Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360460 | XP_003600003.2 | 82.700 | 237 | 31 | 2 | 19 | 249 | 3 | 235 | 4.26e-140 | 403 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360460 | sp|Q9LT81|C3H39_ARATH | 33.125 | 320 | 113 | 11 | 23 | 245 | 61 | 376 | 1.66e-40 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360460 | G7J1X0 | 82.700 | 237 | 31 | 2 | 19 | 249 | 3 | 235 | 2.03e-140 | 403 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0360460 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360460 | MtrunA17_Chr3g0098251 | 84.746 | 177 | 21 | 1 | 19 | 189 | 3 | 179 | 1.20e-109 | 314 |
| Msa0360460 | MtrunA17_Chr8g0360671 | 90.833 | 120 | 9 | 1 | 71 | 188 | 40 | 159 | 1.70e-78 | 234 |
| Msa0360460 | MtrunA17_Chr4g0063401 | 51.869 | 214 | 69 | 6 | 5 | 184 | 17 | 230 | 6.61e-63 | 197 |
| Msa0360460 | MtrunA17_Chr4g0063361 | 44.889 | 225 | 82 | 5 | 5 | 187 | 17 | 241 | 5.69e-54 | 174 |
| Msa0360460 | MtrunA17_Chr4g0063391 | 42.273 | 220 | 94 | 6 | 3 | 194 | 1 | 215 | 5.37e-48 | 158 |
| Msa0360460 | MtrunA17_Chr4g0063371 | 38.039 | 255 | 117 | 6 | 3 | 241 | 1 | 230 | 2.57e-40 | 139 |
| Msa0360460 | MtrunA17_Chr8g0366501 | 39.683 | 126 | 55 | 3 | 44 | 151 | 86 | 208 | 2.80e-21 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0360460 | AT3G19360.1 | 33.125 | 320 | 113 | 11 | 23 | 245 | 61 | 376 | 1.69e-41 | 146 |
| Msa0360460 | AT3G19360.2 | 33.125 | 320 | 113 | 11 | 23 | 245 | 61 | 376 | 1.69e-41 | 146 |
| Msa0360460 | AT1G32360.1 | 36.719 | 128 | 55 | 3 | 44 | 148 | 85 | 209 | 3.58e-19 | 85.9 |
Find 70 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGAATGGATGCAGTTTC+TGG | 0.186612 | 3_1:-49747459 | Msa0360460:CDS |
| TCCTCTGCACTTGGCTAGTT+GGG | 0.297541 | 3_1:+49745966 | None:intergenic |
| TTCCAGTAAGTGCCCCTTGC+TGG | 0.303703 | 3_1:+49747236 | None:intergenic |
| TTTGCCACACTTAGACTTGC+TGG | 0.314187 | 3_1:+49746092 | None:intergenic |
| GGCTAGTTGGGTAGAATTAG+AGG | 0.330401 | 3_1:+49745978 | None:intergenic |
| CCGCCTGTTTCTTTGTTTGA+TGG | 0.330855 | 3_1:+49747620 | None:intergenic |
| ACCAAATGTCTTGCCAGTTT+CGG | 0.332974 | 3_1:-49746138 | Msa0360460:CDS |
| ATAGGCTTAGGGATGATTCT+TGG | 0.341417 | 3_1:-49747343 | Msa0360460:CDS |
| CTCGTATTTGTCATAAGTTC+AGG | 0.342100 | 3_1:-49747583 | Msa0360460:CDS |
| CTCCTCTGCACTTGGCTAGT+TGG | 0.350321 | 3_1:+49745965 | None:intergenic |
| AGCCAGCAAGGGGCACTTAC+TGG | 0.351537 | 3_1:-49747238 | Msa0360460:CDS |
| TAAGGAAGCCACCGCCGAAT+TGG | 0.369861 | 3_1:-49747505 | Msa0360460:CDS |
| CTAATAGTTTCGAAGGCAAT+AGG | 0.370078 | 3_1:-49747271 | Msa0360460:CDS |
| GCCGAAACTGGCAAGACATT+TGG | 0.372288 | 3_1:+49746137 | None:intergenic |
| GGTGCATCATTGGCCGAAAC+TGG | 0.373504 | 3_1:+49746125 | None:intergenic |
| GGGCACTTACTGGAAGATTA+AGG | 0.404455 | 3_1:-49747228 | Msa0360460:CDS |
| AGACTTGCTGGGATGCTTGT+AGG | 0.406856 | 3_1:+49746104 | None:intergenic |
| TCTTGTTCCTTGAAAATTGA+GGG | 0.407508 | 3_1:+49747693 | None:intergenic |
| CTCTTGTTCCTTGAAAATTG+AGG | 0.430344 | 3_1:+49747692 | None:intergenic |
| ATTTGTCATAAGTTCAGGTT+TGG | 0.439137 | 3_1:-49747578 | Msa0360460:CDS |
| CTTCCATCAAACAAAGAAAC+AGG | 0.444809 | 3_1:-49747623 | Msa0360460:CDS |
| TTGCCACACTTAGACTTGCT+GGG | 0.445723 | 3_1:+49746093 | None:intergenic |
| AGACGAAGTCTTTACTTTGG+TGG | 0.450051 | 3_1:-49746052 | Msa0360460:CDS |
| TCAATACTATATATGCTGAT+TGG | 0.453146 | 3_1:-49746013 | Msa0360460:CDS |
| AATGGTGAGGAATGTCCTTA+TGG | 0.454214 | 3_1:-49747386 | Msa0360460:CDS |
| GTTTCTTTGTTTGATGGAAG+AGG | 0.456265 | 3_1:+49747626 | None:intergenic |
| CACTATGGTCATGGAGAAGC+AGG | 0.459706 | 3_1:-49747200 | Msa0360460:intron |
| AAGATATCGTTGTGGTGGTA+TGG | 0.470997 | 3_1:+49747725 | None:intergenic |
| CTGGCTCTCGCAACGAGGAA+TGG | 0.475242 | 3_1:-49747472 | Msa0360460:CDS |
| CTCACGGGGTTGGTGAGATA+AGG | 0.482058 | 3_1:-49747523 | Msa0360460:CDS |
| AGCTCCTTCCAATTCGGCGG+TGG | 0.483397 | 3_1:+49747497 | None:intergenic |
