AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0362150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362150 MtrunA17_Chr3g0101131 97.479 595 15 0 1 595 1 595 0.0 1204
Msa0362150 MtrunA17_Chr5g0445311 66.955 578 138 8 24 595 15 545 0.0 746
Msa0362150 MtrunA17_Chr3g0079691 43.992 491 191 15 60 492 109 573 1.10e-102 326
Msa0362150 MtrunA17_Chr5g0432161 43.059 425 204 10 64 477 86 483 5.80e-89 286
Msa0362150 MtrunA17_Chr5g0432161 52.113 71 20 2 243 299 421 491 1.71e-13 73.6
Msa0362150 MtrunA17_Chr3g0106491 41.958 429 182 9 58 477 57 427 2.28e-87 280
Msa0362150 MtrunA17_Chr7g0218081 47.352 321 143 5 206 508 191 503 4.55e-87 280
Msa0362150 MtrunA17_Chr7g0249311 52.249 289 93 8 236 481 172 458 1.07e-81 270
Msa0362150 MtrunA17_Chr5g0418191 52.874 261 108 4 235 489 143 394 1.25e-80 260
Msa0362150 MtrunA17_Chr7g0243891 41.538 455 200 14 40 477 31 436 2.26e-78 258
Msa0362150 MtrunA17_Chr4g0042831 50.000 258 82 6 236 489 138 352 7.48e-75 244
Msa0362150 MtrunA17_Chr4g0042831 43.678 87 49 0 415 501 145 231 1.87e-13 72.4
Msa0362150 MtrunA17_Chr4g0004911 53.138 239 90 5 240 477 181 398 6.46e-73 242
Msa0362150 MtrunA17_Chr7g0249301 45.485 299 105 6 237 477 56 354 8.77e-71 233
Msa0362150 MtrunA17_Chr7g0263531 50.407 246 104 6 238 474 184 420 1.76e-69 231
Msa0362150 MtrunA17_Chr5g0447701 42.857 252 114 6 235 477 84 314 1.86e-54 189
Msa0362150 MtrunA17_Chr5g0447701 45.946 74 39 1 413 486 90 162 1.37e-12 69.7
Msa0362150 MtrunA17_Chr4g0074001 42.562 242 132 5 242 478 185 424 3.66e-49 178
Msa0362150 MtrunA17_Chr1g0188941 70.130 77 23 0 399 475 35 111 6.19e-34 125
Msa0362150 MtrunA17_Chr1g0188941 51.613 62 29 1 243 303 51 112 3.22e-16 75.1
Msa0362150 MtrunA17_Chr5g0447711 32.258 248 143 3 235 482 75 297 1.01e-33 130
Msa0362150 MtrunA17_Chr8g0335811 62.821 78 29 0 394 471 133 210 2.62e-29 115
Msa0362150 MtrunA17_Chr8g0335811 59.649 57 22 1 243 298 154 210 2.19e-15 75.9
Msa0362150 MtrunA17_Chr3g0129361 62.162 74 28 0 398 471 127 200 7.10e-29 114
Msa0362150 MtrunA17_Chr3g0129361 56.140 57 24 1 243 298 144 200 2.95e-14 72.4
Msa0362150 MtrunA17_Chr4g0051881 61.364 88 33 1 401 487 164 251 2.17e-28 116
Msa0362150 MtrunA17_Chr4g0051881 48.101 79 35 2 243 315 178 256 5.48e-15 76.6
Msa0362150 MtrunA17_Chr8g0383351 62.667 75 27 1 398 471 142 216 5.80e-28 112
Msa0362150 MtrunA17_Chr8g0383351 56.140 57 24 1 243 298 160 216 1.96e-14 73.2
Msa0362150 MtrunA17_Chr7g0270191 58.621 87 36 0 399 485 129 215 6.90e-28 114
Msa0362150 MtrunA17_Chr7g0270191 57.812 64 26 1 243 305 145 208 1.60e-15 77.4
Msa0362150 MtrunA17_Chr1g0194481 61.728 81 31 0 395 475 138 218 1.08e-27 114
Msa0362150 MtrunA17_Chr1g0194481 56.522 69 28 2 243 309 158 226 1.83e-16 80.9
Msa0362150 MtrunA17_Chr5g0418781 64.474 76 27 0 396 471 105 180 2.57e-27 111
Msa0362150 MtrunA17_Chr5g0418781 59.649 57 22 1 243 298 124 180 3.37e-14 73.2
Msa0362150 MtrunA17_Chr2g0294231 57.447 94 39 1 399 491 187 280 3.94e-27 113
Msa0362150 MtrunA17_Chr2g0294231 59.375 64 25 1 243 305 203 266 4.04e-16 80.5
Msa0362150 MtrunA17_Chr1g0150801 59.211 76 30 1 396 471 84 158 1.92e-26 105
Msa0362150 MtrunA17_Chr1g0150801 50.000 58 28 1 243 299 102 159 4.83e-12 64.3
Msa0362150 MtrunA17_Chr5g0443131 59.259 81 32 1 401 480 143 223 6.72e-26 108
Msa0362150 MtrunA17_Chr5g0443131 53.125 64 29 1 243 305 157 220 3.87e-13 70.5
Msa0362150 MtrunA17_Chr2g0288871 31.879 298 147 11 206 474 95 365 1.19e-25 111
Msa0362150 MtrunA17_Chr8g0383251 53.165 79 37 0 402 480 95 173 5.07e-25 102
Msa0362150 MtrunA17_Chr8g0386241 56.410 78 34 0 396 473 84 161 5.80e-25 102
Msa0362150 MtrunA17_Chr8g0386241 35.664 143 80 4 172 307 31 168 4.32e-17 79.7
Msa0362150 MtrunA17_Chr7g0224801 59.459 74 30 0 406 479 84 157 6.03e-25 101
Msa0362150 MtrunA17_Chr7g0224801 51.515 66 31 1 243 307 93 158 3.87e-16 76.6
Msa0362150 MtrunA17_Chr7g0270831 53.012 83 38 1 395 476 196 278 2.80e-24 105
Msa0362150 MtrunA17_Chr4g0075201 55.000 80 35 1 398 476 250 329 2.61e-23 103
Msa0362150 MtrunA17_Chr4g0075201 49.180 61 29 2 243 301 267 327 2.75e-11 66.2
Msa0362150 MtrunA17_Chr3g0099641 52.564 78 36 1 398 474 234 311 2.86e-23 103
Msa0362150 MtrunA17_Chr2g0322391 55.000 80 35 1 398 476 332 411 2.92e-23 104
Msa0362150 MtrunA17_Chr5g0401821 49.495 99 41 2 382 479 174 264 3.10e-23 99.8
Msa0362150 MtrunA17_Chr4g0025061 42.202 109 59 2 388 495 333 438 8.90e-23 102
Msa0362150 MtrunA17_Chr4g0068541 48.113 106 51 2 399 502 192 295 1.04e-22 100
Msa0362150 MtrunA17_Chr4g0068541 56.338 71 30 1 243 312 208 278 2.25e-15 78.6
Msa0362150 MtrunA17_Chr4g0060271 46.296 108 53 2 372 474 208 315 1.29e-22 102
Msa0362150 MtrunA17_Chr4g0060271 49.180 61 29 2 243 301 255 315 6.79e-11 65.1
Msa0362150 MtrunA17_Chr3g0129321 54.054 74 34 0 401 474 104 177 1.47e-22 95.9
Msa0362150 MtrunA17_Chr3g0129321 50.000 60 29 1 243 301 118 177 8.20e-12 64.7
Msa0362150 MtrunA17_Chr4g0051181 55.000 80 35 1 397 475 225 304 1.61e-22 101
Msa0362150 MtrunA17_Chr4g0051181 50.820 61 28 2 243 301 243 303 1.30e-11 67.0
Msa0362150 MtrunA17_Chr7g0248721 57.692 78 32 1 394 471 120 196 4.07e-22 95.1
Msa0362150 MtrunA17_Chr7g0248721 53.125 64 28 2 237 299 135 197 1.18e-14 73.6
Msa0362150 MtrunA17_Chr6g0485431 42.400 125 66 3 354 474 92 214 4.70e-22 98.2
Msa0362150 MtrunA17_Chr5g0432071 50.588 85 42 0 222 306 83 167 7.35e-22 94.4
Msa0362150 MtrunA17_Chr5g0432071 53.226 62 28 1 415 476 104 164 2.94e-15 75.1
Msa0362150 MtrunA17_Chr7g0216891 38.462 130 61 3 350 471 158 276 3.34e-21 97.8
Msa0362150 MtrunA17_Chr7g0216891 50.847 59 27 2 243 299 219 277 7.79e-11 65.1
Msa0362150 MtrunA17_Chr1g0189391 56.338 71 30 1 402 471 84 154 3.47e-21 95.1
Msa0362150 MtrunA17_Chr4g0053281 49.474 95 39 2 383 476 242 328 3.92e-21 95.1
Msa0362150 MtrunA17_Chr1g0147881 49.474 95 39 3 383 476 238 324 1.01e-20 94.0
Msa0362150 MtrunA17_Chr2g0302391 50.633 79 38 1 399 476 195 273 2.02e-20 94.4
Msa0362150 MtrunA17_Chr3g0136961 61.017 59 22 1 414 471 137 195 2.62e-20 91.7
Msa0362150 MtrunA17_Chr3g0136961 39.773 88 45 3 226 311 127 208 1.79e-12 68.6
Msa0362150 MtrunA17_Chr4g0025051 44.211 95 49 2 402 495 322 413 3.09e-20 94.7
Msa0362150 MtrunA17_Chr7g0238921 63.158 57 21 0 415 471 124 180 3.38e-20 92.0
Msa0362150 MtrunA17_Chr7g0238921 56.140 57 24 1 243 298 124 180 8.30e-13 69.7
Msa0362150 MtrunA17_Chr2g0333851 57.812 64 26 1 413 475 167 230 2.02e-19 89.7
Msa0362150 MtrunA17_Chr2g0333851 48.333 60 29 2 244 301 170 229 3.35e-11 64.7
Msa0362150 MtrunA17_Chr4g0071521 49.451 91 37 3 382 471 220 302 3.39e-19 89.0
Msa0362150 MtrunA17_Chr1g0150281 57.895 57 23 1 416 471 141 197 5.65e-19 87.8
Msa0362150 MtrunA17_Chr1g0184691 59.091 66 25 2 412 475 290 355 1.87e-18 87.4
Msa0362150 MtrunA17_Chr4g0001361 57.143 63 26 1 413 474 160 222 2.86e-18 86.3
Msa0362150 MtrunA17_Chr4g0001361 50.000 60 28 2 244 301 163 222 8.41e-12 66.6
Msa0362150 MtrunA17_Chr1g0150271 49.206 63 31 1 413 474 99 161 1.20e-17 83.2
Msa0362150 MtrunA17_Chr7g0228941 52.459 61 28 1 412 471 49 109 8.78e-17 77.0
Msa0362150 MtrunA17_Chr2g0289181 46.753 77 40 1 404 479 3 79 9.19e-17 80.1
Msa0362150 MtrunA17_Chr1g0188961 68.000 50 16 0 435 484 3 52 1.42e-16 74.3
Msa0362150 MtrunA17_Chr8g0379461 50.794 63 30 1 416 477 77 139 1.45e-16 79.7
Msa0362150 MtrunA17_Chr7g0270051 37.815 119 69 3 367 484 9 123 1.66e-16 80.1
Msa0362150 MtrunA17_Chr7g0270051 50.000 60 28 2 244 301 54 113 2.72e-11 64.3
Msa0362150 MtrunA17_Chr2g0284321 41.111 90 51 2 416 504 36 124 2.24e-16 78.6
Msa0362150 MtrunA17_Chr3g0139021 48.000 75 38 1 399 472 298 372 3.73e-16 80.9
Msa0362150 MtrunA17_Chr8g0387501 50.769 65 31 1 414 477 128 192 5.07e-16 78.6
Msa0362150 MtrunA17_Chr8g0387501 44.444 72 36 3 237 306 123 192 2.20e-11 64.7
Msa0362150 MtrunA17_Chr7g0248691 42.157 102 45 3 379 479 131 219 7.82e-16 79.0
Msa0362150 MtrunA17_Chr2g0319961 49.206 63 31 1 416 477 81 143 1.48e-15 77.0
Msa0362150 MtrunA17_Chr8g0348311 40.594 101 46 3 380 479 133 220 1.90e-15 78.2
Msa0362150 MtrunA17_Chr2g0293481 42.045 88 41 2 416 502 268 346 2.34e-15 79.0
Msa0362150 MtrunA17_Chr4g0024391 35.354 99 60 2 398 495 212 307 6.58e-15 77.4
