr3_1:30514080-30514099 | None:intergenic | 20.0% |
| !!! | AATTCCTATTTCTAAAATCA+GGG | + | chr3_1:30514389-30514408 | None:intergenic | 20.0% |
| !!! | GAATGATTTTGAACAATTTA+AGG | - | chr3_1:30513551-30513570 | Msa0355690:CDS | 20.0% |
| !!! | ATTGGATATTTTTTCTTTTC+TGG | + | chr3_1:30514080-30514099 | None:intergenic | 20.0% |
| !!! | AATTCCTATTTCTAAAATCA+GGG | + | chr3_1:30514389-30514408 | None:intergenic | 20.0% |
| !!! | CAATTCCTATTTCTAAAATC+AGG | + | chr3_1:30514390-30514409 | None:intergenic | 25.0% |
| !!! | CAATTCCTATTTCTAAAATC+AGG | + | chr3_1:30514390-30514409 | None:intergenic | 25.0% |
| !!! | GTTTTAACTTCATCTGCTTT+AGG | - | chr3_1:30513444-30513463 | Msa0355690:CDS | 30.0% |
| !!! | TTTGGTTTTGTCCATTTTGA+CGG | + | chr3_1:30513629-30513648 | None:intergenic | 30.0% |
| ! | CTGGTGTAAATTTTTCTTGT+GGG | - | chr3_1:30513736-30513755 | Msa0355690:CDS | 30.0% |
| TTTCGTATATCAGGAATTGA+TGG | + | chr3_1:30514107-30514126 | None:intergenic | 30.0% | |
| !! | TATATGCTGTTTCGTATATC+AGG | + | chr3_1:30514116-30514135 | None:intergenic | 30.0% |
| AGATGAATTTCGCATGTATT+CGG | - | chr3_1:30514142-30514161 | Msa0355690:intron | 30.0% | |
| CCATTTGCATATAGATACAA+AGG | + | chr3_1:30514684-30514703 | None:intergenic | 30.0% | |
| CCTTTGTATCTATATGCAAA+TGG | - | chr3_1:30514681-30514700 | Msa0355690:CDS | 30.0% | |
| ACCAAAGTCATTTCCATTTA+CGG | + | chr3_1:30514841-30514860 | None:intergenic | 30.0% | |
| !!! | GTTTTAACTTCATCTGCTTT+AGG | - | chr3_1:30513444-30513463 | Msa0355690:CDS | 30.0% |
| !!! | TTTGGTTTTGTCCATTTTGA+CGG | + | chr3_1:30513629-30513648 | None:intergenic | 30.0% |
| ! | CTGGTGTAAATTTTTCTTGT+GGG | - | chr3_1:30513736-30513755 | Msa0355690:CDS | 30.0% |
| TTTCGTATATCAGGAATTGA+TGG | + | chr3_1:30514107-30514126 | None:intergenic | 30.0% | |
| !! | TATATGCTGTTTCGTATATC+AGG | + | chr3_1:30514116-30514135 | None:intergenic | 30.0% |
| AGATGAATTTCGCATGTATT+CGG | - | chr3_1:30514142-30514161 | Msa0355690:intron | 30.0% | |
| CCATTTGCATATAGATACAA+AGG | + | chr3_1:30514684-30514703 | None:intergenic | 30.0% | |
| CCTTTGTATCTATATGCAAA+TGG | - | chr3_1:30514681-30514700 | Msa0355690:CDS | 30.0% | |
| ACCAAAGTCATTTCCATTTA+CGG | + | chr3_1:30514841-30514860 | None:intergenic | 30.0% | |
| ! | TTAACTTCATCTGCTTTAGG+AGG | - | chr3_1:30513447-30513466 | Msa0355690:CDS | 35.0% |
| ACAAAACCAAATTGTTCTCG+AGG | - | chr3_1:30513638-30513657 | Msa0355690:CDS | 35.0% | |
| TAGAATATCAATACTCCCAC+AGG | + | chr3_1:30513691-30513710 | None:intergenic | 35.0% | |
| GCTTATACTTTCATCTTCTG+AGG | - | chr3_1:30513713-30513732 | Msa0355690:CDS | 35.0% | |
| ! | GCTGGTGTAAATTTTTCTTG+TGG | - | chr3_1:30513735-30513754 | Msa0355690:CDS | 35.0% |