| CTAAGACGAAGTCTTTACTT+TGG | 0.484791 | 3_1:-49746055 | Msa0360460:CDS |
| TTTCTTTGTTTGATGGAAGA+GGG | 0.487321 | 3_1:+49747627 | None:intergenic |
| GATGCTTGTAGGTGCATCAT+TGG | 0.488672 | 3_1:+49746115 | None:intergenic |
| AAACAACACTTATCACCATA+AGG | 0.495083 | 3_1:+49747371 | None:intergenic |
| TCTAAGTGTGGCAAAGGAAG+TGG | 0.499183 | 3_1:-49746084 | Msa0360460:CDS |
| CAGCAAATCATTCACAAGAT+GGG | 0.499225 | 3_1:-49747428 | Msa0360460:CDS |
| TAGGTGCAATGTTCACCTTT+CGG | 0.499449 | 3_1:+49747548 | None:intergenic |
| CCAGCTAGCTCCTTCCAATT+CGG | 0.500119 | 3_1:+49747491 | None:intergenic |
| AACATTGCACCTATGCTCAC+GGG | 0.505998 | 3_1:-49747538 | Msa0360460:CDS |
| TCAGCAAATCATTCACAAGA+TGG | 0.508010 | 3_1:-49747429 | Msa0360460:CDS |
| TGCACCTATGCTCACGGGGT+TGG | 0.511720 | 3_1:-49747533 | Msa0360460:CDS |
| CCGAATTGGAAGGAGCTAGC+TGG | 0.521647 | 3_1:-49747491 | Msa0360460:CDS |
| AAGATTAAGGACTGTCACTA+TGG | 0.525056 | 3_1:-49747215 | Msa0360460:CDS |
| GTCTGTGAACAAGCCAGCAA+GGG | 0.545575 | 3_1:-49747249 | Msa0360460:CDS |
| ACTTCCAATGCTTAATGCAC+AGG | 0.545801 | 3_1:+49747307 | None:intergenic |
| GATGGTTCTAATAGTTTCGA+AGG | 0.547401 | 3_1:-49747278 | Msa0360460:CDS |
| GGTCTGTGAACAAGCCAGCA+AGG | 0.553295 | 3_1:-49747250 | Msa0360460:CDS |
| AGCAAGTCTAAGTGTGGCAA+AGG | 0.556244 | 3_1:-49746090 | Msa0360460:CDS |
| GAGGCCTGTGCATTAAGCAT+TGG | 0.559524 | 3_1:-49747311 | Msa0360460:CDS |
| AAGAGGGCATATGAATGCAT+TGG | 0.560421 | 3_1:+49747643 | None:intergenic |
| AGGTTTGGTAATTGTCCGAA+AGG | 0.564006 | 3_1:-49747563 | Msa0360460:CDS |
| GCATTAAGCATTGGAAGTAT+CGG | 0.572339 | 3_1:-49747302 | Msa0360460:CDS |
| AAGGACTGTCACTATGGTCA+TGG | 0.572929 | 3_1:-49747209 | Msa0360460:CDS |
| GAACATTGCACCTATGCTCA+CGG | 0.573304 | 3_1:-49747539 | Msa0360460:CDS |
| GAAGCCACCGCCGAATTGGA+AGG | 0.582073 | 3_1:-49747501 | Msa0360460:CDS |
| AGCATTGGAAGTATCGGAGA+TGG | 0.590771 | 3_1:-49747296 | Msa0360460:CDS |
| CTCACCAACCCCGTGAGCAT+AGG | 0.599473 | 3_1:+49747529 | None:intergenic |
| AGCAAATCATTCACAAGATG+GGG | 0.600236 | 3_1:-49747427 | Msa0360460:CDS |
| TTTCAAAGATATCGTTGTGG+TGG | 0.607400 | 3_1:+49747720 | None:intergenic |
| GCTAGCTCCTTCCAATTCGG+CGG | 0.629242 | 3_1:+49747494 | None:intergenic |
| CATCCCAGCAAGTCTAAGTG+TGG | 0.664369 | 3_1:-49746096 | Msa0360460:CDS |
| CAAGAAATACTACAATGGTG+AGG | 0.666991 | 3_1:-49747399 | Msa0360460:CDS |
| TCTGTGAACAAGCCAGCAAG+GGG | 0.667598 | 3_1:-49747248 | Msa0360460:CDS |
| CTATGCAAGAAATACTACAA+TGG | 0.669884 | 3_1:-49747404 | Msa0360460:CDS |
| TGATTCTTGGAAATCAAGAG+AGG | 0.676002 | 3_1:-49747330 | Msa0360460:CDS |
| CCATCAAACAAAGAAACAGG+CGG | 0.683642 | 3_1:-49747620 | Msa0360460:CDS |
| TCGTTTCAAAGATATCGTTG+TGG | 0.683730 | 3_1:+49747717 | None:intergenic |
| ACATTGCACCTATGCTCACG+GGG | 0.692970 | 3_1:-49747537 | Msa0360460:CDS |
| GCTAGCTGGCTCTCGCAACG+AGG | 0.719790 | 3_1:-49747477 | Msa0360460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACAATATTTTATACTAGATA+GGG | - | chr3_1:49747153-49747172 | Msa0360460:intron | 15.0% |
| !!! | ACAATATTTTATACTAGATA+GGG | - | chr3_1:49747153-49747172 | Msa0360460:intron | 15.0% |
| !!! | ATAATTCTACTGTTTTGTTT+TGG | - | chr3_1:49746575-49746594 | Msa0360460:intron | 20.0% |
| !! | TATAAAATATTGTGAAACAG+CGG | + | chr3_1:49747146-49747165 | None:intergenic | 20.0% |
| !!! | CACAATATTTTATACTAGAT+AGG | - | chr3_1:49747152-49747171 | Msa0360460:intron | 20.0% |
| !! | TTATAACAATCAAATCTGTT+TGG | - | chr3_1:49747522-49747541 | Msa0360460:CDS | 20.0% |
| !!! | ATAATTCTACTGTTTTGTTT+TGG | - | chr3_1:49746575-49746594 | Msa0360460:intron | 20.0% |
| !! | TATAAAATATTGTGAAACAG+CGG | + | chr3_1:49747146-49747165 | None:intergenic | 20.0% |
| !!! | CACAATATTTTATACTAGAT+AGG | - | chr3_1:49747152-49747171 | Msa0360460:intron | 20.0% |
| !! | TTATAACAATCAAATCTGTT+TGG | - | chr3_1:49747522-49747541 | Msa0360460:CDS | 20.0% |
