Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0361400 | XP_003617880.2 | 88.751 | 889 | 74 | 6 | 1 | 876 | 11 | 886 | 0.0 | 1513 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0361400 | sp|Q9LTS7|C3H65_ARATH | 32.067 | 421 | 213 | 12 | 330 | 724 | 231 | 604 | 3.35e-35 | 147 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0361400 | G7K4R9 | 88.751 | 889 | 74 | 6 | 1 | 876 | 11 | 886 | 0.0 | 1513 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0361400 | TF | C3H |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0361400 | MtrunA17_Chr5g0446991 | 88.639 | 889 | 74 | 7 | 1 | 876 | 11 | 885 | 0.0 | 1506 |
| Msa0361400 | MtrunA17_Chr3g0099651 | 87.318 | 891 | 92 | 8 | 1 | 876 | 11 | 895 | 0.0 | 1502 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0361400 | AT5G56930.1 | 32.067 | 421 | 213 | 12 | 330 | 724 | 231 | 604 | 3.40e-36 | 147 |
Find 226 sgRNAs with CRISPR-Local
Find 521 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCCATCTAATCTCTTTA+TGG | 0.121630 | 3_1:+51811494 | Msa0361400:CDS |
| TTAGAAGAGGGAGAAATTTC+TGG | 0.169773 | 3_1:+51811360 | Msa0361400:CDS |
| AAAGGCACTTCCTAACTTAT+TGG | 0.198623 | 3_1:+51816142 | Msa0361400:intron |
| ATTACTGGATTCTACAATTA+TGG | 0.231119 | 3_1:+51811239 | Msa0361400:CDS |
| TTGCCTCAGTCAGTCAATTT+TGG | 0.252130 | 3_1:+51815583 | Msa0361400:CDS |
| TATTCTGTTTCTCGCAGTTC+AGG | 0.265437 | 3_1:-51810822 | None:intergenic |
| TGCCAACATTCTTTAGCTTT+TGG | 0.265995 | 3_1:-51813100 | None:intergenic |
| TTCAGTTTCACTGCTGAATA+AGG | 0.267921 | 3_1:+51815618 | Msa0361400:CDS |
| TTCTCTCGCGGTATGGTTGC+AGG | 0.272606 | 3_1:+51816208 | Msa0361400:CDS |
| TGCATTTCCTTCAAGGGTAT+TGG | 0.305606 | 3_1:-51810586 | None:intergenic |
| ATTTATAAATCTAATTCCTT+TGG | 0.310961 | 3_1:-51815332 | None:intergenic |
| AGAATAAATTCTCTTAGAAT+TGG | 0.311344 | 3_1:-51815254 | None:intergenic |
| AATTAGTTTGGAGCAATATA+TGG | 0.311491 | 3_1:+51816767 | Msa0361400:three_prime_UTR |
| GACAGAAGATGGTGGATTAC+TGG | 0.316523 | 3_1:+51811224 | Msa0361400:CDS |
| GGAGCCTTGTGACACAAAAT+TGG | 0.318379 | 3_1:-51814768 | None:intergenic |
| ATCAGTTCAAGAGGTAAATA+AGG | 0.326202 | 3_1:+51815807 | Msa0361400:CDS |
| CGGTAGTGAAGTTGATTTGA+TGG | 0.337687 | 3_1:+51810846 | Msa0361400:CDS |
| ACAGAGATCTAGGTGTTAAA+AGG | 0.338944 | 3_1:+51813050 | Msa0361400:CDS |
| TGTTCTGGAGGCTGAAACTT+GGG | 0.340614 | 3_1:-51813073 | None:intergenic |
| TGATGCAGCAGAATTTCTTA+TGG | 0.341614 | 3_1:+51810681 | Msa0361400:CDS |
| TTTACCATAAAGAGATTAGA+TGG | 0.345594 | 3_1:-51811498 | None:intergenic |
| ACAAGCAATATTCTTGCTTC+TGG | 0.345966 | 3_1:+51816484 | Msa0361400:CDS |
| TGGACAAGATTTCCCTTGTT+TGG | 0.347517 | 3_1:-51815400 | None:intergenic |
| TTTATAAATCTAATTCCTTT+GGG | 0.352802 | 3_1:-51815331 | None:intergenic |
| GGTTGTACCGTGTCTTGTTT+TGG | 0.353400 | 3_1:-51815379 | None:intergenic |
| TTCTTGAGCTGATGATCATA+TGG | 0.355100 | 3_1:-51814734 | None:intergenic |
| CTTCAAGGGTATTGGACCCT+TGG | 0.362987 | 3_1:-51810578 | None:intergenic |
| TCATTTGGAACAGATGATAA+TGG | 0.364717 | 3_1:+51810738 | Msa0361400:CDS |
| ACCACTTTGTTCCTTTCTGC+TGG | 0.366420 | 3_1:-51812023 | None:intergenic |
| GTTTATGACATCTGGATACT+AGG | 0.370692 | 3_1:-51815912 | None:intergenic |
| TTCAAGGGTATTGGACCCTT+GGG | 0.374920 | 3_1:-51810577 | None:intergenic |
| CAACAACCCCTCGACGTTCC+TGG | 0.376511 | 3_1:+51809217 | Msa0361400:CDS |
| TGATGCTTGTTTATGACATC+TGG | 0.376626 | 3_1:-51815920 | None:intergenic |
| GGAGTCAACTTTCTTTCTTT+CGG | 0.379336 | 3_1:+51815496 | Msa0361400:CDS |
| TCTGGTTTGCAAGCATTTGT+AGG | 0.381821 | 3_1:-51815145 | None:intergenic |
| CTGCTGAATAAGGATGATAA+TGG | 0.386959 | 3_1:+51815628 | Msa0361400:CDS |
| GCAGGTAACTTTGAGCAAAT+TGG | 0.388859 | 3_1:+51816597 | Msa0361400:intron |
| GGGAAAGGTGGGTGAGAATA+CGG | 0.390618 | 3_1:-51809177 | None:intergenic |
| ATGATTTCTCCTTTCAAAAC+GGG | 0.394756 | 3_1:+51811456 | Msa0361400:CDS |
| CAACCATACCGCGAGAGAAA+TGG | 0.404420 | 3_1:-51816204 | None:intergenic |
| CATGTTGAACATCTGCGTTC+TGG | 0.406173 | 3_1:+51810883 | Msa0361400:CDS |
| CATGATTTCTCCTTTCAAAA+CGG | 0.407224 | 3_1:+51811455 | Msa0361400:CDS |
| AAAACCCTAAAACAAACAAT+TGG | 0.408977 | 3_1:-51809032 | None:intergenic |
| AGTCTTGCACAAAGGATTCA+TGG | 0.412264 | 3_1:+51811557 | Msa0361400:CDS |
| CTTGTCTCCAACACTTTCAA+TGG | 0.412681 | 3_1:-51810623 | None:intergenic |
| CACCCACCTTTCCCCTTCCA+CGG | 0.413435 | 3_1:+51809186 | Msa0361400:CDS |
| TCCTTCTTCAATCAGAATAT+CGG | 0.414405 | 3_1:-51811334 | None:intergenic |
| AATTCACCCTCTTGAATAGT+AGG | 0.414409 | 3_1:-51811114 | None:intergenic |
| TGGTTATCATCCAATAAGTT+AGG | 0.422956 | 3_1:-51816152 | None:intergenic |
| ACAACAAAAGGAAACAGAAT+TGG | 0.424477 | 3_1:+51811059 | Msa0361400:CDS |
| GACATCATGCATTTCCTTCA+AGG | 0.425648 | 3_1:-51810593 | None:intergenic |
| AAAACGGGTATCTCCTTTCA+AGG | 0.426280 | 3_1:+51811471 | Msa0361400:CDS |
| ATTCTGTTTCTCGCAGTTCA+GGG | 0.426340 | 3_1:-51810821 | None:intergenic |
| ACTCCCTTGGGCATGACAGC+TGG | 0.427412 | 3_1:-51815478 | None:intergenic |
| CAAGCGTGGTCCTGGTTCTC+AGG | 0.427999 | 3_1:+51812770 | Msa0361400:CDS |
| AGTGGGAGCAAGCGTGGTCC+TGG | 0.433030 | 3_1:+51812762 | Msa0361400:CDS |
| TTGTTCTGGAGGCTGAAACT+TGG | 0.433907 | 3_1:-51813074 | None:intergenic |
| GCAGAAAAGAACAGAGATCT+AGG | 0.434369 | 3_1:+51813040 | Msa0361400:CDS |
| TTGAAGTCTCCTCTTTCGTC+AGG | 0.434521 | 3_1:+51815169 | Msa0361400:CDS |
| TCCGATATTCTGATTGAAGA+AGG | 0.436958 | 3_1:+51811333 | Msa0361400:CDS |
| GAAATTAGAGAATCATCAAT+TGG | 0.438251 | 3_1:-51808998 | None:intergenic |
| TTTCAAGATAATGGCAATGT+TGG | 0.440769 | 3_1:+51810484 | Msa0361400:intron |
| GAAAGAGGAGACTTCAACTC+TGG | 0.441262 | 3_1:-51815163 | None:intergenic |
| AACTTTCTTTCTTTCGGCAA+AGG | 0.445900 | 3_1:+51815502 | Msa0361400:CDS |
| GATGCAGCAGAATTTCTTAT+GGG | 0.447634 | 3_1:+51810682 | Msa0361400:CDS |
| CAAGGGTCCAATACCCTTGA+AGG | 0.451166 | 3_1:+51810579 | Msa0361400:CDS |
| GAAGAAGGAGATTTAGAAGA+GGG | 0.451883 | 3_1:+51811348 | Msa0361400:CDS |
| AAACAATGAAAGACAACAAA+AGG | 0.454560 | 3_1:+51811047 | Msa0361400:CDS |
| AGTTGGAGCTTGTTGTGAAA+GGG | 0.455418 | 3_1:+51810764 | Msa0361400:CDS |
| GGAAGAACAGAGTGGACATA+AGG | 0.459870 | 3_1:+51811143 | Msa0361400:CDS |
| TGTGAGAATAGCGCAGTTTG+TGG | 0.460073 | 3_1:-51815682 | None:intergenic |
| CAACACTTTCAATGGTCTCA+TGG | 0.464908 | 3_1:-51810615 | None:intergenic |
| GAGAACTTTGAGTTAAAAGT+TGG | 0.467838 | 3_1:+51810538 | Msa0361400:CDS |
| GAAATGATAGCAAATGAAAC+GGG | 0.468695 | 3_1:-51816854 | None:intergenic |
| AGAAACTAAGATCAAACAAC+TGG | 0.469190 | 3_1:-51816656 | None:intergenic |
| ACATTCACCACCTCTACAAC+AGG | 0.473750 | 3_1:-51814789 | None:intergenic |
| GAAATTCTGCTGCATCATCT+AGG | 0.474076 | 3_1:-51810675 | None:intergenic |
| AGAAAGAAAGTTGACTCCCT+TGG | 0.474127 | 3_1:-51815491 | None:intergenic |
| CGGTAAGGAGGGAAAGGCAT+AGG | 0.476506 | 3_1:-51809115 | None:intergenic |
| TTTGTATTTCCTGACGAAAG+AGG | 0.479190 | 3_1:-51815178 | None:intergenic |
| AGGACCACGCTTGCTCCCAC+TGG | 0.479874 | 3_1:-51812760 | None:intergenic |
| AGTGGAACATGTGCAGATAA+AGG | 0.481118 | 3_1:+51815424 | Msa0361400:CDS |
| TCAGTCGTTCTGCCATGGAT+TGG | 0.481190 | 3_1:-51815723 | None:intergenic |
| TTTCCATTTCTCTCGCGGTA+TGG | 0.481376 | 3_1:+51816201 | Msa0361400:CDS |
| TTGTAGGCGTAGGTATATCT+TGG | 0.482397 | 3_1:-51815129 | None:intergenic |
| GAAAGAAAGTTGACTCCCTT+GGG | 0.483104 | 3_1:-51815490 | None:intergenic |
| ATTCCTTTGGGTGCTGAGGT+AGG | 0.484739 | 3_1:-51815319 | None:intergenic |
| AGAAATGATAGCAAATGAAA+CGG | 0.485502 | 3_1:-51816855 | None:intergenic |
| TAAGGCATCTGATAATTCTC+AGG | 0.485511 | 3_1:+51815825 | Msa0361400:CDS |
| ATTAAGATGAAATGCCCTAC+TGG | 0.486147 | 3_1:+51816003 | Msa0361400:CDS |
| ATTAAACTATCATCACAAAC+AGG | 0.487070 | 3_1:-51810796 | None:intergenic |
| AGGCGTAGGTATATCTTGGC+TGG | 0.488376 | 3_1:-51815125 | None:intergenic |
| TCACACCAATGTAGAACATA+AGG | 0.494563 | 3_1:+51815276 | Msa0361400:CDS |
| GAGTTGGAGCTTGTTGTGAA+AGG | 0.497925 | 3_1:+51810763 | Msa0361400:CDS |
| TGACAACAAATTTGCAAAGG+TGG | 0.499386 | 3_1:+51816432 | Msa0361400:CDS |
| GGAGCAAGAAAACCAGGAAA+AGG | 0.500866 | 3_1:+51810510 | Msa0361400:CDS |
| AGCATCAAACTTAGGCCAAA+GGG | 0.504606 | 3_1:+51815936 | Msa0361400:CDS |
| TGATTTCAGTCGTTCTGCCA+TGG | 0.505856 | 3_1:-51815728 | None:intergenic |
| CCACAAGCATGGTGAGTACA+TGG | 0.505934 | 3_1:-51814686 | None:intergenic |
| GTTCCCGTGATCTTTGATAG+AGG | 0.509690 | 3_1:-51811586 | None:intergenic |
| GTAAGTGACTGACAGGTAGA+TGG | 0.512050 | 3_1:-51816461 | None:intergenic |