Msa0362150 MtrunA17_Chr6g0468181 64.706 51 18 0 260 310 19 69 7.70e-15 71.2
Msa0362150 MtrunA17_Chr4g0009881 47.143 70 36 1 233 302 7 75 9.57e-15 70.9
Msa0362150 MtrunA17_Chr1g0202461 46.269 67 35 1 412 477 258 324 8.32e-14 73.6
Msa0362150 MtrunA17_Chr1g0202461 42.647 68 37 2 236 301 254 321 7.38e-11 64.3
Msa0362150 MtrunA17_Chr3g0126391 50.847 59 26 1 414 469 132 190 1.19e-12 69.7
Msa0362150 MtrunA17_Chr3g0126391 49.231 65 29 2 236 296 126 190 1.06e-11 66.6
Msa0362150 MtrunA17_Chr5g0419241 54.348 46 21 0 398 443 60 105 1.75e-12 64.3
Msa0362150 MtrunA17_Chr8g0387981 39.062 128 60 7 347 469 75 189 5.53e-12 67.8
Msa0362150 MtrunA17_Chr8g0387981 32.877 146 86 5 156 296 51 189 1.83e-11 66.2
Msa0362150 MtrunA17_Chr2g0315361 32.812 128 77 3 345 469 84 205 1.22e-11 66.2
Msa0362150 MtrunA17_Chr8g0347251 48.438 64 29 2 237 296 130 193 1.73e-11 65.9
Msa0362150 MtrunA17_Chr7g0275531 47.458 59 28 1 414 469 117 175 2.52e-11 65.5
Msa0362150 MtrunA17_Chr7g0275531 45.714 70 32 3 243 306 118 187 4.03e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0362150 AT4G26640.2 57.295 562 188 18 46 595 36 557 0.0 543
Msa0362150 AT4G26640.7 56.912 557 188 18 51 595 1 517 0.0 532
Msa0362150 AT4G26640.1 55.192 520 181 18 88 595 6 485 1.81e-162 473
Msa0362150 AT4G26640.5 61.735 392 121 12 214 595 9 381 1.41e-152 444
Msa0362150 AT4G26640.6 61.735 392 121 12 214 595 9 381 1.41e-152 444
Msa0362150 AT4G26640.4 61.735 392 121 12 214 595 9 381 1.41e-152 444
Msa0362150 AT4G26640.3 61.735 392 121 12 214 595 9 381 1.41e-152 444
Msa0362150 AT5G56270.1 42.675 471 188 13 60 477 108 549 1.14e-89 291
Msa0362150 AT2G03340.1 40.315 444 189 14 47 483 109 483 1.28e-82 268
Msa0362150 AT1G13960.2 53.226 248 102 4 238 474 71 315 3.08e-79 254
Msa0362150 AT2G38470.1 53.558 267 110 5 223 477 160 424 9.12e-79 258
Msa0362150 AT1G13960.1 53.226 248 102 4 238 474 224 468 5.07e-78 256
Msa0362150 AT4G26440.1 43.207 368 137 10 170 488 101 445 1.67e-75 251
Msa0362150 AT3G01080.1 55.932 236 71 4 239 474 163 365 1.77e-74 244
Msa0362150 AT3G01080.2 55.932 236 71 4 239 474 201 403 2.15e-74 245
Msa0362150 AT5G07100.2 50.617 243 63 4 236 477 17 203 7.33e-72 230
Msa0362150 AT5G07100.2 28.947 190 104 3 143 305 19 204 1.89e-14 73.2
Msa0362150 AT5G07100.2 39.785 93 45 1 403 484 1 93 3.65e-14 72.4
Msa0362150 AT5G07100.4 50.617 243 63 4 236 477 17 203 7.33e-72 230
Msa0362150 AT5G07100.4 28.947 190 104 3 143 305 19 204 1.89e-14 73.2
Msa0362150 AT5G07100.4 39.785 93 45 1 403 484 1 93 3.65e-14 72.4
Msa0362150 AT5G07100.5 50.617 243 63 4 236 477 17 203 7.33e-72 230
Msa0362150 AT5G07100.5 28.947 190 104 3 143 305 19 204 1.89e-14 73.2
Msa0362150 AT5G07100.5 39.785 93 45 1 403 484 1 93 3.65e-14 72.4
Msa0362150 AT5G07100.3 50.617 243 63 4 236 477 17 203 7.33e-72 230
Msa0362150 AT5G07100.3 28.947 190 104 3 143 305 19 204 1.89e-14 73.2
Msa0362150 AT5G07100.3 39.785 93 45 1 403 484 1 93 3.65e-14 72.4
Msa0362150 AT5G07100.1 50.617 243 63 4 236 477 110 296 4.33e-71 231
Msa0362150 AT5G07100.1 29.304 273 158 6 64 305 29 297 6.84e-24 102
Msa0362150 AT5G07100.1 40.367 109 49 3 390 485 84 189 1.08e-15 78.6
Msa0362150 AT2G04880.2 40.557 323 165 7 175 482 40 350 7.16e-67 225
Msa0362150 AT2G30250.1 48.387 248 104 4 240 480 163 393 2.00e-65 219
Msa0362150 AT2G30250.1 39.216 102 51 2 415 506 166 266 1.00e-11 67.4
Msa0362150 AT2G04880.1 40.179 336 172 7 175 482 40 374 2.61e-65 222
Msa0362150 AT2G37260.3 46.094 256 110 5 238 473 80 327 5.22e-57 196
Msa0362150 AT2G37260.3 55.738 61 26 1 416 476 86 145 1.02e-14 76.3
Msa0362150 AT2G37260.2 46.094 256 110 5 238 473 78 325 5.90e-57 195
Msa0362150 AT2G37260.2 55.738 61 26 1 416 476 84 143 1.10e-14 76.3
Msa0362150 AT2G37260.1 46.275 255 109 5 239 473 161 407 3.05e-56 196
Msa0362150 AT2G37260.1 55.738 61 26 1 416 476 166 225 1.36e-14 76.6
Msa0362150 AT4G30935.1 40.146 274 132 9 244 505 169 422 6.05e-45 166
Msa0362150 AT4G12020.6 43.602 211 94 6 238 435 463 661 1.20e-38 153
Msa0362150 AT4G12020.6 50.820 61 29 1 414 474 467 526 1.84e-12 71.2
Msa0362150 AT4G12020.8 43.602 211 94 6 238 435 463 661 1.20e-38 153
Msa0362150 AT4G12020.8 50.820 61 29 1 414 474 467 526 1.84e-12 71.2
Msa0362150 AT4G12020.1 43.602 211 94 6 238 435 463 661 1.23e-38 153
Msa0362150 AT4G12020.1 31.061 132 73 3 414 529 467 596 1.83e-12 71.2
Msa0362150 AT4G12020.9 43.602 211 94 6 238 435 463 661 1.23e-38 153
Msa0362150 AT4G12020.9 31.061 132 73 3 414 529 467 596 1.83e-12 71.2
Msa0362150 AT4G12020.7 43.602 211 94 6 238 435 463 661 1.36e-38 153
Msa0362150 AT4G12020.7 50.820 61 29 1 414 474 467 526 1.91e-12 71.2
Msa0362150 AT4G12020.3 43.602 211 94 6 238 435 463 661 1.50e-38 153
Msa0362150 AT4G12020.3 50.820 61 29 1 414 474 467 526 1.91e-12 71.2
Msa0362150 AT4G12020.10 43.602 211 94 6 238 435 463 661 1.54e-38 153
Msa0362150 AT4G12020.10 50.820 61 29 1 414 474 467 526 1.96e-12 71.2
Msa0362150 AT4G12020.2 43.602 211 94 6 238 435 463 661 1.68e-38 152
Msa0362150 AT4G12020.2 50.820 61 29 1 414 474 467 526 2.03e-12 71.2
Msa0362150 AT4G12020.11 43.602 211 94 6 238 435 463 661 1.72e-38 152
Msa0362150 AT4G12020.11 31.061 132 73 3 414 529 467 596 2.14e-12 70.9
Msa0362150 AT4G12020.4 43.602 211 94 6 238 435 463 661 1.75e-38 152
Msa0362150 AT4G12020.4 50.820 61 29 1 414 474 467 526 2.10e-12 71.2
Msa0362150 AT4G12020.5 43.602 211 94 6 238 435 396 594 2.20e-38 152
Msa0362150 AT4G12020.5 50.820 61 29 1 414 474 400 459 2.29e-12 70.9
Msa0362150 AT3G01080.3 60.000 95 35 1 239 333 201 292 2.63e-30 122
Msa0362150 AT3G01080.3 55.556 63 27 1 415 477 205 266 4.43e-16 80.1
Msa0362150 AT4G18170.1 55.556 108 46 1 368 475 127 232 2.75e-30 121
Msa0362150 AT4G18170.1 55.000 60 26 1 243 301 172 231 3.80e-14 74.3
Msa0362150 AT2G44745.1 61.538 78 30 0 394 471 124 201 3.06e-29 115
Msa0362150 AT2G44745.1 59.649 57 22 1 243 298 145 201 1.59e-15 76.3
Msa0362150 AT4G39410.1 64.474 76 27 0 396 471 204 279 3.93e-29 118
Msa0362150 AT4G39410.1 54.386 57 25 1 243 298 223 279 1.44e-12 69.3
Msa0362150 AT1G29860.1 62.821 78 29 0 399 476 120 197 7.70e-28 113
Msa0362150 AT1G29860.1 54.688 64 28 1 243 305 136 199 1.86e-14 74.7
Msa0362150 AT1G69310.4 64.474 76 27 0 396 471 128 203 2.77e-27 112
Msa0362150 AT1G69310.4 57.895 57 23 1 243 298 147 203 1.13e-13 72.4
Msa0362150 AT1G69310.2 64.474 76 27 0 396 471 128 203 2.77e-27 112
Msa0362150 AT1G69310.2 57.895 57 23 1 243 298 147 203 1.13e-13 72.4
Msa0362150 AT1G69310.1 64.474 76 27 0 396 471 128 203 2.77e-27 112
Msa0362150 AT1G69310.1 57.895 57 23 1 243 298 147 203 1.13e-13 72.4
Msa0362150 AT5G26170.1 62.857 70 26 0 402 471 100 169 4.63e-27 108
Msa0362150 AT5G26170.1 49.123 57 28 1 243 298 113 169 1.30e-11 63.9
Msa0362150 AT5G46350.1 62.338 77 29 0 401 477 169 245 6.19e-27 112
Msa0362150 AT5G46350.1 51.429 70 31 2 243 309 183 252 4.64e-14 73.9
Msa0362150 AT2G47260.1 63.158 76 28 0 399 474 158 233 1.79e-26 111
Msa0362150 AT2G47260.1 43.478 92 51 1 223 313 154 245 8.36e-15 76.6
Msa0362150 AT5G13080.1 57.692 78 33 0 402 479 54 131 3.40e-26 104
Msa0362150 AT5G13080.1 50.000 66 32 1 243 307 67 132 1.41e-15 74.7
Msa0362150 AT3G01970.1 58.537 82 34 0 402 483 52 133 3.96e-26 104
Msa0362150 AT3G01970.1 53.030 66 30 1 243 307 65 130 1.82e-14 71.6
Msa0362150 AT5G49520.1 61.842 76 29 0 399 474 205 280 5.43e-26 110
Msa0362150 AT5G49520.1 48.101 79 40 1 228 305 206 284 1.31e-14 76.6
Msa0362150 AT1G55600.1 62.667 75 28 0 402 476 294 368 1.50e-25 110
Msa0362150 AT1G55600.1 55.000 60 26 1 243 301 307 366 2.93e-14 75.9
Msa0362150 AT5G41570.1 60.563 71 28 0 401 471 84 154 8.14e-25 102
Msa0362150 AT5G41570.1 51.613 62 29 1 239 299 94 155 8.30e-14 70.5
Msa0362150 AT4G04450.2 52.632 95 41 2 398 491 181 272 1.05e-24 107
Msa0362150 AT4G04450.2 39.130 92 51 3 215 301 167 258 2.33e-11 66.6
Msa0362150 AT1G64000.1 60.000 70 28 0 402 471 101 170 2.07e-24 101
Msa0362150 AT1G64000.1 51.613 62 29 1 239 299 110 171 3.60e-14 72.0
Msa0362150 AT5G64810.1 56.338 71 31 0 402 472 97 167 3.90e-24 100
Msa0362150 AT5G64810.1 40.650 123 51 5 191 298 51 166 1.77e-11 63.9
Msa0362150 AT4G04450.1 52.632 95 41 2 398 491 275 366 4.78e-24 106
Msa0362150 AT4G04450.1 38.947 95 53 3 212 301 258 352 3.53e-11 66.2