| !! | TGATTGTTTTCAGAAATTCT+TGG | + | chr3_1:49746055-49746074 | None:intergenic | 25.0% |
| !!! | ATAAGTGTTGTTTTCTTCAT+AGG | - | chr3_1:49746359-49746378 | Msa0360460:intron | 25.0% |
| !! | GGTAATGATAATAATGGTTT+TGG | - | chr3_1:49746541-49746560 | Msa0360460:intron | 25.0% |
| ! | TTATACTAGATAGGGTATAA+TGG | - | chr3_1:49747161-49747180 | Msa0360460:intron | 25.0% |
| ! | TCAATACTATATATGCTGAT+TGG | - | chr3_1:49747707-49747726 | Msa0360460:CDS | 25.0% |
| !! | TGATTGTTTTCAGAAATTCT+TGG | + | chr3_1:49746055-49746074 | None:intergenic | 25.0% |
| !!! | ATAAGTGTTGTTTTCTTCAT+AGG | - | chr3_1:49746359-49746378 | Msa0360460:intron | 25.0% |
| !! | GGTAATGATAATAATGGTTT+TGG | - | chr3_1:49746541-49746560 | Msa0360460:intron | 25.0% |
| ! | TTATACTAGATAGGGTATAA+TGG | - | chr3_1:49747161-49747180 | Msa0360460:intron | 25.0% |
| ! | TCAATACTATATATGCTGAT+TGG | - | chr3_1:49747707-49747726 | Msa0360460:CDS | 25.0% |
| TCTTGTTCCTTGAAAATTGA+GGG | + | chr3_1:49746030-49746049 | None:intergenic | 30.0% | |
| ! | TTTCTTTGTTTGATGGAAGA+GGG | + | chr3_1:49746096-49746115 | None:intergenic | 30.0% |
| ! | ATTTGTCATAAGTTCAGGTT+TGG | - | chr3_1:49746142-49746161 | Msa0360460:CDS | 30.0% |
| CTATGCAAGAAATACTACAA+TGG | - | chr3_1:49746316-49746335 | Msa0360460:intron | 30.0% | |
| AAACAACACTTATCACCATA+AGG | + | chr3_1:49746352-49746371 | None:intergenic | 30.0% | |
| ! | TTGTTTTCTTCATAGGCTTA+GGG | - | chr3_1:49746366-49746385 | Msa0360460:intron | 30.0% |
| GAAGCAGGTAATGATAATAA+TGG | - | chr3_1:49746535-49746554 | Msa0360460:intron | 30.0% | |
| ! | GTGTGTGATATTTTCATGTT+TGG | - | chr3_1:49746709-49746728 | Msa0360460:intron | 30.0% |
| AGAATATGATCAACTACCTT+AGG | + | chr3_1:49746757-49746776 | None:intergenic | 30.0% | |
| !! | TCATATTCTGAAAGAGCATT+TGG | - | chr3_1:49746768-49746787 | Msa0360460:intron | 30.0% |
| CTGTTTCAGTTTAAAAGCAA+TGG | - | chr3_1:49746813-49746832 | Msa0360460:intron | 30.0% | |
| TTGTTAAATTGTCGCCATAA+CGG | - | chr3_1:49746876-49746895 | Msa0360460:intron | 30.0% | |
| TGTCTGATTCATCAATAAGT+TGG | - | chr3_1:49747266-49747285 | Msa0360460:CDS | 30.0% | |
| TCTTGTTCCTTGAAAATTGA+GGG | + | chr3_1:49746030-49746049 | None:intergenic | 30.0% | |
| ! | TTTCTTTGTTTGATGGAAGA+GGG | + | chr3_1:49746096-49746115 | None:intergenic | 30.0% |
| ! | ATTTGTCATAAGTTCAGGTT+TGG | - | chr3_1:49746142-49746161 | Msa0360460:CDS | 30.0% |
| CTATGCAAGAAATACTACAA+TGG | - | chr3_1:49746316-49746335 | Msa0360460:intron | 30.0% | |
| AAACAACACTTATCACCATA+AGG | + | chr3_1:49746352-49746371 | None:intergenic | 30.0% | |
| ! | TTGTTTTCTTCATAGGCTTA+GGG | - | chr3_1:49746366-49746385 | Msa0360460:intron | 30.0% |
| GAAGCAGGTAATGATAATAA+TGG | - | chr3_1:49746535-49746554 | Msa0360460:intron | 30.0% | |
| ! | GTGTGTGATATTTTCATGTT+TGG | - | chr3_1:49746709-49746728 | Msa0360460:intron | 30.0% |
| AGAATATGATCAACTACCTT+AGG | + | chr3_1:49746757-49746776 | None:intergenic | 30.0% | |
| !! | TCATATTCTGAAAGAGCATT+TGG | - | chr3_1:49746768-49746787 | Msa0360460:intron | 30.0% |
| CTGTTTCAGTTTAAAAGCAA+TGG | - | chr3_1:49746813-49746832 | Msa0360460:intron | 30.0% | |
| TTGTTAAATTGTCGCCATAA+CGG | - | chr3_1:49746876-49746895 | Msa0360460:intron | 30.0% | |
| TGTCTGATTCATCAATAAGT+TGG | - | chr3_1:49747266-49747285 | Msa0360460:CDS | 30.0% | |
| TTTCAAAGATATCGTTGTGG+TGG | + | chr3_1:49746003-49746022 | None:intergenic | 35.0% | |
| TCGTTTCAAAGATATCGTTG+TGG | + | chr3_1:49746006-49746025 | None:intergenic | 35.0% | |
| CTCTTGTTCCTTGAAAATTG+AGG | + | chr3_1:49746031-49746050 | None:intergenic | 35.0% | |
| !! | CTCAATTTTCAAGGAACAAG+AGG | - | chr3_1:49746029-49746048 | Msa0360460:CDS | 35.0% |
| ! | GTTTCTTTGTTTGATGGAAG+AGG | + | chr3_1:49746097-49746116 | None:intergenic | 35.0% |
| CTTCCATCAAACAAAGAAAC+AGG | - | chr3_1:49746097-49746116 | Msa0360460:CDS | 35.0% | |
| CTCGTATTTGTCATAAGTTC+AGG | - | chr3_1:49746137-49746156 | Msa0360460:CDS | 35.0% | |
| TCAGCAAATCATTCACAAGA+TGG | - | chr3_1:49746291-49746310 | Msa0360460:intron | 35.0% | |