| CCATGTACTCACCATGCTTG+TGG | 0.513250 | 3_1:+51814686 | Msa0361400:CDS |
| AGTGAGATCGACGGTAAGGA+GGG | 0.516597 | 3_1:-51809126 | None:intergenic |
| CGGGAACTCATCTGTAGTAC+AGG | 0.516954 | 3_1:+51811602 | Msa0361400:CDS |
| AATACCATGGACTTTGTTGA+AGG | 0.516955 | 3_1:-51814274 | None:intergenic |
| AAGTCGAAATGAATGCCCTT+TGG | 0.517002 | 3_1:-51815951 | None:intergenic |
| TATTGGATGATAACCAGGTA+GGG | 0.517457 | 3_1:+51816159 | Msa0361400:CDS |
| TTAGTTTCTTATAATTCTGA+AGG | 0.517702 | 3_1:+51816670 | Msa0361400:three_prime_UTR |
| AGGAGAAGAAAACTAGAAAG+AGG | 0.520032 | 3_1:+51812790 | Msa0361400:CDS |
| GGTAAGGAGGGAAAGGCATA+GGG | 0.522880 | 3_1:-51809114 | None:intergenic |
| AGCGTGTCCCTTTGTTGACT+CGG | 0.523684 | 3_1:-51810992 | None:intergenic |
| GTGGGTGAGAATACGGAGAA+GGG | 0.528000 | 3_1:-51809170 | None:intergenic |
| TCTTGAGCTGATGATCATAT+GGG | 0.529456 | 3_1:-51814733 | None:intergenic |
| CATTGAAAGTGTTGGAGACA+AGG | 0.530051 | 3_1:+51810624 | Msa0361400:CDS |
| GTTTCACTTCAATCTTCAGA+AGG | 0.530646 | 3_1:+51815889 | Msa0361400:CDS |
| ACAGATGATAATGGACGAGT+TGG | 0.532127 | 3_1:+51810747 | Msa0361400:CDS |
| GAGGTGCAGTCGCAAGTACA+AGG | 0.532562 | 3_1:+51810931 | Msa0361400:CDS |
| GAAGATTGAAGTGAAACAAA+GGG | 0.532824 | 3_1:-51815883 | None:intergenic |
| CATAAACAAGCATCAAACTT+AGG | 0.534817 | 3_1:+51815928 | Msa0361400:CDS |
| TTGAGTTGAAACCGTGGAAG+GGG | 0.538449 | 3_1:-51809197 | None:intergenic |
| AACCAAAAGCTAAAGAATGT+TGG | 0.539003 | 3_1:+51813098 | Msa0361400:CDS |
| TTCTGTTTCTCGCAGTTCAG+GGG | 0.542275 | 3_1:-51810820 | None:intergenic |
| GTCTACCTTATGTTCTACAT+TGG | 0.542393 | 3_1:-51815281 | None:intergenic |
| TGCTGATGTCAAGGATCCCA+AGG | 0.542510 | 3_1:+51810561 | Msa0361400:CDS |
| CCTCTTGAACTGATTTACAA+TGG | 0.543268 | 3_1:-51815798 | None:intergenic |
| TGAAGAAGGAGATTTAGAAG+AGG | 0.545846 | 3_1:+51811347 | Msa0361400:CDS |
| CGGAAGTGAGATCGACGGTA+AGG | 0.546628 | 3_1:-51809130 | None:intergenic |
| AAACCGTGGAAGGGGAAAGG+TGG | 0.548885 | 3_1:-51809189 | None:intergenic |
| GCTTGTGGCTCTTGTATGAA+AGG | 0.549682 | 3_1:+51814701 | Msa0361400:CDS |
| AGATAATGGCAATGTTGGAA+TGG | 0.553834 | 3_1:+51810489 | Msa0361400:intron |
| GGATTTGAGTGCCAATGCTA+TGG | 0.554777 | 3_1:+51810651 | Msa0361400:CDS |
| GAATGTTGGCATTATATGAA+AGG | 0.554942 | 3_1:+51813112 | Msa0361400:CDS |
| GGTGGGTGAGAATACGGAGA+AGG | 0.555718 | 3_1:-51809171 | None:intergenic |
| AGTACACCACTGAATAATCA+TGG | 0.555772 | 3_1:+51815205 | Msa0361400:CDS |
| ACATCATGCATTTCCTTCAA+GGG | 0.556388 | 3_1:-51810592 | None:intergenic |
| GATGCCAGTGGGAGCAAGCG+TGG | 0.557169 | 3_1:+51812756 | Msa0361400:CDS |
| AAAAGTTGGTGCTGATGTCA+AGG | 0.557812 | 3_1:+51810552 | Msa0361400:CDS |
| TGAAGATTGAAGTGAAACAA+AGG | 0.558580 | 3_1:-51815884 | None:intergenic |
| TGCTTGTGTAAGTGACTGAC+AGG | 0.562058 | 3_1:-51816468 | None:intergenic |
| TTATGACAACAAATTTGCAA+AGG | 0.563416 | 3_1:+51816429 | Msa0361400:CDS |
| GAAACCTCTATCAAAGATCA+CGG | 0.564467 | 3_1:+51811582 | Msa0361400:CDS |
| CATGTATATCACAAGATACA+AGG | 0.564732 | 3_1:-51816818 | None:intergenic |
| TGTTGAGTTGAAACCGTGGA+AGG | 0.564884 | 3_1:-51809199 | None:intergenic |
| GGTGAGAATACGGAGAAGGG+TGG | 0.566031 | 3_1:-51809167 | None:intergenic |
| TCTAATTCCTTTGGGTGCTG+AGG | 0.566303 | 3_1:-51815323 | None:intergenic |
| GGAAACAGAATTGGTAACAC+TGG | 0.567719 | 3_1:+51811068 | Msa0361400:CDS |
| GAGTGTTGATGCCAGCAGAA+AGG | 0.567766 | 3_1:+51812012 | Msa0361400:CDS |
| CAATATCATTCCTTCTGCAG+TGG | 0.568846 | 3_1:-51815557 | None:intergenic |
| AAACCATCTGTCTGTGTAGA+CGG | 0.571182 | 3_1:-51810715 | None:intergenic |
| TTGCAAGCATTTGTAGGCGT+AGG | 0.572990 | 3_1:-51815139 | None:intergenic |
| ACTAGCAAGAAGCGTAGCTG+AGG | 0.573123 | 3_1:-51815860 | None:intergenic |
| CAAGGCTCCTGTTGTAGAGG+TGG | 0.574094 | 3_1:+51814782 | Msa0361400:CDS |
| TCTATTCACTCCACTGCAGA+AGG | 0.576435 | 3_1:+51815547 | Msa0361400:CDS |
| ACACTGGTTTGTCCTCTAGC+AGG | 0.577354 | 3_1:+51811084 | Msa0361400:CDS |
| CCACTGAATAATCATGGCAC+TGG | 0.577523 | 3_1:+51815211 | Msa0361400:CDS |
| CATGTGTCCGAGTCAACAAA+GGG | 0.577612 | 3_1:+51810985 | Msa0361400:CDS |
| ATCATCTAGGACCATAGCAT+TGG | 0.578913 | 3_1:-51810662 | None:intergenic |
| CAGCAGATGGTTGATGCCAG+TGG | 0.579030 | 3_1:+51812744 | Msa0361400:intron |
| TTGAAACCGTGGAAGGGGAA+AGG | 0.581842 | 3_1:-51809192 | None:intergenic |
| TCAAGAGGGTGAATTTGAGA+AGG | 0.583214 | 3_1:+51811122 | Msa0361400:CDS |
| CTTAATCAACTTGACTCGGA+AGG | 0.583971 | 3_1:+51810958 | Msa0361400:CDS |
| CATGAGACCATTGAAAGTGT+TGG | 0.585803 | 3_1:+51810616 | Msa0361400:CDS |
| TGGAATGGAGCAAGAAAACC+AGG | 0.585974 | 3_1:+51810504 | Msa0361400:CDS |
| GTTGAGTTGAAACCGTGGAA+GGG | 0.587144 | 3_1:-51809198 | None:intergenic |
| AGACACGGTACAACCAAACA+AGG | 0.587232 | 3_1:+51815387 | Msa0361400:CDS |
| AAGCATCAAACTTAGGCCAA+AGG | 0.587431 | 3_1:+51815935 | Msa0361400:CDS |
| AAGTGAGATCGACGGTAAGG+AGG | 0.587724 | 3_1:-51809127 | None:intergenic |
| TATTCCAGCTGTCATGCCCA+AGG | 0.588364 | 3_1:+51815474 | Msa0361400:CDS |
| CTTGTGGCTCTTGTATGAAA+GGG | 0.589000 | 3_1:+51814702 | Msa0361400:CDS |
| TTATGTTTCCATTTCTCTCG+CGG | 0.590984 | 3_1:+51816196 | Msa0361400:CDS |
| TAACTTATTGGATGATAACC+AGG | 0.591147 | 3_1:+51816154 | Msa0361400:CDS |
| TCTGTTTCTCGCAGTTCAGG+GGG | 0.593070 | 3_1:-51810819 | None:intergenic |
| TTATTGGATGATAACCAGGT+AGG | 0.595848 | 3_1:+51816158 | Msa0361400:CDS |
| GGAGAAGAAAACTAGAAAGA+GGG | 0.596213 | 3_1:+51812791 | Msa0361400:CDS |
| GCATTGAATATGACAGAAGA+TGG | 0.598965 | 3_1:+51811213 | Msa0361400:CDS |
| ATTAGATGGAAAGCCTTGAA+AGG | 0.601531 | 3_1:-51811484 | None:intergenic |
| CCATTGTAAATCAGTTCAAG+AGG | 0.603579 | 3_1:+51815798 | Msa0361400:CDS |
| TATTCCTTCAACAAAGTCCA+TGG | 0.605729 | 3_1:+51814270 | Msa0361400:CDS |
| TCACAAGGCTCCTGTTGTAG+AGG | 0.606005 | 3_1:+51814779 | Msa0361400:CDS |
| AACCGTGGAAGGGGAAAGGT+GGG | 0.606872 | 3_1:-51809188 | None:intergenic |
| ATTGAAAGTGTTGGAGACAA+GGG | 0.607556 | 3_1:+51810625 | Msa0361400:CDS |
| TCATGTGTCCGAGTCAACAA+AGG | 0.608096 | 3_1:+51810984 | Msa0361400:CDS |
| GATCGACGGTAAGGAGGGAA+AGG | 0.609933 | 3_1:-51809121 | None:intergenic |
| AGAGCTTAATCAACTTGACT+CGG | 0.611851 | 3_1:+51810954 | Msa0361400:CDS |
| ATATCTTCCTACTATTCAAG+AGG | 0.612456 | 3_1:+51811107 | Msa0361400:CDS |
| ATTGGATGATAACCAGGTAG+GGG | 0.615252 | 3_1:+51816160 | Msa0361400:CDS |
| CATACAGGTGAAGCACCAGT+AGG | 0.616513 | 3_1:-51816018 | None:intergenic |
| CACGTCTGAAAGTGTAAGTG+AGG | 0.619677 | 3_1:+51810912 | Msa0361400:CDS |
| TTCAGCTGATGATTCTGTGA+GGG | 0.619873 | 3_1:+51815768 | Msa0361400:CDS |
| CTAAAACAAACAATTGGAGA+AGG | 0.622858 | 3_1:-51809026 | None:intergenic |
| AAACCTCTATCAAAGATCAC+GGG | 0.622912 | 3_1:+51811583 | Msa0361400:CDS |
| GTAGGAAGATATCCTGCTAG+AGG | 0.623148 | 3_1:-51811096 | None:intergenic |
| GGATGTACCAGGAACGTCGA+GGG | 0.627078 | 3_1:-51809224 | None:intergenic |
| GTTGGAGCTTGTTGTGAAAG+GGG | 0.628380 | 3_1:+51810765 | Msa0361400:CDS |
| ACTTGATGTACTACTAATCA+CGG | 0.640241 | 3_1:-51811022 | None:intergenic |
| ATTCCAGCTGTCATGCCCAA+GGG | 0.640386 | 3_1:+51815475 | Msa0361400:CDS |
| ATACAGGTGAAGCACCAGTA+GGG | 0.641549 | 3_1:-51816017 | None:intergenic |
| AAACCAAAATTGACTGACTG+AGG | 0.641965 | 3_1:-51815586 | None:intergenic |
| TTGAATATGACAGAAGATGG+TGG | 0.642220 | 3_1:+51811216 | Msa0361400:CDS |
| CACATTTGATGTGTCTTCTG+CGG | 0.643979 | 3_1:+51811404 | Msa0361400:CDS |
| AAGTGTTGGAGACAAGGGCA+AGG | 0.644118 | 3_1:+51810630 | Msa0361400:CDS |
| GAACCGTCTACACAGACAGA+TGG | 0.647822 | 3_1:+51810712 | Msa0361400:CDS |
| AGCAGATGGTTGATGCCAGT+GGG | 0.654439 | 3_1:+51812745 | Msa0361400:intron |
| TTGGATGATAACCAGGTAGG+GGG | 0.657785 | 3_1:+51816161 | Msa0361400:CDS |
| GATGTACCAGGAACGTCGAG+GGG | 0.658609 | 3_1:-51809223 | None:intergenic |
| GATGTTCAACATGTTCTACT+CGG | 0.659808 | 3_1:-51810873 | None:intergenic |
| AAGCCTACCTCAGCACCCAA+AGG | 0.664036 | 3_1:+51815316 | Msa0361400:CDS |
| TCATACAAGAGCCACAAGCA+TGG | 0.664244 | 3_1:-51814697 | None:intergenic |
| TATCTTCCTACTATTCAAGA+GGG | 0.665073 | 3_1:+51811108 | Msa0361400:CDS |
| TGTGACACAAAATTGGAACA+AGG | 0.672044 | 3_1:-51814761 | None:intergenic |
| GCTGATGTCAAGGATCCCAA+GGG | 0.678207 | 3_1:+51810562 | Msa0361400:CDS |
| CCAGTGCCATGATTATTCAG+TGG | 0.679404 | 3_1:-51815211 | None:intergenic |
| GCCAGCAGAAAGGAACAAAG+TGG | 0.681605 | 3_1:+51812022 | Msa0361400:CDS |
| AGGATGTACCAGGAACGTCG+AGG | 0.685425 | 3_1:-51809225 | None:intergenic |
| TAGTACACCAAAACAAGACA+CGG | 0.696951 | 3_1:+51815372 | Msa0361400:CDS |
| ATTCAGCTGATGATTCTGTG+AGG | 0.697116 | 3_1:+51815767 | Msa0361400:CDS |