Msa0362150 AT2G46130.1 56.579 76 33 0 396 471 11 86 8.47e-24 96.7
Msa0362150 AT2G46130.1 56.897 58 24 1 243 299 30 87 1.48e-15 73.2
Msa0362150 AT4G22070.4 51.724 87 41 1 389 474 271 357 3.50e-23 103
Msa0362150 AT4G22070.3 51.724 87 41 1 389 474 271 357 3.50e-23 103
Msa0362150 AT4G22070.2 51.724 87 41 1 389 474 271 357 3.50e-23 103
Msa0362150 AT4G22070.1 51.724 87 41 1 389 474 271 357 3.50e-23 103
Msa0362150 AT1G62300.1 56.410 78 33 1 398 474 295 372 3.54e-23 103
Msa0362150 AT1G62300.1 40.476 84 45 3 223 301 289 372 8.14e-11 65.5
Msa0362150 AT1G69310.3 60.526 76 26 1 396 471 128 199 1.32e-22 98.6
Msa0362150 AT1G68150.1 55.128 78 34 1 399 475 219 296 3.81e-22 99.0
Msa0362150 AT1G68150.1 50.820 61 28 2 243 301 235 295 4.72e-11 65.5
Msa0362150 AT3G62340.1 57.895 76 32 0 399 474 102 177 3.97e-22 97.1
Msa0362150 AT3G62340.1 56.667 60 25 1 243 301 118 177 1.03e-13 72.4
Msa0362150 AT4G01720.1 54.430 79 35 1 397 474 221 299 6.14e-22 99.8
Msa0362150 AT5G15130.2 51.282 78 37 1 398 474 168 245 1.08e-21 99.4
Msa0362150 AT5G15130.1 51.282 78 37 1 398 474 210 287 1.40e-21 99.0
Msa0362150 AT4G31800.2 38.281 128 62 4 414 537 110 224 2.21e-21 94.4
Msa0362150 AT1G18860.1 52.564 78 36 1 398 474 222 299 2.53e-21 98.2
Msa0362150 AT1G18860.1 50.820 61 28 2 243 301 239 299 9.88e-11 65.1
Msa0362150 AT4G31800.1 38.281 128 62 4 414 537 175 289 4.26e-21 94.7
Msa0362150 AT2G21900.1 37.302 126 67 3 354 476 54 170 4.43e-21 92.0
Msa0362150 AT2G21900.1 47.059 68 35 1 235 301 101 168 1.19e-13 70.5
Msa0362150 AT2G23320.1 48.387 93 39 2 382 473 215 299 7.25e-20 91.3
Msa0362150 AT4G31550.1 52.439 82 38 1 399 479 230 311 7.97e-20 91.3
Msa0362150 AT4G31550.2 52.439 82 38 1 399 479 229 310 8.16e-20 91.3
Msa0362150 AT4G23550.1 44.828 87 44 2 404 489 129 212 2.44e-19 89.7
Msa0362150 AT4G24240.1 49.462 93 38 3 382 473 256 340 2.79e-19 90.1
Msa0362150 AT2G46130.2 52.632 76 32 1 396 471 11 82 2.99e-19 83.6
Msa0362150 AT2G46130.2 51.724 58 23 2 243 299 30 83 4.96e-11 60.5
Msa0362150 AT1G80840.1 42.056 107 43 3 394 481 115 221 4.17e-19 89.0
Msa0362150 AT1G80840.1 48.333 60 29 2 244 301 147 206 3.33e-11 65.1
Msa0362150 AT5G43290.1 44.444 99 37 2 391 471 72 170 4.72e-19 88.2
Msa0362150 AT5G43290.1 49.333 75 37 1 225 298 96 170 1.92e-13 71.6
Msa0362150 AT5G28650.1 43.564 101 48 3 382 481 237 329 1.21e-18 87.8
Msa0362150 AT2G25000.2 40.187 107 41 4 414 518 102 187 1.32e-18 85.5
Msa0362150 AT2G25000.4 40.187 107 41 4 414 518 102 187 1.32e-18 85.5
Msa0362150 AT2G30590.1 51.899 79 34 2 394 471 295 370 1.88e-18 88.2
Msa0362150 AT2G24570.1 55.405 74 32 1 399 471 227 300 2.48e-18 86.7
Msa0362150 AT3G04670.1 43.564 101 48 3 382 481 237 329 2.84e-18 86.7
Msa0362150 AT2G25000.3 40.187 107 41 4 414 518 124 209 2.95e-18 85.1
Msa0362150 AT1G69810.2 45.263 95 48 3 398 490 128 220 3.53e-18 86.7
Msa0362150 AT1G69810.2 36.170 94 53 3 220 310 126 215 7.09e-11 64.3
Msa0362150 AT2G25000.1 40.187 107 41 4 414 518 145 230 3.60e-18 85.5
Msa0362150 AT1G69810.1 45.263 95 48 3 398 490 186 278 4.65e-18 87.0
Msa0362150 AT1G69810.1 36.170 94 53 3 220 310 184 273 8.42e-11 64.7
Msa0362150 AT4G01250.1 53.846 65 29 1 416 479 129 193 1.62e-16 80.9
Msa0362150 AT4G01250.1 32.203 118 72 3 212 327 103 214 2.95e-11 65.1
Msa0362150 AT1G29280.1 51.667 60 28 1 416 474 75 134 5.22e-16 79.0
Msa0362150 AT3G58710.1 48.485 66 33 1 416 480 72 137 1.91e-15 77.4
Msa0362150 AT3G58710.2 48.485 66 33 1 416 480 71 136 1.92e-15 77.4
Msa0362150 AT5G52830.1 45.833 72 38 1 408 478 158 229 2.58e-15 78.2
Msa0362150 AT2G34830.2 50.000 64 31 1 416 478 225 288 3.04e-15 79.0
Msa0362150 AT2G34830.1 50.000 64 31 1 416 478 216 279 3.05e-15 78.6
Msa0362150 AT1G30650.1 48.438 64 32 1 416 478 218 281 1.74e-14 76.3
Msa0362150 AT5G45050.4 50.000 64 31 1 416 478 1042 1105 6.81e-14 75.9
Msa0362150 AT5G45050.1 50.000 64 31 1 416 478 1181 1244 6.91e-14 75.9
Msa0362150 AT5G45050.2 50.000 64 31 1 416 478 1153 1216 7.37e-14 75.5
Msa0362150 AT5G24110.1 46.154 65 31 2 236 296 106 170 2.59e-12 68.6
Msa0362150 AT4G23810.1 51.724 58 24 2 243 296 158 215 4.06e-12 68.2
Msa0362150 AT4G11070.2 42.391 92 47 3 243 328 109 200 5.05e-12 67.4
Msa0362150 AT2G40740.1 32.773 119 70 3 188 296 112 230 5.34e-12 67.4
Msa0362150 AT2G40740.1 45.588 68 31 2 415 476 173 240 1.73e-11 65.9
Msa0362150 AT4G11070.1 42.391 92 47 3 243 328 141 232 6.98e-12 67.4
Msa0362150 AT2G40740.3 32.773 119 70 3 188 296 121 239 7.09e-12 67.0
Msa0362150 AT2G40740.3 45.588 68 31 2 415 476 182 249 2.15e-11 65.9
Msa0362150 AT2G46400.1 36.082 97 52 2 376 469 72 161 1.35e-11 66.2
Msa0362150 AT1G66560.1 48.276 58 27 1 415 469 103 160 3.96e-11 64.3

Find 185 sgRNAs with CRISPR-Local

Find 497 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GACAATGGCTTTAATAATTA+TGG 0.145299 3_1:+53023612 Msa0362150:intron
CGACGGCTTGGTTGAGGTTT+AGG 0.198085 3_1:-53023420 None:intergenic
CGGGAGATTGTCGCCGGAAT+TGG 0.216231 3_1:-53020526 None:intergenic
TATAAACTATCTCAGTAATT+TGG 0.216997 3_1:-53023380 None:intergenic
GGTTATCGCTGGCGTAAATA+TGG 0.217888 3_1:+53023952 Msa0362150:CDS
AATTACTGAGATAGTTTATA+AGG 0.218011 3_1:+53023383 Msa0362150:CDS
CATCAACCTCATCATTATTC+TGG 0.219062 3_1:-53023731 None:intergenic
GGATACAATTGGCGAAAATA+TGG 0.222709 3_1:+53023258 Msa0362150:CDS
CTAAGGGTATGTTCTTCTTA+TGG 0.228476 3_1:-53020310 None:intergenic
CCCAGTTGCTTTGCTGCCAC+TGG 0.247763 3_1:-53023166 None:intergenic
TAGTATCACTTTCTTCTTGC+CGG 0.307326 3_1:-53026307 None:intergenic
GAAGATGACCCGGTTCGATT+TGG 0.317262 3_1:-53020578 None:intergenic
TGCTCATGTTGAAGTCGTTT+TGG 0.318348 3_1:+53023131 Msa0362150:CDS
TATGGGCAGAAGCTTGTTAA+AGG 0.320582 3_1:+53023276 Msa0362150:CDS
ACCGCACAGTAGATCAAATA+TGG 0.353137 3_1:+53022654 Msa0362150:CDS
CCTGTTCAAATGGTTAGTTC+AGG 0.356843 3_1:+53023102 Msa0362150:CDS
TATGTTGTTATTACAGCTTT+CGG 0.357739 3_1:-53026194 None:intergenic
TAATGTTTGATTTCTATGTT+AGG 0.358295 3_1:-53020382 None:intergenic
ACTATGAACAAACTTGAAAC+TGG 0.362350 3_1:-53026441 None:intergenic
AGAATGATGCGCAATGAATA+TGG 0.363177 3_1:+53026392 Msa0362150:CDS
CCCAGTGGCAGCAAAGCAAC+TGG 0.365024 3_1:+53023165 Msa0362150:CDS
CACCGGTAGTTAAGCCTATC+CGG 0.369584 3_1:+53023878 Msa0362150:CDS
TCTGAGTGAGGTTGACATAT+TGG 0.381000 3_1:+53023924 Msa0362150:CDS
ATCATTCTCCCTAGACTGTT+TGG 0.382492 3_1:-53026377 None:intergenic
TTCATATTTGAGAGAAGAAC+AGG 0.386983 3_1:-53020740 None:intergenic
TTGAAGCACGCAGAGGTTAC+AGG 0.387107 3_1:-53022586 None:intergenic
CAACCAAGCCGTCGATTCTC+TGG 0.399506 3_1:+53023429 Msa0362150:CDS
CTACAACAGGCTCCCTTCCT+AGG 0.401914 3_1:+53022512 Msa0362150:CDS
ACTTTCAGTTGCTGCTGATA+AGG 0.402821 3_1:+53023224 Msa0362150:CDS
GGGAGATTGTCGCCGGAATT+GGG 0.408940 3_1:-53020525 None:intergenic
CAAGTTGATGGTAGGGGTAG+TGG 0.415864 3_1:+53023201 Msa0362150:CDS
TCAAACCTTCTCTTTGAGAA+AGG 0.417135 3_1:-53023762 None:intergenic
CTACCATCATTTGCTGCTAT+AGG 0.423842 3_1:-53023681 None:intergenic
CCAGTTGCTTTGCTGCCACT+GGG 0.424553 3_1:-53023165 None:intergenic
CAGCTCTCAGACAGTGTGAT+AGG 0.428369 3_1:-53026735 None:intergenic
CTAGGAAGGGAGCCTGTTGT+AGG 0.430759 3_1:-53022511 None:intergenic
ATTACTGAGATAGTTTATAA+GGG 0.434391 3_1:+53023384 Msa0362150:CDS
GTATCTAGCTCCGGAGGTGG+TGG 0.443969 3_1:-53020627 None:intergenic
ATCATCATCACCTGTTCAAA+TGG 0.445905 3_1:+53023092 Msa0362150:CDS
TGCAAGAAGAGAGGTCTGAT+AGG 0.448971 3_1:+53023469 Msa0362150:CDS
GTGTTTGTCTATGTTATTGA+AGG 0.452329 3_1:-53020434 None:intergenic
CCGCCGGCGATACCCAATTC+CGG 0.453556 3_1:+53020513 Msa0362150:CDS
TCTGAGAGCTGCCCTTTGAT+AGG 0.455505 3_1:+53026747 Msa0362150:three_prime_UTR
GTCTGTCCACCTGCAGCTGA+TGG 0.462023 3_1:-53026278 None:intergenic
GTGAGGGCATACCTAGGGTT+AGG 0.465177 3_1:-53023997 None:intergenic
CGGTTTGAACTCAAAGAAGC+TGG 0.465493 3_1:-53022635 None:intergenic
CGCCGGCGGGAGATTGTCGC+CGG 0.471256 3_1:-53020532 None:intergenic
TCTGAAGATCCAAATCGAAC+CGG 0.473532 3_1:+53020569 Msa0362150:CDS
GAGAATCGACGGCTTGGTTG+AGG 0.474850 3_1:-53023426 None:intergenic
ATTAGCCTTGACCTTGGAAT+GGG 0.475553 3_1:+53026329 Msa0362150:CDS
CTGTTCAAATGGTTAGTTCA+GGG 0.475735 3_1:+53023103 Msa0362150:CDS
CCCGGCGGAATCGTCAAAAC+CGG 0.475991 3_1:-53020689 None:intergenic
