AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0357120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0357120 MtrunA17_Chr3g0093811 85.660 265 18 3 44 299 14 267 6.30e-153 428
Msa0357120 MtrunA17_Chr6g0452271 37.464 347 158 12 1 299 1 336 2.46e-57 187
Msa0357120 MtrunA17_Chr3g0103281 60.584 137 50 4 1 135 1 135 2.38e-48 164
Msa0357120 MtrunA17_Chr7g0217741 54.264 129 57 2 1 128 1 128 4.24e-41 144
Msa0357120 MtrunA17_Chr2g0281071 48.062 129 66 1 1 128 1 129 8.29e-41 144
Msa0357120 MtrunA17_Chr4g0048511 47.761 134 69 1 1 133 1 134 3.10e-40 143
Msa0357120 MtrunA17_Chr1g0193371 50.735 136 65 2 1 135 1 135 2.82e-39 141
Msa0357120 MtrunA17_Chr4g0042671 52.713 129 59 2 1 128 1 128 5.22e-39 141
Msa0357120 MtrunA17_Chr1g0193801 51.128 133 63 2 1 132 1 132 8.54e-39 140
Msa0357120 MtrunA17_Chr1g0211161 50.000 130 64 1 1 129 1 130 8.61e-39 136
Msa0357120 MtrunA17_Chr7g0270891 50.376 133 64 2 1 132 1 132 1.52e-38 139
Msa0357120 MtrunA17_Chr4g0057031 50.000 132 64 2 1 131 1 131 1.79e-38 136
Msa0357120 MtrunA17_Chr6g0453471 51.163 129 61 2 1 128 1 128 2.76e-38 138
Msa0357120 MtrunA17_Chr3g0117091 50.806 124 60 1 7 129 6 129 2.69e-37 135
Msa0357120 MtrunA17_Chr5g0410961 48.837 129 64 2 1 128 1 128 7.83e-37 134
Msa0357120 MtrunA17_Chr3g0115821 47.407 135 69 2 1 134 1 134 1.07e-36 134
Msa0357120 MtrunA17_Chr4g0037141 45.865 133 70 2 1 132 1 132 1.71e-36 132
Msa0357120 MtrunA17_Chr4g0058631 49.242 132 65 2 1 131 1 131 2.80e-36 133
Msa0357120 MtrunA17_Chr4g0039971 48.062 129 66 1 1 128 1 129 3.08e-36 132
Msa0357120 MtrunA17_Chr5g0434571 48.092 131 66 2 1 130 37 166 6.44e-36 132
Msa0357120 MtrunA17_Chr5g0395281 35.776 232 119 6 1 225 1 209 6.61e-36 130
Msa0357120 MtrunA17_Chr7g0228891 50.000 132 64 2 1 131 1 131 8.60e-36 129
Msa0357120 MtrunA17_Chr3g0110351 47.794 136 69 2 1 135 1 135 9.28e-36 130
Msa0357120 MtrunA17_Chr2g0323411 45.736 129 68 2 1 128 1 128 1.32e-35 130
Msa0357120 MtrunA17_Chr8g0385321 46.617 133 69 2 1 132 1 132 3.71e-35 129
Msa0357120 MtrunA17_Chr5g0435101 42.581 155 83 3 2 155 1 150 4.28e-35 126
Msa0357120 MtrunA17_Chr4g0028311 53.077 130 56 5 1 127 1 128 1.06e-34 128
Msa0357120 MtrunA17_Chr3g0131121 45.802 131 69 2 1 130 1 130 1.66e-34 127
Msa0357120 MtrunA17_Chr8g0349261 46.970 132 68 2 1 130 1 132 2.23e-34 126
Msa0357120 MtrunA17_Chr5g0417821 47.899 119 61 1 13 130 7 125 4.10e-34 125
Msa0357120 MtrunA17_Chr4g0044421 46.032 126 67 1 2 126 1 126 5.54e-34 122
Msa0357120 MtrunA17_Chr2g0309911 47.200 125 65 1 7 130 5 129 6.66e-34 125
Msa0357120 MtrunA17_Chr7g0271241 51.515 132 62 2 1 131 1 131 9.19e-34 127
Msa0357120 MtrunA17_Chr3g0135311 53.390 118 52 3 1 116 1 117 1.65e-33 125
Msa0357120 MtrunA17_Chr1g0151941 55.462 119 48 5 1 116 1 117 1.98e-33 123
Msa0357120 MtrunA17_Chr5g0400821 52.542 118 53 3 1 116 1 117 2.62e-33 124
Msa0357120 MtrunA17_Chr4g0022901 47.414 116 60 1 1 115 1 116 3.51e-33 122
Msa0357120 MtrunA17_Chr4g0022931 45.902 122 65 1 1 121 1 122 4.28e-33 122
Msa0357120 MtrunA17_Chr3g0121241 45.968 124 66 1 7 129 36 159 9.76e-33 122
Msa0357120 MtrunA17_Chr1g0152011 51.695 118 54 3 1 116 1 117 9.87e-33 123
Msa0357120 MtrunA17_Chr1g0187761 50.420 119 57 2 1 118 1 118 1.76e-32 120
Msa0357120 MtrunA17_Chr1g0167691 40.491 163 86 4 1 153 1 162 6.90e-32 119
Msa0357120 MtrunA17_Chr7g0264641 52.066 121 55 3 1 119 1 120 1.14e-31 119
Msa0357120 MtrunA17_Chr4g0068061 48.718 117 58 2 1 116 1 116 1.45e-31 120
Msa0357120 MtrunA17_Chr4g0022911 46.552 116 61 1 1 115 1 116 1.47e-31 119
Msa0357120 MtrunA17_Chr1g0167661 47.009 117 60 2 1 116 1 116 1.85e-31 117
Msa0357120 MtrunA17_Chr1g0203411 47.059 119 61 2 1 118 1 118 2.45e-31 118
Msa0357120 MtrunA17_Chr8g0342541 45.390 141 74 3 1 140 1 139 1.82e-30 117
Msa0357120 MtrunA17_Chr4g0070641 45.833 120 63 2 1 119 1 119 2.32e-30 112
Msa0357120 MtrunA17_Chr7g0247131 53.846 91 42 0 44 134 10 100 2.54e-30 115
Msa0357120 MtrunA17_Chr7g0275911 47.009 117 60 2 1 116 1 116 4.16e-30 114
Msa0357120 MtrunA17_Chr4g0070611 45.833 120 63 2 1 119 1 119 5.72e-30 115
Msa0357120 MtrunA17_Chr8g0342521 46.774 124 64 2 1 123 1 123 1.11e-29 115
Msa0357120 MtrunA17_Chr2g0323351 43.590 117 64 2 1 116 1 116 1.22e-29 113
Msa0357120 MtrunA17_Chr8g0387421 46.429 112 59 1 6 116 5 116 1.59e-29 114
Msa0357120 MtrunA17_Chr3g0092401 48.333 120 60 2 1 119 2 120 2.20e-29 114
Msa0357120 MtrunA17_Chr4g0054391 50.450 111 52 3 1 109 1 110 2.84e-29 113
Msa0357120 MtrunA17_Chr7g0217221 48.780 123 59 3 1 120 1 122 3.37e-29 112
Msa0357120 MtrunA17_Chr2g0330041 44.361 133 72 2 1 132 1 132 3.83e-29 114
Msa0357120 MtrunA17_Chr8g0346561 45.378 119 63 2 1 118 1 118 4.00e-29 112
Msa0357120 MtrunA17_Chr2g0327351 50.000 112 53 3 1 110 1 111 4.23e-29 113
Msa0357120 MtrunA17_Chr7g0254411 46.825 126 63 3 1 123 1 125 1.50e-28 112
Msa0357120 MtrunA17_Chr7g0261281 45.378 119 63 2 1 118 1 118 1.67e-28 110
Msa0357120 MtrunA17_Chr4g0060721 47.899 119 60 2 1 118 2 119 3.09e-28 111
Msa0357120 MtrunA17_Chr4g0022891 44.737 114 61 2 1 113 1 113 5.63e-28 108
Msa0357120 MtrunA17_Chr1g0203441 44.444 117 63 2 14 129 14 129 6.51e-28 108
Msa0357120 MtrunA17_Chr4g0072751 50.000 112 53 3 1 110 1 111 7.10e-28 110
Msa0357120 MtrunA17_Chr7g0274581 45.378 119 63 2 1 118 1 118 7.56e-28 107
Msa0357120 MtrunA17_Chr6g0487491 48.800 125 53 4 1 115 1 124 1.36e-27 107
Msa0357120 MtrunA17_Chr5g0397231 46.226 106 56 1 6 110 5 110 1.42e-27 109
Msa0357120 MtrunA17_Chr8g0342481 40.000 190 107 7 1 188 1 185 3.34e-27 109
Msa0357120 MtrunA17_Chr6g0453211 48.649 111 55 2 1 110 1 110 4.12e-27 107