| CAGCAAATCATTCACAAGAT+GGG | - | chr3_1:49746292-49746311 | Msa0360460:intron | 35.0% | |
| AGCAAATCATTCACAAGATG+GGG | - | chr3_1:49746293-49746312 | Msa0360460:intron | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | - | chr3_1:49746321-49746340 | Msa0360460:intron | 35.0% | |
| !! | GTTGTTTTCTTCATAGGCTT+AGG | - | chr3_1:49746365-49746384 | Msa0360460:intron | 35.0% |
| TGATTCTTGGAAATCAAGAG+AGG | - | chr3_1:49746390-49746409 | Msa0360460:intron | 35.0% | |
| !! | GCATTAAGCATTGGAAGTAT+CGG | - | chr3_1:49746418-49746437 | Msa0360460:intron | 35.0% |
| !! | GATGGTTCTAATAGTTTCGA+AGG | - | chr3_1:49746442-49746461 | Msa0360460:intron | 35.0% |
| CTAATAGTTTCGAAGGCAAT+AGG | - | chr3_1:49746449-49746468 | Msa0360460:intron | 35.0% | |
| AAGATTAAGGACTGTCACTA+TGG | - | chr3_1:49746505-49746524 | Msa0360460:intron | 35.0% | |
| TATGATCAACTACCTTAGGA+GGG | + | chr3_1:49746753-49746772 | None:intergenic | 35.0% | |
| ATATGATCAACTACCTTAGG+AGG | + | chr3_1:49746754-49746773 | None:intergenic | 35.0% | |
| GCTACAATGGCTATTATATC+CGG | - | chr3_1:49746936-49746955 | Msa0360460:intron | 35.0% | |
| TGTTATCATAAGTGGAAGGA+AGG | + | chr3_1:49747024-49747043 | None:intergenic | 35.0% | |
| TGACAACAGTATGTAAACCT+CGG | + | chr3_1:49747056-49747075 | None:intergenic | 35.0% | |
| GCAATAGAATTGTTGTGTAG+CGG | + | chr3_1:49747115-49747134 | None:intergenic | 35.0% | |
| AAAAACCAAGAGGAGAAACA+GGG | + | chr3_1:49747225-49747244 | None:intergenic | 35.0% | |
| AATCATCAGCAAAAACCAAG+AGG | + | chr3_1:49747235-49747254 | None:intergenic | 35.0% | |
| ! | CTGATTCATCAATAAGTTGG+AGG | - | chr3_1:49747269-49747288 | Msa0360460:CDS | 35.0% |
| TATGTTTGACTGCAACGTTA+CGG | + | chr3_1:49747339-49747358 | None:intergenic | 35.0% | |
| !! | TAACATTTTAGCCACAATCG+TGG | - | chr3_1:49747402-49747421 | Msa0360460:CDS | 35.0% |
| AAGAGTCAGAAGAAGATACA+AGG | + | chr3_1:49747551-49747570 | None:intergenic | 35.0% | |
| CTAAGACGAAGTCTTTACTT+TGG | - | chr3_1:49747665-49747684 | Msa0360460:CDS | 35.0% | |
| TTTCAAAGATATCGTTGTGG+TGG | + | chr3_1:49746003-49746022 | None:intergenic | 35.0% | |
| TCGTTTCAAAGATATCGTTG+TGG | + | chr3_1:49746006-49746025 | None:intergenic | 35.0% | |
| CTCTTGTTCCTTGAAAATTG+AGG | + | chr3_1:49746031-49746050 | None:intergenic | 35.0% | |
| !! | CTCAATTTTCAAGGAACAAG+AGG | - | chr3_1:49746029-49746048 | Msa0360460:CDS | 35.0% |
| ! | GTTTCTTTGTTTGATGGAAG+AGG | + | chr3_1:49746097-49746116 | None:intergenic | 35.0% |
| CTTCCATCAAACAAAGAAAC+AGG | - | chr3_1:49746097-49746116 | Msa0360460:CDS | 35.0% | |
| CTCGTATTTGTCATAAGTTC+AGG | - | chr3_1:49746137-49746156 | Msa0360460:CDS | 35.0% | |
| TCAGCAAATCATTCACAAGA+TGG | - | chr3_1:49746291-49746310 | Msa0360460:intron | 35.0% | |
| CAGCAAATCATTCACAAGAT+GGG | - | chr3_1:49746292-49746311 | Msa0360460:intron | 35.0% | |
| AGCAAATCATTCACAAGATG+GGG | - | chr3_1:49746293-49746312 | Msa0360460:intron | 35.0% | |
| CAAGAAATACTACAATGGTG+AGG | - | chr3_1:49746321-49746340 | Msa0360460:intron | 35.0% | |
| !! | GTTGTTTTCTTCATAGGCTT+AGG | - | chr3_1:49746365-49746384 | Msa0360460:intron | 35.0% |
| TGATTCTTGGAAATCAAGAG+AGG | - | chr3_1:49746390-49746409 | Msa0360460:intron | 35.0% | |
| !! | GCATTAAGCATTGGAAGTAT+CGG | - | chr3_1:49746418-49746437 | Msa0360460:intron | 35.0% |
| !! | GATGGTTCTAATAGTTTCGA+AGG | - | chr3_1:49746442-49746461 | Msa0360460:intron | 35.0% |
| CTAATAGTTTCGAAGGCAAT+AGG | - | chr3_1:49746449-49746468 | Msa0360460:intron | 35.0% | |
| AAGATTAAGGACTGTCACTA+TGG | - | chr3_1:49746505-49746524 | Msa0360460:intron | 35.0% | |
| TATGATCAACTACCTTAGGA+GGG | + | chr3_1:49746753-49746772 | None:intergenic | 35.0% | |
| ATATGATCAACTACCTTAGG+AGG | + | chr3_1:49746754-49746773 | None:intergenic | 35.0% | |
| GCTACAATGGCTATTATATC+CGG | - | chr3_1:49746936-49746955 | Msa0360460:intron | 35.0% | |
| TGTTATCATAAGTGGAAGGA+AGG | + | chr3_1:49747024-49747043 | None:intergenic | 35.0% | |