| GACACGGTACAACCAAACAA+GGG | 0.697668 | 3_1:+51815388 | Msa0361400:CDS |
| TTTGAGAAGGAAGAACAGAG+TGG | 0.707706 | 3_1:+51811135 | Msa0361400:CDS |
| GACTGCGGAAGTGAGATCGA+CGG | 0.713161 | 3_1:-51809135 | None:intergenic |
| GGGTTGTTGAGTTGAAACCG+TGG | 0.716296 | 3_1:-51809203 | None:intergenic |
| GGGTGGTGTAAGTATGACTG+CGG | 0.717820 | 3_1:-51809150 | None:intergenic |
| AGATAAAGGTCAAAATACTG+CGG | 0.725271 | 3_1:+51815438 | Msa0361400:CDS |
| TATGAAAGGAAGATGCCATG+AGG | 0.725457 | 3_1:+51813126 | Msa0361400:CDS |
| AACTGCGAGAAACAGAATAG+CGG | 0.734818 | 3_1:+51810826 | Msa0361400:CDS |
| TATCTGCACATGTTCCACTG+TGG | 0.736675 | 3_1:-51815420 | None:intergenic |
| AAGGGAAATCTTGTCCACAG+TGG | 0.738177 | 3_1:+51815406 | Msa0361400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAATATATTGAAGAAA+AGG | - | chr3_1:51810156-51810175 | None:intergenic | 10.0% |
| !! | ATCAACAAATATAAAAAAAA+AGG | - | chr3_1:51810266-51810285 | None:intergenic | 10.0% |
| !! | TTGAATATTCATTTATATAT+GGG | + | chr3_1:51813694-51813713 | Msa0361400:intron | 10.0% |
| !!! | ACATATTTATTTTAATATAG+CGG | + | chr3_1:51816287-51816306 | Msa0361400:intron | 10.0% |
| !! | TTAAAATTGAGAATTGTTAA+TGG | + | chr3_1:51809053-51809072 | Msa0361400:intron | 15.0% |
| !!! | ATTTATATTTTTGTTTTGAC+AGG | - | chr3_1:51810196-51810215 | None:intergenic | 15.0% |
| !! | GTAAAGGTAAATAAAATAAA+AGG | - | chr3_1:51811674-51811693 | None:intergenic | 15.0% |
| !! | TATTAAAAATTACATAAGGA+AGG | - | chr3_1:51811807-51811826 | None:intergenic | 15.0% |
| !! | TACATTATAATAAATGATGT+GGG | - | chr3_1:51812328-51812347 | None:intergenic | 15.0% |
| !! | ATACATTATAATAAATGATG+TGG | - | chr3_1:51812329-51812348 | None:intergenic | 15.0% |
| !! | CATTTATTATAATGTATTGA+AGG | + | chr3_1:51812332-51812351 | Msa0361400:intron | 15.0% |
| !!! | ATAATTGACAAGTTATTTTA+CGG | + | chr3_1:51812612-51812631 | Msa0361400:intron | 15.0% |
| !! | AAAATATATCTACAAGTTTA+GGG | - | chr3_1:51812862-51812881 | None:intergenic | 15.0% |
| !!! | TATTTTATTATAGAGCATTA+TGG | + | chr3_1:51813500-51813519 | Msa0361400:intron | 15.0% |
| !! | CTTGAATATTCATTTATATA+TGG | + | chr3_1:51813693-51813712 | Msa0361400:intron | 15.0% |
| !! | TGAATATTCATTTATATATG+GGG | + | chr3_1:51813695-51813714 | Msa0361400:intron | 15.0% |
| !!! | TTTAATTTAAGTCATGAATA+CGG | - | chr3_1:51813791-51813810 | None:intergenic | 15.0% |
| !! | ATAAAAAACAAAAATTTACC+GGG | - | chr3_1:51814390-51814409 | None:intergenic | 15.0% |
| !! | GATAAAAAACAAAAATTTAC+CGG | - | chr3_1:51814391-51814410 | None:intergenic | 15.0% |
| !! | TTTATAAATCTAATTCCTTT+GGG | - | chr3_1:51815334-51815353 | None:intergenic | 15.0% |
| !! | ATTTATAAATCTAATTCCTT+TGG | - | chr3_1:51815335-51815354 | None:intergenic | 15.0% |
| !!! | TGGATTGATTTTTTTTTTTT+AGG | - | chr3_1:51816099-51816118 | None:intergenic | 15.0% |
| !!! | GTTAATTGGTTTTAAAATTT+TGG | + | chr3_1:51816529-51816548 | Msa0361400:intron | 15.0% |
| !!! | TCTGATTTCTAAATATTTTT+TGG | + | chr3_1:51816727-51816746 | Msa0361400:three_prime_UTR | 15.0% |
| !!! | CTGATTTCTAAATATTTTTT+GGG | + | chr3_1:51816728-51816747 | Msa0361400:three_prime_UTR | 15.0% |
| !! | AATCATTTCAATTGAATGTT+TGG | + | chr3_1:51809435-51809454 | Msa0361400:intron | 20.0% |
| !! | AATAATATCAGAAAAGAATG+GGG | - | chr3_1:51810077-51810096 | None:intergenic | 20.0% |
| !! | CAATAATATCAGAAAAGAAT+GGG | - | chr3_1:51810078-51810097 | None:intergenic | 20.0% |
| !! | TCAATAATATCAGAAAAGAA+TGG | - | chr3_1:51810079-51810098 | None:intergenic | 20.0% |
| !!! | TTTTGTTAATTGAAAACACA+AGG | + | chr3_1:51810125-51810144 | Msa0361400:intron | 20.0% |
| !! | AATATATTGAAGAAAAGGAA+CGG | - | chr3_1:51810151-51810170 | None:intergenic | 20.0% |
| !! | TGAATTAAAGCTTATTTGTT+TGG | + | chr3_1:51810357-51810376 | Msa0361400:intron | 20.0% |
| !! | AGGTAAATAAAATAAAAGGT+AGG | - | chr3_1:51811670-51811689 | None:intergenic | 20.0% |
| !! | GTTTGGGAAAATTTATTTAA+TGG | + | chr3_1:51811846-51811865 | Msa0361400:intron | 20.0% |
| !! | TTGAATAGTTGTCTATATTA+TGG | - | chr3_1:51811933-51811952 | None:intergenic | 20.0% |
| !! | TAAGAAGAAGAAAAACAAAA+AGG | + | chr3_1:51812054-51812073 | Msa0361400:CDS | 20.0% |
| !! | TTATCTTCTTCATAAATAGT+AGG | - | chr3_1:51812215-51812234 | None:intergenic | 20.0% |
| !! | CCTATATTAATTTCAACAAA+TGG | - | chr3_1:51812284-51812303 | None:intergenic | 20.0% |
| !!! | CCATTTGTTGAAATTAATAT+AGG | + | chr3_1:51812281-51812300 | Msa0361400:intron | 20.0% |
| !! | AAATAAATTGGCAAACTTAA+TGG | - | chr3_1:51812494-51812513 | None:intergenic | 20.0% |
| !! | AAATAAATTGGCAAACTTAA+TGG | - | chr3_1:51812494-51812513 | None:intergenic | 20.0% |
| !!! | ATTATTTTAGAGTTCCATAA+TGG | + | chr3_1:51812655-51812674 | Msa0361400:intron | 20.0% |
| !!! | TTATTTTAGAGTTCCATAAT+GGG | + | chr3_1:51812656-51812675 | Msa0361400:intron | 20.0% |
| !! | CAAAATATATCTACAAGTTT+AGG | - | chr3_1:51812863-51812882 | None:intergenic | 20.0% |
| !! | AATACGAAAACATAGAAATA+GGG | - | chr3_1:51812961-51812980 | None:intergenic | 20.0% |
| !! | TAATACGAAAACATAGAAAT+AGG | - | chr3_1:51812962-51812981 | None:intergenic | 20.0% |
| !! | ATATAAAGTGAAGAATAAGT+CGG | - | chr3_1:51813179-51813198 | None:intergenic | 20.0% |
| !!! | TATCTTGTTATTTAAAGACA+TGG | - | chr3_1:51813729-51813748 | None:intergenic | 20.0% |
| !! | TATGTATGAAAACTTCAATT+AGG | - | chr3_1:51813943-51813962 | None:intergenic | 20.0% |
| !!! | ATACTTGATAGTTGATAAAA+AGG | - | chr3_1:51814017-51814036 | None:intergenic | 20.0% |
| !! | TAAACTTGAAAAGAATACTA+GGG | - | chr3_1:51814320-51814339 | None:intergenic | 20.0% |
| !! | TTAAACTTGAAAAGAATACT+AGG | - | chr3_1:51814321-51814340 | None:intergenic | 20.0% |
| !!! | TTCAAGTTTAAATATGTCTA+TGG | + | chr3_1:51814330-51814349 | Msa0361400:intron | 20.0% |
| !! | TAAAAAACAAAAATTTACCG+GGG | - | chr3_1:51814389-51814408 | None:intergenic | 20.0% |
| !!! | AATATACCACTTTTTACTTT+TGG | + | chr3_1:51814417-51814436 | Msa0361400:intron | 20.0% |
| !! | TGAGATTAAAACAAAAATCA+TGG | - | chr3_1:51814444-51814463 | None:intergenic | 20.0% |
| !! | TGAATATCAAACACATTAAA+GGG | - | chr3_1:51814494-51814513 | None:intergenic | 20.0% |
| !! | ATGAATATCAAACACATTAA+AGG | - | chr3_1:51814495-51814514 | None:intergenic | 20.0% |
| !!! | AAATATGTTTTTGTTCATGT+TGG | - | chr3_1:51814592-51814611 | None:intergenic | 20.0% |
| !! | ATTGTATATTTATTCTCTCT+TGG | + | chr3_1:51815069-51815088 | Msa0361400:intron | 20.0% |
| !! | AGAATAAATTCTCTTAGAAT+TGG | - | chr3_1:51815257-51815276 | None:intergenic | 20.0% |
| !! | TTAGTTTCTTATAATTCTGA+AGG | + | chr3_1:51816670-51816689 | Msa0361400:three_prime_UTR | 20.0% |
| !!! | ATTCTGAAGAAAAATTAGTT+TGG | + | chr3_1:51816755-51816774 | Msa0361400:three_prime_UTR | 20.0% |
| ! | GAAATTAGAGAATCATCAAT+TGG | - | chr3_1:51809001-51809020 | None:intergenic | 25.0% |
| !!! | TTCTCCAATTGTTTGTTTTA+GGG | + | chr3_1:51809028-51809047 | Msa0361400:five_prime_UTR | 25.0% |
| ! | AAAACCCTAAAACAAACAAT+TGG | - | chr3_1:51809035-51809054 | None:intergenic | 25.0% |
| !!! | TTAATGGTTTTTTTCTGCAA+TGG | + | chr3_1:51809069-51809088 | Msa0361400:intron | 25.0% |
| ! | TAAGGAAAATAGGATATGAA+AGG | - | chr3_1:51809248-51809267 | None:intergenic | 25.0% |
| ! | ACAGTAAGAATAAGGAAAAT+AGG | - | chr3_1:51809258-51809277 | None:intergenic | 25.0% |
| !!! | AAAATTGATTTTGACATGTC+TGG | - | chr3_1:51809662-51809681 | None:intergenic | 25.0% |
| ! | AGTACAAAATGTGTTCAAAA+TGG | + | chr3_1:51809789-51809808 | Msa0361400:intron | 25.0% |
| ! | GTTATAACAATATTGCATAG+CGG | + | chr3_1:51809825-51809844 | Msa0361400:intron | 25.0% |
| ! | TGTGCTATATTACTCTATTA+AGG | + | chr3_1:51809982-51810001 | Msa0361400:intron | 25.0% |
| ! | GTGCTATATTACTCTATTAA+GGG | + | chr3_1:51809983-51810002 | Msa0361400:intron | 25.0% |
| ! | ATAATATCAGAAAAGAATGG+GGG | - | chr3_1:51810076-51810095 | None:intergenic | 25.0% |
| !! | TTGTTGATTGAAAAACAGAA+AGG | + | chr3_1:51810278-51810297 | Msa0361400:intron | 25.0% |
| !! | TATTTGTTTGGTTGTTGTTA+TGG | + | chr3_1:51810369-51810388 | Msa0361400:intron | 25.0% |
| !! | TTATGGATCAAATTGATGAT+AGG | + | chr3_1:51810386-51810405 | Msa0361400:intron | 25.0% |
| ! | ATTAAACTATCATCACAAAC+AGG | - | chr3_1:51810799-51810818 | None:intergenic | 25.0% |
| ! | AAACAATGAAAGACAACAAA+AGG | + | chr3_1:51811047-51811066 | Msa0361400:CDS | 25.0% |
| ! | ATTACTGGATTCTACAATTA+TGG | + | chr3_1:51811239-51811258 | Msa0361400:CDS | 25.0% |
| !!! | AATTTCTGGAGATTTTTCAA+TGG | + | chr3_1:51811374-51811393 | Msa0361400:CDS | 25.0% |
| ! | TTTACCATAAAGAGATTAGA+TGG | - | chr3_1:51811501-51811520 | None:intergenic | 25.0% |