Msa0357120 MtrunA17_Chr3g0080861 44.348 115 63 1 2 115 26 140 4.25e-27 110
Msa0357120 MtrunA17_Chr1g0194951 46.154 117 61 2 1 116 1 116 4.70e-27 108
Msa0357120 MtrunA17_Chr2g0311221 47.706 109 55 2 3 110 5 112 9.14e-27 107
Msa0357120 MtrunA17_Chr1g0194301 44.828 116 63 1 8 122 28 143 2.68e-26 104
Msa0357120 MtrunA17_Chr6g0470971 47.170 106 55 1 11 115 12 117 3.77e-26 104
Msa0357120 MtrunA17_Chr3g0099131 44.860 107 58 1 13 118 41 147 4.20e-26 107
Msa0357120 MtrunA17_Chr4g0055981 40.909 132 75 2 13 143 55 184 6.79e-26 102
Msa0357120 MtrunA17_Chr1g0209661 32.569 218 122 6 13 224 27 225 8.01e-26 104
Msa0357120 MtrunA17_Chr1g0168661 48.571 105 53 1 12 115 20 124 8.21e-26 103
Msa0357120 MtrunA17_Chr8g0354661 43.519 108 60 1 9 115 33 140 1.31e-25 106
Msa0357120 MtrunA17_Chr2g0328771 41.667 108 62 1 13 119 20 127 2.54e-25 102
Msa0357120 MtrunA17_Chr4g0032401 39.344 122 73 1 2 122 6 127 9.66e-25 101
Msa0357120 MtrunA17_Chr7g0228231 42.991 107 60 1 13 118 14 120 1.36e-24 98.6
Msa0357120 MtrunA17_Chr1g0192411 43.636 110 60 2 13 121 12 120 1.97e-24 102
Msa0357120 MtrunA17_Chr1g0186061 45.631 103 55 1 14 115 21 123 2.49e-24 99.0
Msa0357120 MtrunA17_Chr6g0450101 42.593 108 61 1 13 119 14 121 3.10e-24 97.4
Msa0357120 MtrunA17_Chr4g0022881 40.870 115 66 2 1 114 1 114 3.37e-24 98.2
Msa0357120 MtrunA17_Chr1g0194291 38.168 131 79 2 4 133 12 141 4.61e-24 98.6
Msa0357120 MtrunA17_Chr8g0343831 42.017 119 63 2 1 118 1 114 5.80e-24 97.8
Msa0357120 MtrunA17_Chr3g0088461 42.991 107 60 1 11 116 20 126 7.22e-24 99.4
Msa0357120 MtrunA17_Chr5g0434841 41.379 116 67 1 2 116 9 124 8.41e-24 99.0
Msa0357120 MtrunA17_Chr5g0434831 42.727 110 62 1 8 116 2 111 9.84e-24 95.9
Msa0357120 MtrunA17_Chr5g0434911 41.284 109 63 1 9 116 17 125 2.41e-23 96.7
Msa0357120 MtrunA17_Chr1g0154031 44.231 104 57 1 13 115 76 179 7.19e-23 97.4
Msa0357120 MtrunA17_Chr8g0360111 42.453 106 60 1 8 112 20 125 8.75e-23 95.1
Msa0357120 MtrunA17_Chr1g0180391 42.857 105 59 1 13 116 19 123 9.11e-23 94.4
Msa0357120 MtrunA17_Chr5g0434931 40.952 105 61 1 13 116 35 139 1.08e-22 95.1
Msa0357120 MtrunA17_Chr5g0441131 33.333 162 72 5 14 140 10 170 4.76e-22 91.3
Msa0357120 MtrunA17_Chr7g0269831 44.444 117 63 2 1 116 1 116 7.48e-22 94.0
Msa0357120 MtrunA17_Chr2g0327821 43.269 104 58 1 13 115 6 109 7.52e-22 91.7
Msa0357120 MtrunA17_Chr4g0030881 41.739 115 59 2 12 118 6 120 9.54e-22 92.0
Msa0357120 MtrunA17_Chr3g0133601 39.062 128 67 3 15 141 37 154 2.15e-21 90.5
Msa0357120 MtrunA17_Chr5g0440781 38.393 112 66 3 14 123 13 123 3.38e-21 89.0
Msa0357120 MtrunA17_Chr5g0401731 37.681 138 77 3 10 139 3 139 3.87e-21 91.7
Msa0357120 MtrunA17_Chr7g0240821 44.118 102 57 0 21 122 10 111 3.96e-21 89.7
Msa0357120 MtrunA17_Chr2g0322521 43.269 104 58 1 13 115 29 132 7.63e-21 91.7
Msa0357120 MtrunA17_Chr7g0228991 40.952 105 61 1 13 116 29 133 8.88e-21 89.7
Msa0357120 MtrunA17_Chr4g0068921 41.270 126 72 2 5 129 16 140 1.19e-20 87.4
Msa0357120 MtrunA17_Chr7g0220341 41.121 107 60 2 13 116 25 131 1.58e-20 89.0
Msa0357120 MtrunA17_Chr2g0293911 41.525 118 67 2 13 129 24 140 1.89e-20 89.7
Msa0357120 MtrunA17_Chr5g0441141 38.393 112 66 3 14 123 13 123 1.95e-20 89.0
Msa0357120 MtrunA17_Chr5g0440761 38.393 112 66 3 14 123 13 123 2.02e-20 88.6
Msa0357120 MtrunA17_Chr4g0008551 42.636 129 63 7 15 141 38 157 4.96e-20 89.0
Msa0357120 MtrunA17_Chr6g0454921 41.346 104 60 1 21 124 22 124 3.26e-19 84.0
Msa0357120 MtrunA17_Chr7g0229101 54.286 70 32 0 44 113 4 73 3.80e-19 84.0
Msa0357120 MtrunA17_Chr8g0334881 38.532 109 64 3 13 119 10 117 1.65e-18 84.3
Msa0357120 MtrunA17_Chr7g0229131 49.315 73 37 0 44 116 4 76 5.23e-18 79.7
Msa0357120 MtrunA17_Chr4g0013361 40.385 104 60 2 13 114 10 113 5.72e-18 82.4
Msa0357120 MtrunA17_Chr5g0417621 39.286 112 64 4 9 118 128 237 7.36e-18 83.2
Msa0357120 MtrunA17_Chr6g0480581 35.294 136 78 5 12 145 1 128 9.47e-18 80.9
Msa0357120 MtrunA17_Chr5g0434901 53.030 66 31 0 48 113 9 74 9.66e-18 77.4
Msa0357120 MtrunA17_Chr5g0395231 45.714 105 40 4 78 172 5 102 1.25e-17 80.5
Msa0357120 MtrunA17_Chr4g0042501 38.532 109 63 4 12 118 102 208 2.37e-17 81.6
Msa0357120 MtrunA17_Chr5g0429661 33.333 117 76 2 3 118 110 225 2.49e-17 81.3
Msa0357120 MtrunA17_Chr4g0053431 47.143 70 37 0 48 117 38 107 2.89e-17 80.1
Msa0357120 MtrunA17_Chr3g0125801 41.228 114 63 4 4 115 5 116 7.69e-17 79.0
Msa0357120 MtrunA17_Chr4g0058991 31.897 116 79 0 3 118 197 312 1.50e-16 79.7
Msa0357120 MtrunA17_Chr2g0323321 38.710 93 54 3 1 92 1 91 3.09e-16 73.2
Msa0357120 MtrunA17_Chr5g0437321 36.364 110 68 2 4 112 8 116 1.83e-15 75.1
Msa0357120 MtrunA17_Chr3g0117511 33.333 105 68 2 15 118 183 286 1.94e-15 76.3
Msa0357120 MtrunA17_Chr2g0294811 40.860 93 53 2 1 92 1 92 2.10e-15 71.2
Msa0357120 MtrunA17_Chr4g0042611 41.573 89 50 2 1 88 1 88 3.47e-15 69.7
Msa0357120 MtrunA17_Chr7g0254261 41.748 103 56 4 15 115 89 189 4.75e-15 74.7
Msa0357120 MtrunA17_Chr7g0238631 38.889 108 64 2 10 116 108 214 1.18e-14 74.3
Msa0357120 MtrunA17_Chr6g0460661 36.957 92 55 3 20 110 22 111 1.21e-14 70.5
Msa0357120 MtrunA17_Chr3g0099141 39.024 82 49 1 13 93 40 121 1.25e-14 69.7
Msa0357120 MtrunA17_Chr8g0342531 40.449 89 52 1 2 89 1 89 2.13e-14 69.7
Msa0357120 MtrunA17_Chr6g0460671 37.383 107 63 4 15 119 99 203 4.81e-14 71.6
Msa0357120 MtrunA17_Chr7g0228531 41.176 68 39 1 48 115 253 319 1.25e-13 70.9
Msa0357120 MtrunA17_Chr3g0139671 43.478 69 39 0 48 116 118 186 2.20e-13 70.5
Msa0357120 MtrunA17_Chr4g0042621 72.500 40 11 0 89 128 15 54 2.92e-13 69.3