| TGACAACAGTATGTAAACCT+CGG | + | chr3_1:49747056-49747075 | None:intergenic | 35.0% | |
| GCAATAGAATTGTTGTGTAG+CGG | + | chr3_1:49747115-49747134 | None:intergenic | 35.0% | |
| AAAAACCAAGAGGAGAAACA+GGG | + | chr3_1:49747225-49747244 | None:intergenic | 35.0% | |
| AATCATCAGCAAAAACCAAG+AGG | + | chr3_1:49747235-49747254 | None:intergenic | 35.0% | |
| ! | CTGATTCATCAATAAGTTGG+AGG | - | chr3_1:49747269-49747288 | Msa0360460:CDS | 35.0% |
| TATGTTTGACTGCAACGTTA+CGG | + | chr3_1:49747339-49747358 | None:intergenic | 35.0% | |
| !! | TAACATTTTAGCCACAATCG+TGG | - | chr3_1:49747402-49747421 | Msa0360460:CDS | 35.0% |
| AAGAGTCAGAAGAAGATACA+AGG | + | chr3_1:49747551-49747570 | None:intergenic | 35.0% | |
| CTAAGACGAAGTCTTTACTT+TGG | - | chr3_1:49747665-49747684 | Msa0360460:CDS | 35.0% | |
| AAGATATCGTTGTGGTGGTA+TGG | + | chr3_1:49745998-49746017 | None:intergenic | 40.0% | |
| ! | AAACGAGCCCTCAATTTTCA+AGG | - | chr3_1:49746020-49746039 | Msa0360460:CDS | 40.0% |
| ! | AAGAGGGCATATGAATGCAT+TGG | + | chr3_1:49746080-49746099 | None:intergenic | 40.0% |
| CCATCAAACAAAGAAACAGG+CGG | - | chr3_1:49746100-49746119 | Msa0360460:CDS | 40.0% | |
| ! | AGGTTTGGTAATTGTCCGAA+AGG | - | chr3_1:49746157-49746176 | Msa0360460:intron | 40.0% |
| TAGGTGCAATGTTCACCTTT+CGG | + | chr3_1:49746175-49746194 | None:intergenic | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | - | chr3_1:49746334-49746353 | Msa0360460:intron | 40.0% | |
| ATAGGCTTAGGGATGATTCT+TGG | - | chr3_1:49746377-49746396 | Msa0360460:intron | 40.0% | |
| ACTTCCAATGCTTAATGCAC+AGG | + | chr3_1:49746416-49746435 | None:intergenic | 40.0% | |
| ATGATCAACTACCTTAGGAG+GGG | + | chr3_1:49746752-49746771 | None:intergenic | 40.0% | |
| ATAGCCATTGTAGCCTATAC+CGG | + | chr3_1:49746930-49746949 | None:intergenic | 40.0% | |
| AAAAATCTGGCACACAAGCA+TGG | + | chr3_1:49746986-49747005 | None:intergenic | 40.0% | |
| ! | ATGCTTGTGTGCCAGATTTT+TGG | - | chr3_1:49746985-49747004 | Msa0360460:intron | 40.0% |
| CATAAGTGGAAGGAAGGTTA+TGG | + | chr3_1:49747018-49747037 | None:intergenic | 40.0% | |
| GCAGTGTTATCATAAGTGGA+AGG | + | chr3_1:49747028-49747047 | None:intergenic | 40.0% | |
| CAGAGCAGTGTTATCATAAG+TGG | + | chr3_1:49747032-49747051 | None:intergenic | 40.0% | |
| CTGTTGTCAATTGTAGATCG+CGG | - | chr3_1:49747067-49747086 | Msa0360460:intron | 40.0% | |
| CAAAAACCAAGAGGAGAAAC+AGG | + | chr3_1:49747226-49747245 | None:intergenic | 40.0% | |
| GAGGTTCATTTCTCATTGCA+AGG | - | chr3_1:49747288-49747307 | Msa0360460:CDS | 40.0% | |
| TAATGCAACTGCAGTTGTGA+TGG | - | chr3_1:49747361-49747380 | Msa0360460:CDS | 40.0% | |
| AACATTTGCAACCACGATTG+TGG | + | chr3_1:49747416-49747435 | None:intergenic | 40.0% | |
| ACCAAATGTCTTGCCAGTTT+CGG | - | chr3_1:49747582-49747601 | Msa0360460:CDS | 40.0% | |
| AGACGAAGTCTTTACTTTGG+TGG | - | chr3_1:49747668-49747687 | Msa0360460:CDS | 40.0% | |
| AAGATATCGTTGTGGTGGTA+TGG | + | chr3_1:49745998-49746017 | None:intergenic | 40.0% | |
| ! | AAACGAGCCCTCAATTTTCA+AGG | - | chr3_1:49746020-49746039 | Msa0360460:CDS | 40.0% |
| ! | AAGAGGGCATATGAATGCAT+TGG | + | chr3_1:49746080-49746099 | None:intergenic | 40.0% |
| CCATCAAACAAAGAAACAGG+CGG | - | chr3_1:49746100-49746119 | Msa0360460:CDS | 40.0% | |
| ! | AGGTTTGGTAATTGTCCGAA+AGG | - | chr3_1:49746157-49746176 | Msa0360460:intron | 40.0% |
| TAGGTGCAATGTTCACCTTT+CGG | + | chr3_1:49746175-49746194 | None:intergenic | 40.0% | |
| AATGGTGAGGAATGTCCTTA+TGG | - | chr3_1:49746334-49746353 | Msa0360460:intron | 40.0% | |
| ATAGGCTTAGGGATGATTCT+TGG | - | chr3_1:49746377-49746396 | Msa0360460:intron | 40.0% | |
| ACTTCCAATGCTTAATGCAC+AGG | + | chr3_1:49746416-49746435 | None:intergenic | 40.0% | |
| ATGATCAACTACCTTAGGAG+GGG | + | chr3_1:49746752-49746771 | None:intergenic | 40.0% | |
| ATAGCCATTGTAGCCTATAC+CGG | + | chr3_1:49746930-49746949 | None:intergenic | 40.0% | |