ATGCACAAATGCCGGTTGCC+CGG 0.477441 3_1:+53026139 Msa0362150:CDS
TTCATCTTCTATTACCGTCT+CGG 0.477704 3_1:-53023506 None:intergenic
CGGCGAAGCTTCCGATCTCT+AGG 0.481938 3_1:+53020663 Msa0362150:CDS
ATTATTCTTCCCATGTTCTG+TGG 0.482564 3_1:-53026575 None:intergenic
ACAATCTCCCGCCGGCGAAA+CGG 0.484252 3_1:+53020538 Msa0362150:CDS
CTAGAGATCGGAAGCTTCGC+CGG 0.486835 3_1:-53020662 None:intergenic
CTTCCCATGTTCTGTGGGCA+AGG 0.486920 3_1:-53026569 None:intergenic
GAACATGGGAAGAATAATGA+TGG 0.489327 3_1:+53026580 Msa0362150:CDS
TGGTGTTCCGTTTCGCCGGC+GGG 0.490876 3_1:-53020545 None:intergenic
GTAGAACCTTCACCTACAAC+AGG 0.492602 3_1:+53022499 Msa0362150:CDS
GAACAATCGACTCAAATAAA+CGG 0.492807 3_1:+53022991 Msa0362150:CDS
TACTGCTAGTTCCTATCAAA+GGG 0.493734 3_1:-53026758 None:intergenic
CCACCAGAGAATCGACGGCT+TGG 0.494093 3_1:-53023432 None:intergenic
GGGTCCGTCAGAAACAGAAT+CGG 0.494828 3_1:-53020606 None:intergenic
ATATCCTTGCCCACAGAACA+TGG 0.495088 3_1:+53026565 Msa0362150:CDS
TATTACAAATGCACAAATGC+CGG 0.497192 3_1:+53026131 Msa0362150:CDS
GATACAATTGGCGAAAATAT+GGG 0.498237 3_1:+53023259 Msa0362150:CDS
AATAACAGCGCAAATCCATA+TGG 0.500702 3_1:+53026497 Msa0362150:CDS
TATCTAGCTCCGGAGGTGGT+GGG 0.501616 3_1:-53020626 None:intergenic
GTTATCGCTGGCGTAAATAT+GGG 0.501724 3_1:+53023953 Msa0362150:CDS
TATTAGCCTTGACCTTGGAA+TGG 0.503654 3_1:+53026328 Msa0362150:CDS
TGTACTGTTTGTTGAAGCCT+AGG 0.504067 3_1:-53022529 None:intergenic
CCTGAACTAACCATTTGAAC+AGG 0.504831 3_1:-53023102 None:intergenic
AGCATCACAAGTTGATGGTA+GGG 0.505935 3_1:+53023194 Msa0362150:CDS
CTCTTTGAACGCTCTCATGA+TGG 0.508080 3_1:+53023357 Msa0362150:CDS
GAAAATAGACCAAACAGTCT+AGG 0.508304 3_1:+53026368 Msa0362150:CDS
AGAATGGTGTTCCGTTTCGC+CGG 0.508663 3_1:-53020549 None:intergenic
GATGGTAGTCCAGAGGGTGC+AGG 0.508969 3_1:+53023696 Msa0362150:CDS
AAAATAGACCAAACAGTCTA+GGG 0.512044 3_1:+53026369 Msa0362150:CDS
ACACCACCTCCGGTATACTT+TGG 0.512830 3_1:+53026467 Msa0362150:CDS
TATGGGCAGAAGGTTGTAAG+AGG 0.513147 3_1:+53023970 Msa0362150:CDS
GTACAACAACCCGTGGCTCC+CGG 0.516437 3_1:-53023897 None:intergenic
CTGTTTGTTGAAGCCTAGGA+AGG 0.518291 3_1:-53022525 None:intergenic
TCTGACGGACCCACCACCTC+CGG 0.518445 3_1:+53020617 Msa0362150:CDS
TTCGATTTGGATCTTCAGAA+TGG 0.519220 3_1:-53020565 None:intergenic
AGGCTTCAACAAACAGTACA+TGG 0.523911 3_1:+53022532 Msa0362150:CDS
TAGATACAAGCTGATGTCTC+CGG 0.524086 3_1:+53020643 Msa0362150:CDS
GCTGATAAGGCATCTGATGA+TGG 0.524119 3_1:+53023237 Msa0362150:CDS
ATGATCCTTTCTCAAAGAGA+AGG 0.525713 3_1:+53023757 Msa0362150:CDS
CATCAGCTTGTATCTAGCTC+CGG 0.526483 3_1:-53020636 None:intergenic
AAGCATCACAAGTTGATGGT+AGG 0.527382 3_1:+53023193 Msa0362150:CDS
GATACTATTAGCCTTGACCT+TGG 0.529882 3_1:+53026323 Msa0362150:CDS
ACCACTGGTCAAAAGTGAAA+CGG 0.530680 3_1:+53023044 Msa0362150:CDS
CTACTGCTAGTTCCTATCAA+AGG 0.531476 3_1:-53026759 None:intergenic
ATGGCAGGACCATCAGCTGC+AGG 0.534555 3_1:+53026269 Msa0362150:CDS
ACAACCCGTGGCTCCCGGAT+AGG 0.535166 3_1:-53023892 None:intergenic
TGTTCTTCTCTCAAATATGA+AGG 0.535378 3_1:+53020742 Msa0362150:CDS
TCATAGTTCTACACCACCTC+CGG 0.545527 3_1:+53026457 Msa0362150:CDS
TTATTCTTCCCATGTTCTGT+GGG 0.545605 3_1:-53026574 None:intergenic
TTTAGTACACCAAAGTATAC+CGG 0.546728 3_1:-53026476 None:intergenic
CAGGTGGACAGACAAGAATC+CGG 0.548213 3_1:+53026288 Msa0362150:CDS
CTTCAAGCATCACAAGTTGA+TGG 0.548226 3_1:+53023189 Msa0362150:CDS
GATAGACTTATTTCATCTGA+AGG 0.548631 3_1:-53023072 None:intergenic
GAGGTTGACATATTGGATGA+TGG 0.552433 3_1:+53023931 Msa0362150:CDS
AAAACCGGCGACCTAGAGAT+CGG 0.552741 3_1:-53020674 None:intergenic
TAAGCCTATCCGGGAGCCAC+GGG 0.554994 3_1:+53023888 Msa0362150:CDS
CATCTGATGATGGATACAAT+TGG 0.555850 3_1:+53023247 Msa0362150:CDS
ATGGTGTTCCGTTTCGCCGG+CGG 0.559729 3_1:-53020546 None:intergenic
CTGAAGATCCAAATCGAACC+GGG 0.565065 3_1:+53020570 Msa0362150:CDS
ATCGCCGGCGGCGTCCATTG+TGG 0.566852 3_1:-53020501 None:intergenic
TTCACCACAATGGACGCCGC+CGG 0.567268 3_1:+53020497 Msa0362150:exon
GCATGGTTGTAAAAGTCAGC+AGG 0.568193 3_1:-53022964 None:intergenic
TTAAGCCTATCCGGGAGCCA+CGG 0.570866 3_1:+53023887 Msa0362150:CDS
AGCAAATGATGGTAGTCCAG+AGG 0.572325 3_1:+53023689 Msa0362150:CDS
GGTCCGTCAGAAACAGAATC+GGG 0.572769 3_1:-53020605 None:intergenic
GCTTCCGATCTCTAGGTCGC+CGG 0.573754 3_1:+53020670 Msa0362150:CDS
TCGCCGGAATTGGGTATCGC+CGG 0.574304 3_1:-53020516 None:intergenic
AAAGAAGTCGGACTAAGTCC+CGG 0.576381 3_1:-53020707 None:intergenic
GTCAAACCAGAATAATGATG+AGG 0.577464 3_1:+53023725 Msa0362150:CDS
GAGTCGATTGTTCACATGCA+TGG 0.579489 3_1:-53022981 None:intergenic
CCAAGCCGTCGATTCTCTGG+TGG 0.580413 3_1:+53023432 Msa0362150:CDS
CATAATAGTCATGACATGGC+AGG 0.580650 3_1:+53026254 Msa0362150:CDS
CTTGTATCTAGCTCCGGAGG+TGG 0.581542 3_1:-53020630 None:intergenic
AGGGAGCCTGTTGTAGGTGA+AGG 0.581773 3_1:-53022505 None:intergenic
TGACTATTATGCCTCGCAGT+TGG 0.583419 3_1:-53026242 None:intergenic
ATGGTAGTCCAGAGGGTGCA+GGG 0.584503 3_1:+53023697 Msa0362150:CDS
CGACCCGATTCTGTTTCTGA+CGG 0.584808 3_1:+53020602 Msa0362150:CDS
TGTTTGTCTATGTTATTGAA+GGG 0.585720 3_1:-53020433 None:intergenic
GGTTAGAAAACACGTGGAGA+GGG 0.587001 3_1:+53026160 Msa0362150:CDS
CGGTTAGAAAACACGTGGAG+AGG 0.587500 3_1:+53026159 Msa0362150:CDS
ACCGGTAGTTAAGCCTATCC+GGG 0.590884 3_1:+53023879 Msa0362150:CDS
CTCTCTCATCTTCACCACAA+TGG 0.590977 3_1:+53020487 Msa0362150:exon
GGCGACAGTCAAACACATAA+CGG 0.591427 3_1:+53026413 Msa0362150:CDS
GCAAGAAGAGAGGTCTGATA+GGG 0.591769 3_1:+53023470 Msa0362150:CDS
ATAGACTTATTTCATCTGAA+GGG 0.592974 3_1:-53023071 None:intergenic
CCGGAATTGGGTATCGCCGG+CGG 0.593081 3_1:-53020513 None:intergenic
TAAGAGGCAATCCTAACCCT+AGG 0.594010 3_1:+53023986 Msa0362150:CDS
GCTGCTATAGGCGATAGCTC+AGG 0.594070 3_1:-53023669 None:intergenic
GCATCACAAGTTGATGGTAG+GGG 0.594232 3_1:+53023195 Msa0362150:CDS
TATTGGATGATGGTTATCGC+TGG 0.594327 3_1:+53023941 Msa0362150:CDS
TCGCCTATAGCAGCAAATGA+TGG 0.594806 3_1:+53023678 Msa0362150:CDS
TGAGACCCATTCCAAGGTCA+AGG 0.597686 3_1:-53026334 None:intergenic
CTGGCGTAAATATGGGCAGA+AGG 0.604259 3_1:+53023960 Msa0362150:CDS
GCAAATGATGGTAGTCCAGA+GGG 0.605093 3_1:+53023690 Msa0362150:CDS
ACACCAAAGTATACCGGAGG+TGG 0.606893 3_1:-53026470 None:intergenic
GCAGGACCATCAGCTGCAGG+TGG 0.606894 3_1:+53026272 Msa0362150:CDS
AATTCTAATTCTGTTGACGA+CGG 0.609215 3_1:+53022607 Msa0362150:CDS
TATTTCCACCAGAGAATCGA+CGG 0.609518 3_1:-53023437 None:intergenic
TTGGGCTGAGACCCATTCCA+AGG 0.609648 3_1:-53026340 None:intergenic
TCCCGGATAGGCTTAACTAC+CGG 0.612233 3_1:-53023880 None:intergenic
ACAACCAAAAGTTCAGGCAG+AGG 0.618190 3_1:-53026939 None:intergenic
TGTTCAAATGGTTAGTTCAG+GGG 0.618960 3_1:+53023104 Msa0362150:CDS
ATTGTGGTGAAGATGAGAGA+GGG 0.623175 3_1:-53020485 None:intergenic
TTCCGGCGACAATCTCCCGC+CGG 0.624011 3_1:+53020530 Msa0362150:CDS
CCAGTGGCAGCAAAGCAACT+GGG 0.625410 3_1:+53023166 Msa0362150:CDS
ATCGGGTCGTGAAGATGACC+CGG 0.625559 3_1:-53020588 None:intergenic
TCGACTCAAATAAACGGTCA+AGG 0.630340 3_1:+53022997 Msa0362150:CDS
GGTGATTCAAGAAAAGAAGT+CGG 0.631190 3_1:-53020719 None:intergenic
AACATGGGAAGAATAATGAT+GGG 0.637504 3_1:+53026581 Msa0362150:CDS
TGATGTCTGTGCAAGAAGAG+AGG 0.642334 3_1:+53023460 Msa0362150:CDS
CAGCTTGTATCTAGCTCCGG+AGG 0.646467 3_1:-53020633 None:intergenic
TGTTTGTTGAAGCCTAGGAA+GGG 0.651244 3_1:-53022524 None:intergenic
ACCATATTTGATCTACTGTG+CGG 0.651327 3_1:-53022655 None:intergenic
TATCCTTGCCCACAGAACAT+GGG 0.654844 3_1:+53026566 Msa0362150:CDS
TTTAAAGATGAACTATCACT+CGG 0.655794 3_1:-53026533 None:intergenic
CATTGTGGTGAAGATGAGAG+AGG 0.656696 3_1:-53020486 None:intergenic
GCTTCTTTAACTAGCCGAGA+CGG 0.657875 3_1:+53023492 Msa0362150:CDS
AGCTGTAATAACAACATACG+AGG 0.658701 3_1:+53026199 Msa0362150:CDS
GTGGGCAAGGATATGCAGAA+CGG 0.659425 3_1:-53026556 None:intergenic
GAGGCATAATAGTCATGACA+TGG 0.672097 3_1:+53026250 Msa0362150:CDS
AGAGTTTGTACAACAACCCG+TGG 0.672952 3_1:-53023904 None:intergenic
TGTTGTACAAACTCTGAGTG+AGG 0.677001 3_1:+53023912 Msa0362150:CDS
ATTAGAATTGAAGCACGCAG+AGG 0.681984 3_1:-53022593 None:intergenic
TTGTGGTGAAGATGAGAGAG+GGG 0.695872 3_1:-53020484 None:intergenic
TTGCCCGGTTAGAAAACACG+TGG 0.717822 3_1:+53026154 Msa0362150:CDS
ATCATGATGTACCAACTGCG+AGG 0.721330 3_1:+53026231 Msa0362150:CDS