| !!! | ACTTGATTTTTGGTTAAAGT+TGG | - | chr3_1:51811540-51811559 | None:intergenic | 25.0% |
| ! | GCATATTGTGCTAAAATAAT+GGG | - | chr3_1:51811639-51811658 | None:intergenic | 25.0% |
| ! | TGCATATTGTGCTAAAATAA+TGG | - | chr3_1:51811640-51811659 | None:intergenic | 25.0% |
| ! | GAGTACAAAACATAATGTAA+AGG | - | chr3_1:51811690-51811709 | None:intergenic | 25.0% |
| ! | ATTTATCTTCCATTCATCAT+TGG | - | chr3_1:51811717-51811736 | None:intergenic | 25.0% |
| ! | GAGTACAAAACATAATGTAA+TGG | - | chr3_1:51811690-51811709 | None:intergenic | 25.0% |
| ! | TGGGAAAATTTATTTAATGG+TGG | + | chr3_1:51811849-51811868 | Msa0361400:intron | 25.0% |
| ! | TATATTATGGAACTCTACAT+AGG | - | chr3_1:51811920-51811939 | None:intergenic | 25.0% |
| ! | TATTCAATGATGCTAAAACT+TGG | + | chr3_1:51811946-51811965 | Msa0361400:intron | 25.0% |
| ! | GATAATGAATCAACTGATAT+TGG | - | chr3_1:51812193-51812212 | None:intergenic | 25.0% |
| ! | ATACCTACAAGCAAATAAAT+TGG | - | chr3_1:51812506-51812525 | None:intergenic | 25.0% |
| ! | TTGAAATAGGGCAAATAAAT+TGG | - | chr3_1:51812563-51812582 | None:intergenic | 25.0% |
| !! | ATTTGCCCTATTTCAATTTT+TGG | + | chr3_1:51812567-51812586 | Msa0361400:intron | 25.0% |
| !! | TTTGCCCTATTTCAATTTTT+GGG | + | chr3_1:51812568-51812587 | Msa0361400:intron | 25.0% |
| !! | AAATAATAGCCTTAAGGATT+TGG | - | chr3_1:51812642-51812661 | None:intergenic | 25.0% |
| !!! | ACTCTAAAATAATAGCCTTA+AGG | - | chr3_1:51812648-51812667 | None:intergenic | 25.0% |
| !!! | TATTTTAGAGTTCCATAATG+GGG | + | chr3_1:51812657-51812676 | Msa0361400:intron | 25.0% |
| ! | TATAAAGTGAAGAATAAGTC+GGG | - | chr3_1:51813178-51813197 | None:intergenic | 25.0% |
| ! | GAAACTTAAAACAAGCATAA+AGG | - | chr3_1:51813209-51813228 | None:intergenic | 25.0% |
| !! | GTTTCTCTAATAGTTTTTCT+AGG | - | chr3_1:51813441-51813460 | None:intergenic | 25.0% |
| !!! | TGCTTCATTTAACTTTTTGA+AGG | + | chr3_1:51813632-51813651 | Msa0361400:intron | 25.0% |
| ! | TTGACAAAAACAAATTTGAC+AGG | + | chr3_1:51814219-51814238 | Msa0361400:intron | 25.0% |
| ! | TGACAAAAACAAATTTGACA+GGG | + | chr3_1:51814220-51814239 | Msa0361400:intron | 25.0% |
| !!! | TTTTAAAAAGACCAATACCA+TGG | - | chr3_1:51814290-51814309 | None:intergenic | 25.0% |
| ! | TAAAAAGTGGTATATTTGCA+AGG | - | chr3_1:51814413-51814432 | None:intergenic | 25.0% |
| !! | TCAGTAAAATTTGTTCTTGT+TGG | + | chr3_1:51814461-51814480 | Msa0361400:intron | 25.0% |
| !!! | TATGCAGAGTATTTGATTTT+AGG | - | chr3_1:51814555-51814574 | None:intergenic | 25.0% |
| ! | GCAATTTCAAAATCAATACA+AGG | - | chr3_1:51814664-51814683 | None:intergenic | 25.0% |
| ! | TACAACAAGTAAAGTTGAAT+AGG | - | chr3_1:51814839-51814858 | None:intergenic | 25.0% |
| ! | TAATCAATGTTGTCTTATAG+CGG | + | chr3_1:51814888-51814907 | Msa0361400:intron | 25.0% |
| ! | TTTGTACAAATAGTGTATCA+CGG | - | chr3_1:51814961-51814980 | None:intergenic | 25.0% |
| !!! | TTGAACAAACTTCTTTTTTC+CGG | + | chr3_1:51815009-51815028 | Msa0361400:intron | 25.0% |
| !! | GACTGAAATCAAGATTTTTA+GGG | + | chr3_1:51815740-51815759 | Msa0361400:CDS | 25.0% |
| ! | TCAAAATAACAATTGAACCA+AGG | - | chr3_1:51816267-51816286 | None:intergenic | 25.0% |
| ! | TTATGACAACAAATTTGCAA+AGG | + | chr3_1:51816429-51816448 | Msa0361400:CDS | 25.0% |
| !! | AATTAGTTTGGAGCAATATA+TGG | + | chr3_1:51816767-51816786 | Msa0361400:three_prime_UTR | 25.0% |
| ! | AGAAATGATAGCAAATGAAA+CGG | - | chr3_1:51816858-51816877 | None:intergenic | 25.0% |
| CTAAAACAAACAATTGGAGA+AGG | - | chr3_1:51809029-51809048 | None:intergenic | 30.0% | |
| !! | CTTCTCCAATTGTTTGTTTT+AGG | + | chr3_1:51809027-51809046 | Msa0361400:five_prime_UTR | 30.0% |
| AAGCAACAACAGTAAGAATA+AGG | - | chr3_1:51809266-51809285 | None:intergenic | 30.0% | |
| AATTTCTATTAGTAGCCTAG+TGG | - | chr3_1:51809363-51809382 | None:intergenic | 30.0% | |
| GAAATTGAGAGAGAAAAAGA+AGG | + | chr3_1:51809377-51809396 | Msa0361400:intron | 30.0% | |
| ! | AACCAAAATCGACTCTTAAA+AGG | - | chr3_1:51809688-51809707 | None:intergenic | 30.0% |
| AAACATAGGCTAAAGTGTAA+CGG | + | chr3_1:51809725-51809744 | Msa0361400:intron | 30.0% | |
| ACAAAATGTGTTCAAAATGG+CGG | + | chr3_1:51809792-51809811 | Msa0361400:intron | 30.0% | |
| TACAAGGTTAACACATTGTT+TGG | + | chr3_1:51809954-51809973 | Msa0361400:intron | 30.0% | |
| ATAATTTGATGTCACAGCTA+AGG | + | chr3_1:51810214-51810233 | Msa0361400:intron | 30.0% | |
| !!! | TTTTTTGTGAAGTTTCCTGT+TGG | + | chr3_1:51810330-51810349 | Msa0361400:intron | 30.0% |
| GCTTTAATTCAAAATCCAAC+AGG | - | chr3_1:51810348-51810367 | None:intergenic | 30.0% | |
| ! | GAAAAGTGCAGCAATTATAT+AGG | - | chr3_1:51810413-51810432 | None:intergenic | 30.0% |
| TTCTTCCTCTTTCAAGATAA+TGG | + | chr3_1:51810475-51810494 | Msa0361400:intron | 30.0% | |
| ! | TTTCAAGATAATGGCAATGT+TGG | + | chr3_1:51810484-51810503 | Msa0361400:intron | 30.0% |
| !! | ACTTTTAACTCAAAGTTCTC+AGG | - | chr3_1:51810538-51810557 | None:intergenic | 30.0% |
| ! | GAGAACTTTGAGTTAAAAGT+TGG | + | chr3_1:51810538-51810557 | Msa0361400:CDS | 30.0% |
| ! | TCATTTGGAACAGATGATAA+TGG | + | chr3_1:51810738-51810757 | Msa0361400:CDS | 30.0% |
| ACTTGATGTACTACTAATCA+CGG | - | chr3_1:51811025-51811044 | None:intergenic | 30.0% | |
| ACAACAAAAGGAAACAGAAT+TGG | + | chr3_1:51811059-51811078 | Msa0361400:CDS | 30.0% | |
| ATATCTTCCTACTATTCAAG+AGG | + | chr3_1:51811107-51811126 | Msa0361400:CDS | 30.0% | |
| TATCTTCCTACTATTCAAGA+GGG | + | chr3_1:51811108-51811127 | Msa0361400:CDS | 30.0% | |
| TCCTTCTTCAATCAGAATAT+CGG | - | chr3_1:51811337-51811356 | None:intergenic | 30.0% | |
| CATGATTTCTCCTTTCAAAA+CGG | + | chr3_1:51811455-51811474 | Msa0361400:CDS | 30.0% | |
| ATGATTTCTCCTTTCAAAAC+GGG | + | chr3_1:51811456-51811475 | Msa0361400:CDS | 30.0% | |
| CTTTCCATCTAATCTCTTTA+TGG | + | chr3_1:51811494-51811513 | Msa0361400:CDS | 30.0% | |
| ! | TTTGTGCAAGACTTGATTTT+TGG | - | chr3_1:51811550-51811569 | None:intergenic | 30.0% |
| AAAAATCAAGTCTTGCACAA+AGG | + | chr3_1:51811549-51811568 | Msa0361400:CDS | 30.0% | |
| GAATATCTTCAGTTCATCAT+TGG | - | chr3_1:51811775-51811794 | None:intergenic | 30.0% | |
| TTCCCAAACAAACTCAAATA+GGG | - | chr3_1:51811835-51811854 | None:intergenic | 30.0% | |
| TTTCCCAAACAAACTCAAAT+AGG | - | chr3_1:51811836-51811855 | None:intergenic | 30.0% | |
| TTATCATCAACCATATCCTT+CGG | + | chr3_1:51811891-51811910 | Msa0361400:intron | 30.0% | |
| ! | TTTTTCTTCTTCTTAGCATC+AGG | - | chr3_1:51812049-51812068 | None:intergenic | 30.0% |
| AGGTGTTCTTCTTATATTGT+TGG | + | chr3_1:51812074-51812093 | Msa0361400:intron | 30.0% | |
| AAGTTCGAAACTTGTGATAT+GGG | + | chr3_1:51812129-51812148 | Msa0361400:intron | 30.0% | |
| ! | TGATATTGGAGTTATTTCAG+AGG | - | chr3_1:51812179-51812198 | None:intergenic | 30.0% |
| AACTGTCTAACTGTATTAAC+TGG | + | chr3_1:51812429-51812448 | Msa0361400:intron | 30.0% | |
| TTGCCAATTTATTTGCTTGT+AGG | + | chr3_1:51812500-51812519 | Msa0361400:intron | 30.0% | |
| TTCGCCCAAAAATTGAAATA+GGG | - | chr3_1:51812575-51812594 | None:intergenic | 30.0% | |
| TTTCGCCCAAAAATTGAAAT+AGG | - | chr3_1:51812576-51812595 | None:intergenic | 30.0% | |
| !!! | TAAATTTTTGGTCCCCATTA+TGG | - | chr3_1:51812672-51812691 | None:intergenic | 30.0% |
| ! | GCAAGTGATGCTTATATTTT+TGG | + | chr3_1:51812703-51812722 | Msa0361400:intron | 30.0% |
| TCGAAGGATGTGAAATTAAT+TGG | - | chr3_1:51812889-51812908 | None:intergenic | 30.0% | |
| !!! | TTAGCTTTTGGTTTTTGTTC+TGG | - | chr3_1:51813091-51813110 | None:intergenic | 30.0% |
| AACCAAAAGCTAAAGAATGT+TGG | + | chr3_1:51813098-51813117 | Msa0361400:CDS | 30.0% | |
| GAATGTTGGCATTATATGAA+AGG | + | chr3_1:51813112-51813131 | Msa0361400:CDS | 30.0% | |
| TTGAGTTTATAACAACCTCA+TGG | - | chr3_1:51813144-51813163 | None:intergenic | 30.0% | |
| ATAAAGTGAAGAATAAGTCG+GGG | - | chr3_1:51813177-51813196 | None:intergenic | 30.0% | |
| CATTATACTGTTACACTAGA+CGG | + | chr3_1:51813243-51813262 | Msa0361400:intron | 30.0% | |
| ATTATACTGTTACACTAGAC+GGG | + | chr3_1:51813244-51813263 | Msa0361400:intron | 30.0% | |
| ACGACATTACAAAGAGAATT+GGG | + | chr3_1:51813282-51813301 | Msa0361400:intron | 30.0% | |
| TTCTCATATGCATTGTGTAA+TGG | - | chr3_1:51813593-51813612 | None:intergenic | 30.0% | |
| ATTTGAATTTATCTGAACCC+TGG | + | chr3_1:51813849-51813868 | Msa0361400:intron | 30.0% | |
| AAGCAAGAGAAAGTAAGAAT+TGG | - | chr3_1:51814200-51814219 | None:intergenic | 30.0% | |
| ! | GTTTTTGTTCATGTTGGAAT+TGG | - | chr3_1:51814586-51814605 | None:intergenic | 30.0% |
| AAGGTTCTGTAAATTTCTCT+TGG | - | chr3_1:51814645-51814664 | None:intergenic | 30.0% | |