| AAAAATCTGGCACACAAGCA+TGG | + | chr3_1:49746986-49747005 | None:intergenic | 40.0% | |
| ! | ATGCTTGTGTGCCAGATTTT+TGG | - | chr3_1:49746985-49747004 | Msa0360460:intron | 40.0% |
| CATAAGTGGAAGGAAGGTTA+TGG | + | chr3_1:49747018-49747037 | None:intergenic | 40.0% | |
| GCAGTGTTATCATAAGTGGA+AGG | + | chr3_1:49747028-49747047 | None:intergenic | 40.0% | |
| CAGAGCAGTGTTATCATAAG+TGG | + | chr3_1:49747032-49747051 | None:intergenic | 40.0% | |
| CTGTTGTCAATTGTAGATCG+CGG | - | chr3_1:49747067-49747086 | Msa0360460:intron | 40.0% | |
| CAAAAACCAAGAGGAGAAAC+AGG | + | chr3_1:49747226-49747245 | None:intergenic | 40.0% | |
| GAGGTTCATTTCTCATTGCA+AGG | - | chr3_1:49747288-49747307 | Msa0360460:CDS | 40.0% | |
| TAATGCAACTGCAGTTGTGA+TGG | - | chr3_1:49747361-49747380 | Msa0360460:CDS | 40.0% | |
| AACATTTGCAACCACGATTG+TGG | + | chr3_1:49747416-49747435 | None:intergenic | 40.0% | |
| ACCAAATGTCTTGCCAGTTT+CGG | - | chr3_1:49747582-49747601 | Msa0360460:CDS | 40.0% | |
| AGACGAAGTCTTTACTTTGG+TGG | - | chr3_1:49747668-49747687 | Msa0360460:CDS | 40.0% | |
| ! | CCGCCTGTTTCTTTGTTTGA+TGG | + | chr3_1:49746103-49746122 | None:intergenic | 45.0% |
| GAACATTGCACCTATGCTCA+CGG | - | chr3_1:49746181-49746200 | Msa0360460:intron | 45.0% | |
| AACATTGCACCTATGCTCAC+GGG | - | chr3_1:49746182-49746201 | Msa0360460:intron | 45.0% | |
| !! | AGCATTGGAAGTATCGGAGA+TGG | - | chr3_1:49746424-49746443 | Msa0360460:intron | 45.0% |
| GGGCACTTACTGGAAGATTA+AGG | - | chr3_1:49746492-49746511 | Msa0360460:intron | 45.0% | |
| AAGGACTGTCACTATGGTCA+TGG | - | chr3_1:49746511-49746530 | Msa0360460:intron | 45.0% | |
| ATGGCAGCTAGCCAAAAATC+TGG | + | chr3_1:49746999-49747018 | None:intergenic | 45.0% | |
| GTTATCACACGAAAACGAGC+AGG | + | chr3_1:49747449-49747468 | None:intergenic | 45.0% | |
| GATGCTTGTAGGTGCATCAT+TGG | + | chr3_1:49747608-49747627 | None:intergenic | 45.0% | |
| ! | TTGCCACACTTAGACTTGCT+GGG | + | chr3_1:49747630-49747649 | None:intergenic | 45.0% |
| TTTGCCACACTTAGACTTGC+TGG | + | chr3_1:49747631-49747650 | None:intergenic | 45.0% | |
| AGCAAGTCTAAGTGTGGCAA+AGG | - | chr3_1:49747630-49747649 | Msa0360460:CDS | 45.0% | |
| TCTAAGTGTGGCAAAGGAAG+TGG | - | chr3_1:49747636-49747655 | Msa0360460:CDS | 45.0% | |
| ! | CCGCCTGTTTCTTTGTTTGA+TGG | + | chr3_1:49746103-49746122 | None:intergenic | 45.0% |
| GAACATTGCACCTATGCTCA+CGG | - | chr3_1:49746181-49746200 | Msa0360460:intron | 45.0% | |
| AACATTGCACCTATGCTCAC+GGG | - | chr3_1:49746182-49746201 | Msa0360460:intron | 45.0% | |
| !! | AGCATTGGAAGTATCGGAGA+TGG | - | chr3_1:49746424-49746443 | Msa0360460:intron | 45.0% |
| GGGCACTTACTGGAAGATTA+AGG | - | chr3_1:49746492-49746511 | Msa0360460:intron | 45.0% | |
| AAGGACTGTCACTATGGTCA+TGG | - | chr3_1:49746511-49746530 | Msa0360460:intron | 45.0% | |
| ATGGCAGCTAGCCAAAAATC+TGG | + | chr3_1:49746999-49747018 | None:intergenic | 45.0% | |
| GTTATCACACGAAAACGAGC+AGG | + | chr3_1:49747449-49747468 | None:intergenic | 45.0% | |
| GATGCTTGTAGGTGCATCAT+TGG | + | chr3_1:49747608-49747627 | None:intergenic | 45.0% | |
| ! | TTGCCACACTTAGACTTGCT+GGG | + | chr3_1:49747630-49747649 | None:intergenic | 45.0% |
| TTTGCCACACTTAGACTTGC+TGG | + | chr3_1:49747631-49747650 | None:intergenic | 45.0% | |
| AGCAAGTCTAAGTGTGGCAA+AGG | - | chr3_1:49747630-49747649 | Msa0360460:CDS | 45.0% | |
| TCTAAGTGTGGCAAAGGAAG+TGG | - | chr3_1:49747636-49747655 | Msa0360460:CDS | 45.0% | |
| ACATTGCACCTATGCTCACG+GGG | - | chr3_1:49746183-49746202 | Msa0360460:intron | 50.0% | |
| CCAGCTAGCTCCTTCCAATT+CGG | + | chr3_1:49746232-49746251 | None:intergenic | 50.0% | |
| CGAGGAATGGATGCAGTTTC+TGG | - | chr3_1:49746261-49746280 | Msa0360460:intron | 50.0% | |
| GAGGCCTGTGCATTAAGCAT+TGG | - | chr3_1:49746409-49746428 | Msa0360460:intron | 50.0% | |
| GTCTGTGAACAAGCCAGCAA+GGG | - | chr3_1:49746471-49746490 | Msa0360460:intron | 50.0% | |
| TCTGTGAACAAGCCAGCAAG+GGG | - | chr3_1:49746472-49746491 | Msa0360460:intron | 50.0% | |