| !! | GTAAAACTGCTTTTATCAGC+TGG | - | chr3_1:30513822-30513841 | Msa0355690:CDS | 35.0% |
| ATCTATTGTGTGGATGCTAA+TGG | - | chr3_1:30513852-30513871 | Msa0355690:CDS | 35.0% | |
| TTTCACGATTTCGAGCTTAT+GGG | + | chr3_1:30513919-30513938 | None:intergenic | 35.0% | |
| ! | TTTTCACGATTTCGAGCTTA+TGG | + | chr3_1:30513920-30513939 | None:intergenic | 35.0% |
| ! | TCAGGAATTGATGGATCAAT+TGG | + | chr3_1:30514098-30514117 | None:intergenic | 35.0% |
| ATACATGCGAAATTCATCTG+TGG | + | chr3_1:30514141-30514160 | None:intergenic | 35.0% | |
| !! | CTATTTCTAAAATCAGGGCA+TGG | + | chr3_1:30514384-30514403 | None:intergenic | 35.0% |
| !! | CATGCCCTGATTTTAGAAAT+AGG | - | chr3_1:30514382-30514401 | Msa0355690:CDS | 35.0% |
| GATATGTGTGAATATGCTCA+TGG | - | chr3_1:30514420-30514439 | Msa0355690:CDS | 35.0% | |
| !! | TTGATAGTGAACCACGATAA+AGG | + | chr3_1:30514626-30514645 | None:intergenic | 35.0% |
| TCCGTAAATGGAAATGACTT+TGG | - | chr3_1:30514837-30514856 | Msa0355690:CDS | 35.0% | |
| ! | AGATATACCTCTTTTCAGCA+TGG | - | chr3_1:30514870-30514889 | Msa0355690:CDS | 35.0% |
| ATTGTTTCCATGCTGAAAAG+AGG | + | chr3_1:30514880-30514899 | None:intergenic | 35.0% | |
| TTGAAGAGCCTGATATATCT+TGG | - | chr3_1:30514901-30514920 | Msa0355690:CDS | 35.0% | |
| TGAAGAGCCTGATATATCTT+GGG | - | chr3_1:30514902-30514921 | Msa0355690:CDS | 35.0% | |
| ! | TTAACTTCATCTGCTTTAGG+AGG | - | chr3_1:30513447-30513466 | Msa0355690:CDS | 35.0% |
| ACAAAACCAAATTGTTCTCG+AGG | - | chr3_1:30513638-30513657 | Msa0355690:CDS | 35.0% | |
| TAGAATATCAATACTCCCAC+AGG | + | chr3_1:30513691-30513710 | None:intergenic | 35.0% | |
| GCTTATACTTTCATCTTCTG+AGG | - | chr3_1:30513713-30513732 | Msa0355690:CDS | 35.0% | |
| ! | GCTGGTGTAAATTTTTCTTG+TGG | - | chr3_1:30513735-30513754 | Msa0355690:CDS | 35.0% |
| !! | GTAAAACTGCTTTTATCAGC+TGG | - | chr3_1:30513822-30513841 | Msa0355690:CDS | 35.0% |
| ATCTATTGTGTGGATGCTAA+TGG | - | chr3_1:30513852-30513871 | Msa0355690:CDS | 35.0% | |
| TTTCACGATTTCGAGCTTAT+GGG | + | chr3_1:30513919-30513938 | None:intergenic | 35.0% | |
| ! | TTTTCACGATTTCGAGCTTA+TGG | + | chr3_1:30513920-30513939 | None:intergenic | 35.0% |
| ! | TCAGGAATTGATGGATCAAT+TGG | + | chr3_1:30514098-30514117 | None:intergenic | 35.0% |
| ATACATGCGAAATTCATCTG+TGG | + | chr3_1:30514141-30514160 | None:intergenic | 35.0% | |
| !! | CTATTTCTAAAATCAGGGCA+TGG | + | chr3_1:30514384-30514403 | None:intergenic | 35.0% |
| !! | CATGCCCTGATTTTAGAAAT+AGG | - | chr3_1:30514382-30514401 | Msa0355690:CDS | 35.0% |
| GATATGTGTGAATATGCTCA+TGG | - | chr3_1:30514420-30514439 | Msa0355690:CDS | 35.0% | |