Msa0357120 MtrunA17_Chr1g0157731 42.029 69 40 0 48 116 124 192 3.84e-13 69.7
Msa0357120 MtrunA17_Chr5g0395221 37.975 79 48 1 11 88 10 88 4.81e-13 63.9
Msa0357120 MtrunA17_Chr8g0342511 40.909 88 50 2 1 87 1 87 7.97e-13 63.5
Msa0357120 MtrunA17_Chr5g0434871 60.465 43 17 0 74 116 2 44 9.74e-13 62.4
Msa0357120 MtrunA17_Chr7g0228401 41.270 63 37 0 48 110 312 374 1.31e-12 67.8
Msa0357120 MtrunA17_Chr8g0342461 37.363 91 54 3 1 89 1 90 2.13e-12 63.5
Msa0357120 MtrunA17_Chr8g0342471 37.363 91 54 3 1 89 1 90 7.08e-12 62.0
Msa0357120 MtrunA17_Chr7g0228481 36.364 110 60 5 13 115 218 324 1.11e-11 65.1
Msa0357120 MtrunA17_Chr5g0397841 40.000 85 38 3 37 109 121 204 2.98e-11 63.9
Msa0357120 MtrunA17_Chr3g0145551 61.538 39 15 0 91 129 1 39 4.76e-11 58.2
Msa0357120 MtrunA17_Chr1g0177901 36.508 63 40 0 48 110 27 89 6.03e-11 60.8
Msa0357120 MtrunA17_Chr7g0233061 26.119 134 85 2 9 136 174 299 7.47e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0357120 AT3G28470.1 40.785 331 143 12 1 295 1 314 8.40e-57 186
Msa0357120 AT1G18960.1 36.145 332 154 11 1 299 1 307 9.54e-49 164
Msa0357120 AT5G56110.1 59.854 137 51 4 1 135 1 135 5.62e-48 163
Msa0357120 AT4G21440.1 42.690 171 93 4 1 168 1 169 4.90e-40 143
Msa0357120 AT5G15310.4 52.713 129 59 2 1 128 1 128 8.56e-40 139
Msa0357120 AT4G17785.2 51.163 129 62 1 1 128 1 129 1.84e-39 141
Msa0357120 AT4G17785.1 51.163 129 62 1 1 128 1 129 2.55e-39 141
Msa0357120 AT3G01140.2 53.125 128 58 2 1 127 1 127 2.74e-39 141
Msa0357120 AT4G05100.1 48.062 129 66 1 1 128 1 129 2.94e-39 140
Msa0357120 AT5G15310.1 52.713 129 59 2 1 128 1 128 4.26e-39 140
Msa0357120 AT5G15310.2 52.713 129 59 2 1 128 1 128 4.33e-39 140
Msa0357120 AT1G57560.2 50.000 132 64 2 1 131 1 131 1.08e-38 137
Msa0357120 AT1G57560.1 49.624 133 65 2 1 132 1 132 1.14e-38 139
Msa0357120 AT4G28110.1 48.837 129 64 2 1 128 1 128 1.47e-38 137
Msa0357120 AT3G01140.1 52.344 128 59 2 1 127 44 170 2.37e-38 139
Msa0357120 AT1G18710.1 48.120 133 62 2 13 138 12 144 3.99e-38 136
Msa0357120 AT5G61420.2 48.800 125 63 1 7 130 6 130 8.01e-38 137
Msa0357120 AT4G34990.1 48.485 132 66 2 1 131 1 131 1.80e-37 134
Msa0357120 AT5G07690.1 49.600 125 62 1 7 130 6 130 2.14e-37 135
Msa0357120 AT5G65230.1 48.837 129 64 2 1 128 1 128 2.17e-37 135
Msa0357120 AT4G01680.3 48.872 133 66 2 1 132 1 132 2.72e-37 133
Msa0357120 AT5G16770.4 49.612 129 63 2 1 128 1 128 2.77e-37 135
Msa0357120 AT5G16770.3 49.612 129 63 2 1 128 1 128 2.77e-37 135
Msa0357120 AT5G26660.1 50.769 130 62 2 1 129 1 129 3.16e-37 135
Msa0357120 AT1G74430.1 51.282 117 56 1 13 128 12 128 3.36e-37 134
Msa0357120 AT5G16770.1 49.612 129 63 2 1 128 1 128 3.69e-37 135
Msa0357120 AT5G16770.2 49.612 129 63 2 1 128 1 128 3.69e-37 135
Msa0357120 AT1G09540.1 50.376 133 64 2 1 132 1 132 4.97e-37 135
Msa0357120 AT1G18570.1 48.092 131 67 1 1 130 1 131 6.44e-37 135
Msa0357120 AT4G01680.1 48.872 133 66 2 1 132 1 132 7.36e-37 134
Msa0357120 AT3G02940.2 48.837 129 64 2 1 128 1 128 9.56e-37 133
Msa0357120 AT5G60890.1 48.462 130 65 2 1 129 1 129 9.75e-37 133
Msa0357120 AT3G02940.1 48.837 129 64 2 1 128 1 128 1.35e-36 133
Msa0357120 AT3G02940.3 48.837 129 64 2 1 128 1 128 1.35e-36 133
Msa0357120 AT1G34670.1 48.148 135 68 2 1 134 1 134 1.63e-36 134
Msa0357120 AT1G66230.1 48.092 131 66 2 1 130 1 130 2.32e-36 132
Msa0357120 AT5G07700.1 50.420 119 58 1 13 130 12 130 3.02e-36 133
Msa0357120 AT5G07700.2 50.420 119 58 1 13 130 12 130 3.02e-36 133
Msa0357120 AT3G13540.1 48.438 128 65 1 3 129 13 140 5.42e-36 130
Msa0357120 AT5G10280.1 35.681 213 121 4 5 211 4 206 5.56e-36 132
Msa0357120 AT4G12350.1 46.324 136 71 2 1 135 1 135 6.73e-36 130
Msa0357120 AT5G54230.1 49.180 122 61 1 13 133 12 133 2.36e-35 130
Msa0357120 AT4G22680.1 46.212 132 69 2 1 131 1 131 4.32e-35 128
Msa0357120 AT4G38620.1 46.154 130 68 2 1 129 1 129 4.89e-35 128
Msa0357120 AT5G16600.1 42.169 166 94 2 1 165 1 165 9.38e-35 129
Msa0357120 AT2G16720.1 46.875 128 66 2 1 127 1 127 1.14e-34 127
Msa0357120 AT1G35515.1 48.031 127 64 2 1 126 1 126 5.57e-34 123
Msa0357120 AT1G74080.1 45.385 130 69 2 1 129 1 129 6.70e-34 126
Msa0357120 AT3G61250.1 46.154 130 68 2 1 129 1 129 7.42e-34 125
Msa0357120 AT4G01680.2 44.828 145 66 3 1 132 1 144 1.72e-33 125
Msa0357120 AT5G14340.1 46.617 133 69 2 1 132 13 144 1.80e-33 124
Msa0357120 AT1G22640.1 45.312 128 68 2 1 127 1 127 2.24e-33 123
Msa0357120 AT5G14750.1 50.427 117 57 1 2 117 5 121 2.83e-33 121
Msa0357120 AT4G09460.1 46.094 128 67 2 1 127 1 127 4.67e-33 122
Msa0357120 AT4G37780.1 52.542 118 53 3 1 116 1 117 5.26e-33 123
Msa0357120 AT5G62320.1 43.796 137 68 3 3 131 4 139 1.59e-32 120
Msa0357120 AT3G49690.1 52.542 118 53 3 1 116 1 117 9.05e-32 120
Msa0357120 AT3G27920.1 47.414 116 60 1 2 116 3 118 2.60e-31 117
Msa0357120 AT5G40330.1 51.429 105 50 1 14 117 13 117 4.08e-31 116
Msa0357120 AT5G57620.1 50.847 118 55 3 1 116 1 117 4.36e-31 119
Msa0357120 AT5G23000.1 53.782 119 50 5 1 116 1 117 5.70e-31 119
Msa0357120 AT3G12720.1 47.107 121 62 2 7 126 17 136 1.13e-30 117
Msa0357120 AT2G36890.1 49.612 129 60 5 1 126 1 127 1.47e-30 117
Msa0357120 AT5G52600.1 44.275 131 63 2 8 128 7 137 1.56e-30 114
Msa0357120 AT1G79180.1 51.282 117 55 2 3 118 5 120 2.58e-30 116
Msa0357120 AT2G36890.2 49.612 129 60 5 1 126 42 168 2.64e-30 117
Msa0357120 AT5G65790.1 50.000 118 56 3 1 116 1 117 2.76e-30 117
Msa0357120 AT3G23250.1 49.573 117 57 2 1 116 1 116 3.11e-30 115
Msa0357120 AT1G16490.1 50.000 116 56 2 3 117 5 119 4.51e-30 115