| CACTATGGTCATGGAGAAGC+AGG | - | chr3_1:49746520-49746539 | Msa0360460:intron | 50.0% | |
| ACATAAACTCGCCCCTCCTA+AGG | - | chr3_1:49746738-49746757 | Msa0360460:intron | 50.0% | |
| GCACAAAATCCTCCATGCCT+TGG | + | chr3_1:49746904-49746923 | None:intergenic | 50.0% | |
| ! | ATGGAGGATTTTGTGCCAGC+CGG | - | chr3_1:49746908-49746927 | Msa0360460:intron | 50.0% |
| ! | GATTTTGTGCCAGCCGGTAT+AGG | - | chr3_1:49746914-49746933 | Msa0360460:intron | 50.0% |
| ! | ATCCGGCATGTTTCTGCCAT+AGG | - | chr3_1:49746953-49746972 | Msa0360460:intron | 50.0% |
| TGATAACACTGCTCTGTCCG+AGG | - | chr3_1:49747036-49747055 | Msa0360460:intron | 50.0% | |
| ! | TTCCACCCTGTTTCTCCTCT+TGG | - | chr3_1:49747217-49747236 | Msa0360460:CDS | 50.0% |
| AACCAAGAGGAGAAACAGGG+TGG | + | chr3_1:49747222-49747241 | None:intergenic | 50.0% | |
| TGCAACTGCAGTTGTGATGG+CGG | - | chr3_1:49747364-49747383 | Msa0360460:CDS | 50.0% | |
| GCCGAAACTGGCAAGACATT+TGG | + | chr3_1:49747586-49747605 | None:intergenic | 50.0% | |
| !! | AGACTTGCTGGGATGCTTGT+AGG | + | chr3_1:49747619-49747638 | None:intergenic | 50.0% |
| CATCCCAGCAAGTCTAAGTG+TGG | - | chr3_1:49747624-49747643 | Msa0360460:CDS | 50.0% | |
| ACATTGCACCTATGCTCACG+GGG | - | chr3_1:49746183-49746202 | Msa0360460:intron | 50.0% | |
| CCAGCTAGCTCCTTCCAATT+CGG | + | chr3_1:49746232-49746251 | None:intergenic | 50.0% | |
| CGAGGAATGGATGCAGTTTC+TGG | - | chr3_1:49746261-49746280 | Msa0360460:intron | 50.0% | |
| GAGGCCTGTGCATTAAGCAT+TGG | - | chr3_1:49746409-49746428 | Msa0360460:intron | 50.0% | |
| GTCTGTGAACAAGCCAGCAA+GGG | - | chr3_1:49746471-49746490 | Msa0360460:intron | 50.0% | |
| TCTGTGAACAAGCCAGCAAG+GGG | - | chr3_1:49746472-49746491 | Msa0360460:intron | 50.0% | |
| CACTATGGTCATGGAGAAGC+AGG | - | chr3_1:49746520-49746539 | Msa0360460:intron | 50.0% | |
| ACATAAACTCGCCCCTCCTA+AGG | - | chr3_1:49746738-49746757 | Msa0360460:intron | 50.0% | |
| GCACAAAATCCTCCATGCCT+TGG | + | chr3_1:49746904-49746923 | None:intergenic | 50.0% | |
| ! | ATGGAGGATTTTGTGCCAGC+CGG | - | chr3_1:49746908-49746927 | Msa0360460:intron | 50.0% |
| ! | GATTTTGTGCCAGCCGGTAT+AGG | - | chr3_1:49746914-49746933 | Msa0360460:intron | 50.0% |
| ! | ATCCGGCATGTTTCTGCCAT+AGG | - | chr3_1:49746953-49746972 | Msa0360460:intron | 50.0% |
| TGATAACACTGCTCTGTCCG+AGG | - | chr3_1:49747036-49747055 | Msa0360460:intron | 50.0% | |
| ! | TTCCACCCTGTTTCTCCTCT+TGG | - | chr3_1:49747217-49747236 | Msa0360460:CDS | 50.0% |
| AACCAAGAGGAGAAACAGGG+TGG | + | chr3_1:49747222-49747241 | None:intergenic | 50.0% | |
| TGCAACTGCAGTTGTGATGG+CGG | - | chr3_1:49747364-49747383 | Msa0360460:CDS | 50.0% | |
| GCCGAAACTGGCAAGACATT+TGG | + | chr3_1:49747586-49747605 | None:intergenic | 50.0% | |
| !! | AGACTTGCTGGGATGCTTGT+AGG | + | chr3_1:49747619-49747638 | None:intergenic | 50.0% |
| CATCCCAGCAAGTCTAAGTG+TGG | - | chr3_1:49747624-49747643 | Msa0360460:CDS | 50.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | - | chr3_1:49746197-49746216 | Msa0360460:intron | 55.0% |
| TAAGGAAGCCACCGCCGAAT+TGG | - | chr3_1:49746215-49746234 | Msa0360460:intron | 55.0% | |
| GCTAGCTCCTTCCAATTCGG+CGG | + | chr3_1:49746229-49746248 | None:intergenic | 55.0% | |
| CCGAATTGGAAGGAGCTAGC+TGG | - | chr3_1:49746229-49746248 | Msa0360460:intron | 55.0% | |
| GGTCTGTGAACAAGCCAGCA+AGG | - | chr3_1:49746470-49746489 | Msa0360460:intron | 55.0% | |
| TTCCAGTAAGTGCCCCTTGC+TGG | + | chr3_1:49746487-49746506 | None:intergenic | 55.0% | |
| TTGTCGCCATAACGGCACCA+AGG | - | chr3_1:49746884-49746903 | Msa0360460:intron | 55.0% | |
| !! | TCCATGCCTTGGTGCCGTTA+TGG | + | chr3_1:49746893-49746912 | None:intergenic | 55.0% |
| ATAACGGCACCAAGGCATGG+AGG | - | chr3_1:49746892-49746911 | Msa0360460:intron | 55.0% | |
| CCATTGTAGCCTATACCGGC+TGG | + | chr3_1:49746926-49746945 | None:intergenic | 55.0% | |
| CCAGCCGGTATAGGCTACAA+TGG | - | chr3_1:49746923-49746942 | Msa0360460:intron | 55.0% | |