| ! | GTTTTTGAATAGTAGCATAG+TGG | + | chr3_1:51814983-51815002 | Msa0361400:intron | 30.0% |
| !!! | TGAACAAACTTCTTTTTTCC+GGG | + | chr3_1:51815010-51815029 | Msa0361400:intron | 30.0% |
| ATTTACAGTGTTGTCAATTG+TGG | - | chr3_1:51815038-51815057 | None:intergenic | 30.0% | |
| ATTGACAACACTGTAAATAG+TGG | + | chr3_1:51815040-51815059 | Msa0361400:intron | 30.0% | |
| AAATGAGCTCTTTCTCATTT+AGG | + | chr3_1:51815096-51815115 | Msa0361400:intron | 30.0% | |
| !! | TAGAATTGGAGTTGTTTTGT+TGG | - | chr3_1:51815243-51815262 | None:intergenic | 30.0% |
| AGATAAAGGTCAAAATACTG+CGG | + | chr3_1:51815438-51815457 | Msa0361400:CDS | 30.0% | |
| ! | CGACTGAAATCAAGATTTTT+AGG | + | chr3_1:51815739-51815758 | Msa0361400:CDS | 30.0% |
| ATCAGTTCAAGAGGTAAATA+AGG | + | chr3_1:51815807-51815826 | Msa0361400:CDS | 30.0% | |
| GAAGATTGAAGTGAAACAAA+GGG | - | chr3_1:51815886-51815905 | None:intergenic | 30.0% | |
| TGAAGATTGAAGTGAAACAA+AGG | - | chr3_1:51815887-51815906 | None:intergenic | 30.0% | |
| CATAAACAAGCATCAAACTT+AGG | + | chr3_1:51815928-51815947 | Msa0361400:CDS | 30.0% | |
| ! | TTATTTTCCTCTGATCATAC+AGG | - | chr3_1:51816036-51816055 | None:intergenic | 30.0% |
| TGGTTATCATCCAATAAGTT+AGG | - | chr3_1:51816155-51816174 | None:intergenic | 30.0% | |
| TAACTTATTGGATGATAACC+AGG | + | chr3_1:51816154-51816173 | Msa0361400:CDS | 30.0% | |
| ATTGCTAATACGTAAATCCT+TGG | + | chr3_1:51816247-51816266 | Msa0361400:intron | 30.0% | |
| GTTACAACTCAACTTTATTG+CGG | + | chr3_1:51816374-51816393 | Msa0361400:intron | 30.0% | |
| !!! | AAATGACTTGAGTTTTGAAG+TGG | + | chr3_1:51816507-51816526 | Msa0361400:CDS | 30.0% |
| !!! | TGAGTTTTGAAGTGGTTAAT+TGG | + | chr3_1:51816515-51816534 | Msa0361400:intron | 30.0% |
| ATGCATGTACCTATTAAACT+TGG | + | chr3_1:51816559-51816578 | Msa0361400:intron | 30.0% | |
| AGAAACTAAGATCAAACAAC+TGG | - | chr3_1:51816659-51816678 | None:intergenic | 30.0% | |
| CATGTATATCACAAGATACA+AGG | - | chr3_1:51816821-51816840 | None:intergenic | 30.0% | |
| GAAATGATAGCAAATGAAAC+GGG | - | chr3_1:51816857-51816876 | None:intergenic | 30.0% | |
| CACAACAGTAGTAAAACAAG+AGG | - | chr3_1:51809298-51809317 | None:intergenic | 35.0% | |
| ATGGTGAATATACAACGACA+CGG | - | chr3_1:51809323-51809342 | None:intergenic | 35.0% | |
| TGTCGTTGTATATTCACCAT+AGG | + | chr3_1:51809323-51809342 | Msa0361400:intron | 35.0% | |
| TTGATTCTAACCTCAAGCTA+GGG | - | chr3_1:51809605-51809624 | None:intergenic | 35.0% | |
| !! | CACCTTTTAAGAGTCGATTT+TGG | + | chr3_1:51809683-51809702 | Msa0361400:intron | 35.0% |
| GTTACACTTTAGCCTATGTT+TGG | - | chr3_1:51809726-51809745 | None:intergenic | 35.0% | |
| TTTAACAGACCGTTATTGTC+TGG | + | chr3_1:51809751-51809770 | Msa0361400:intron | 35.0% | |
| CATGTATCACCAGACAATAA+CGG | - | chr3_1:51809763-51809782 | None:intergenic | 35.0% | |
| CACAGTTAGTTATACGAACA+TGG | + | chr3_1:51809890-51809909 | Msa0361400:intron | 35.0% | |
| !! | TATACGAACATGGTCTTGTT+TGG | + | chr3_1:51809900-51809919 | Msa0361400:intron | 35.0% |
| CATTGCCATTATCTTGAAAG+AGG | - | chr3_1:51810483-51810502 | None:intergenic | 35.0% | |
| ! | AGATAATGGCAATGTTGGAA+TGG | + | chr3_1:51810489-51810508 | Msa0361400:intron | 35.0% |
| ACATCATGCATTTCCTTCAA+GGG | - | chr3_1:51810595-51810614 | None:intergenic | 35.0% | |
| !! | ATTGAAAGTGTTGGAGACAA+GGG | + | chr3_1:51810625-51810644 | Msa0361400:CDS | 35.0% |
| TGATGCAGCAGAATTTCTTA+TGG | + | chr3_1:51810681-51810700 | Msa0361400:CDS | 35.0% | |
| GATGCAGCAGAATTTCTTAT+GGG | + | chr3_1:51810682-51810701 | Msa0361400:CDS | 35.0% | |
| ! | ACAGACAGATGGTTTTCATT+TGG | + | chr3_1:51810723-51810742 | Msa0361400:CDS | 35.0% |
| GATGTTCAACATGTTCTACT+CGG | - | chr3_1:51810876-51810895 | None:intergenic | 35.0% | |
| AGAGCTTAATCAACTTGACT+CGG | + | chr3_1:51810954-51810973 | Msa0361400:CDS | 35.0% | |
| AATTCACCCTCTTGAATAGT+AGG | - | chr3_1:51811117-51811136 | None:intergenic | 35.0% | |
| GCATTGAATATGACAGAAGA+TGG | + | chr3_1:51811213-51811232 | Msa0361400:CDS | 35.0% | |
| TTGAATATGACAGAAGATGG+TGG | + | chr3_1:51811216-51811235 | Msa0361400:CDS | 35.0% | |
| TCCGATATTCTGATTGAAGA+AGG | + | chr3_1:51811333-51811352 | Msa0361400:CDS | 35.0% | |
| TGAAGAAGGAGATTTAGAAG+AGG | + | chr3_1:51811347-51811366 | Msa0361400:CDS | 35.0% | |
| GAAGAAGGAGATTTAGAAGA+GGG | + | chr3_1:51811348-51811367 | Msa0361400:CDS | 35.0% | |
| TTAGAAGAGGGAGAAATTTC+TGG | + | chr3_1:51811360-51811379 | Msa0361400:CDS | 35.0% | |
| !! | TCTGGAGATTTTTCAATGGA+TGG | + | chr3_1:51811378-51811397 | Msa0361400:CDS | 35.0% |
| ATTAGATGGAAAGCCTTGAA+AGG | - | chr3_1:51811487-51811506 | None:intergenic | 35.0% | |
| GAAACCTCTATCAAAGATCA+CGG | + | chr3_1:51811582-51811601 | Msa0361400:CDS | 35.0% | |
| AAACCTCTATCAAAGATCAC+GGG | + | chr3_1:51811583-51811602 | Msa0361400:CDS | 35.0% | |
| TACTCACTACCAATGATGAA+TGG | + | chr3_1:51811705-51811724 | Msa0361400:intron | 35.0% | |
| ! | TTGCCCTATTTGAGTTTGTT+TGG | + | chr3_1:51811829-51811848 | Msa0361400:intron | 35.0% |
| ! | TGCCCTATTTGAGTTTGTTT+GGG | + | chr3_1:51811830-51811849 | Msa0361400:intron | 35.0% |
| GAAGTTCGAAACTTGTGATA+TGG | + | chr3_1:51812128-51812147 | Msa0361400:intron | 35.0% | |
| ! | AACTTGTGATATGGGTTTTG+AGG | + | chr3_1:51812137-51812156 | Msa0361400:intron | 35.0% |
| ! | TATTGGAGTTATTTCAGAGG+AGG | - | chr3_1:51812176-51812195 | None:intergenic | 35.0% |
| TAGGTTCTACATTGTTTGTG+TGG | + | chr3_1:51812300-51812319 | Msa0361400:intron | 35.0% | |
| AGGTTCTACATTGTTTGTGT+GGG | + | chr3_1:51812301-51812320 | Msa0361400:intron | 35.0% | |
| TATTGATCATTTGCAGCAGA+TGG | + | chr3_1:51812731-51812750 | Msa0361400:intron | 35.0% | |
| AGGAGAAGAAAACTAGAAAG+AGG | + | chr3_1:51812790-51812809 | Msa0361400:CDS | 35.0% | |
| GGAGAAGAAAACTAGAAAGA+GGG | + | chr3_1:51812791-51812810 | Msa0361400:CDS | 35.0% | |
| !! | AGGGCATTGATACAACATAA+AGG | - | chr3_1:51812843-51812862 | None:intergenic | 35.0% |
| ACAGAGATCTAGGTGTTAAA+AGG | + | chr3_1:51813050-51813069 | Msa0361400:CDS | 35.0% | |
| !!! | TGCCAACATTCTTTAGCTTT+TGG | - | chr3_1:51813103-51813122 | None:intergenic | 35.0% |
| GACGACATTACAAAGAGAAT+TGG | + | chr3_1:51813281-51813300 | Msa0361400:intron | 35.0% | |
| CGACATTACAAAGAGAATTG+GGG | + | chr3_1:51813283-51813302 | Msa0361400:intron | 35.0% | |
| ! | TTTCCACCATCTTTTCTACT+AGG | - | chr3_1:51813314-51813333 | None:intergenic | 35.0% |
| AAACTAGACTTAGGTGGTTT+GGG | + | chr3_1:51813331-51813350 | Msa0361400:intron | 35.0% | |
| GACATGTAGATTCTGTAGTA+AGG | + | chr3_1:51813367-51813386 | Msa0361400:intron | 35.0% | |
| AGAGTAGTCAAATCACTAGA+CGG | + | chr3_1:51813406-51813425 | Msa0361400:intron | 35.0% | |
| ! | CCACAATAAACTTGTTTCCA+GGG | - | chr3_1:51813869-51813888 | None:intergenic | 35.0% |
| ! | TCCACAATAAACTTGTTTCC+AGG | - | chr3_1:51813870-51813889 | None:intergenic | 35.0% |
| AAAACTGAAAGTTACCTCCA+GGG | + | chr3_1:51813896-51813915 | Msa0361400:intron | 35.0% | |
| AATTAGGCCTCAATATGTGT+TGG | - | chr3_1:51813927-51813946 | None:intergenic | 35.0% | |
| TATTCCTTCAACAAAGTCCA+TGG | + | chr3_1:51814270-51814289 | Msa0361400:CDS | 35.0% | |
| AATACCATGGACTTTGTTGA+AGG | - | chr3_1:51814277-51814296 | None:intergenic | 35.0% | |
| TTCAACAAAGTCCATGGTAT+TGG | + | chr3_1:51814276-51814295 | Msa0361400:intron | 35.0% | |
| ATAGGTGGCATATATTTGCA+GGG | - | chr3_1:51814357-51814376 | None:intergenic | 35.0% | |
| AATAGGTGGCATATATTTGC+AGG | - | chr3_1:51814358-51814377 | None:intergenic | 35.0% | |
| TGCAAATATATGCCACCTAT+TGG | + | chr3_1:51814357-51814376 | Msa0361400:intron | 35.0% | |
| CATGGACCAAAAGTAAAAAG+TGG | - | chr3_1:51814426-51814445 | None:intergenic | 35.0% | |
| TACAGAGTACAGACAACATA+AGG | - | chr3_1:51814524-51814543 | None:intergenic | 35.0% | |
| TCTTGAGCTGATGATCATAT+GGG | - | chr3_1:51814736-51814755 | None:intergenic | 35.0% | |
| TTCTTGAGCTGATGATCATA+TGG | - | chr3_1:51814737-51814756 | None:intergenic | 35.0% | |
| TGTGACACAAAATTGGAACA+AGG | - | chr3_1:51814764-51814783 | None:intergenic | 35.0% | |
| ! | TGTTCCAATTTTGTGTCACA+AGG | + | chr3_1:51814764-51814783 | Msa0361400:CDS | 35.0% |
| ! | TGAATGTAAGTTTTCACACC+AGG | + | chr3_1:51814805-51814824 | Msa0361400:CDS | 35.0% |
| AGTGTATCACGGAACAATAT+TGG | - | chr3_1:51814950-51814969 | None:intergenic | 35.0% | |
| TTTGTATTTCCTGACGAAAG+AGG | - | chr3_1:51815181-51815200 | None:intergenic | 35.0% | |
| AGTACACCACTGAATAATCA+TGG | + | chr3_1:51815205-51815224 | Msa0361400:CDS | 35.0% | |
| TCACACCAATGTAGAACATA+AGG | + | chr3_1:51815276-51815295 | Msa0361400:CDS | 35.0% | |
| GTCTACCTTATGTTCTACAT+TGG | - | chr3_1:51815284-51815303 | None:intergenic | 35.0% | |