Msa0357120 AT2G47460.1 44.776 134 72 2 1 133 1 133 1.15e-29 116
Msa0357120 AT5G26660.2 54.839 93 42 0 37 129 6 98 1.21e-29 115
Msa0357120 AT3G47600.1 49.167 120 59 2 1 119 1 119 1.77e-29 114
Msa0357120 AT3G62610.1 48.718 117 58 2 1 116 1 116 2.56e-29 114
Msa0357120 AT3G28910.1 47.967 123 62 2 1 122 1 122 2.59e-29 114
Msa0357120 AT5G62470.2 50.000 120 58 2 1 119 1 119 2.60e-29 114
Msa0357120 AT4G26930.1 49.038 104 52 1 12 114 18 121 4.10e-29 115
Msa0357120 AT1G63910.1 42.742 124 70 1 6 128 5 128 4.45e-29 114
Msa0357120 AT5G55020.1 48.148 108 55 1 12 118 25 132 1.12e-28 115
Msa0357120 AT5G49330.1 47.863 117 59 2 1 116 1 116 1.19e-28 112
Msa0357120 AT2G31180.1 47.899 119 60 2 1 118 1 118 1.25e-28 110
Msa0357120 AT3G13890.2 47.863 117 59 2 1 116 1 116 1.33e-28 113
Msa0357120 AT1G56160.1 48.276 116 58 2 3 117 5 119 1.40e-28 111
Msa0357120 AT3G12820.1 47.826 115 59 1 3 116 4 118 2.48e-28 109
Msa0357120 AT1G06180.1 47.899 119 60 2 1 118 1 118 2.84e-28 109
Msa0357120 AT1G74650.1 49.167 120 59 2 1 119 1 119 3.83e-28 111
Msa0357120 AT5G35550.1 41.739 115 66 1 3 116 4 118 9.15e-28 108
Msa0357120 AT1G08810.1 47.899 119 60 2 1 118 1 118 1.49e-27 108
Msa0357120 AT5G62470.1 50.000 120 57 3 1 119 1 118 2.46e-27 109
Msa0357120 AT5G12870.1 42.735 117 66 1 4 119 9 125 9.85e-27 106
Msa0357120 AT3G11440.2 44.444 108 59 1 9 115 37 144 1.06e-26 109
Msa0357120 AT3G11440.3 44.444 108 59 1 9 115 37 144 2.44e-26 108
Msa0357120 AT3G11440.4 44.444 108 59 1 9 115 37 144 2.44e-26 108
Msa0357120 AT3G11440.1 44.444 108 59 1 9 115 37 144 2.44e-26 108
Msa0357120 AT2G32460.2 45.192 104 56 1 13 115 6 109 4.96e-26 107
Msa0357120 AT2G32460.1 45.192 104 56 1 13 115 18 121 5.26e-26 107
Msa0357120 AT2G47190.1 41.667 120 69 1 4 122 11 130 5.73e-26 104
Msa0357120 AT3G13890.1 44.444 126 59 3 1 116 1 125 8.67e-26 105
Msa0357120 AT5G06100.1 45.714 105 56 1 12 115 31 135 2.38e-25 105
Msa0357120 AT1G25340.1 41.322 121 70 1 8 127 13 133 3.98e-25 102
Msa0357120 AT3G01530.1 42.105 114 65 1 4 116 16 129 5.65e-25 99.8
Msa0357120 AT5G06100.5 45.714 105 56 1 12 115 31 135 5.88e-25 104
Msa0357120 AT5G06100.2 45.714 105 56 1 12 115 31 135 5.88e-25 104
Msa0357120 AT5G06100.3 45.714 105 56 1 12 115 31 135 5.88e-25 104
Msa0357120 AT5G06100.4 45.714 105 56 1 12 115 31 135 5.88e-25 104
Msa0357120 AT2G26960.1 32.292 192 121 4 4 187 8 198 6.86e-25 103
Msa0357120 AT1G48000.1 42.623 122 68 2 13 133 32 152 8.24e-25 100
Msa0357120 AT4G25560.1 45.631 103 55 1 14 115 11 113 1.16e-24 100
Msa0357120 AT1G68320.1 41.322 121 70 1 13 132 19 139 1.63e-24 100
Msa0357120 AT1G79180.2 40.000 150 55 3 3 118 5 153 2.67e-24 100
Msa0357120 AT4G13480.1 47.619 105 54 1 12 115 5 109 3.91e-24 99.0
Msa0357120 AT3G24310.1 46.602 103 54 1 14 115 19 121 1.57e-23 97.4
Msa0357120 AT3G08500.1 44.762 105 57 1 13 116 30 134 1.65e-23 99.0
Msa0357120 AT3G27810.1 42.056 107 61 1 13 118 20 126 2.68e-23 95.9
Msa0357120 AT5G40350.1 42.202 109 62 1 13 120 17 125 2.96e-23 95.5
Msa0357120 AT5G14750.3 56.410 78 31 1 40 117 13 87 4.02e-23 94.0
Msa0357120 AT1G66370.1 45.192 104 56 1 13 115 8 111 5.85e-23 95.5
Msa0357120 AT3G48920.1 40.952 105 61 1 14 117 19 123 8.72e-23 95.5
Msa0357120 AT1G71030.2 51.899 79 38 0 49 127 3 81 1.30e-22 92.8
Msa0357120 AT1G71030.1 51.899 79 38 0 49 127 17 95 1.46e-22 93.2
Msa0357120 AT5G59780.3 45.631 103 55 1 14 115 9 111 3.69e-22 93.2
Msa0357120 AT3G30210.1 42.718 103 58 1 13 114 27 129 3.72e-22 94.0
Msa0357120 AT5G35550.2 54.167 72 33 0 45 116 50 121 5.76e-22 93.2
Msa0357120 AT5G52260.1 44.660 103 56 1 14 115 13 115 5.77e-22 93.2
Msa0357120 AT3G46130.1 44.660 103 56 1 14 115 10 112 1.32e-21 92.0
Msa0357120 AT5G59780.2 49.438 89 40 1 27 115 7 90 2.59e-21 90.1
Msa0357120 AT3G53200.1 39.568 139 73 4 9 145 5 134 5.82e-21 89.7
Msa0357120 AT1G25340.2 38.843 121 68 2 8 127 13 128 1.53e-20 89.7
Msa0357120 AT3G47600.2 45.545 101 49 2 25 119 13 113 2.26e-20 89.7
Msa0357120 AT2G26950.1 36.090 133 80 3 21 149 25 156 2.45e-20 90.5
Msa0357120 AT1G25340.3 38.843 121 68 2 8 127 13 128 2.72e-20 89.4
Msa0357120 AT3G06490.1 40.164 122 72 1 2 122 8 129 3.44e-20 89.4
Msa0357120 AT3G46130.4 53.425 73 34 0 43 115 18 90 4.12e-20 87.4
Msa0357120 AT3G46130.3 54.167 72 33 0 44 115 9 80 4.76e-20 87.0
Msa0357120 AT1G66380.1 46.154 104 55 1 13 115 8 111 7.61e-20 84.3
Msa0357120 AT3G12820.2 56.522 69 30 0 48 116 2 70 9.04e-20 85.5
Msa0357120 AT3G27810.2 50.000 74 37 0 45 118 4 77 1.66e-19 84.3
Msa0357120 AT5G49620.1 41.441 111 64 1 13 122 26 136 2.42e-19 86.7
Msa0357120 AT1G22640.3 56.897 58 25 0 70 127 13 70 3.34e-19 84.3
Msa0357120 AT5G40350.2 50.000 76 38 0 45 120 5 80 3.69e-19 83.2
Msa0357120 AT1G69560.1 37.500 120 71 4 1 118 93 210 7.22e-19 85.9
Msa0357120 AT1G69560.2 37.500 120 71 4 1 118 109 226 8.17e-19 85.9
Msa0357120 AT1G26780.1 41.284 109 60 4 12 118 95 201 1.01e-18 84.7
Msa0357120 AT3G60460.1 40.741 108 62 2 9 114 7 114 1.53e-18 84.3
Msa0357120 AT1G26780.2 41.284 109 60 4 12 118 95 201 1.93e-18 84.7
Msa0357120 AT2G23290.1 43.299 97 54 1 21 117 20 115 2.62e-18 84.0
Msa0357120 AT3G53200.2 45.455 99 44 3 43 140 7 96 2.72e-18 81.6
Msa0357120 AT3G29020.1 38.532 109 63 4 12 118 62 168 5.16e-18 81.6
Msa0357120 AT1G56650.1 40.496 121 61 2 13 132 8 118 7.13e-18 81.6
Msa0357120 AT1G17950.1 41.509 106 58 4 12 115 2 105 1.40e-17 80.9
Msa0357120 AT1G66390.1 43.269 104 58 1 13 115 8 111 1.73e-17 80.5
Msa0357120 AT3G29020.2 38.532 109 63 4 12 118 64 170 2.13e-17 81.3
Msa0357120 AT4G37260.1 35.811 148 80 5 4 149 2 136 3.57e-17 80.9