| !! | TTGATAGTGAACCACGATAA+AGG | + | chr3_1:30514626-30514645 | None:intergenic | 35.0% |
| TCCGTAAATGGAAATGACTT+TGG | - | chr3_1:30514837-30514856 | Msa0355690:CDS | 35.0% | |
| ! | AGATATACCTCTTTTCAGCA+TGG | - | chr3_1:30514870-30514889 | Msa0355690:CDS | 35.0% |
| ATTGTTTCCATGCTGAAAAG+AGG | + | chr3_1:30514880-30514899 | None:intergenic | 35.0% | |
| TTGAAGAGCCTGATATATCT+TGG | - | chr3_1:30514901-30514920 | Msa0355690:CDS | 35.0% | |
| TGAAGAGCCTGATATATCTT+GGG | - | chr3_1:30514902-30514921 | Msa0355690:CDS | 35.0% | |
| ! | AGAAGCATGTTCAAGTAAGC+TGG | + | chr3_1:30513529-30513548 | None:intergenic | 40.0% |
| TTCTGTCCTCGAGAACAATT+TGG | + | chr3_1:30513647-30513666 | None:intergenic | 40.0% | |
| !! | ATACTTTCATCTTCTGAGGC+TGG | - | chr3_1:30513717-30513736 | Msa0355690:CDS | 40.0% |
| GGAAGAACAATAACATCCAC+CGG | + | chr3_1:30513885-30513904 | None:intergenic | 40.0% | |
| TTCACGATTTCGAGCTTATG+GGG | + | chr3_1:30513918-30513937 | None:intergenic | 40.0% | |
| TTCAGAACTAACAGCTGTGT+CGG | + | chr3_1:30514057-30514076 | None:intergenic | 40.0% | |
| ATTTCGCATGTATTCGGTCA+AGG | - | chr3_1:30514148-30514167 | Msa0355690:intron | 40.0% | |
| TGTATGCACGATGACAAAGA+AGG | + | chr3_1:30514175-30514194 | None:intergenic | 40.0% | |
| ATCGTGCATACACTCATGAT+TGG | - | chr3_1:30514183-30514202 | Msa0355690:intron | 40.0% | |
| TGCATACACTCATGATTGGA+CGG | - | chr3_1:30514187-30514206 | Msa0355690:intron | 40.0% | |
| AGCTGTAGGTGAACTTTCTA+GGG | + | chr3_1:30514356-30514375 | None:intergenic | 40.0% | |
| AGAAATAGGAATTGCAGACG+CGG | - | chr3_1:30514396-30514415 | Msa0355690:CDS | 40.0% | |
| AACTAGTACCCTCTTTGCAA+AGG | + | chr3_1:30514488-30514507 | None:intergenic | 40.0% | |
| ! | GTGCAAAAAAGCACACCTTT+CGG | + | chr3_1:30514515-30514534 | None:intergenic | 40.0% |
| AGATACAAAGGCTGTGCAAA+AGG | + | chr3_1:30514672-30514691 | None:intergenic | 40.0% | |
| TATGCAAATGGCCTCTTTGA+TGG | - | chr3_1:30514693-30514712 | Msa0355690:CDS | 40.0% | |
| TGTTAACTCCTCGTCTAAGT+GGG | - | chr3_1:30514788-30514807 | Msa0355690:CDS | 40.0% | |
| CTCATACTGGTAAACCTGAT+TGG | - | chr3_1:30514814-30514833 | Msa0355690:CDS | 40.0% | |
| ! | AAACCTGATTGGTCCGTAAA+TGG | - | chr3_1:30514825-30514844 | Msa0355690:CDS | 40.0% |
| TTTCCATTTACGGACCAATC+AGG | + | chr3_1:30514831-30514850 | None:intergenic | 40.0% | |
| GATTGGACCCAAGATATATC+AGG | + | chr3_1:30514912-30514931 | None:intergenic | 40.0% | |
| ! | AGAAGCATGTTCAAGTAAGC+TGG | + | chr3_1:30513529-30513548 | None:intergenic | 40.0% |
| TTCTGTCCTCGAGAACAATT+TGG | + | chr3_1:30513647-30513666 | None:intergenic | 40.0% | |
| !! | ATACTTTCATCTTCTGAGGC+TGG | - | chr3_1:30513717-30513736 | Msa0355690:CDS | 40.0% |