AATGGATCTTGACATCACAC+CGG 0.723113 3_1:+53023861 Msa0362150:CDS
GCTGTAATAACAACATACGA+GGG 0.726227 3_1:+53026200 Msa0362150:CDS
GTGCATTTGTAATAACTGCG+TGG 0.733458 3_1:-53023309 None:intergenic
AGTACACCAAAGTATACCGG+AGG 0.733775 3_1:-53026473 None:intergenic
AGAGGTTACAGGAAACGCAG+CGG 0.759877 3_1:-53022575 None:intergenic
GAAGTCGGACTAAGTCCCGG+CGG 0.769631 3_1:-53020704 None:intergenic
TTGGACGAATCAAATCCCAG+TGG 0.773393 3_1:+53023150 Msa0362150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTAAGTAAAAAAAATTAAA+TGG + chr3_1:53020879-53020898 Msa0362150:intron 10.0%
!! CTAAGTAAAAAAAATTAAAT+GGG + chr3_1:53020880-53020899 Msa0362150:intron 10.0%
!! AATTTGGTTAAAAATTAAAT+GGG + chr3_1:53020942-53020961 Msa0362150:intron 10.0%
!! AATTTGATCAAAAAATTAAA+TGG + chr3_1:53021002-53021021 Msa0362150:intron 10.0%
!! ATTTGATCAAAAAATTAAAT+GGG + chr3_1:53021003-53021022 Msa0362150:intron 10.0%
!!! GAATTAATGTTATTATTTTT+TGG + chr3_1:53021358-53021377 Msa0362150:intron 10.0%
!!! ATTAATGTTATTATTTTTTG+GGG + chr3_1:53021360-53021379 Msa0362150:intron 10.0%
!!! TTTCCTTTTATTTTTTTTAA+CGG + chr3_1:53021767-53021786 Msa0362150:intron 10.0%
!!! TTTTTTTCAACTTAAAAAAA+AGG + chr3_1:53024458-53024477 Msa0362150:intron 10.0%
!! GAATTTGGTTAAAAATTAAA+TGG + chr3_1:53020941-53020960 Msa0362150:intron 15.0%
!! AAAAAGATCAAATACAATAA+CGG - chr3_1:53021543-53021562 None:intergenic 15.0%
!! ATGTTATACAGAAATAAAAA+GGG - chr3_1:53021888-53021907 None:intergenic 15.0%
!! CAACAAAAAAAAATTAACTT+TGG - chr3_1:53023797-53023816 None:intergenic 15.0%
!!! TTTTTTATTAAGCAGAAAAA+TGG + chr3_1:53023843-53023862 Msa0362150:intron 15.0%
!! AAGAATTACAATTCATTAAA+AGG + chr3_1:53024275-53024294 Msa0362150:intron 15.0%
!!! AATTAAATACATATTGGTTA+AGG + chr3_1:53024928-53024947 Msa0362150:intron 15.0%
!!! ATTAAATACATATTGGTTAA+GGG + chr3_1:53024929-53024948 Msa0362150:intron 15.0%
!!! TCATTTTAAACGTTTTCTAA+GGG - chr3_1:53020329-53020348 None:intergenic 20.0%
!!! TAATGTTTGATTTCTATGTT+AGG - chr3_1:53020385-53020404 None:intergenic 20.0%
!!! TTCTGTTTTATAATTGAAGT+TGG + chr3_1:53021516-53021535 Msa0362150:intron 20.0%
!! AAAAGATCAAATACAATAAC+GGG - chr3_1:53021542-53021561 None:intergenic 20.0%
!! ACACCGTTAAAAAAAATAAA+AGG - chr3_1:53021773-53021792 None:intergenic 20.0%
!! CATGTTATACAGAAATAAAA+AGG - chr3_1:53021889-53021908 None:intergenic 20.0%
!! AAAGAAAAAATATCATGACA+CGG - chr3_1:53021944-53021963 None:intergenic 20.0%
!!! CATGATATTTTTTCTTTGAA+AGG + chr3_1:53021947-53021966 Msa0362150:intron 20.0%
!! TGTTATTGCAATTAATTCAT+CGG + chr3_1:53022245-53022264 Msa0362150:intron 20.0%
!!! AAATGAAATGGACTAAATAA+CGG - chr3_1:53022329-53022348 None:intergenic 20.0%
!! TATCAGGTAAAATTAAAGAA+GGG - chr3_1:53022742-53022761 None:intergenic 20.0%
!! TTATCAGGTAAAATTAAAGA+AGG - chr3_1:53022743-53022762 None:intergenic 20.0%
!!! TCACTAGTTTTTTTATGTTT+TGG + chr3_1:53022816-53022835 Msa0362150:intron 20.0%
!! TATAAACTATCTCAGTAATT+TGG - chr3_1:53023383-53023402 None:intergenic 20.0%
!! AATTACTGAGATAGTTTATA+AGG + chr3_1:53023383-53023402 Msa0362150:CDS 20.0%
!! ATTACTGAGATAGTTTATAA+GGG + chr3_1:53023384-53023403 Msa0362150:CDS 20.0%
!!! AAAAATTGGTTTATAGATTC+AGG + chr3_1:53024156-53024175 Msa0362150:intron 20.0%
!!! GATTTTAAAACACTTGTATA+AGG + chr3_1:53024626-53024645 Msa0362150:intron 20.0%
!! AAACAACTAATTACATGTAA+TGG + chr3_1:53024729-53024748 Msa0362150:intron 20.0%
!! TTTAATAAAATTGATATCCC+TGG - chr3_1:53025159-53025178 None:intergenic 20.0%
!! TAAAATAACAGATGAATTGA+TGG + chr3_1:53025844-53025863 Msa0362150:intron 20.0%
!! TGTATTTGATAAAAAGAATG+TGG + chr3_1:53026061-53026080 Msa0362150:intron 20.0%
!!! TTGTTATGTAAACGATTTTA+GGG - chr3_1:53026608-53026627 None:intergenic 20.0%
!!! TTTGTTATGTAAACGATTTT+AGG - chr3_1:53026609-53026628 None:intergenic 20.0%
!! ATATAAAAAGTCAACTTGAA+AGG - chr3_1:53026791-53026810 None:intergenic 20.0%
!! CTCATTTTAAACGTTTTCTA+AGG - chr3_1:53020330-53020349 None:intergenic 25.0%
!! TGTTTTCTTTTGCTTTCATT+GGG - chr3_1:53020361-53020380 None:intergenic 25.0%
!! ATGTTTTCTTTTGCTTTCAT+TGG - chr3_1:53020362-53020381 None:intergenic 25.0%
! TGTTTGTCTATGTTATTGAA+GGG - chr3_1:53020436-53020455 None:intergenic 25.0%
!!! TGTGTTTTTTCAGTTGAATT+TGG + chr3_1:53020926-53020945 Msa0362150:intron 25.0%
!!! GTGTTTTTTTCAGTTGAATT+TGG + chr3_1:53021048-53021067 Msa0362150:intron 25.0%
! AGTTGTATTTCAATTCACTT+AGG - chr3_1:53021097-53021116 None:intergenic 25.0%
!!! TGTATTTGATCTTTTTCACT+TGG + chr3_1:53021547-53021566 Msa0362150:intron 25.0%
!! GGTAGATTTTATTATATGAG+TGG + chr3_1:53021568-53021587 Msa0362150:intron 25.0%
! GTCATATTCTAATTTCCAAT+AGG - chr3_1:53021670-53021689 None:intergenic 25.0%
!!! ATTTTTTTTAACGGTGTTGT+AGG + chr3_1:53021776-53021795 Msa0362150:intron 25.0%
!!! TTTTTTTTAACGGTGTTGTA+GGG + chr3_1:53021777-53021796 Msa0362150:intron 25.0%
! TGTAAATTGGAGGTAAAAAA+TGG - chr3_1:53021816-53021835 None:intergenic 25.0%
! AATAACATCACATGCTTATT+TGG - chr3_1:53022102-53022121 None:intergenic 25.0%
! GATAAATCTGCTAATATTTC+TGG + chr3_1:53022186-53022205 Msa0362150:intron 25.0%
!! AACTCAGATGATTTTGTATT+TGG + chr3_1:53022211-53022230 Msa0362150:intron 25.0%
! GAAAGAGATGAAAAATGAAA+TGG - chr3_1:53022341-53022360 None:intergenic 25.0%
!!! TTTTTGAGCATTCATTTGAT+TGG + chr3_1:53022410-53022429 Msa0362150:intron 25.0%
!!! TAAGAGGGTTTTAGATTATA+TGG + chr3_1:53022446-53022465 Msa0362150:intron 25.0%
!!! TATTTTTTCTTATCTCTTGC+AGG + chr3_1:53022477-53022496 Msa0362150:intron 25.0%
! AGTAAAATTGTTCGTAAACA+TGG + chr3_1:53022696-53022715 Msa0362150:intron 25.0%
!!! CTAGTTTTTTTATGTTTTGG+TGG + chr3_1:53022819-53022838 Msa0362150:intron 25.0%
!! GCAAAAGTTTAAAACAGATT+CGG + chr3_1:53022851-53022870 Msa0362150:intron 25.0%
! ATAGACTTATTTCATCTGAA+GGG - chr3_1:53023074-53023093 None:intergenic 25.0%
!!! AGTTTTTTTACTTCACAGTT+AGG - chr3_1:53023339-53023358 None:intergenic 25.0%
! AGAAAGTCATATTATTTGCT+TGG - chr3_1:53023568-53023587 None:intergenic 25.0%
! AATTCTTGAATTGTAGACAA+TGG + chr3_1:53023597-53023616 Msa0362150:intron 25.0%
!!! GACAATGGCTTTAATAATTA+TGG + chr3_1:53023612-53023631 Msa0362150:intron 25.0%
! AAAAATACTTCTCGCTTATT+TGG + chr3_1:53024122-53024141 Msa0362150:intron 25.0%
! AAAATACTTCTCGCTTATTT+GGG + chr3_1:53024123-53024142 Msa0362150:intron 25.0%
!!! TGGGTAAGTTTTGAAAAAAT+TGG + chr3_1:53024142-53024161 Msa0362150:intron 25.0%
! CCATTTCAAAATTCTGTTAT+AGG - chr3_1:53024208-53024227 None:intergenic 25.0%
!!! CCTATAACAGAATTTTGAAA+TGG + chr3_1:53024205-53024224 Msa0362150:intron 25.0%
! AAAAGTTTGATCCTATGAAA+TGG + chr3_1:53024837-53024856 Msa0362150:intron 25.0%
!! GTCTATCAATTTTATCAACA+GGG - chr3_1:53025055-53025074 None:intergenic 25.0%
!! CTTGATAGTTAAGTATCTAA+CGG - chr3_1:53025213-53025232 None:intergenic 25.0%
! TATCTAGTTGAACTTTATTC+AGG + chr3_1:53025640-53025659 Msa0362150:intron 25.0%
!!! TTGTCATTTTCCAAATTCAT+TGG + chr3_1:53025739-53025758 Msa0362150:intron 25.0%
!!! TGTCATTTTCCAAATTCATT+GGG + chr3_1:53025740-53025759 Msa0362150:intron 25.0%
! AAAGTGAACTATTCTAATCT+AGG + chr3_1:53025784-53025803 Msa0362150:intron 25.0%
!!! ATTCTAATCTAGGTTAGTTT+CGG + chr3_1:53025794-53025813 Msa0362150:intron 25.0%
! TAGCAGATTATGGAAATTAA+TGG - chr3_1:53025948-53025967 None:intergenic 25.0%
!!! GTGTTTTGTTGCTTATTTTT+GGG + chr3_1:53026083-53026102 Msa0362150:intron 25.0%
!! TATGTTGTTATTACAGCTTT+CGG - chr3_1:53026197-53026216 None:intergenic 25.0%
! TTTAAAGATGAACTATCACT+CGG - chr3_1:53026536-53026555 None:intergenic 25.0%
GTGTTTGTCTATGTTATTGA+AGG - chr3_1:53020437-53020456 None:intergenic 30.0%
TTCATATTTGAGAGAAGAAC+AGG - chr3_1:53020743-53020762 None:intergenic 30.0%
TGTTCTTCTCTCAAATATGA+AGG + chr3_1:53020742-53020761 Msa0362150:CDS 30.0%
!!! ACTTCACTTTTTGAGATTCT+AGG + chr3_1:53020785-53020804 Msa0362150:intron 30.0%
!!! CTTCACTTTTTGAGATTCTA+GGG + chr3_1:53020786-53020805 Msa0362150:intron 30.0%
CAGTTGAATTTGGTCAAAAA+TGG + chr3_1:53021058-53021077 Msa0362150:intron 30.0%
ACTATACAAACACTGCATAT+CGG + chr3_1:53021313-53021332 Msa0362150:intron 30.0%
GTATATGTGCTTGTTTAATC+TGG + chr3_1:53021464-53021483 Msa0362150:intron 30.0%
! ATTATATGAGTGGTTTGTGT+TGG + chr3_1:53021578-53021597 Msa0362150:intron 30.0%