| TAGTACACCAAAACAAGACA+CGG | + | chr3_1:51815372-51815391 | Msa0361400:CDS | 35.0% | |
| GGAGTCAACTTTCTTTCTTT+CGG | + | chr3_1:51815496-51815515 | Msa0361400:CDS | 35.0% | |
| AACTTTCTTTCTTTCGGCAA+AGG | + | chr3_1:51815502-51815521 | Msa0361400:CDS | 35.0% | |
| AAACCAAAATTGACTGACTG+AGG | - | chr3_1:51815589-51815608 | None:intergenic | 35.0% | |
| TTCAGTTTCACTGCTGAATA+AGG | + | chr3_1:51815618-51815637 | Msa0361400:CDS | 35.0% | |
| CTGCTGAATAAGGATGATAA+TGG | + | chr3_1:51815628-51815647 | Msa0361400:CDS | 35.0% | |
| ! | ATTTTGTGCAGTTCTATCAC+TGG | - | chr3_1:51815659-51815678 | None:intergenic | 35.0% |
| TTCAGACAAAAACCAATCCA+TGG | + | chr3_1:51815711-51815730 | Msa0361400:CDS | 35.0% | |
| ! | CCTCTTGAACTGATTTACAA+TGG | - | chr3_1:51815801-51815820 | None:intergenic | 35.0% |
| CCATTGTAAATCAGTTCAAG+AGG | + | chr3_1:51815798-51815817 | Msa0361400:CDS | 35.0% | |
| ! | TAAGGCATCTGATAATTCTC+AGG | + | chr3_1:51815825-51815844 | Msa0361400:CDS | 35.0% |
| GTTTCACTTCAATCTTCAGA+AGG | + | chr3_1:51815889-51815908 | Msa0361400:CDS | 35.0% | |
| GTTTATGACATCTGGATACT+AGG | - | chr3_1:51815915-51815934 | None:intergenic | 35.0% | |
| TGATGCTTGTTTATGACATC+TGG | - | chr3_1:51815923-51815942 | None:intergenic | 35.0% | |
| ATTAAGATGAAATGCCCTAC+TGG | + | chr3_1:51816003-51816022 | Msa0361400:CDS | 35.0% | |
| !! | AAAGGCACTTCCTAACTTAT+TGG | + | chr3_1:51816142-51816161 | Msa0361400:intron | 35.0% |
| TTATTGGATGATAACCAGGT+AGG | + | chr3_1:51816158-51816177 | Msa0361400:CDS | 35.0% | |
| TATTGGATGATAACCAGGTA+GGG | + | chr3_1:51816159-51816178 | Msa0361400:CDS | 35.0% | |
| TTATGTTTCCATTTCTCTCG+CGG | + | chr3_1:51816196-51816215 | Msa0361400:CDS | 35.0% | |
| ! | GTTATGAAGAGCATAACACA+AGG | - | chr3_1:51816329-51816348 | None:intergenic | 35.0% |
| GTGTTATGCTCTTCATAACT+CGG | + | chr3_1:51816330-51816349 | Msa0361400:intron | 35.0% | |
| AACTTTATTGCGGACATTGT+AGG | + | chr3_1:51816384-51816403 | Msa0361400:intron | 35.0% | |
| TGACAACAAATTTGCAAAGG+TGG | + | chr3_1:51816432-51816451 | Msa0361400:CDS | 35.0% | |
| ACAAGCAATATTCTTGCTTC+TGG | + | chr3_1:51816484-51816503 | Msa0361400:CDS | 35.0% | |
| AACAGCAGACCAAGTTTAAT+AGG | - | chr3_1:51816571-51816590 | None:intergenic | 35.0% | |
| AGGATATGAAAGGATGTACC+AGG | - | chr3_1:51809238-51809257 | None:intergenic | 40.0% | |
| CGTTGTATATTCACCATAGG+AGG | + | chr3_1:51809326-51809345 | Msa0361400:intron | 40.0% | |
| GGCTAAAAATTCACCTCCTA+TGG | - | chr3_1:51809342-51809361 | None:intergenic | 40.0% | |
| !!! | GAGGTGAATTTTTAGCCACT+AGG | + | chr3_1:51809345-51809364 | Msa0361400:intron | 40.0% |
| ! | GTTGATTCTAACCTCAAGCT+AGG | - | chr3_1:51809606-51809625 | None:intergenic | 40.0% |
| CTTGAGGTTAGAATCAACTC+TGG | + | chr3_1:51809608-51809627 | Msa0361400:intron | 40.0% | |
| ! | AACTCTGGAGGCAAAATCAA+TGG | + | chr3_1:51809623-51809642 | Msa0361400:intron | 40.0% |
| !!! | GATTTTGGTTGTTCCAAACG+TGG | + | chr3_1:51809698-51809717 | Msa0361400:intron | 40.0% |
| GATCACTCAATCACGAATAG+CGG | - | chr3_1:51809863-51809882 | None:intergenic | 40.0% | |
| AATCTTCATGTCTCACAGCT+AGG | + | chr3_1:51810034-51810053 | Msa0361400:intron | 40.0% | |
| ATCTTCATGTCTCACAGCTA+GGG | + | chr3_1:51810035-51810054 | Msa0361400:intron | 40.0% | |
| !! | AAAAGTTGGTGCTGATGTCA+AGG | + | chr3_1:51810552-51810571 | Msa0361400:CDS | 40.0% |
| ! | TGCATTTCCTTCAAGGGTAT+TGG | - | chr3_1:51810589-51810608 | None:intergenic | 40.0% |
| GACATCATGCATTTCCTTCA+AGG | - | chr3_1:51810596-51810615 | None:intergenic | 40.0% | |
| CAACACTTTCAATGGTCTCA+TGG | - | chr3_1:51810618-51810637 | None:intergenic | 40.0% | |
| ! | CATGAGACCATTGAAAGTGT+TGG | + | chr3_1:51810616-51810635 | Msa0361400:CDS | 40.0% |
| CTTGTCTCCAACACTTTCAA+TGG | - | chr3_1:51810626-51810645 | None:intergenic | 40.0% | |
| !! | CATTGAAAGTGTTGGAGACA+AGG | + | chr3_1:51810624-51810643 | Msa0361400:CDS | 40.0% |
| ! | ATCATCTAGGACCATAGCAT+TGG | - | chr3_1:51810665-51810684 | None:intergenic | 40.0% |
| GAAATTCTGCTGCATCATCT+AGG | - | chr3_1:51810678-51810697 | None:intergenic | 40.0% | |
| AAACCATCTGTCTGTGTAGA+CGG | - | chr3_1:51810718-51810737 | None:intergenic | 40.0% | |
| !! | ACAGATGATAATGGACGAGT+TGG | + | chr3_1:51810747-51810766 | Msa0361400:CDS | 40.0% |
| !! | AGTTGGAGCTTGTTGTGAAA+GGG | + | chr3_1:51810764-51810783 | Msa0361400:CDS | 40.0% |
| ! | ATTCTGTTTCTCGCAGTTCA+GGG | - | chr3_1:51810824-51810843 | None:intergenic | 40.0% |
| ! | TATTCTGTTTCTCGCAGTTC+AGG | - | chr3_1:51810825-51810844 | None:intergenic | 40.0% |
| AACTGCGAGAAACAGAATAG+CGG | + | chr3_1:51810826-51810845 | Msa0361400:CDS | 40.0% | |
| !! | CGGTAGTGAAGTTGATTTGA+TGG | + | chr3_1:51810846-51810865 | Msa0361400:CDS | 40.0% |
| !! | CTTAATCAACTTGACTCGGA+AGG | + | chr3_1:51810958-51810977 | Msa0361400:CDS | 40.0% |
| ! | GGAAACAGAATTGGTAACAC+TGG | + | chr3_1:51811068-51811087 | Msa0361400:CDS | 40.0% |
| TCAAGAGGGTGAATTTGAGA+AGG | + | chr3_1:51811122-51811141 | Msa0361400:CDS | 40.0% | |
| TTTGAGAAGGAAGAACAGAG+TGG | + | chr3_1:51811135-51811154 | Msa0361400:CDS | 40.0% | |
| CACATTTGATGTGTCTTCTG+CGG | + | chr3_1:51811404-51811423 | Msa0361400:CDS | 40.0% | |
| !! | AAGGAGATACCCGTTTTGAA+AGG | - | chr3_1:51811468-51811487 | None:intergenic | 40.0% |
| AAAACGGGTATCTCCTTTCA+AGG | + | chr3_1:51811471-51811490 | Msa0361400:CDS | 40.0% | |
| AGTCTTGCACAAAGGATTCA+TGG | + | chr3_1:51811557-51811576 | Msa0361400:CDS | 40.0% | |
| ACTCATCTGTAGTACAGGTA+TGG | + | chr3_1:51811607-51811626 | Msa0361400:intron | 40.0% | |
| CTCATCTGTAGTACAGGTAT+GGG | + | chr3_1:51811608-51811627 | Msa0361400:intron | 40.0% | |
| TACAGTTAGACAGTTACGCA+CGG | - | chr3_1:51812424-51812443 | None:intergenic | 40.0% | |
| TACGGTCAACCAAATCCTTA+AGG | + | chr3_1:51812630-51812649 | Msa0361400:intron | 40.0% | |
| CAATGTTGAAACGACTTCGA+AGG | - | chr3_1:51812905-51812924 | None:intergenic | 40.0% | |
| CTTCGAAGTCGTTTCAACAT+TGG | + | chr3_1:51812903-51812922 | Msa0361400:intron | 40.0% | |
| GCAGAAAAGAACAGAGATCT+AGG | + | chr3_1:51813040-51813059 | Msa0361400:CDS | 40.0% | |
| !!! | GCTTTTGGTTTTTGTTCTGG+AGG | - | chr3_1:51813088-51813107 | None:intergenic | 40.0% |
| TATGAAAGGAAGATGCCATG+AGG | + | chr3_1:51813126-51813145 | Msa0361400:CDS | 40.0% | |
| GTAGCACCTAGTAGAAAAGA+TGG | + | chr3_1:51813305-51813324 | Msa0361400:intron | 40.0% | |
| !! | AGATGGTGGAAACTAGACTT+AGG | + | chr3_1:51813322-51813341 | Msa0361400:intron | 40.0% |
| GAAACTAGACTTAGGTGGTT+TGG | + | chr3_1:51813330-51813349 | Msa0361400:intron | 40.0% | |
| AGTAAGGAGAGTAGATCACA+TGG | + | chr3_1:51813383-51813402 | Msa0361400:intron | 40.0% | |
| CTTATCCAACTAAGTGGAGT+CGG | - | chr3_1:51813545-51813564 | None:intergenic | 40.0% | |
| CCCTGGAAACAAGTTTATTG+TGG | + | chr3_1:51813866-51813885 | Msa0361400:intron | 40.0% | |
| GAAAACTGAAAGTTACCTCC+AGG | + | chr3_1:51813895-51813914 | Msa0361400:intron | 40.0% | |
| AGATCTTGATGAGGTAACCA+GGG | - | chr3_1:51814101-51814120 | None:intergenic | 40.0% | |
| ACAGATTGCAGATCTTGATG+AGG | - | chr3_1:51814110-51814129 | None:intergenic | 40.0% | |
| TTGTCTGTACTCTGTACTAG+AGG | + | chr3_1:51814528-51814547 | Msa0361400:intron | 40.0% | |
| TGTCTGTACTCTGTACTAGA+GGG | + | chr3_1:51814529-51814548 | Msa0361400:intron | 40.0% | |
| CTTGTGGCTCTTGTATGAAA+GGG | + | chr3_1:51814702-51814721 | Msa0361400:CDS | 40.0% | |
| TTGTAGGCGTAGGTATATCT+TGG | - | chr3_1:51815132-51815151 | None:intergenic | 40.0% | |
| ! | TCTGGTTTGCAAGCATTTGT+AGG | - | chr3_1:51815148-51815167 | None:intergenic | 40.0% |
| !!! | GTGTCTTGTTTTGGTGTACT+AGG | - | chr3_1:51815373-51815392 | None:intergenic | 40.0% |
| TGGACAAGATTTCCCTTGTT+TGG | - | chr3_1:51815403-51815422 | None:intergenic | 40.0% | |
| AGTGGAACATGTGCAGATAA+AGG | + | chr3_1:51815424-51815443 | Msa0361400:CDS | 40.0% | |
| ! | GAAAGAAAGTTGACTCCCTT+GGG | - | chr3_1:51815493-51815512 | None:intergenic | 40.0% |
| ! | AGAAAGAAAGTTGACTCCCT+TGG | - | chr3_1:51815494-51815513 | None:intergenic | 40.0% |
| CAATATCATTCCTTCTGCAG+TGG | - | chr3_1:51815560-51815579 | None:intergenic | 40.0% | |
| ! | TTGCCTCAGTCAGTCAATTT+TGG | + | chr3_1:51815583-51815602 | Msa0361400:CDS | 40.0% |
| ATTCAGCTGATGATTCTGTG+AGG | + | chr3_1:51815767-51815786 | Msa0361400:CDS | 40.0% | |
| TTCAGCTGATGATTCTGTGA+GGG | + | chr3_1:51815768-51815787 | Msa0361400:CDS | 40.0% | |
| AAGCATCAAACTTAGGCCAA+AGG | + | chr3_1:51815935-51815954 | Msa0361400:CDS | 40.0% | |
| AGCATCAAACTTAGGCCAAA+GGG | + | chr3_1:51815936-51815955 | Msa0361400:CDS | 40.0% | |
| AAGTCGAAATGAATGCCCTT+TGG | - | chr3_1:51815954-51815973 | None:intergenic | 40.0% | |