| GGAAGAACAATAACATCCAC+CGG | + | chr3_1:30513885-30513904 | None:intergenic | 40.0% | |
| TTCACGATTTCGAGCTTATG+GGG | + | chr3_1:30513918-30513937 | None:intergenic | 40.0% | |
| TTCAGAACTAACAGCTGTGT+CGG | + | chr3_1:30514057-30514076 | None:intergenic | 40.0% | |
| ATTTCGCATGTATTCGGTCA+AGG | - | chr3_1:30514148-30514167 | Msa0355690:intron | 40.0% | |
| TGTATGCACGATGACAAAGA+AGG | + | chr3_1:30514175-30514194 | None:intergenic | 40.0% | |
| ATCGTGCATACACTCATGAT+TGG | - | chr3_1:30514183-30514202 | Msa0355690:intron | 40.0% | |
| TGCATACACTCATGATTGGA+CGG | - | chr3_1:30514187-30514206 | Msa0355690:intron | 40.0% | |
| AGCTGTAGGTGAACTTTCTA+GGG | + | chr3_1:30514356-30514375 | None:intergenic | 40.0% | |
| AGAAATAGGAATTGCAGACG+CGG | - | chr3_1:30514396-30514415 | Msa0355690:CDS | 40.0% | |
| AACTAGTACCCTCTTTGCAA+AGG | + | chr3_1:30514488-30514507 | None:intergenic | 40.0% | |
| ! | GTGCAAAAAAGCACACCTTT+CGG | + | chr3_1:30514515-30514534 | None:intergenic | 40.0% |
| AGATACAAAGGCTGTGCAAA+AGG | + | chr3_1:30514672-30514691 | None:intergenic | 40.0% | |
| TATGCAAATGGCCTCTTTGA+TGG | - | chr3_1:30514693-30514712 | Msa0355690:CDS | 40.0% | |
| TGTTAACTCCTCGTCTAAGT+GGG | - | chr3_1:30514788-30514807 | Msa0355690:CDS | 40.0% | |
| CTCATACTGGTAAACCTGAT+TGG | - | chr3_1:30514814-30514833 | Msa0355690:CDS | 40.0% | |
| ! | AAACCTGATTGGTCCGTAAA+TGG | - | chr3_1:30514825-30514844 | Msa0355690:CDS | 40.0% |
| TTTCCATTTACGGACCAATC+AGG | + | chr3_1:30514831-30514850 | None:intergenic | 40.0% | |
| GATTGGACCCAAGATATATC+AGG | + | chr3_1:30514912-30514931 | None:intergenic | 40.0% | |
| AGGATGCTGCCACCATTAAA+GGG | + | chr3_1:30513671-30513690 | None:intergenic | 45.0% | |
| !! | TGGTGCTGACATCTATTGTG+TGG | - | chr3_1:30513842-30513861 | Msa0355690:CDS | 45.0% |
| GAACAATAACATCCACCGGA+CGG | + | chr3_1:30513881-30513900 | None:intergenic | 45.0% | |
| AGCTTATGGGGAACGACAAT+TGG | + | chr3_1:30513906-30513925 | None:intergenic | 45.0% | |
| ! | GCTGATGAGTCTGTTGATGA+TGG | - | chr3_1:30513972-30513991 | Msa0355690:intron | 45.0% |
| CTTCCGCTGTCTTGTGAAAA+GGG | - | chr3_1:30513999-30514018 | Msa0355690:intron | 45.0% | |
| TTCCGCTGTCTTGTGAAAAG+GGG | - | chr3_1:30514000-30514019 | Msa0355690:intron | 45.0% | |
| ! | ACAGCTGTGTCGGTAAACTT+TGG | + | chr3_1:30514047-30514066 | None:intergenic | 45.0% |
| CAGCTGTAGGTGAACTTTCT+AGG | + | chr3_1:30514357-30514376 | None:intergenic | 45.0% | |
| GAAATAGGAATTGCAGACGC+GGG | - | chr3_1:30514397-30514416 | Msa0355690:CDS | 45.0% | |
| AAATAGGAATTGCAGACGCG+GGG | - | chr3_1:30514398-30514417 | Msa0355690:CDS | 45.0% | |
| ATACTGATCTGGATGTAGCC+AGG | + | chr3_1:30514457-30514476 | None:intergenic | 45.0% | |