TGCTCAATATAGTAACCTAT+TGG + chr3_1:53021652-53021671 Msa0362150:intron 30.0%
! CTTTTTCCACATGTGTAAAT+TGG - chr3_1:53021829-53021848 None:intergenic 30.0%
TTGATGTTCATGTCATAGTT+CGG + chr3_1:53021981-53022000 Msa0362150:intron 30.0%
!! TATAATCAAGAGCATTACGA+GGG + chr3_1:53022386-53022405 Msa0362150:intron 30.0%
AATTCTAATTCTGTTGACGA+CGG + chr3_1:53022607-53022626 Msa0362150:CDS 30.0%
! GAACAATCGACTCAAATAAA+CGG + chr3_1:53022991-53023010 Msa0362150:CDS 30.0%
GATAGACTTATTTCATCTGA+AGG - chr3_1:53023075-53023094 None:intergenic 30.0%
GATACAATTGGCGAAAATAT+GGG + chr3_1:53023259-53023278 Msa0362150:CDS 30.0%
AAGAGAAGGTTTGACAATTT+AGG + chr3_1:53023771-53023790 Msa0362150:intron 30.0%
TTGTATAGTCATCAATGTGA+GGG - chr3_1:53024016-53024035 None:intergenic 30.0%
ATTGTATAGTCATCAATGTG+AGG - chr3_1:53024017-53024036 None:intergenic 30.0%
TGGTTTATAGATTCAGGAAT+AGG + chr3_1:53024162-53024181 Msa0362150:intron 30.0%
GGTTTATAGATTCAGGAATA+GGG + chr3_1:53024163-53024182 Msa0362150:intron 30.0%
GTAAATCTTAAGCTAATGCA+AGG + chr3_1:53024243-53024262 Msa0362150:intron 30.0%
GTCATGACTTAGTTAGTATA+CGG + chr3_1:53024345-53024364 Msa0362150:intron 30.0%
!!! TACGGAAGTGTTTTAAAAAC+CGG + chr3_1:53024363-53024382 Msa0362150:intron 30.0%
!!! AAGTGTTTTAAAATCCAGAC+CGG - chr3_1:53024621-53024640 None:intergenic 30.0%
CTAATTACATGTAATGGCTT+AGG + chr3_1:53024735-53024754 Msa0362150:intron 30.0%
CAAAGAAACACTGAAATAGT+TGG + chr3_1:53024797-53024816 Msa0362150:intron 30.0%
! ATCAATTTTATCAACAGGGT+GGG - chr3_1:53025051-53025070 None:intergenic 30.0%
! TATCAATTTTATCAACAGGG+TGG - chr3_1:53025052-53025071 None:intergenic 30.0%
! CGTCTATCAATTTTATCAAC+AGG - chr3_1:53025056-53025075 None:intergenic 30.0%
!! TAACTATCAAGAAAGTGTTG+AGG + chr3_1:53025222-53025241 Msa0362150:intron 30.0%
CAAATTTACTTCAATGCTCT+CGG + chr3_1:53025249-53025268 Msa0362150:intron 30.0%
AAATTTACTTCAATGCTCTC+GGG + chr3_1:53025250-53025269 Msa0362150:intron 30.0%
CATAACCATCATTATGTTGT+TGG - chr3_1:53025287-53025306 None:intergenic 30.0%
TATAACTCACTGTTAACCTA+TGG - chr3_1:53025312-53025331 None:intergenic 30.0%
TAGGTTAACAGTGAGTTATA+AGG + chr3_1:53025312-53025331 Msa0362150:intron 30.0%
!! AGTGAGTTATAAGGCATTTT+AGG + chr3_1:53025321-53025340 Msa0362150:intron 30.0%
!! GTGAGTTATAAGGCATTTTA+GGG + chr3_1:53025322-53025341 Msa0362150:intron 30.0%
!! TGAGTTATAAGGCATTTTAG+GGG + chr3_1:53025323-53025342 Msa0362150:intron 30.0%
GAAGGGCAATAAGATATTTA+GGG + chr3_1:53025350-53025369 Msa0362150:intron 30.0%
CTTATGACAAGGAATTTACA+AGG - chr3_1:53025585-53025604 None:intergenic 30.0%
AGTGTTGTCAGATCAAATAT+AGG + chr3_1:53025886-53025905 Msa0362150:intron 30.0%
ACACTAAATATGAATGTGCA+TGG + chr3_1:53025974-53025993 Msa0362150:intron 30.0%
!! GGTGTTTTGTTGCTTATTTT+TGG + chr3_1:53026082-53026101 Msa0362150:intron 30.0%
TATTACAAATGCACAAATGC+CGG + chr3_1:53026131-53026150 Msa0362150:CDS 30.0%
! TAGACTGTTTGGTCTATTTT+CGG - chr3_1:53026369-53026388 None:intergenic 30.0%
AAAATAGACCAAACAGTCTA+GGG + chr3_1:53026369-53026388 Msa0362150:CDS 30.0%
ACTATGAACAAACTTGAAAC+TGG - chr3_1:53026444-53026463 None:intergenic 30.0%
TTTAGTACACCAAAGTATAC+CGG - chr3_1:53026479-53026498 None:intergenic 30.0%
AACATGGGAAGAATAATGAT+GGG + chr3_1:53026581-53026600 Msa0362150:CDS 30.0%
! TTTTGCTTTCTTCGTTTTAC+TGG + chr3_1:53026658-53026677 Msa0362150:three_prime_UTR 30.0%
! TTTTACTGGTAAAGCTTCAA+AGG + chr3_1:53026672-53026691 Msa0362150:three_prime_UTR 30.0%
! GTTGAACAACACTTTTACAA+GGG - chr3_1:53026896-53026915 None:intergenic 30.0%
! AGTTGAACAACACTTTTACA+AGG - chr3_1:53026897-53026916 None:intergenic 30.0%
! CTAAGGGTATGTTCTTCTTA+TGG - chr3_1:53020313-53020332 None:intergenic 35.0%
! TCTTTTGCTTTCATTGGGTT+TGG - chr3_1:53020356-53020375 None:intergenic 35.0%
!! TTCGATTTGGATCTTCAGAA+TGG - chr3_1:53020568-53020587 None:intergenic 35.0%
GGTGATTCAAGAAAAGAAGT+CGG - chr3_1:53020722-53020741 None:intergenic 35.0%
ATCGGTTATCTCGAGAAAAT+TGG - chr3_1:53021163-53021182 None:intergenic 35.0%
! AATTTTCTCGAGATAACCGA+TGG + chr3_1:53021162-53021181 Msa0362150:intron 35.0%
! TTTTATATGCCACTGACACT+AGG - chr3_1:53021253-53021272 None:intergenic 35.0%
CTATACAAACACTGCATATC+GGG + chr3_1:53021314-53021333 Msa0362150:intron 35.0%
GTTAATTGTTGACGATGAGT+TGG + chr3_1:53021400-53021419 Msa0362150:intron 35.0%
TATGTGCTTGTTTAATCTGG+TGG + chr3_1:53021467-53021486 Msa0362150:intron 35.0%
!! AGGAAAAGCATCAACACAAA+AGG - chr3_1:53021753-53021772 None:intergenic 35.0%
TTACCTCCAATTTACACATG+TGG + chr3_1:53021820-53021839 Msa0362150:intron 35.0%
TTTCCACATGTGTAAATTGG+AGG - chr3_1:53021826-53021845 None:intergenic 35.0%
TGATGTTCATGTCATAGTTC+GGG + chr3_1:53021982-53022001 Msa0362150:intron 35.0%
AATCTTGAACTGCACATGTT+AGG - chr3_1:53022017-53022036 None:intergenic 35.0%
GTTCAAGATTCATGTGAGAA+TGG + chr3_1:53022027-53022046 Msa0362150:intron 35.0%
! TTCATGTGAGAATGGCTTTT+CGG + chr3_1:53022035-53022054 Msa0362150:intron 35.0%
GTTCCGCATATCTAATATCT+AGG + chr3_1:53022074-53022093 Msa0362150:intron 35.0%
GTGCCTAGATATTAGATATG+CGG - chr3_1:53022080-53022099 None:intergenic 35.0%
AAGCATGTGATGTTATTCTG+TGG + chr3_1:53022105-53022124 Msa0362150:intron 35.0%
! CATAGATTTTCCAGGTATCA+CGG + chr3_1:53022297-53022316 Msa0362150:intron 35.0%
!! CTATAATCAAGAGCATTACG+AGG + chr3_1:53022385-53022404 Msa0362150:intron 35.0%
ACCATATTTGATCTACTGTG+CGG - chr3_1:53022658-53022677 None:intergenic 35.0%
TTAGTGCACAGTTCATTATC+AGG - chr3_1:53022758-53022777 None:intergenic 35.0%
GTGCACTAAGTTATCAAGAT+AGG + chr3_1:53022769-53022788 Msa0362150:intron 35.0%
!!! ATTGTTTTGAACATCACTCC+TGG + chr3_1:53022900-53022919 Msa0362150:intron 35.0%
ATCATCATCACCTGTTCAAA+TGG + chr3_1:53023092-53023111 Msa0362150:CDS 35.0%
! CTGTTCAAATGGTTAGTTCA+GGG + chr3_1:53023103-53023122 Msa0362150:CDS 35.0%
! TGTTCAAATGGTTAGTTCAG+GGG + chr3_1:53023104-53023123 Msa0362150:CDS 35.0%
!! CATCTGATGATGGATACAAT+TGG + chr3_1:53023247-53023266 Msa0362150:CDS 35.0%
GGATACAATTGGCGAAAATA+TGG + chr3_1:53023258-53023277 Msa0362150:CDS 35.0%
TTCATCTTCTATTACCGTCT+CGG - chr3_1:53023509-53023528 None:intergenic 35.0%
! GGCACTGAGAAATTATAGAA+TGG - chr3_1:53023547-53023566 None:intergenic 35.0%
GTCAAACCAGAATAATGATG+AGG + chr3_1:53023725-53023744 Msa0362150:CDS 35.0%
CATCAACCTCATCATTATTC+TGG - chr3_1:53023734-53023753 None:intergenic 35.0%
ATGATCCTTTCTCAAAGAGA+AGG + chr3_1:53023757-53023776 Msa0362150:CDS 35.0%
! TCAAACCTTCTCTTTGAGAA+AGG - chr3_1:53023765-53023784 None:intergenic 35.0%
CCAACTTAATGTGCTTGTTT+CGG + chr3_1:53024057-53024076 Msa0362150:intron 35.0%
! TCTTTTCTGACTCATCAGTT+TGG + chr3_1:53024310-53024329 Msa0362150:intron 35.0%
!!! ACGGAAGTGTTTTAAAAACC+GGG + chr3_1:53024364-53024383 Msa0362150:intron 35.0%
! GTTGTATACCAGTACTGAAT+TGG + chr3_1:53024669-53024688 Msa0362150:intron 35.0%
!! ATGATGATGGTAGGTTCAAA+AGG + chr3_1:53024894-53024913 Msa0362150:intron 35.0%
TACGTCCAACAACATAATGA+TGG + chr3_1:53025279-53025298 Msa0362150:intron 35.0%
TAATGATGGTTATGTGCCAT+AGG + chr3_1:53025293-53025312 Msa0362150:intron 35.0%
!! TATAAGGCATTTTAGGGGAA+AGG + chr3_1:53025328-53025347 Msa0362150:intron 35.0%
GGAAGGGCAATAAGATATTT+AGG + chr3_1:53025349-53025368 Msa0362150:intron 35.0%
!!! TTGTGTTGTGAGTTGGTTTT+TGG + chr3_1:53025378-53025397 Msa0362150:intron 35.0%
AGAATCTCGTTGAATAGGAA+GGG + chr3_1:53025550-53025569 Msa0362150:intron 35.0%
GGTCAACTACAACAATCATT+GGG - chr3_1:53025693-53025712 None:intergenic 35.0%
AAGCCTTAGTGGTAAAATTG+GGG - chr3_1:53025714-53025733 None:intergenic 35.0%
CAAGCCTTAGTGGTAAAATT+GGG - chr3_1:53025715-53025734 None:intergenic 35.0%
ACAAGCCTTAGTGGTAAAAT+TGG - chr3_1:53025716-53025735 None:intergenic 35.0%
TGACAAAAAACAAGCCTTAG+TGG - chr3_1:53025725-53025744 None:intergenic 35.0%
! AGTTCACTTTATTGCTGCTT+CGG - chr3_1:53025774-53025793 None:intergenic 35.0%
GTGTTGTCAATAGCAGATTA+TGG - chr3_1:53025958-53025977 None:intergenic 35.0%
AGCTGTAATAACAACATACG+AGG + chr3_1:53026199-53026218 Msa0362150:CDS 35.0%
GCTGTAATAACAACATACGA+GGG + chr3_1:53026200-53026219 Msa0362150:CDS 35.0%
TAGTATCACTTTCTTCTTGC+CGG - chr3_1:53026310-53026329 None:intergenic 35.0%
GAAAATAGACCAAACAGTCT+AGG + chr3_1:53026368-53026387 Msa0362150:CDS 35.0%