Msa0357120 AT5G61420.1 64.000 50 18 0 81 130 2 51 3.70e-17 80.1
Msa0357120 AT5G67300.1 39.423 104 61 2 15 117 6 108 7.26e-17 79.7
Msa0357120 AT2G39880.1 53.623 69 30 2 48 115 83 150 7.57e-17 80.5
Msa0357120 AT5G14750.4 66.667 48 16 0 70 117 13 60 7.90e-17 76.3
Msa0357120 AT5G14750.2 66.667 48 16 0 70 117 13 60 7.90e-17 76.3
Msa0357120 AT5G17800.1 33.557 149 93 5 2 148 80 224 1.00e-16 79.7
Msa0357120 AT1G73410.2 43.396 106 56 4 15 118 6 109 1.55e-16 77.0
Msa0357120 AT1G73410.1 43.396 106 56 4 15 118 6 109 1.98e-16 77.4
Msa0357120 AT3G55730.1 39.815 108 59 5 15 119 56 160 2.03e-16 79.3
Msa0357120 AT3G50060.1 39.423 104 61 2 15 117 6 108 4.03e-16 77.4
Msa0357120 AT3G27785.1 34.454 119 76 2 1 118 175 292 4.18e-16 78.6
Msa0357120 AT1G66380.3 55.556 72 32 0 44 115 7 78 4.64e-16 73.2
Msa0357120 AT5G49620.2 36.800 125 64 2 13 122 26 150 5.85e-16 77.4
Msa0357120 AT3G09230.1 46.377 69 37 0 48 116 88 156 1.10e-15 77.0
Msa0357120 AT5G02320.1 39.815 108 63 2 10 116 122 228 1.16e-15 77.4
Msa0357120 AT5G02320.2 39.815 108 63 2 10 116 122 228 1.16e-15 77.4
Msa0357120 AT5G02320.3 39.815 108 63 2 10 116 62 168 1.47e-15 77.0
Msa0357120 AT4G18770.1 29.688 128 88 1 9 136 211 336 3.91e-15 75.9
Msa0357120 AT3G09370.3 37.383 107 65 2 10 115 138 243 1.09e-14 74.7
Msa0357120 AT5G11050.1 35.514 107 67 2 13 118 103 208 1.22e-14 74.3
Msa0357120 AT3G09370.2 37.383 107 65 2 10 115 130 235 1.27e-14 74.3
Msa0357120 AT5G58850.1 35.238 105 66 2 15 118 105 208 1.28e-14 74.3
Msa0357120 AT3G09370.1 37.383 107 65 2 10 115 125 230 1.51e-14 74.3
Msa0357120 AT5G40360.1 32.407 108 71 2 8 114 151 257 1.75e-14 73.6
Msa0357120 AT5G15310.3 73.171 41 11 0 88 128 9 49 1.91e-14 72.0
Msa0357120 AT2G25230.1 33.858 127 80 3 1 124 12 137 2.81e-14 71.2
Msa0357120 AT3G23250.2 61.702 47 18 0 70 116 13 59 4.16e-14 70.9
Msa0357120 AT4G33450.1 38.532 109 63 4 9 115 13 119 4.99e-14 70.9
Msa0357120 AT4G28110.2 65.854 41 14 0 88 128 4 44 6.20e-14 69.7
Msa0357120 AT1G74430.2 61.905 42 16 0 87 128 18 59 7.41e-14 69.3
Msa0357120 AT5G11510.5 42.029 69 40 0 48 116 114 182 1.92e-13 71.2
Msa0357120 AT5G11510.3 42.029 69 40 0 48 116 114 182 1.92e-13 71.2
Msa0357120 AT5G11510.1 42.029 69 40 0 48 116 114 182 1.92e-13 71.2
Msa0357120 AT5G11510.4 42.029 69 40 0 48 116 114 182 1.92e-13 71.2
Msa0357120 AT5G11510.2 42.029 69 40 0 48 116 114 182 1.92e-13 71.2
Msa0357120 AT5G14340.2 56.522 46 20 0 87 132 9 54 2.98e-13 67.4
Msa0357120 AT5G59780.1 58.696 46 19 0 70 115 1 46 1.30e-12 65.5
Msa0357120 AT3G46130.2 53.571 56 25 1 70 125 1 55 1.79e-12 65.5
Msa0357120 AT4G00540.2 36.449 107 59 3 48 154 139 236 3.02e-12 67.0
Msa0357120 AT4G32730.5 40.580 69 41 0 48 116 120 188 3.57e-12 67.4
Msa0357120 AT4G32730.4 40.580 69 41 0 48 116 120 188 3.57e-12 67.4
Msa0357120 AT4G32730.3 40.580 69 41 0 48 116 120 188 3.57e-12 67.4
Msa0357120 AT4G32730.2 40.580 69 41 0 48 116 120 188 3.57e-12 67.4
Msa0357120 AT4G32730.1 40.580 69 41 0 48 116 120 188 3.62e-12 67.4
Msa0357120 AT4G00540.1 41.667 72 42 0 48 119 137 208 3.83e-12 66.6
Msa0357120 AT1G22640.2 62.500 40 15 0 88 127 16 55 7.79e-12 63.5
Msa0357120 AT5G39700.1 34.862 109 67 4 8 114 49 155 8.24e-11 60.5
Msa0357120 AT5G40430.1 35.616 73 47 0 48 120 86 158 9.47e-11 61.6
Msa0357120 AT3G28910.2 58.696 46 19 0 77 122 1 46 9.98e-11 61.2

Find 43 sgRNAs with CRISPR-Local

Find 182 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTCATAACTGTTTCCATTT+TGG 0.092201 3_1:-37870403 None:intergenic
TCTAAACTCATTGCTGATTA+TGG 0.130701 3_1:+37870288 Msa0357120:CDS
TAATCCAACATCAATGTTTA+TGG 0.159625 3_1:+37870485 Msa0357120:CDS
CTAAAATTTGTTGTTCTTGC+AGG 0.216669 3_1:-37870632 None:intergenic
TCTAAGCTTTCCTGAACTTT+TGG 0.228314 3_1:+37870758 Msa0357120:CDS
TGTTGGATTATTATTATTAC+TGG 0.243760 3_1:-37870472 None:intergenic
GAGAAAGGCTTGTGAGTAAC+AGG 0.271065 3_1:-37870267 None:intergenic
TAACGATTAGATCTTCTTCT+TGG 0.278556 3_1:-37870116 None:intergenic
AAAGCAATTGCCACCCAAAA+TGG 0.287493 3_1:+37870389 Msa0357120:CDS
AGAAAGTCATTCCAACTAAA+TGG 0.304797 3_1:-37870570 None:intergenic
ATCATAGCTCAACAACTTCC+TGG 0.362064 3_1:+37870171 Msa0357120:CDS
TGTTCTTGCAGGTTATTAGT+AGG 0.374223 3_1:-37870621 None:intergenic
ATTGCTGATTATGGAAATAT+AGG 0.383788 3_1:+37870297 Msa0357120:CDS
GATGGTTCCTCCAAAAGTTC+AGG 0.395834 3_1:-37870768 None:intergenic
ACAATGATGTTAAGAACAAT+TGG 0.395885 3_1:+37870202 Msa0357120:CDS
TTAACAGGTGTTAAGAGGTA+TGG 0.406926 3_1:+37870027 Msa0357120:intron
GTTTCTTGTGTTGAAGGTAA+TGG 0.419625 3_1:-37870534 None:intergenic
AACGATTAGATCTTCTTCTT+GGG 0.424842 3_1:-37870115 None:intergenic
TGGGTGGCAATTGCTTTGAT+TGG 0.436587 3_1:-37870383 None:intergenic
AAGTTTGTTTCTTGTGTTGA+AGG 0.448562 3_1:-37870540 None:intergenic
CCTTCATTTGCCTCAGAACA+TGG 0.456576 3_1:+37869266 Msa0357120:CDS
GCTTCCATAAACATTGATGT+TGG 0.479934 3_1:-37870489 None:intergenic
GTGTCATCAAAAGAGGTGTA+TGG 0.486661 3_1:+37869222 Msa0357120:CDS
GTGAACTTATCATCATGCTT+AGG 0.502782 3_1:-37870090 None:intergenic
GATAGACCACCTACTACCTA+TGG 0.517239 3_1:-37870151 None:intergenic
TGAACTGATTAGTAATTGGA+TGG 0.519558 3_1:-37870786 None:intergenic
CCATGTTCTGAGGCAAATGA+AGG 0.535126 3_1:-37869266 None:intergenic
ACATCATTGTCTGTTCTCCC+AGG 0.541477 3_1:-37870189 None:intergenic
TCAGCAATGAGTTTAGAGAA+AGG 0.549669 3_1:-37870282 None:intergenic
TCATAGCTCAACAACTTCCT+GGG 0.565623 3_1:+37870172 Msa0357120:CDS
TTCATGCAGCCATAGGTAGT+AGG 0.572814 3_1:+37870142 Msa0357120:CDS
GTTAAGCTTCATGCAGCCAT+AGG 0.575069 3_1:+37870135 Msa0357120:CDS
CTGAGGATGATGACGAGACT+TGG 0.583127 3_1:-37870689 None:intergenic