| GGGTACTAGTTGTAACCGAA+AGG | - | chr3_1:30514497-30514516 | Msa0355690:CDS | 45.0% | |
| ! | GATCTAATGGAAGCATGCGA+TGG | + | chr3_1:30514558-30514577 | None:intergenic | 45.0% |
| AGCAGATGCAGCTGATCTAA+TGG | + | chr3_1:30514571-30514590 | None:intergenic | 45.0% | |
| TGCATCTGCTCCTATTGTCA+TGG | - | chr3_1:30514581-30514600 | Msa0355690:CDS | 45.0% | |
| TGCTCCTATTGTCATGGACA+TGG | - | chr3_1:30514587-30514606 | Msa0355690:CDS | 45.0% | |
| AAAGGCTGTGCAAAAGGTGA+TGG | + | chr3_1:30514666-30514685 | None:intergenic | 45.0% | |
| ! | AACAGACCGACTCACTGAAA+TGG | + | chr3_1:30514772-30514791 | None:intergenic | 45.0% |
| CTGTTAACTCCTCGTCTAAG+TGG | - | chr3_1:30514787-30514806 | Msa0355690:CDS | 45.0% | |
| GTTAACTCCTCGTCTAAGTG+GGG | - | chr3_1:30514789-30514808 | Msa0355690:CDS | 45.0% | |
| TCTAAGTGGGGATCTCATAC+TGG | - | chr3_1:30514801-30514820 | Msa0355690:CDS | 45.0% | |
| AGGATGCTGCCACCATTAAA+GGG | + | chr3_1:30513671-30513690 | None:intergenic | 45.0% | |
| !! | TGGTGCTGACATCTATTGTG+TGG | - | chr3_1:30513842-30513861 | Msa0355690:CDS | 45.0% |
| GAACAATAACATCCACCGGA+CGG | + | chr3_1:30513881-30513900 | None:intergenic | 45.0% | |
| AGCTTATGGGGAACGACAAT+TGG | + | chr3_1:30513906-30513925 | None:intergenic | 45.0% | |
| ! | GCTGATGAGTCTGTTGATGA+TGG | - | chr3_1:30513972-30513991 | Msa0355690:intron | 45.0% |
| CTTCCGCTGTCTTGTGAAAA+GGG | - | chr3_1:30513999-30514018 | Msa0355690:intron | 45.0% | |
| TTCCGCTGTCTTGTGAAAAG+GGG | - | chr3_1:30514000-30514019 | Msa0355690:intron | 45.0% | |
| ! | ACAGCTGTGTCGGTAAACTT+TGG | + | chr3_1:30514047-30514066 | None:intergenic | 45.0% |
| CAGCTGTAGGTGAACTTTCT+AGG | + | chr3_1:30514357-30514376 | None:intergenic | 45.0% | |
| GAAATAGGAATTGCAGACGC+GGG | - | chr3_1:30514397-30514416 | Msa0355690:CDS | 45.0% | |
| AAATAGGAATTGCAGACGCG+GGG | - | chr3_1:30514398-30514417 | Msa0355690:CDS | 45.0% | |
| ATACTGATCTGGATGTAGCC+AGG | + | chr3_1:30514457-30514476 | None:intergenic | 45.0% | |
| GGGTACTAGTTGTAACCGAA+AGG | - | chr3_1:30514497-30514516 | Msa0355690:CDS | 45.0% | |
| ! | GATCTAATGGAAGCATGCGA+TGG | + | chr3_1:30514558-30514577 | None:intergenic | 45.0% |
| AGCAGATGCAGCTGATCTAA+TGG | + | chr3_1:30514571-30514590 | None:intergenic | 45.0% | |
| TGCATCTGCTCCTATTGTCA+TGG | - | chr3_1:30514581-30514600 | Msa0355690:CDS | 45.0% | |
| TGCTCCTATTGTCATGGACA+TGG | - | chr3_1:30514587-30514606 | Msa0355690:CDS | 45.0% | |
| AAAGGCTGTGCAAAAGGTGA+TGG | + | chr3_1:30514666-30514685 | None:intergenic | 45.0% | |
| ! | AACAGACCGACTCACTGAAA+TGG | + | chr3_1:30514772-30514791 | None:intergenic | 45.0% |