AGAATGATGCGCAATGAATA+TGG + chr3_1:53026392-53026411 Msa0362150:CDS 35.0%
AATAACAGCGCAAATCCATA+TGG + chr3_1:53026497-53026516 Msa0362150:CDS 35.0%
!!! GGATTTTCTCTAGAACCATA+TGG - chr3_1:53026515-53026534 None:intergenic 35.0%
TTATTCTTCCCATGTTCTGT+GGG - chr3_1:53026577-53026596 None:intergenic 35.0%
ATTATTCTTCCCATGTTCTG+TGG - chr3_1:53026578-53026597 None:intergenic 35.0%
GAACATGGGAAGAATAATGA+TGG + chr3_1:53026580-53026599 Msa0362150:CDS 35.0%
TACTGCTAGTTCCTATCAAA+GGG - chr3_1:53026761-53026780 None:intergenic 35.0%
ATTGTGGTGAAGATGAGAGA+GGG - chr3_1:53020488-53020507 None:intergenic 40.0%
TCTGAAGATCCAAATCGAAC+CGG + chr3_1:53020569-53020588 Msa0362150:CDS 40.0%
TAGATACAAGCTGATGTCTC+CGG + chr3_1:53020643-53020662 Msa0362150:CDS 40.0%
!! TAACCGATGGATTGAATCCT+CGG + chr3_1:53021175-53021194 Msa0362150:intron 40.0%
AATCCTCGGTCAAATGGTTA+AGG + chr3_1:53021189-53021208 Msa0362150:intron 40.0%
ATCCTCGGTCAAATGGTTAA+GGG + chr3_1:53021190-53021209 Msa0362150:intron 40.0%
!! GAGCATTATTCTGGTTCTGT+TGG + chr3_1:53021336-53021355 Msa0362150:intron 40.0%
!! CATCACCATGGATTAGTTAG+TGG + chr3_1:53021859-53021878 Msa0362150:intron 40.0%
GGAATCCACTAACTAATCCA+TGG - chr3_1:53021867-53021886 None:intergenic 40.0%
TGAACTGCACATGTTAGGTT+AGG - chr3_1:53022012-53022031 None:intergenic 40.0%
!! TTTAGGGCCATAGATTTTCC+AGG + chr3_1:53022289-53022308 Msa0362150:intron 40.0%
CGTGATACCTGGAAAATCTA+TGG - chr3_1:53022299-53022318 None:intergenic 40.0%
! CTTGACTCGTAGAAACAAGT+TGG - chr3_1:53022363-53022382 None:intergenic 40.0%
! TGTTTGTTGAAGCCTAGGAA+GGG - chr3_1:53022527-53022546 None:intergenic 40.0%
! TGTACTGTTTGTTGAAGCCT+AGG - chr3_1:53022532-53022551 None:intergenic 40.0%
AGGCTTCAACAAACAGTACA+TGG + chr3_1:53022532-53022551 Msa0362150:CDS 40.0%
ATTAGAATTGAAGCACGCAG+AGG - chr3_1:53022596-53022615 None:intergenic 40.0%
ACCGCACAGTAGATCAAATA+TGG + chr3_1:53022654-53022673 Msa0362150:CDS 40.0%
AGTGTAAGTACTATGCAACC+AGG - chr3_1:53022921-53022940 None:intergenic 40.0%
CTGTGCTCTTCACTTGTTTA+AGG + chr3_1:53022939-53022958 Msa0362150:intron 40.0%
TCGACTCAAATAAACGGTCA+AGG + chr3_1:53022997-53023016 Msa0362150:CDS 40.0%
ACCACTGGTCAAAAGTGAAA+CGG + chr3_1:53023044-53023063 Msa0362150:CDS 40.0%
CCTGAACTAACCATTTGAAC+AGG - chr3_1:53023105-53023124 None:intergenic 40.0%
! CCTGTTCAAATGGTTAGTTC+AGG + chr3_1:53023102-53023121 Msa0362150:CDS 40.0%
! TGCTCATGTTGAAGTCGTTT+TGG + chr3_1:53023131-53023150 Msa0362150:CDS 40.0%
! CTTCAAGCATCACAAGTTGA+TGG + chr3_1:53023189-53023208 Msa0362150:CDS 40.0%
!! AAGCATCACAAGTTGATGGT+AGG + chr3_1:53023193-53023212 Msa0362150:CDS 40.0%
!! AGCATCACAAGTTGATGGTA+GGG + chr3_1:53023194-53023213 Msa0362150:CDS 40.0%
ACTTTCAGTTGCTGCTGATA+AGG + chr3_1:53023224-53023243 Msa0362150:CDS 40.0%
!! TATGGGCAGAAGCTTGTTAA+AGG + chr3_1:53023276-53023295 Msa0362150:CDS 40.0%
GTGCATTTGTAATAACTGCG+TGG - chr3_1:53023312-53023331 None:intergenic 40.0%
TATTTCCACCAGAGAATCGA+CGG - chr3_1:53023440-53023459 None:intergenic 40.0%
! CTACCATCATTTGCTGCTAT+AGG - chr3_1:53023684-53023703 None:intergenic 40.0%
! TTGTACACTTGCTGATCAAG+AGG + chr3_1:53023818-53023837 Msa0362150:intron 40.0%
AATGGATCTTGACATCACAC+CGG + chr3_1:53023861-53023880 Msa0362150:CDS 40.0%
TGTTGTACAAACTCTGAGTG+AGG + chr3_1:53023912-53023931 Msa0362150:CDS 40.0%
TCTGAGTGAGGTTGACATAT+TGG + chr3_1:53023924-53023943 Msa0362150:CDS 40.0%
GAGGTTGACATATTGGATGA+TGG + chr3_1:53023931-53023950 Msa0362150:CDS 40.0%
! TATTGGATGATGGTTATCGC+TGG + chr3_1:53023941-53023960 Msa0362150:CDS 40.0%
GTTATCGCTGGCGTAAATAT+GGG + chr3_1:53023953-53023972 Msa0362150:CDS 40.0%
CCGAAACAAGCACATTAAGT+TGG - chr3_1:53024060-53024079 None:intergenic 40.0%
!!! AAGTGTTTTAAAAACCGGGC+CGG + chr3_1:53024368-53024387 Msa0362150:intron 40.0%
AAGGTAAGCATTAGACAGCT+CGG + chr3_1:53024477-53024496 Msa0362150:intron 40.0%
!! TCCAGTCTTGTTATTGGATG+GGG - chr3_1:53024570-53024589 None:intergenic 40.0%
!! GTCCAGTCTTGTTATTGGAT+GGG - chr3_1:53024571-53024590 None:intergenic 40.0%
ATCCAATAACAAGACTGGAC+CGG + chr3_1:53024571-53024590 Msa0362150:intron 40.0%
!! ACTTGTATAAGGTTGATGCC+TGG + chr3_1:53024637-53024656 Msa0362150:intron 40.0%
!! CTTGTATAAGGTTGATGCCT+GGG + chr3_1:53024638-53024657 Msa0362150:intron 40.0%
!! GTATACAACATCGATTTCCC+AGG - chr3_1:53024658-53024677 None:intergenic 40.0%
TGTCAACTCCAATTCAGTAC+TGG - chr3_1:53024680-53024699 None:intergenic 40.0%
TTGGAGTTGACAAGTGATGA+TGG + chr3_1:53024688-53024707 Msa0362150:intron 40.0%
!! AGTTGACAAGTGATGATGGT+CGG + chr3_1:53024692-53024711 Msa0362150:intron 40.0%
!! GTGATGATGGTCGGTTAAAA+AGG + chr3_1:53024701-53024720 Msa0362150:intron 40.0%
GTCTACAGCATCCATTTCAT+AGG - chr3_1:53024851-53024870 None:intergenic 40.0%
TCTCAATGCCAATTCTACAC+TGG - chr3_1:53024873-53024892 None:intergenic 40.0%
! TTGGCATTGAGAGATGATGA+TGG + chr3_1:53024881-53024900 Msa0362150:intron 40.0%
!! CATTGAGAGATGATGATGGT+AGG + chr3_1:53024885-53024904 Msa0362150:intron 40.0%
! ACCACTGAGAAAGTATGAGT+AGG + chr3_1:53024975-53024994 Msa0362150:intron 40.0%
! CCACTGAGAAAGTATGAGTA+GGG + chr3_1:53024976-53024995 Msa0362150:intron 40.0%
! TGAGAAAGTATGAGTAGGGA+TGG + chr3_1:53024980-53024999 Msa0362150:intron 40.0%
TTTATCAACAGGGTGGGTAT+CGG - chr3_1:53025045-53025064 None:intergenic 40.0%
GCAGATATGCGCACATATAT+GGG - chr3_1:53025086-53025105 None:intergenic 40.0%
AGCAGATATGCGCACATATA+TGG - chr3_1:53025087-53025106 None:intergenic 40.0%
!! TTTAGCAGATTCTGAGGTGT+CGG + chr3_1:53025116-53025135 Msa0362150:intron 40.0%
AGCTCAGAATCTCGTTGAAT+AGG + chr3_1:53025545-53025564 Msa0362150:intron 40.0%
CAGAATCTCGTTGAATAGGA+AGG + chr3_1:53025549-53025568 Msa0362150:intron 40.0%
GAATCTCGTTGAATAGGAAG+GGG + chr3_1:53025551-53025570 Msa0362150:intron 40.0%
GTCAATACGAGCTTATGACA+AGG - chr3_1:53025596-53025615 None:intergenic 40.0%
GGGTCAACTACAACAATCAT+TGG - chr3_1:53025694-53025713 None:intergenic 40.0%
! TGACCCCAATTTTACCACTA+AGG + chr3_1:53025708-53025727 Msa0362150:intron 40.0%
TCCAAATTCATTGGGCACTT+AGG + chr3_1:53025748-53025767 Msa0362150:intron 40.0%
TACTTAGACCTTGATGAGCT+TGG + chr3_1:53026016-53026035 Msa0362150:intron 40.0%
ACTTAGACCTTGATGAGCTT+GGG + chr3_1:53026017-53026036 Msa0362150:intron 40.0%
! GTAACATTGCTGCTTATCAC+AGG + chr3_1:53026105-53026124 Msa0362150:intron 40.0%
GAGGCATAATAGTCATGACA+TGG + chr3_1:53026250-53026269 Msa0362150:CDS 40.0%
CATAATAGTCATGACATGGC+AGG + chr3_1:53026254-53026273 Msa0362150:CDS 40.0%
!! GATACTATTAGCCTTGACCT+TGG + chr3_1:53026323-53026342 Msa0362150:CDS 40.0%
!! TATTAGCCTTGACCTTGGAA+TGG + chr3_1:53026328-53026347 Msa0362150:CDS 40.0%
!! ATTAGCCTTGACCTTGGAAT+GGG + chr3_1:53026329-53026348 Msa0362150:CDS 40.0%
! ACTGTTTGGTCTATTTTCGG+CGG - chr3_1:53026366-53026385 None:intergenic 40.0%
ATCATTCTCCCTAGACTGTT+TGG - chr3_1:53026380-53026399 None:intergenic 40.0%
CTACTGCTAGTTCCTATCAA+AGG - chr3_1:53026762-53026781 None:intergenic 40.0%
! CACTTTTACAAGGGTTCTTG+TGG - chr3_1:53026887-53026906 None:intergenic 40.0%
TTGTGGTGAAGATGAGAGAG+GGG - chr3_1:53020487-53020506 None:intergenic 45.0%
CATTGTGGTGAAGATGAGAG+AGG - chr3_1:53020489-53020508 None:intergenic 45.0%
CTCTCTCATCTTCACCACAA+TGG + chr3_1:53020487-53020506 Msa0362150:exon 45.0%
CTGAAGATCCAAATCGAACC+GGG + chr3_1:53020570-53020589 Msa0362150:CDS 45.0%
! CATCAGCTTGTATCTAGCTC+CGG - chr3_1:53020639-53020658 None:intergenic 45.0%
AAAGAAGTCGGACTAAGTCC+CGG - chr3_1:53020710-53020729 None:intergenic 45.0%
TTAGTCTCTGCTATTGTGCG+CGG - chr3_1:53021131-53021150 None:intergenic 45.0%
TGACCGAGGATTCAATCCAT+CGG - chr3_1:53021181-53021200 None:intergenic 45.0%
GGATTGAATCCTCGGTCAAA+TGG + chr3_1:53021183-53021202 Msa0362150:intron 45.0%
AACCCTTAACCATTTGACCG+AGG - chr3_1:53021195-53021214 None:intergenic 45.0%
TATATGCCACTGACACTAGG+TGG - chr3_1:53021250-53021269 None:intergenic 45.0%
!! GCATATCGGGAGCATTATTC+TGG + chr3_1:53021327-53021346 Msa0362150:intron 45.0%
AGCGAATAGATGCATCACCA+TGG + chr3_1:53021847-53021866 Msa0362150:intron 45.0%
TGTTCATGTCATAGTTCGGG+TGG + chr3_1:53021985-53022004 Msa0362150:intron 45.0%
AAACAGCAGCCAATGGAGAA+CGG - chr3_1:53022272-53022291 None:intergenic 45.0%