ATCATGCTTAGGATCAAGCA+TGG 0.606048 3_1:-37870079 None:intergenic
CTCAGACATTTCATTCGTAG+AGG 0.608725 3_1:+37870707 Msa0357120:CDS
AAAAGAAGCTTTCTCAAATG+GGG 0.633115 3_1:+37870238 Msa0357120:CDS
ATTAACAGATCCATGTTCTG+AGG 0.633527 3_1:-37869276 None:intergenic
ATGGATTGCAGAAGATGCAA+AGG 0.638505 3_1:+37869241 Msa0357120:CDS
TATTAGCAGAAAACATGGTG+AGG 0.644952 3_1:+37869177 None:intergenic
ATGCAGCCATAGGTAGTAGG+TGG 0.657431 3_1:+37870145 Msa0357120:CDS
CTCTACGAATGAAATGTCTG+AGG 0.666993 3_1:-37870706 None:intergenic
GCTGATTATGGAAATATAGG+TGG 0.681369 3_1:+37870300 Msa0357120:CDS
AGAAAGGCTTGTGAGTAACA+GGG 0.701057 3_1:-37870266 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATCTATATTTTTAGCAAATT+TGG - chr3_1:37869544-37869563 None:intergenic 15.0%
!! TTAAATTACACATGAATATA+AGG + chr3_1:37869617-37869636 Msa0357120:intron 15.0%
!!! AAGAATATGTTTTTATTAAC+AGG + chr3_1:37870012-37870031 Msa0357120:intron 15.0%
!!! ATCTATATTTTTAGCAAATT+TGG - chr3_1:37869544-37869563 None:intergenic 15.0%
!! TTAAATTACACATGAATATA+AGG + chr3_1:37869617-37869636 Msa0357120:intron 15.0%
!!! AAGAATATGTTTTTATTAAC+AGG + chr3_1:37870012-37870031 Msa0357120:intron 15.0%
!!! TTATTATCTTTTCCAACTTA+TGG + chr3_1:37869380-37869399 Msa0357120:intron 20.0%
!!! ATATTTTTAGCAAATTTGGT+TGG - chr3_1:37869540-37869559 None:intergenic 20.0%
!!! AAATTGATTTTGATTGCATT+AGG + chr3_1:37869741-37869760 Msa0357120:intron 20.0%
!! TGTTGGATTATTATTATTAC+TGG - chr3_1:37870475-37870494 None:intergenic 20.0%
!!! TTATTATCTTTTCCAACTTA+TGG + chr3_1:37869380-37869399 Msa0357120:intron 20.0%
!!! ATATTTTTAGCAAATTTGGT+TGG - chr3_1:37869540-37869559 None:intergenic 20.0%
!!! AAATTGATTTTGATTGCATT+AGG + chr3_1:37869741-37869760 Msa0357120:intron 20.0%
!! TGTTGGATTATTATTATTAC+TGG - chr3_1:37870475-37870494 None:intergenic 20.0%
! AAAAATAGTGTCATCAAAAG+AGG + chr3_1:37869215-37869234 Msa0357120:CDS 25.0%
! AAAACAAAGAAACCATAAGT+TGG - chr3_1:37869395-37869414 None:intergenic 25.0%
!! TTTTATTAACAGGTGTTAAG+AGG + chr3_1:37870022-37870041 Msa0357120:intron 25.0%
! ACAATGATGTTAAGAACAAT+TGG + chr3_1:37870202-37870221 Msa0357120:CDS 25.0%
! AAAAAGAAGCTTTCTCAAAT+GGG + chr3_1:37870237-37870256 Msa0357120:CDS 25.0%
!! ATTGCTGATTATGGAAATAT+AGG + chr3_1:37870297-37870316 Msa0357120:CDS 25.0%
!!! GTCATTTTAATCAAGACTTT+AGG + chr3_1:37870331-37870350 Msa0357120:CDS 25.0%
!! TTCATAACTGTTTCCATTTT+GGG - chr3_1:37870405-37870424 None:intergenic 25.0%
!! ATTCATAACTGTTTCCATTT+TGG - chr3_1:37870406-37870425 None:intergenic 25.0%
!!! CATTTTCTACTTTTGTCATT+GGG - chr3_1:37870449-37870468 None:intergenic 25.0%
!!! TCATTTTCTACTTTTGTCAT+TGG - chr3_1:37870450-37870469 None:intergenic 25.0%
! TAATCCAACATCAATGTTTA+TGG + chr3_1:37870485-37870504 Msa0357120:CDS 25.0%
! AAAAATAGTGTCATCAAAAG+AGG + chr3_1:37869215-37869234 Msa0357120:CDS 25.0%
! AAAACAAAGAAACCATAAGT+TGG - chr3_1:37869395-37869414 None:intergenic 25.0%
!! TTTTATTAACAGGTGTTAAG+AGG + chr3_1:37870022-37870041 Msa0357120:intron 25.0%
! ACAATGATGTTAAGAACAAT+TGG + chr3_1:37870202-37870221 Msa0357120:CDS 25.0%
! AAAAAGAAGCTTTCTCAAAT+GGG + chr3_1:37870237-37870256 Msa0357120:CDS 25.0%
!! ATTGCTGATTATGGAAATAT+AGG + chr3_1:37870297-37870316 Msa0357120:CDS 25.0%
!!! GTCATTTTAATCAAGACTTT+AGG + chr3_1:37870331-37870350 Msa0357120:CDS 25.0%
!! TTCATAACTGTTTCCATTTT+GGG - chr3_1:37870405-37870424 None:intergenic 25.0%
!! ATTCATAACTGTTTCCATTT+TGG - chr3_1:37870406-37870425 None:intergenic 25.0%
!!! CATTTTCTACTTTTGTCATT+GGG - chr3_1:37870449-37870468 None:intergenic 25.0%
!!! TCATTTTCTACTTTTGTCAT+TGG - chr3_1:37870450-37870469 None:intergenic 25.0%
! TAATCCAACATCAATGTTTA+TGG + chr3_1:37870485-37870504 Msa0357120:CDS 25.0%
!!! GTCTCTAACCTGTTTTTTTA+GGG - chr3_1:37869313-37869332 None:intergenic 30.0%
!!! AGTCTCTAACCTGTTTTTTT+AGG - chr3_1:37869314-37869333 None:intergenic 30.0%
TCAAAGTAACCAATGTTTCT+AGG - chr3_1:37869717-37869736 None:intergenic 30.0%
! AGAAACATTGGTTACTTTGA+AGG + chr3_1:37869717-37869736 Msa0357120:intron 30.0%
! TAGGTTGAAAAGTTTACATC+AGG + chr3_1:37869760-37869779 Msa0357120:intron 30.0%
!! CAGTAAAGTTGATGAATACA+TGG + chr3_1:37869977-37869996 Msa0357120:intron 30.0%
AACGATTAGATCTTCTTCTT+GGG - chr3_1:37870118-37870137 None:intergenic 30.0%
TAACGATTAGATCTTCTTCT+TGG - chr3_1:37870119-37870138 None:intergenic 30.0%
GAAAAAGAAGCTTTCTCAAA+TGG + chr3_1:37870236-37870255 Msa0357120:CDS 30.0%
AAAAGAAGCTTTCTCAAATG+GGG + chr3_1:37870238-37870257 Msa0357120:CDS 30.0%
! TCTAAACTCATTGCTGATTA+TGG + chr3_1:37870288-37870307 Msa0357120:CDS 30.0%
! AAGTTTGTTTCTTGTGTTGA+AGG - chr3_1:37870543-37870562 None:intergenic 30.0%
AGAAAGTCATTCCAACTAAA+TGG - chr3_1:37870573-37870592 None:intergenic 30.0%
!! CTAAAATTTGTTGTTCTTGC+AGG - chr3_1:37870635-37870654 None:intergenic 30.0%
! CTGCAAGAACAACAAATTTT+AGG + chr3_1:37870633-37870652 Msa0357120:CDS 30.0%
! CAAGAACAACAAATTTTAGG+TGG + chr3_1:37870636-37870655 Msa0357120:CDS 30.0%
! TGGATTGTTTTCAAAGAAAG+AGG + chr3_1:37870656-37870675 Msa0357120:CDS 30.0%
!!! GTCTCTAACCTGTTTTTTTA+GGG - chr3_1:37869313-37869332 None:intergenic 30.0%
!!! AGTCTCTAACCTGTTTTTTT+AGG - chr3_1:37869314-37869333 None:intergenic 30.0%
TCAAAGTAACCAATGTTTCT+AGG - chr3_1:37869717-37869736 None:intergenic 30.0%
! AGAAACATTGGTTACTTTGA+AGG + chr3_1:37869717-37869736 Msa0357120:intron 30.0%
! TAGGTTGAAAAGTTTACATC+AGG + chr3_1:37869760-37869779 Msa0357120:intron 30.0%
!! CAGTAAAGTTGATGAATACA+TGG + chr3_1:37869977-37869996 Msa0357120:intron 30.0%
AACGATTAGATCTTCTTCTT+GGG - chr3_1:37870118-37870137 None:intergenic 30.0%