| CTGTTAACTCCTCGTCTAAG+TGG | - | chr3_1:30514787-30514806 | Msa0355690:CDS | 45.0% | |
| GTTAACTCCTCGTCTAAGTG+GGG | - | chr3_1:30514789-30514808 | Msa0355690:CDS | 45.0% | |
| TCTAAGTGGGGATCTCATAC+TGG | - | chr3_1:30514801-30514820 | Msa0355690:CDS | 45.0% | |
| GCCTCGCTGTTACATGAAGT+CGG | - | chr3_1:30513591-30513610 | Msa0355690:CDS | 50.0% | |
| TGTTACATGAAGTCGGCACC+TGG | - | chr3_1:30513598-30513617 | Msa0355690:CDS | 50.0% | |
| ACCTGGTGTGTCCGTCAAAA+TGG | - | chr3_1:30513615-30513634 | Msa0355690:CDS | 50.0% | |
| !! | TCCATTTTGACGGACACACC+AGG | + | chr3_1:30513619-30513638 | None:intergenic | 50.0% |
| CGAGGACAGAACCCCTTTAA+TGG | - | chr3_1:30513656-30513675 | Msa0355690:CDS | 50.0% | |
| GGACAGAACCCCTTTAATGG+TGG | - | chr3_1:30513659-30513678 | Msa0355690:CDS | 50.0% | |
| GGATGCTGCCACCATTAAAG+GGG | + | chr3_1:30513670-30513689 | None:intergenic | 50.0% | |
| CAGGATGCTGCCACCATTAA+AGG | + | chr3_1:30513672-30513691 | None:intergenic | 50.0% | |
| TTAATGGTGGCAGCATCCTG+TGG | - | chr3_1:30513672-30513691 | Msa0355690:CDS | 50.0% | |
| TAATGGTGGCAGCATCCTGT+GGG | - | chr3_1:30513673-30513692 | Msa0355690:CDS | 50.0% | |
| GGATGCTAATGGAAACCGTC+CGG | - | chr3_1:30513863-30513882 | Msa0355690:CDS | 50.0% | |
| GCTTCCGCTGTCTTGTGAAA+AGG | - | chr3_1:30513998-30514017 | Msa0355690:intron | 50.0% | |
| ! | GACCCCTTTTCACAAGACAG+CGG | + | chr3_1:30514005-30514024 | None:intergenic | 50.0% |
| !! | AAACTTTGGAGCCACAGGAG+AGG | + | chr3_1:30514033-30514052 | None:intergenic | 50.0% |
| !! | TCGGTAAACTTTGGAGCCAC+AGG | + | chr3_1:30514038-30514057 | None:intergenic | 50.0% |
| CTCCTTCGTGCATTCTCTTG+AGG | + | chr3_1:30514330-30514349 | None:intergenic | 50.0% | |
| ! | CTCATGGAGTATTCGAGACC+TGG | - | chr3_1:30514436-30514455 | Msa0355690:CDS | 50.0% |
| AGGCTTGTGCGATACTGATC+TGG | + | chr3_1:30514468-30514487 | None:intergenic | 50.0% | |
| TCGCACAAGCCTTTGCAAAG+AGG | - | chr3_1:30514476-30514495 | Msa0355690:CDS | 50.0% | |
| CGCACAAGCCTTTGCAAAGA+GGG | - | chr3_1:30514477-30514496 | Msa0355690:CDS | 50.0% | |
| GCAGCCATGTCCATGACAAT+AGG | + | chr3_1:30514594-30514613 | None:intergenic | 50.0% | |
| ! | TGTGCTGCTGACCATCAAAG+AGG | + | chr3_1:30514707-30514726 | None:intergenic | 50.0% |
| TCACTGAAATGGTACCCGGA+CGG | + | chr3_1:30514761-30514780 | None:intergenic | 50.0% | |
| CGACTCACTGAAATGGTACC+CGG | + | chr3_1:30514765-30514784 | None:intergenic | 50.0% | |
| CGGGTACCATTTCAGTGAGT+CGG | - | chr3_1:30514763-30514782 | Msa0355690:CDS | 50.0% | |
| ATGAGATCCCCACTTAGACG+AGG | + | chr3_1:30514799-30514818 | None:intergenic | 50.0% | |
| GCCTCGCTGTTACATGAAGT+CGG | - | chr3_1:30513591-30513610 | Msa0355690:CDS | 50.0% | |