| !!! | TTCGACTTTAGCTTTTGCAG+CGG | + | chr3_1:51815966-51815985 | Msa0361400:CDS | 40.0% |
| AAATCAATCCATGAAGCTCC+TGG | + | chr3_1:51816108-51816127 | Msa0361400:intron | 40.0% | |
| CTCCTGGTGATTTGAATCAA+AGG | + | chr3_1:51816124-51816143 | Msa0361400:intron | 40.0% | |
| TGCCTTTGATTCAAATCACC+AGG | - | chr3_1:51816129-51816148 | None:intergenic | 40.0% | |
| ATTGGATGATAACCAGGTAG+GGG | + | chr3_1:51816160-51816179 | Msa0361400:CDS | 40.0% | |
| GCAGGTAACTTTGAGCAAAT+TGG | + | chr3_1:51816597-51816616 | Msa0361400:intron | 40.0% | |
| !! | TTGAGTTGAAACCGTGGAAG+GGG | - | chr3_1:51809200-51809219 | None:intergenic | 45.0% |
| !! | GTTGAGTTGAAACCGTGGAA+GGG | - | chr3_1:51809201-51809220 | None:intergenic | 45.0% |
| !! | TGTTGAGTTGAAACCGTGGA+AGG | - | chr3_1:51809202-51809221 | None:intergenic | 45.0% |
| AAGCGATAAACCCTAGCTTG+AGG | + | chr3_1:51809592-51809611 | Msa0361400:intron | 45.0% | |
| GAGGTTAGAATCAACTCTGG+AGG | + | chr3_1:51809611-51809630 | Msa0361400:intron | 45.0% | |
| GGAGGCAAAATCAATGGTAC+TGG | + | chr3_1:51809629-51809648 | Msa0361400:intron | 45.0% | |
| ! | CCTATGTTTGGTTCCACGTT+TGG | - | chr3_1:51809714-51809733 | None:intergenic | 45.0% |
| CCAAACGTGGAACCAAACAT+AGG | + | chr3_1:51809711-51809730 | Msa0361400:intron | 45.0% | |
| GTTCAAAATGGCGGCTATAG+TGG | + | chr3_1:51809801-51809820 | Msa0361400:intron | 45.0% | |
| TAACTGTGCGAGCAGAATAC+TGG | - | chr3_1:51809936-51809955 | None:intergenic | 45.0% | |
| ATTCTGCTCGCACAGTTACA+AGG | + | chr3_1:51809938-51809957 | Msa0361400:intron | 45.0% | |
| TGGAATGGAGCAAGAAAACC+AGG | + | chr3_1:51810504-51810523 | Msa0361400:CDS | 45.0% | |
| GGAGCAAGAAAACCAGGAAA+AGG | + | chr3_1:51810510-51810529 | Msa0361400:CDS | 45.0% | |
| !! | TTCAAGGGTATTGGACCCTT+GGG | - | chr3_1:51810580-51810599 | None:intergenic | 45.0% |
| GGATTTGAGTGCCAATGCTA+TGG | + | chr3_1:51810651-51810670 | Msa0361400:CDS | 45.0% | |
| !! | GAGTTGGAGCTTGTTGTGAA+AGG | + | chr3_1:51810763-51810782 | Msa0361400:CDS | 45.0% |
| !! | GTTGGAGCTTGTTGTGAAAG+GGG | + | chr3_1:51810765-51810784 | Msa0361400:CDS | 45.0% |
| ! | TTCTGTTTCTCGCAGTTCAG+GGG | - | chr3_1:51810823-51810842 | None:intergenic | 45.0% |
| CATGTTGAACATCTGCGTTC+TGG | + | chr3_1:51810883-51810902 | Msa0361400:CDS | 45.0% | |
| ! | CACGTCTGAAAGTGTAAGTG+AGG | + | chr3_1:51810912-51810931 | Msa0361400:CDS | 45.0% |
| TCATGTGTCCGAGTCAACAA+AGG | + | chr3_1:51810984-51811003 | Msa0361400:CDS | 45.0% | |
| CATGTGTCCGAGTCAACAAA+GGG | + | chr3_1:51810985-51811004 | Msa0361400:CDS | 45.0% | |
| GTAGGAAGATATCCTGCTAG+AGG | - | chr3_1:51811099-51811118 | None:intergenic | 45.0% | |
| GGAAGAACAGAGTGGACATA+AGG | + | chr3_1:51811143-51811162 | Msa0361400:CDS | 45.0% | |
| !! | GACAGAAGATGGTGGATTAC+TGG | + | chr3_1:51811224-51811243 | Msa0361400:CDS | 45.0% |
| GTTCCCGTGATCTTTGATAG+AGG | - | chr3_1:51811589-51811608 | None:intergenic | 45.0% | |
| ACATAGGATGCCGAAGGATA+TGG | - | chr3_1:51811904-51811923 | None:intergenic | 45.0% | |
| AACTCTACATAGGATGCCGA+AGG | - | chr3_1:51811910-51811929 | None:intergenic | 45.0% | |
| ACCACTTTGTTCCTTTCTGC+TGG | - | chr3_1:51812026-51812045 | None:intergenic | 45.0% | |
| GCGATAAGAATGACCACAGT+AGG | + | chr3_1:51812377-51812396 | Msa0361400:intron | 45.0% | |
| CTAGTGTGACATTCCTACTG+TGG | - | chr3_1:51812393-51812412 | None:intergenic | 45.0% | |
| ! | GTTTTCTTCTCCTGAGAACC+AGG | - | chr3_1:51812783-51812802 | None:intergenic | 45.0% |
| !! | TGTTCTGGAGGCTGAAACTT+GGG | - | chr3_1:51813076-51813095 | None:intergenic | 45.0% |
| !! | TTGTTCTGGAGGCTGAAACT+TGG | - | chr3_1:51813077-51813096 | None:intergenic | 45.0% |
| ACTGTTACACTAGACGGGAT+AGG | + | chr3_1:51813249-51813268 | Msa0361400:intron | 45.0% | |
| GCACCTAGTAGAAAAGATGG+TGG | + | chr3_1:51813308-51813327 | Msa0361400:intron | 45.0% | |
| TGGTGGAAACTAGACTTAGG+TGG | + | chr3_1:51813325-51813344 | Msa0361400:intron | 45.0% | |
| AGTCAAATCACTAGACGGAG+TGG | + | chr3_1:51813411-51813430 | Msa0361400:intron | 45.0% | |
| CGACTCCACTTAGTTGGATA+AGG | + | chr3_1:51813543-51813562 | Msa0361400:intron | 45.0% | |
| ! | CCAAGCCTTATCCAACTAAG+TGG | - | chr3_1:51813551-51813570 | None:intergenic | 45.0% |
| CCACTTAGTTGGATAAGGCT+TGG | + | chr3_1:51813548-51813567 | Msa0361400:intron | 45.0% | |
| CGGAAATCTTCTGACATGAC+AGG | - | chr3_1:51813771-51813790 | None:intergenic | 45.0% | |
| !! | GGCCTCAATATGTGTTGGTT+CGG | - | chr3_1:51813922-51813941 | None:intergenic | 45.0% |
| CAGATCTTGATGAGGTAACC+AGG | - | chr3_1:51814102-51814121 | None:intergenic | 45.0% | |
| TTACCGGGGCTAAAACCAAT+AGG | - | chr3_1:51814375-51814394 | None:intergenic | 45.0% | |
| TCATACAAGAGCCACAAGCA+TGG | - | chr3_1:51814700-51814719 | None:intergenic | 45.0% | |
| GCTTGTGGCTCTTGTATGAA+AGG | + | chr3_1:51814701-51814720 | Msa0361400:CDS | 45.0% | |
| ! | GGAGCCTTGTGACACAAAAT+TGG | - | chr3_1:51814771-51814790 | None:intergenic | 45.0% |
| ACATTCACCACCTCTACAAC+AGG | - | chr3_1:51814792-51814811 | None:intergenic | 45.0% | |
| GTTGAATAGGATGTCGTACC+TGG | - | chr3_1:51814826-51814845 | None:intergenic | 45.0% | |
| GTGTTGTCAATTGTGGATCC+CGG | - | chr3_1:51815031-51815050 | None:intergenic | 45.0% | |
| TTGCAAGCATTTGTAGGCGT+AGG | - | chr3_1:51815142-51815161 | None:intergenic | 45.0% | |
| GAAAGAGGAGACTTCAACTC+TGG | - | chr3_1:51815166-51815185 | None:intergenic | 45.0% | |
| TTGAAGTCTCCTCTTTCGTC+AGG | + | chr3_1:51815169-51815188 | Msa0361400:CDS | 45.0% | |
| CCAGTGCCATGATTATTCAG+TGG | - | chr3_1:51815214-51815233 | None:intergenic | 45.0% | |
| CCACTGAATAATCATGGCAC+TGG | + | chr3_1:51815211-51815230 | Msa0361400:CDS | 45.0% | |
| ! | TCTAATTCCTTTGGGTGCTG+AGG | - | chr3_1:51815326-51815345 | None:intergenic | 45.0% |
| !!! | GGTTGTACCGTGTCTTGTTT+TGG | - | chr3_1:51815382-51815401 | None:intergenic | 45.0% |
| AGACACGGTACAACCAAACA+AGG | + | chr3_1:51815387-51815406 | Msa0361400:CDS | 45.0% | |
| GACACGGTACAACCAAACAA+GGG | + | chr3_1:51815388-51815407 | Msa0361400:CDS | 45.0% | |
| AAGGGAAATCTTGTCCACAG+TGG | + | chr3_1:51815406-51815425 | Msa0361400:CDS | 45.0% | |
| TATCTGCACATGTTCCACTG+TGG | - | chr3_1:51815423-51815442 | None:intergenic | 45.0% | |
| TCTATTCACTCCACTGCAGA+AGG | + | chr3_1:51815547-51815566 | Msa0361400:CDS | 45.0% | |
| TGTGAGAATAGCGCAGTTTG+TGG | - | chr3_1:51815685-51815704 | None:intergenic | 45.0% | |
| TGATTTCAGTCGTTCTGCCA+TGG | - | chr3_1:51815731-51815750 | None:intergenic | 45.0% | |
| ! | ATACAGGTGAAGCACCAGTA+GGG | - | chr3_1:51816020-51816039 | None:intergenic | 45.0% |
| TGCTTCACCTGTATGATCAG+AGG | + | chr3_1:51816026-51816045 | Msa0361400:intron | 45.0% | |
| TCAAATCACCAGGAGCTTCA+TGG | - | chr3_1:51816119-51816138 | None:intergenic | 45.0% | |
| TTGGATGATAACCAGGTAGG+GGG | + | chr3_1:51816161-51816180 | Msa0361400:CDS | 45.0% | |
| AAACTAAACATCCCCCTACC+TGG | - | chr3_1:51816175-51816194 | None:intergenic | 45.0% | |
| TTTCCATTTCTCTCGCGGTA+TGG | + | chr3_1:51816201-51816220 | Msa0361400:CDS | 45.0% | |
| GTAAGTGACTGACAGGTAGA+TGG | - | chr3_1:51816464-51816483 | None:intergenic | 45.0% | |
| TGCTTGTGTAAGTGACTGAC+AGG | - | chr3_1:51816471-51816490 | None:intergenic | 45.0% | |
| !! | AATATATTAAAAATTACATA+AGG | - | chr3_1:51811811-51811830 | None:intergenic | 5.0% |
| !!! | CATTAAAATTATTAAATTTT+TGG | - | chr3_1:51812684-51812703 | None:intergenic | 5.0% |
| !! | ATAATTGTATATTTATTAAT+TGG | + | chr3_1:51813657-51813676 | Msa0361400:intron | 5.0% |
| ! | GGTAAGGAGGGAAAGGCATA+GGG | - | chr3_1:51809117-51809136 | None:intergenic | 50.0% |
| AGTGAGATCGACGGTAAGGA+GGG | - | chr3_1:51809129-51809148 | None:intergenic | 50.0% | |
| AAGTGAGATCGACGGTAAGG+AGG | - | chr3_1:51809130-51809149 | None:intergenic | 50.0% | |
| GGGTGGTGTAAGTATGACTG+CGG | - | chr3_1:51809153-51809172 | None:intergenic | 50.0% | |
| GTGGGTGAGAATACGGAGAA+GGG | - | chr3_1:51809173-51809192 | None:intergenic | 50.0% | |
| GGGAAAGGTGGGTGAGAATA+CGG | - | chr3_1:51809180-51809199 | None:intergenic | 50.0% | |
| TTGAAACCGTGGAAGGGGAA+AGG | - | chr3_1:51809195-51809214 | None:intergenic | 50.0% | |
| !! | GGGTTGTTGAGTTGAAACCG+TGG | - | chr3_1:51809206-51809225 | None:intergenic | 50.0% |
| ATGTCTCACAGCTAGGGTTG+TGG | + | chr3_1:51810041-51810060 | Msa0361400:intron | 50.0% | |
| ! | AGTTCTCAGGCTCCTTTTCC+TGG | - | chr3_1:51810525-51810544 | None:intergenic | 50.0% |
| TGCTGATGTCAAGGATCCCA+AGG | + | chr3_1:51810561-51810580 | Msa0361400:CDS | 50.0% | |
| GCTGATGTCAAGGATCCCAA+GGG | + | chr3_1:51810562-51810581 | Msa0361400:CDS | 50.0% | |