TAACGATTAGATCTTCTTCT+TGG - chr3_1:37870119-37870138 None:intergenic 30.0%
GAAAAAGAAGCTTTCTCAAA+TGG + chr3_1:37870236-37870255 Msa0357120:CDS 30.0%
AAAAGAAGCTTTCTCAAATG+GGG + chr3_1:37870238-37870257 Msa0357120:CDS 30.0%
! TCTAAACTCATTGCTGATTA+TGG + chr3_1:37870288-37870307 Msa0357120:CDS 30.0%
! AAGTTTGTTTCTTGTGTTGA+AGG - chr3_1:37870543-37870562 None:intergenic 30.0%
AGAAAGTCATTCCAACTAAA+TGG - chr3_1:37870573-37870592 None:intergenic 30.0%
!! CTAAAATTTGTTGTTCTTGC+AGG - chr3_1:37870635-37870654 None:intergenic 30.0%
! CTGCAAGAACAACAAATTTT+AGG + chr3_1:37870633-37870652 Msa0357120:CDS 30.0%
! CAAGAACAACAAATTTTAGG+TGG + chr3_1:37870636-37870655 Msa0357120:CDS 30.0%
! TGGATTGTTTTCAAAGAAAG+AGG + chr3_1:37870656-37870675 Msa0357120:CDS 30.0%
ATTAACAGATCCATGTTCTG+AGG - chr3_1:37869279-37869298 None:intergenic 35.0%
ACTTCTGTCCCTAAAAAAAC+AGG + chr3_1:37869302-37869321 Msa0357120:CDS 35.0%
ACACATGAATATAAGGCAAG+CGG + chr3_1:37869624-37869643 Msa0357120:intron 35.0%
!!! ATTGGTTTTGCCGTTCAAAA+AGG - chr3_1:37869670-37869689 None:intergenic 35.0%
AATGTTAGGTTTACGAGGAT+TGG - chr3_1:37869688-37869707 None:intergenic 35.0%
TTTCTAGGTCCATGAATGTT+AGG - chr3_1:37869702-37869721 None:intergenic 35.0%
ATTCATGGACCTAGAAACAT+TGG + chr3_1:37869705-37869724 Msa0357120:intron 35.0%
TTAACAGGTGTTAAGAGGTA+TGG + chr3_1:37870027-37870046 Msa0357120:intron 35.0%
GTGAACTTATCATCATGCTT+AGG - chr3_1:37870093-37870112 None:intergenic 35.0%
TCAGCAATGAGTTTAGAGAA+AGG - chr3_1:37870285-37870304 None:intergenic 35.0%
GCTGATTATGGAAATATAGG+TGG + chr3_1:37870300-37870319 Msa0357120:CDS 35.0%
! ATAACTGTTTCCATTTTGGG+TGG - chr3_1:37870402-37870421 None:intergenic 35.0%
!! TTCTACTTTTGTCATTGGGA+TGG - chr3_1:37870445-37870464 None:intergenic 35.0%
GCTTCCATAAACATTGATGT+TGG - chr3_1:37870492-37870511 None:intergenic 35.0%
GTTTCTTGTGTTGAAGGTAA+TGG - chr3_1:37870537-37870556 None:intergenic 35.0%
! ACTTTTCTGCACCATTTAGT+TGG + chr3_1:37870559-37870578 Msa0357120:CDS 35.0%
TGTTCTTGCAGGTTATTAGT+AGG - chr3_1:37870624-37870643 None:intergenic 35.0%
! CTCATTTTCTTGATCGAGTA+TGG - chr3_1:37870733-37870752 None:intergenic 35.0%
! TCTAAGCTTTCCTGAACTTT+TGG + chr3_1:37870758-37870777 Msa0357120:CDS 35.0%
ATTAACAGATCCATGTTCTG+AGG - chr3_1:37869279-37869298 None:intergenic 35.0%
ACTTCTGTCCCTAAAAAAAC+AGG + chr3_1:37869302-37869321 Msa0357120:CDS 35.0%
ACACATGAATATAAGGCAAG+CGG + chr3_1:37869624-37869643 Msa0357120:intron 35.0%
!!! ATTGGTTTTGCCGTTCAAAA+AGG - chr3_1:37869670-37869689 None:intergenic 35.0%
AATGTTAGGTTTACGAGGAT+TGG - chr3_1:37869688-37869707 None:intergenic 35.0%
TTTCTAGGTCCATGAATGTT+AGG - chr3_1:37869702-37869721 None:intergenic 35.0%
ATTCATGGACCTAGAAACAT+TGG + chr3_1:37869705-37869724 Msa0357120:intron 35.0%
TTAACAGGTGTTAAGAGGTA+TGG + chr3_1:37870027-37870046 Msa0357120:intron 35.0%
GTGAACTTATCATCATGCTT+AGG - chr3_1:37870093-37870112 None:intergenic 35.0%
TCAGCAATGAGTTTAGAGAA+AGG - chr3_1:37870285-37870304 None:intergenic 35.0%
GCTGATTATGGAAATATAGG+TGG + chr3_1:37870300-37870319 Msa0357120:CDS 35.0%
! ATAACTGTTTCCATTTTGGG+TGG - chr3_1:37870402-37870421 None:intergenic 35.0%
!! TTCTACTTTTGTCATTGGGA+TGG - chr3_1:37870445-37870464 None:intergenic 35.0%
GCTTCCATAAACATTGATGT+TGG - chr3_1:37870492-37870511 None:intergenic 35.0%
GTTTCTTGTGTTGAAGGTAA+TGG - chr3_1:37870537-37870556 None:intergenic 35.0%
! ACTTTTCTGCACCATTTAGT+TGG + chr3_1:37870559-37870578 Msa0357120:CDS 35.0%
TGTTCTTGCAGGTTATTAGT+AGG - chr3_1:37870624-37870643 None:intergenic 35.0%
! CTCATTTTCTTGATCGAGTA+TGG - chr3_1:37870733-37870752 None:intergenic 35.0%
! TCTAAGCTTTCCTGAACTTT+TGG + chr3_1:37870758-37870777 Msa0357120:CDS 35.0%
! GTGTCATCAAAAGAGGTGTA+TGG + chr3_1:37869222-37869241 Msa0357120:CDS 40.0%
! ATGGATTGCAGAAGATGCAA+AGG + chr3_1:37869241-37869260 Msa0357120:CDS 40.0%
GCAAATTTGGTTGGACAGAA+AGG - chr3_1:37869531-37869550 None:intergenic 40.0%
CCATGAATGTTAGGTTTACG+AGG - chr3_1:37869693-37869712 None:intergenic 40.0%
CCTCGTAAACCTAACATTCA+TGG + chr3_1:37869690-37869709 Msa0357120:intron 40.0%
AATGAAGCAGAGACACTTCT+CGG - chr3_1:37869916-37869935 None:intergenic 40.0%
! AGAGGTATGGAAAAAGTTGC+AGG + chr3_1:37870040-37870059 Msa0357120:CDS 40.0%
ATGGAAAAAGTTGCAGGCTT+AGG + chr3_1:37870046-37870065 Msa0357120:CDS 40.0%
ATCATGCTTAGGATCAAGCA+TGG - chr3_1:37870082-37870101 None:intergenic 40.0%
ATCATAGCTCAACAACTTCC+TGG + chr3_1:37870171-37870190 Msa0357120:CDS 40.0%
TCATAGCTCAACAACTTCCT+GGG + chr3_1:37870172-37870191 Msa0357120:CDS 40.0%
AGAAAGGCTTGTGAGTAACA+GGG - chr3_1:37870269-37870288 None:intergenic 40.0%
AAAGCAATTGCCACCCAAAA+TGG + chr3_1:37870389-37870408 Msa0357120:CDS 40.0%
! CTTTTGTCATTGGGATGGTT+TGG - chr3_1:37870440-37870459 None:intergenic 40.0%
CTCTACGAATGAAATGTCTG+AGG - chr3_1:37870709-37870728 None:intergenic 40.0%
CTCAGACATTTCATTCGTAG+AGG + chr3_1:37870707-37870726 Msa0357120:CDS 40.0%
! AAGCTTTCCTGAACTTTTGG+AGG + chr3_1:37870761-37870780 Msa0357120:CDS 40.0%
! GTGTCATCAAAAGAGGTGTA+TGG + chr3_1:37869222-37869241 Msa0357120:CDS 40.0%
! ATGGATTGCAGAAGATGCAA+AGG + chr3_1:37869241-37869260 Msa0357120:CDS 40.0%
GCAAATTTGGTTGGACAGAA+AGG - chr3_1:37869531-37869550 None:intergenic 40.0%
CCATGAATGTTAGGTTTACG+AGG - chr3_1:37869693-37869712 None:intergenic 40.0%
CCTCGTAAACCTAACATTCA+TGG + chr3_1:37869690-37869709 Msa0357120:intron 40.0%
AATGAAGCAGAGACACTTCT+CGG - chr3_1:37869916-37869935 None:intergenic 40.0%
! AGAGGTATGGAAAAAGTTGC+AGG + chr3_1:37870040-37870059 Msa0357120:CDS 40.0%