| TGTTACATGAAGTCGGCACC+TGG | - | chr3_1:30513598-30513617 | Msa0355690:CDS | 50.0% | |
| ACCTGGTGTGTCCGTCAAAA+TGG | - | chr3_1:30513615-30513634 | Msa0355690:CDS | 50.0% | |
| !! | TCCATTTTGACGGACACACC+AGG | + | chr3_1:30513619-30513638 | None:intergenic | 50.0% |
| CGAGGACAGAACCCCTTTAA+TGG | - | chr3_1:30513656-30513675 | Msa0355690:CDS | 50.0% | |
| GGACAGAACCCCTTTAATGG+TGG | - | chr3_1:30513659-30513678 | Msa0355690:CDS | 50.0% | |
| GGATGCTGCCACCATTAAAG+GGG | + | chr3_1:30513670-30513689 | None:intergenic | 50.0% | |
| CAGGATGCTGCCACCATTAA+AGG | + | chr3_1:30513672-30513691 | None:intergenic | 50.0% | |
| TTAATGGTGGCAGCATCCTG+TGG | - | chr3_1:30513672-30513691 | Msa0355690:CDS | 50.0% | |
| TAATGGTGGCAGCATCCTGT+GGG | - | chr3_1:30513673-30513692 | Msa0355690:CDS | 50.0% | |
| GGATGCTAATGGAAACCGTC+CGG | - | chr3_1:30513863-30513882 | Msa0355690:CDS | 50.0% | |
| GCTTCCGCTGTCTTGTGAAA+AGG | - | chr3_1:30513998-30514017 | Msa0355690:intron | 50.0% | |
| ! | GACCCCTTTTCACAAGACAG+CGG | + | chr3_1:30514005-30514024 | None:intergenic | 50.0% |
| !! | AAACTTTGGAGCCACAGGAG+AGG | + | chr3_1:30514033-30514052 | None:intergenic | 50.0% |
| !! | TCGGTAAACTTTGGAGCCAC+AGG | + | chr3_1:30514038-30514057 | None:intergenic | 50.0% |
| CTCCTTCGTGCATTCTCTTG+AGG | + | chr3_1:30514330-30514349 | None:intergenic | 50.0% | |
| ! | CTCATGGAGTATTCGAGACC+TGG | - | chr3_1:30514436-30514455 | Msa0355690:CDS | 50.0% |
| AGGCTTGTGCGATACTGATC+TGG | + | chr3_1:30514468-30514487 | None:intergenic | 50.0% | |
| TCGCACAAGCCTTTGCAAAG+AGG | - | chr3_1:30514476-30514495 | Msa0355690:CDS | 50.0% | |
| CGCACAAGCCTTTGCAAAGA+GGG | - | chr3_1:30514477-30514496 | Msa0355690:CDS | 50.0% | |
| GCAGCCATGTCCATGACAAT+AGG | + | chr3_1:30514594-30514613 | None:intergenic | 50.0% | |
| ! | TGTGCTGCTGACCATCAAAG+AGG | + | chr3_1:30514707-30514726 | None:intergenic | 50.0% |
| TCACTGAAATGGTACCCGGA+CGG | + | chr3_1:30514761-30514780 | None:intergenic | 50.0% | |
| CGACTCACTGAAATGGTACC+CGG | + | chr3_1:30514765-30514784 | None:intergenic | 50.0% | |
| CGGGTACCATTTCAGTGAGT+CGG | - | chr3_1:30514763-30514782 | Msa0355690:CDS | 50.0% | |
| ATGAGATCCCCACTTAGACG+AGG | + | chr3_1:30514799-30514818 | None:intergenic | 50.0% | |
| ! | GCCGACTTCATGTAACAGCG+AGG | + | chr3_1:30513595-30513614 | None:intergenic | 55.0% |
| AGCAGCACAGTGAAGAGCAG+TGG | + | chr3_1:30513772-30513791 | None:intergenic | 55.0% | |
| !! | CTTCACTGTGCTGCTTCGAG+TGG | - | chr3_1:30513777-30513796 | Msa0355690:CDS | 55.0% |
| !! | CTGTGCTGCTTCGAGTGGTA+CGG | - | chr3_1:30513782-30513801 | Msa0355690:CDS | 55.0% |
| TGCTAATGGAAACCGTCCGG+TGG | - | chr3_1:30513866-30513885 | Msa0355690:CDS | 55.0% | |