| GGCCTATGGCAGAAACATGC+CGG | + | chr3_1:49746958-49746977 | None:intergenic | 55.0% | |
| ! | CAAGCATGGACTGTGGCCTA+TGG | + | chr3_1:49746972-49746991 | None:intergenic | 55.0% |
| ! | TGGCACACAAGCATGGACTG+TGG | + | chr3_1:49746979-49746998 | None:intergenic | 55.0% |
| GGTGCATCATTGGCCGAAAC+TGG | + | chr3_1:49747598-49747617 | None:intergenic | 55.0% | |
| !! | CTCACGGGGTTGGTGAGATA+AGG | - | chr3_1:49746197-49746216 | Msa0360460:intron | 55.0% |
| TAAGGAAGCCACCGCCGAAT+TGG | - | chr3_1:49746215-49746234 | Msa0360460:intron | 55.0% | |
| GCTAGCTCCTTCCAATTCGG+CGG | + | chr3_1:49746229-49746248 | None:intergenic | 55.0% | |
| CCGAATTGGAAGGAGCTAGC+TGG | - | chr3_1:49746229-49746248 | Msa0360460:intron | 55.0% | |
| GGTCTGTGAACAAGCCAGCA+AGG | - | chr3_1:49746470-49746489 | Msa0360460:intron | 55.0% | |
| TTCCAGTAAGTGCCCCTTGC+TGG | + | chr3_1:49746487-49746506 | None:intergenic | 55.0% | |
| TTGTCGCCATAACGGCACCA+AGG | - | chr3_1:49746884-49746903 | Msa0360460:intron | 55.0% | |
| !! | TCCATGCCTTGGTGCCGTTA+TGG | + | chr3_1:49746893-49746912 | None:intergenic | 55.0% |
| ATAACGGCACCAAGGCATGG+AGG | - | chr3_1:49746892-49746911 | Msa0360460:intron | 55.0% | |
| CCATTGTAGCCTATACCGGC+TGG | + | chr3_1:49746926-49746945 | None:intergenic | 55.0% | |
| CCAGCCGGTATAGGCTACAA+TGG | - | chr3_1:49746923-49746942 | Msa0360460:intron | 55.0% | |
| GGCCTATGGCAGAAACATGC+CGG | + | chr3_1:49746958-49746977 | None:intergenic | 55.0% | |
| ! | CAAGCATGGACTGTGGCCTA+TGG | + | chr3_1:49746972-49746991 | None:intergenic | 55.0% |
| ! | TGGCACACAAGCATGGACTG+TGG | + | chr3_1:49746979-49746998 | None:intergenic | 55.0% |
| GGTGCATCATTGGCCGAAAC+TGG | + | chr3_1:49747598-49747617 | None:intergenic | 55.0% | |
| TGCACCTATGCTCACGGGGT+TGG | - | chr3_1:49746187-49746206 | Msa0360460:intron | 60.0% | |
| CTCACCAACCCCGTGAGCAT+AGG | + | chr3_1:49746194-49746213 | None:intergenic | 60.0% | |
| GAAGCCACCGCCGAATTGGA+AGG | - | chr3_1:49746219-49746238 | Msa0360460:intron | 60.0% | |
| AGCTCCTTCCAATTCGGCGG+TGG | + | chr3_1:49746226-49746245 | None:intergenic | 60.0% | |
| ! | CTGGCTCTCGCAACGAGGAA+TGG | - | chr3_1:49746248-49746267 | Msa0360460:intron | 60.0% |
| !! | AGCCAGCAAGGGGCACTTAC+TGG | - | chr3_1:49746482-49746501 | Msa0360460:intron | 60.0% |
| GCCATAACGGCACCAAGGCA+TGG | - | chr3_1:49746889-49746908 | Msa0360460:intron | 60.0% | |
| TGCACCTATGCTCACGGGGT+TGG | - | chr3_1:49746187-49746206 | Msa0360460:intron | 60.0% | |
| CTCACCAACCCCGTGAGCAT+AGG | + | chr3_1:49746194-49746213 | None:intergenic | 60.0% | |
| GAAGCCACCGCCGAATTGGA+AGG | - | chr3_1:49746219-49746238 | Msa0360460:intron | 60.0% | |
| AGCTCCTTCCAATTCGGCGG+TGG | + | chr3_1:49746226-49746245 | None:intergenic | 60.0% | |
| ! | CTGGCTCTCGCAACGAGGAA+TGG | - | chr3_1:49746248-49746267 | Msa0360460:intron | 60.0% |
| !! | AGCCAGCAAGGGGCACTTAC+TGG | - | chr3_1:49746482-49746501 | Msa0360460:intron | 60.0% |
| GCCATAACGGCACCAAGGCA+TGG | - | chr3_1:49746889-49746908 | Msa0360460:intron | 60.0% | |
| ! | GCTAGCTGGCTCTCGCAACG+AGG | - | chr3_1:49746243-49746262 | Msa0360460:intron | 65.0% |
| ! | GCTAGCTGGCTCTCGCAACG+AGG | - | chr3_1:49746243-49746262 | Msa0360460:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 49745980 | 49747762 | 49745980 | ID=Msa0360460;Name=Msa0360460 |
| chr3_1 | mRNA | 49745980 | 49747762 | 49745980 | ID=Msa0360460-mRNA-1;Parent=Msa0360460;Name=Msa0360460-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|2|0|249 |
| chr3_1 | exon | 49747201 | 49747762 | 49747201 | ID=Msa0360460-mRNA-1:exon:8749;Parent=Msa0360460-mRNA-1 |
| chr3_1 | exon | 49745980 | 49746167 | 49745980 | ID=Msa0360460-mRNA-1:exon:8748;Parent=Msa0360460-mRNA-1 |
| chr3_1 | CDS | 49747201 | 49747762 | 49747201 | ID=Msa0360460-mRNA-1:cds;Parent=Msa0360460-mRNA-1 |
| chr3_1 | CDS | 49745980 | 49746167 | 49745980 | ID=Msa0360460-mRNA-1:cds;Parent=Msa0360460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