ATGGAAAAAGTTGCAGGCTT+AGG + chr3_1:37870046-37870065 Msa0357120:CDS 40.0%
ATCATGCTTAGGATCAAGCA+TGG - chr3_1:37870082-37870101 None:intergenic 40.0%
ATCATAGCTCAACAACTTCC+TGG + chr3_1:37870171-37870190 Msa0357120:CDS 40.0%
TCATAGCTCAACAACTTCCT+GGG + chr3_1:37870172-37870191 Msa0357120:CDS 40.0%
AGAAAGGCTTGTGAGTAACA+GGG - chr3_1:37870269-37870288 None:intergenic 40.0%
AAAGCAATTGCCACCCAAAA+TGG + chr3_1:37870389-37870408 Msa0357120:CDS 40.0%
! CTTTTGTCATTGGGATGGTT+TGG - chr3_1:37870440-37870459 None:intergenic 40.0%
CTCTACGAATGAAATGTCTG+AGG - chr3_1:37870709-37870728 None:intergenic 40.0%
CTCAGACATTTCATTCGTAG+AGG + chr3_1:37870707-37870726 Msa0357120:CDS 40.0%
! AAGCTTTCCTGAACTTTTGG+AGG + chr3_1:37870761-37870780 Msa0357120:CDS 40.0%
!! CCATGTTCTGAGGCAAATGA+AGG - chr3_1:37869269-37869288 None:intergenic 45.0%
CCTTCATTTGCCTCAGAACA+TGG + chr3_1:37869266-37869285 Msa0357120:CDS 45.0%
GAAAAAGTTGCAGGCTTAGG+TGG + chr3_1:37870049-37870068 Msa0357120:CDS 45.0%
GTTAAGCTTCATGCAGCCAT+AGG + chr3_1:37870135-37870154 Msa0357120:CDS 45.0%
TTCATGCAGCCATAGGTAGT+AGG + chr3_1:37870142-37870161 Msa0357120:CDS 45.0%
GATAGACCACCTACTACCTA+TGG - chr3_1:37870154-37870173 None:intergenic 45.0%
ACATCATTGTCTGTTCTCCC+AGG - chr3_1:37870192-37870211 None:intergenic 45.0%
GAGAAAGGCTTGTGAGTAAC+AGG - chr3_1:37870270-37870289 None:intergenic 45.0%
TGGGTGGCAATTGCTTTGAT+TGG - chr3_1:37870386-37870405 None:intergenic 45.0%
GATGGTTCCTCCAAAAGTTC+AGG - chr3_1:37870771-37870790 None:intergenic 45.0%
!! CCATGTTCTGAGGCAAATGA+AGG - chr3_1:37869269-37869288 None:intergenic 45.0%
CCTTCATTTGCCTCAGAACA+TGG + chr3_1:37869266-37869285 Msa0357120:CDS 45.0%
GAAAAAGTTGCAGGCTTAGG+TGG + chr3_1:37870049-37870068 Msa0357120:CDS 45.0%
GTTAAGCTTCATGCAGCCAT+AGG + chr3_1:37870135-37870154 Msa0357120:CDS 45.0%
TTCATGCAGCCATAGGTAGT+AGG + chr3_1:37870142-37870161 Msa0357120:CDS 45.0%
GATAGACCACCTACTACCTA+TGG - chr3_1:37870154-37870173 None:intergenic 45.0%
ACATCATTGTCTGTTCTCCC+AGG - chr3_1:37870192-37870211 None:intergenic 45.0%
GAGAAAGGCTTGTGAGTAAC+AGG - chr3_1:37870270-37870289 None:intergenic 45.0%
TGGGTGGCAATTGCTTTGAT+TGG - chr3_1:37870386-37870405 None:intergenic 45.0%
GATGGTTCCTCCAAAAGTTC+AGG - chr3_1:37870771-37870790 None:intergenic 45.0%
TGCCGTTCAAAAAGGCCTAG+CGG - chr3_1:37869662-37869681 None:intergenic 50.0%
GATTAGGCGTCTCTCAGTGT+CGG - chr3_1:37869894-37869913 None:intergenic 50.0%
GCAGAGACACTTCTCGGATT+AGG - chr3_1:37869910-37869929 None:intergenic 50.0%
ATGCAGCCATAGGTAGTAGG+TGG + chr3_1:37870145-37870164 Msa0357120:CDS 50.0%
! CTGAGGATGATGACGAGACT+TGG - chr3_1:37870692-37870711 None:intergenic 50.0%
TGCCGTTCAAAAAGGCCTAG+CGG - chr3_1:37869662-37869681 None:intergenic 50.0%
GATTAGGCGTCTCTCAGTGT+CGG - chr3_1:37869894-37869913 None:intergenic 50.0%
GCAGAGACACTTCTCGGATT+AGG - chr3_1:37869910-37869929 None:intergenic 50.0%
ATGCAGCCATAGGTAGTAGG+TGG + chr3_1:37870145-37870164 Msa0357120:CDS 50.0%
! CTGAGGATGATGACGAGACT+TGG - chr3_1:37870692-37870711 None:intergenic 50.0%
! CGCCGCTAGGCCTTTTTGAA+CGG + chr3_1:37869657-37869676 Msa0357120:intron 55.0%
! CGCCGCTAGGCCTTTTTGAA+CGG + chr3_1:37869657-37869676 Msa0357120:intron 55.0%
CGGACAAAAAGCTCGCCGCT+AGG + chr3_1:37869644-37869663 Msa0357120:intron 60.0%
CACCAGACACGACACAGACG+TGG + chr3_1:37869822-37869841 Msa0357120:intron 60.0%
GTCCACGTCTGTGTCGTGTC+TGG - chr3_1:37869827-37869846 None:intergenic 60.0%
CGGACAAAAAGCTCGCCGCT+AGG + chr3_1:37869644-37869663 Msa0357120:intron 60.0%
CACCAGACACGACACAGACG+TGG + chr3_1:37869822-37869841 Msa0357120:intron 60.0%
GTCCACGTCTGTGTCGTGTC+TGG - chr3_1:37869827-37869846 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 37869191 37870800 37869191 ID=Msa0357120;Name=Msa0357120
chr3_1 mRNA 37869191 37870800 37869191 ID=Msa0357120-mRNA-1;Parent=Msa0357120;Name=Msa0357120-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|299
chr3_1 exon 37869191 37869323 37869191 ID=Msa0357120-mRNA-1:exon:6889;Parent=Msa0357120-mRNA-1
chr3_1 exon 37870034 37870800 37870034 ID=Msa0357120-mRNA-1:exon:6890;Parent=Msa0357120-mRNA-1
chr3_1 CDS 37869191 37869323 37869191 ID=Msa0357120-mRNA-1:cds;Parent=Msa0357120-mRNA-1
chr3_1 CDS 37870034 37870800 37870034 ID=Msa0357120-mRNA-1:cds;Parent=Msa0357120-mRNA-1
Gene Sequence

>Msa0357120

ATGGTGAGGTCTTCAAGTTGTGAAAAAAATAGTGTCATCAAAAGAGGTGTATGGATTGCAGAAGATGCAAAGGCACCTTCATTTGCCTCAGAACATGGATCTGTTAATTTGACTTCTGTCCCTAAAAAAACAGGTGTTAAGAGGTATGGAAAAAGTTGCAGGCTTAGGTGGAGTAACTCCATGCTTGATCCTAAGCATGATGATAAGTTCACATCCCAAGAAGAAGATCTAATCGTTAAGCTTCATGCAGCCATAGGTAGTAGGTGGTCTATCATAGCTCAACAACTTCCTGGGAGAACAGACAATGATGTTAAGAACAATTGGAACACAAAGCTGAAAAAGAAGCTTTCTCAAATGGGGATAGACCCTGTTACTCACAAGCCTTTCTCTAAACTCATTGCTGATTATGGAAATATAGGTGGTGCTAATTGTCATTTTAATCAAGACTTTAGGAATCAAAGATTGATCAGAAACACAAATGACCAATCAAAGCAATTGCCACCCAAAATGGAAACAGTTATGAATCTTTCACAGTTCCAAACCATCCCAATGACAAAAGTAGAAAATGAAACCAGTAATAATAATAATCCAACATCAATGTTTATGGAAGCATTCTTGTCATCATCATCATCACCATTACCTTCAACACAAGAAACAAACTTTTCTGCACCATTTAGTTGGAATGACTTTCTTCTACAAGATGCTTTTTCACAAGATGAACCTACTAATAACCTGCAAGAACAACAAATTTTAGGTGGATTGTTTTCAAAGAAAGAGGTCATGTCACACCAAGTCTCGTCATCATCCTCAGACATTTCATTCGTAGAGGCCATACTCGATCAAGAAAATGAGATGTTTCTAAGCTTTCCTGAACTTTTGGAGGAACCATCCAATTACTAA
Protein sequence

>Msa0357120

MVRSSSCEKNSVIKRGVWIAEDAKAPSFASEHGSVNLTSVPKKTGVKRYGKSCRLRWSNSMLDPKHDDKFTSQEEDLIVKLHAAIGSRWSIIAQQLPGRTDNDVKNNWNTKLKKKLSQMGIDPVTHKPFSKLIADYGNIGGANCHFNQDFRNQRLIRNTNDQSKQLPPKMETVMNLSQFQTIPMTKVENETSNNNNPTSMFMEAFLSSSSSPLPSTQETNFSAPFSWNDFLLQDAFSQDEPTNNLQEQQILGGLFSKKEVMSHQVSSSSSDISFVEAILDQENEMFLSFPELLEEPSNY*