| ! | TTTGGAGCCACAGGAGAGGA+TGG | + | chr3_1:30514029-30514048 | None:intergenic | 55.0% |
| GCTGCAACGAGCCTTTATCG+TGG | - | chr3_1:30514612-30514631 | Msa0355690:CDS | 55.0% | |
| ACTGAAATGGTACCCGGACG+GGG | + | chr3_1:30514759-30514778 | None:intergenic | 55.0% | |
| CACTGAAATGGTACCCGGAC+GGG | + | chr3_1:30514760-30514779 | None:intergenic | 55.0% | |
| ! | GCCGACTTCATGTAACAGCG+AGG | + | chr3_1:30513595-30513614 | None:intergenic | 55.0% |
| AGCAGCACAGTGAAGAGCAG+TGG | + | chr3_1:30513772-30513791 | None:intergenic | 55.0% | |
| !! | CTTCACTGTGCTGCTTCGAG+TGG | - | chr3_1:30513777-30513796 | Msa0355690:CDS | 55.0% |
| !! | CTGTGCTGCTTCGAGTGGTA+CGG | - | chr3_1:30513782-30513801 | Msa0355690:CDS | 55.0% |
| TGCTAATGGAAACCGTCCGG+TGG | - | chr3_1:30513866-30513885 | Msa0355690:CDS | 55.0% | |
| ! | TTTGGAGCCACAGGAGAGGA+TGG | + | chr3_1:30514029-30514048 | None:intergenic | 55.0% |
| GCTGCAACGAGCCTTTATCG+TGG | - | chr3_1:30514612-30514631 | Msa0355690:CDS | 55.0% | |
| ACTGAAATGGTACCCGGACG+GGG | + | chr3_1:30514759-30514778 | None:intergenic | 55.0% | |
| CACTGAAATGGTACCCGGAC+GGG | + | chr3_1:30514760-30514779 | None:intergenic | 55.0% | |
| AGGGCATGGCACACAGCTGT+AGG | + | chr3_1:30514370-30514389 | None:intergenic | 60.0% | |
| ! | CTGTTTCTCACAGCCCCGTC+CGG | - | chr3_1:30514743-30514762 | Msa0355690:CDS | 60.0% |
| TGTTTCTCACAGCCCCGTCC+GGG | - | chr3_1:30514744-30514763 | Msa0355690:CDS | 60.0% | |
| AGGGCATGGCACACAGCTGT+AGG | + | chr3_1:30514370-30514389 | None:intergenic | 60.0% | |
| ! | CTGTTTCTCACAGCCCCGTC+CGG | - | chr3_1:30514743-30514762 | Msa0355690:CDS | 60.0% |
| TGTTTCTCACAGCCCCGTCC+GGG | - | chr3_1:30514744-30514763 | Msa0355690:CDS | 60.0% | |
| GGGGTCTCCATCCTCTCCTG+TGG | - | chr3_1:30514019-30514038 | Msa0355690:intron | 65.0% | |
| GGGGTCTCCATCCTCTCCTG+TGG | - | chr3_1:30514019-30514038 | Msa0355690:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 30513414 | 30514944 | 30513414 | ID=Msa0355690;Name=Msa0355690 |
| chr3_1 | mRNA | 30513414 | 30514944 | 30513414 | ID=Msa0355690-mRNA-1;Parent=Msa0355690;Name=Msa0355690-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|429 |
| chr3_1 | exon | 30514202 | 30514944 | 30514202 | ID=Msa0355690-mRNA-1:exon:6299;Parent=Msa0355690-mRNA-1 |
| chr3_1 | exon | 30513414 | 30513960 | 30513414 | ID=Msa0355690-mRNA-1:exon:6298;Parent=Msa0355690-mRNA-1 |
| chr3_1 | CDS | 30514202 | 30514944 | 30514202 | ID=Msa0355690-mRNA-1:cds;Parent=Msa0355690-mRNA-1 |
| chr3_1 | CDS | 30513414 | 30513960 | 30513414 | ID=Msa0355690-mRNA-1:cds;Parent=Msa0355690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