| !! | CTTCAAGGGTATTGGACCCT+TGG | - | chr3_1:51810581-51810600 | None:intergenic | 50.0% |
| CAAGGGTCCAATACCCTTGA+AGG | + | chr3_1:51810579-51810598 | Msa0361400:CDS | 50.0% | |
| !! | AAGTGTTGGAGACAAGGGCA+AGG | + | chr3_1:51810630-51810649 | Msa0361400:CDS | 50.0% |
| GAACCGTCTACACAGACAGA+TGG | + | chr3_1:51810712-51810731 | Msa0361400:CDS | 50.0% | |
| ! | TCTGTTTCTCGCAGTTCAGG+GGG | - | chr3_1:51810822-51810841 | None:intergenic | 50.0% |
| ! | AGCGTGTCCCTTTGTTGACT+CGG | - | chr3_1:51810995-51811014 | None:intergenic | 50.0% |
| !! | ACACTGGTTTGTCCTCTAGC+AGG | + | chr3_1:51811084-51811103 | Msa0361400:CDS | 50.0% |
| CGGGAACTCATCTGTAGTAC+AGG | + | chr3_1:51811602-51811621 | Msa0361400:CDS | 50.0% | |
| !! | GAGTGTTGATGCCAGCAGAA+AGG | + | chr3_1:51812012-51812031 | Msa0361400:CDS | 50.0% |
| GCCAGCAGAAAGGAACAAAG+TGG | + | chr3_1:51812022-51812041 | Msa0361400:CDS | 50.0% | |
| ! | AGCAGATGGTTGATGCCAGT+GGG | + | chr3_1:51812745-51812764 | Msa0361400:intron | 50.0% |
| ACTAAGTGGAGTCGGCTACA+TGG | - | chr3_1:51813537-51813556 | None:intergenic | 50.0% | |
| ! | TGTAGCCGACTCCACTTAGT+TGG | + | chr3_1:51813537-51813556 | Msa0361400:intron | 50.0% |
| !! | AATATGTGTTGGTTCGGCCC+TGG | - | chr3_1:51813916-51813935 | None:intergenic | 50.0% |
| GGCCGAACCAACACATATTG+AGG | + | chr3_1:51813917-51813936 | Msa0361400:intron | 50.0% | |
| CTTGATGAGGTAACCAGGGT+CGG | - | chr3_1:51814097-51814116 | None:intergenic | 50.0% | |
| !!! | CCACCTATTGGTTTTAGCCC+CGG | + | chr3_1:51814369-51814388 | Msa0361400:intron | 50.0% |
| CCACAAGCATGGTGAGTACA+TGG | - | chr3_1:51814689-51814708 | None:intergenic | 50.0% | |
| CCATGTACTCACCATGCTTG+TGG | + | chr3_1:51814686-51814705 | Msa0361400:CDS | 50.0% | |
| TCACAAGGCTCCTGTTGTAG+AGG | + | chr3_1:51814779-51814798 | Msa0361400:CDS | 50.0% | |
| AGGCGTAGGTATATCTTGGC+TGG | - | chr3_1:51815128-51815147 | None:intergenic | 50.0% | |
| !! | ATTCCTTTGGGTGCTGAGGT+AGG | - | chr3_1:51815322-51815341 | None:intergenic | 50.0% |
| TATTCCAGCTGTCATGCCCA+AGG | + | chr3_1:51815474-51815493 | Msa0361400:CDS | 50.0% | |
| ATTCCAGCTGTCATGCCCAA+GGG | + | chr3_1:51815475-51815494 | Msa0361400:CDS | 50.0% | |
| TCAGTCGTTCTGCCATGGAT+TGG | - | chr3_1:51815726-51815745 | None:intergenic | 50.0% | |
| ! | ACTAGCAAGAAGCGTAGCTG+AGG | - | chr3_1:51815863-51815882 | None:intergenic | 50.0% |
| ! | CATACAGGTGAAGCACCAGT+AGG | - | chr3_1:51816021-51816040 | None:intergenic | 50.0% |
| CAACCATACCGCGAGAGAAA+TGG | - | chr3_1:51816207-51816226 | None:intergenic | 50.0% | |
| ! | CGGTAAGGAGGGAAAGGCAT+AGG | - | chr3_1:51809118-51809137 | None:intergenic | 55.0% |
| GATCGACGGTAAGGAGGGAA+AGG | - | chr3_1:51809124-51809143 | None:intergenic | 55.0% | |
| CGGAAGTGAGATCGACGGTA+AGG | - | chr3_1:51809133-51809152 | None:intergenic | 55.0% | |
| GACTGCGGAAGTGAGATCGA+CGG | - | chr3_1:51809138-51809157 | None:intergenic | 55.0% | |
| GGTGAGAATACGGAGAAGGG+TGG | - | chr3_1:51809170-51809189 | None:intergenic | 55.0% | |
| GGTGGGTGAGAATACGGAGA+AGG | - | chr3_1:51809174-51809193 | None:intergenic | 55.0% | |
| AACCGTGGAAGGGGAAAGGT+GGG | - | chr3_1:51809191-51809210 | None:intergenic | 55.0% | |
| AAACCGTGGAAGGGGAAAGG+TGG | - | chr3_1:51809192-51809211 | None:intergenic | 55.0% | |
| GATGTACCAGGAACGTCGAG+GGG | - | chr3_1:51809226-51809245 | None:intergenic | 55.0% | |
| GGATGTACCAGGAACGTCGA+GGG | - | chr3_1:51809227-51809246 | None:intergenic | 55.0% | |
| AGGATGTACCAGGAACGTCG+AGG | - | chr3_1:51809228-51809247 | None:intergenic | 55.0% | |
| GAGGTGCAGTCGCAAGTACA+AGG | + | chr3_1:51810931-51810950 | Msa0361400:CDS | 55.0% | |
| ! | CAGCAGATGGTTGATGCCAG+TGG | + | chr3_1:51812744-51812763 | Msa0361400:intron | 55.0% |
| TGCCTTGCTTGCCTTACCCT+TGG | + | chr3_1:51814070-51814089 | Msa0361400:intron | 55.0% | |
| GCCTTGCTTGCCTTACCCTT+GGG | + | chr3_1:51814071-51814090 | Msa0361400:intron | 55.0% | |
| CCGGGGCTAAAACCAATAGG+TGG | - | chr3_1:51814372-51814391 | None:intergenic | 55.0% | |
| CAAGGCTCCTGTTGTAGAGG+TGG | + | chr3_1:51814782-51814801 | Msa0361400:CDS | 55.0% | |
| AAGCCTACCTCAGCACCCAA+AGG | + | chr3_1:51815316-51815335 | Msa0361400:CDS | 55.0% | |
| TTCTCTCGCGGTATGGTTGC+AGG | + | chr3_1:51816208-51816227 | Msa0361400:CDS | 55.0% | |
| ! | TGGTCTGCTGTTGCTTGTGC+AGG | + | chr3_1:51816579-51816598 | Msa0361400:intron | 55.0% |
| CACCCACCTTTCCCCTTCCA+CGG | + | chr3_1:51809186-51809205 | Msa0361400:CDS | 60.0% | |
| CAACAACCCCTCGACGTTCC+TGG | + | chr3_1:51809217-51809236 | Msa0361400:CDS | 60.0% | |
| ! | CAAGCGTGGTCCTGGTTCTC+AGG | + | chr3_1:51812770-51812789 | Msa0361400:CDS | 60.0% |
| !! | ATGTGTTGGTTCGGCCCTGG+AGG | - | chr3_1:51813913-51813932 | None:intergenic | 60.0% |
| GCCCAAGGGTAAGGCAAGCA+AGG | - | chr3_1:51814075-51814094 | None:intergenic | 60.0% | |
| ACTCCCTTGGGCATGACAGC+TGG | - | chr3_1:51815481-51815500 | None:intergenic | 60.0% | |
| GATGCCAGTGGGAGCAAGCG+TGG | + | chr3_1:51812756-51812775 | Msa0361400:CDS | 65.0% | |
| AGGACCACGCTTGCTCCCAC+TGG | - | chr3_1:51812763-51812782 | None:intergenic | 65.0% | |
| AGTGGGAGCAAGCGTGGTCC+TGG | + | chr3_1:51812762-51812781 | Msa0361400:CDS | 65.0% | |
| GGTAACCAGGGTCGGCCCAA+GGG | - | chr3_1:51814089-51814108 | None:intergenic | 65.0% | |
| AGGTAACCAGGGTCGGCCCA+AGG | - | chr3_1:51814090-51814109 | None:intergenic | 65.0% | |
| CCAGGGTCGGCCCAAGGGTA+AGG | - | chr3_1:51814084-51814103 | None:intergenic | 70.0% | |
| CCTTACCCTTGGGCCGACCC+TGG | + | chr3_1:51814081-51814100 | Msa0361400:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 51808997 | 51816885 | 51808997 | ID=Msa0361400;Name=Msa0361400 |
| chr3_1 | mRNA | 51808997 | 51816885 | 51808997 | ID=Msa0361400-mRNA-1;Parent=Msa0361400;Name=Msa0361400-mRNA-1;_AED=0.08;_eAED=0.08;_QI=101|0.63|0.75|1|0.90|0.83|12|255|953 |
| chr3_1 | exon | 51808997 | 51809068 | 51808997 | ID=Msa0361400-mRNA-1:exon:9272;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51809089 | 51809238 | 51809089 | ID=Msa0361400-mRNA-1:exon:9273;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51810491 | 51811623 | 51810491 | ID=Msa0361400-mRNA-1:exon:9274;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51812010 | 51812075 | 51812010 | ID=Msa0361400-mRNA-1:exon:9275;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51812747 | 51812812 | 51812747 | ID=Msa0361400-mRNA-1:exon:9276;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51813019 | 51813147 | 51813019 | ID=Msa0361400-mRNA-1:exon:9277;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51814241 | 51814291 | 51814241 | ID=Msa0361400-mRNA-1:exon:9278;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51814686 | 51814826 | 51814686 | ID=Msa0361400-mRNA-1:exon:9279;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51815118 | 51816035 | 51815118 | ID=Msa0361400-mRNA-1:exon:9280;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51816146 | 51816229 | 51816146 | ID=Msa0361400-mRNA-1:exon:9281;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51816406 | 51816528 | 51816406 | ID=Msa0361400-mRNA-1:exon:9282;Parent=Msa0361400-mRNA-1 |
| chr3_1 | exon | 51816601 | 51816885 | 51816601 | ID=Msa0361400-mRNA-1:exon:9283;Parent=Msa0361400-mRNA-1 |
| chr3_1 | five_prime_UTR | 51808997 | 51809068 | 51808997 | ID=Msa0361400-mRNA-1:five_prime_utr;Parent=Msa0361400-mRNA-1 |
| chr3_1 | five_prime_UTR | 51809089 | 51809117 | 51809089 | ID=Msa0361400-mRNA-1:five_prime_utr;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51809118 | 51809238 | 51809118 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51810491 | 51811623 | 51810491 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51812010 | 51812075 | 51812010 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51812747 | 51812812 | 51812747 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51813019 | 51813147 | 51813019 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51814241 | 51814291 | 51814241 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51814686 | 51814826 | 51814686 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51815118 | 51816035 | 51815118 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51816146 | 51816229 | 51816146 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51816406 | 51816528 | 51816406 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | CDS | 51816601 | 51816630 | 51816601 | ID=Msa0361400-mRNA-1:cds;Parent=Msa0361400-mRNA-1 |
| chr3_1 | three_prime_UTR | 51816631 | 51816885 | 51816631 | ID=Msa0361400-mRNA-1:three_prime_utr;Parent=Msa0361400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