! TTCTCCATTGGCTGCTGTTT+AGG + chr3_1:53022272-53022291 Msa0362150:intron 45.0%
! TCTCCATTGGCTGCTGTTTA+GGG + chr3_1:53022273-53022292 Msa0362150:intron 45.0%
GTAGAACCTTCACCTACAAC+AGG + chr3_1:53022499-53022518 Msa0362150:CDS 45.0%
! CTGTTTGTTGAAGCCTAGGA+AGG - chr3_1:53022528-53022547 None:intergenic 45.0%
CGGTTTGAACTCAAAGAAGC+TGG - chr3_1:53022638-53022657 None:intergenic 45.0%
GGTTGTCGTGTACAGTATTC+TGG + chr3_1:53022872-53022891 Msa0362150:intron 45.0%
GCATGGTTGTAAAAGTCAGC+AGG - chr3_1:53022967-53022986 None:intergenic 45.0%
GAGTCGATTGTTCACATGCA+TGG - chr3_1:53022984-53023003 None:intergenic 45.0%
! ATCTTTTGTCTCGTCACCAC+TGG + chr3_1:53023029-53023048 Msa0362150:CDS 45.0%
TTGGACGAATCAAATCCCAG+TGG + chr3_1:53023150-53023169 Msa0362150:CDS 45.0%
!! GCATCACAAGTTGATGGTAG+GGG + chr3_1:53023195-53023214 Msa0362150:CDS 45.0%
! GCTGATAAGGCATCTGATGA+TGG + chr3_1:53023237-53023256 Msa0362150:CDS 45.0%
CTCTTTGAACGCTCTCATGA+TGG + chr3_1:53023357-53023376 Msa0362150:CDS 45.0%
TGATGTCTGTGCAAGAAGAG+AGG + chr3_1:53023460-53023479 Msa0362150:CDS 45.0%
TGCAAGAAGAGAGGTCTGAT+AGG + chr3_1:53023469-53023488 Msa0362150:CDS 45.0%
GCAAGAAGAGAGGTCTGATA+GGG + chr3_1:53023470-53023489 Msa0362150:CDS 45.0%
GCTTCTTTAACTAGCCGAGA+CGG + chr3_1:53023492-53023511 Msa0362150:CDS 45.0%
TCGCCTATAGCAGCAAATGA+TGG + chr3_1:53023678-53023697 Msa0362150:CDS 45.0%
AGCAAATGATGGTAGTCCAG+AGG + chr3_1:53023689-53023708 Msa0362150:CDS 45.0%
GCAAATGATGGTAGTCCAGA+GGG + chr3_1:53023690-53023709 Msa0362150:CDS 45.0%
AGAGTTTGTACAACAACCCG+TGG - chr3_1:53023907-53023926 None:intergenic 45.0%
GGTTATCGCTGGCGTAAATA+TGG + chr3_1:53023952-53023971 Msa0362150:CDS 45.0%
TATGGGCAGAAGGTTGTAAG+AGG + chr3_1:53023970-53023989 Msa0362150:CDS 45.0%
TAAGAGGCAATCCTAACCCT+AGG + chr3_1:53023986-53024005 Msa0362150:CDS 45.0%
! TCAATGTGAGGGCATACCTA+GGG - chr3_1:53024005-53024024 None:intergenic 45.0%
! ATCAATGTGAGGGCATACCT+AGG - chr3_1:53024006-53024025 None:intergenic 45.0%
!! TCACTGGTTCACTGGTCTAA+GGG + chr3_1:53024408-53024427 Msa0362150:intron 45.0%
AGGTAAGCATTAGACAGCTC+GGG + chr3_1:53024478-53024497 Msa0362150:intron 45.0%
GCATTTAAACCGGTGGAAAC+CGG - chr3_1:53024544-53024563 None:intergenic 45.0%
GATGGGGCATGCATTTAAAC+CGG - chr3_1:53024554-53024573 None:intergenic 45.0%
!! GGTCCAGTCTTGTTATTGGA+TGG - chr3_1:53024572-53024591 None:intergenic 45.0%
!! AACCGGTCCAGTCTTGTTAT+TGG - chr3_1:53024576-53024595 None:intergenic 45.0%
GCTGTAGACCAGTGTAGAAT+TGG + chr3_1:53024862-53024881 Msa0362150:intron 45.0%
CCCTACTCATACTTTCTCAG+TGG - chr3_1:53024979-53024998 None:intergenic 45.0%
CAATGACCATGGGTATCATC+TGG + chr3_1:53025003-53025022 Msa0362150:intron 45.0%
TATGCGCACATATATGGGCA+GGG - chr3_1:53025081-53025100 None:intergenic 45.0%
ATATGCGCACATATATGGGC+AGG - chr3_1:53025082-53025101 None:intergenic 45.0%
ATGTGCGCATATCTGCTAGA+CGG + chr3_1:53025090-53025109 Msa0362150:intron 45.0%
CGGGTATTTAGCAGATTCTG+AGG + chr3_1:53025110-53025129 Msa0362150:intron 45.0%
!! AGGCATTTTAGGGGAAAGGA+AGG + chr3_1:53025332-53025351 Msa0362150:intron 45.0%
!! GGCATTTTAGGGGAAAGGAA+GGG + chr3_1:53025333-53025352 Msa0362150:intron 45.0%
GGTGTGTTTGTGTTGTGAGT+TGG + chr3_1:53025371-53025390 Msa0362150:intron 45.0%
GCCTAAGTGCCCAATGAATT+TGG - chr3_1:53025752-53025771 None:intergenic 45.0%
CAAATCTCCCAAGCTCATCA+AGG - chr3_1:53026027-53026046 None:intergenic 45.0%
! TCTCCACGTGTTTTCTAACC+GGG - chr3_1:53026160-53026179 None:intergenic 45.0%
! CTCTCCACGTGTTTTCTAAC+CGG - chr3_1:53026161-53026180 None:intergenic 45.0%
GGTTAGAAAACACGTGGAGA+GGG + chr3_1:53026160-53026179 Msa0362150:CDS 45.0%
ATCATGATGTACCAACTGCG+AGG + chr3_1:53026231-53026250 Msa0362150:CDS 45.0%
TGACTATTATGCCTCGCAGT+TGG - chr3_1:53026245-53026264 None:intergenic 45.0%
! TTGGTCTATTTTCGGCGGTT+GGG - chr3_1:53026361-53026380 None:intergenic 45.0%
! TTTGGTCTATTTTCGGCGGT+TGG - chr3_1:53026362-53026381 None:intergenic 45.0%
GGCGACAGTCAAACACATAA+CGG + chr3_1:53026413-53026432 Msa0362150:CDS 45.0%
! TCATAGTTCTACACCACCTC+CGG + chr3_1:53026457-53026476 Msa0362150:CDS 45.0%
AGTACACCAAAGTATACCGG+AGG - chr3_1:53026476-53026495 None:intergenic 45.0%
ATATCCTTGCCCACAGAACA+TGG + chr3_1:53026565-53026584 Msa0362150:CDS 45.0%
TATCCTTGCCCACAGAACAT+GGG + chr3_1:53026566-53026585 Msa0362150:CDS 45.0%
!!! AATTAATGTTATTATTTTTT+GGG + chr3_1:53021359-53021378 Msa0362150:intron 5.0%
!! AAAAAAAAAAAAAAAAACTT+TGG + chr3_1:53024092-53024111 Msa0362150:intron 5.0%
!! TTATATAATTAAATACATAT+TGG + chr3_1:53024922-53024941 Msa0362150:intron 5.0%
AGAATGGTGTTCCGTTTCGC+CGG - chr3_1:53020552-53020571 None:intergenic 50.0%
! GAAGATGACCCGGTTCGATT+TGG - chr3_1:53020581-53020600 None:intergenic 50.0%
!! CGACCCGATTCTGTTTCTGA+CGG + chr3_1:53020602-53020621 Msa0362150:CDS 50.0%
GGTCCGTCAGAAACAGAATC+GGG - chr3_1:53020608-53020627 None:intergenic 50.0%
GGGTCCGTCAGAAACAGAAT+CGG - chr3_1:53020609-53020628 None:intergenic 50.0%
AAAACCGGCGACCTAGAGAT+CGG - chr3_1:53020677-53020696 None:intergenic 50.0%
GTATCTACCACTTGTGCCGT+CGG + chr3_1:53021218-53021237 Msa0362150:intron 50.0%
TGAAGTCCACCTAGTGTCAG+TGG + chr3_1:53021241-53021260 Msa0362150:intron 50.0%
TTCATCGGTCCGTTCTCCAT+TGG + chr3_1:53022260-53022279 Msa0362150:intron 50.0%
TGGACAGTTGCTGCAGTAAG+AGG + chr3_1:53022430-53022449 Msa0362150:intron 50.0%
GGACAGTTGCTGCAGTAAGA+GGG + chr3_1:53022431-53022450 Msa0362150:intron 50.0%
AGAGGTTACAGGAAACGCAG+CGG - chr3_1:53022578-53022597 None:intergenic 50.0%
TTGAAGCACGCAGAGGTTAC+AGG - chr3_1:53022589-53022608 None:intergenic 50.0%
!! GCCGTTTCACTTTTGACCAG+TGG - chr3_1:53023048-53023067 None:intergenic 50.0%
!! CAAGTTGATGGTAGGGGTAG+TGG + chr3_1:53023201-53023220 Msa0362150:CDS 50.0%
CACCGGTAGTTAAGCCTATC+CGG + chr3_1:53023878-53023897 Msa0362150:CDS 50.0%
ACCGGTAGTTAAGCCTATCC+GGG + chr3_1:53023879-53023898 Msa0362150:CDS 50.0%
TCCCGGATAGGCTTAACTAC+CGG - chr3_1:53023883-53023902 None:intergenic 50.0%
CTGGCGTAAATATGGGCAGA+AGG + chr3_1:53023960-53023979 Msa0362150:CDS 50.0%
AGTGAACCAGTGACCTTACC+GGG - chr3_1:53024401-53024420 None:intergenic 50.0%
CAGTGAACCAGTGACCTTAC+CGG - chr3_1:53024402-53024421 None:intergenic 50.0%
!! GTCACTGGTTCACTGGTCTA+AGG + chr3_1:53024407-53024426 Msa0362150:intron 50.0%
GCCCCATCCAATAACAAGAC+TGG + chr3_1:53024566-53024585 Msa0362150:intron 50.0%
AAAATCCAGACCGGTCGAAC+CGG - chr3_1:53024612-53024631 None:intergenic 50.0%
AGTAGGGATGGCAATGACCA+TGG + chr3_1:53024992-53025011 Msa0362150:intron 50.0%
GTAGGGATGGCAATGACCAT+GGG + chr3_1:53024993-53025012 Msa0362150:intron 50.0%
TCTGTGCCAGATGATACCCA+TGG - chr3_1:53025012-53025031 None:intergenic 50.0%
TGTGCGCATATCTGCTAGAC+GGG + chr3_1:53025091-53025110 Msa0362150:intron 50.0%
CGGGTAGTTGCAGATATCCA+GGG + chr3_1:53025139-53025158 Msa0362150:intron 50.0%
!! CTAGGTTAGTTTCGGTGCAG+CGG + chr3_1:53025802-53025821 Msa0362150:intron 50.0%
! GTGTTTTCTAACCGGGCAAC+CGG - chr3_1:53026153-53026172 None:intergenic 50.0%
TTGCCCGGTTAGAAAACACG+TGG + chr3_1:53026154-53026173 Msa0362150:CDS 50.0%
CGGTTAGAAAACACGTGGAG+AGG + chr3_1:53026159-53026178 Msa0362150:CDS 50.0%
CAGGTGGACAGACAAGAATC+CGG + chr3_1:53026288-53026307 Msa0362150:CDS 50.0%
TGAGACCCATTCCAAGGTCA+AGG - chr3_1:53026337-53026356 None:intergenic 50.0%
ACACCACCTCCGGTATACTT+TGG + chr3_1:53026467-53026486 Msa0362150:CDS 50.0%
ACACCAAAGTATACCGGAGG+TGG - chr3_1:53026473-53026492 None:intergenic 50.0%
GTGGGCAAGGATATGCAGAA+CGG - chr3_1:53026559-53026578 None:intergenic 50.0%
CAGCTCTCAGACAGTGTGAT+AGG - chr3_1:53026738-53026757 None:intergenic 50.0%
TCTGAGAGCTGCCCTTTGAT+AGG + chr3_1:53026747-53026766 Msa0362150:three_prime_UTR 50.0%
GGGAGATTGTCGCCGGAATT+GGG - chr3_1:53020528-53020547 None:intergenic 55.0%
ATCGGGTCGTGAAGATGACC+CGG - chr3_1:53020591-53020610 None:intergenic 55.0%
! TATCTAGCTCCGGAGGTGGT+GGG - chr3_1:53020629-53020648 None:intergenic 55.0%
! CTTGTATCTAGCTCCGGAGG+TGG - chr3_1:53020633-53020652 None:intergenic 55.0%
! CAGCTTGTATCTAGCTCCGG+AGG - chr3_1:53020636-53020655 None:intergenic 55.0%
CTAGAGATCGGAAGCTTCGC+CGG - chr3_1:53020665-53020684 None:intergenic 55.0%
! CACTAGGTGGACTTCACCGA+CGG - chr3_1:53021237-53021256 None:intergenic 55.0%
TGGCCCTAAACAGCAGCCAA+TGG - chr3_1:53022279-53022298 None:intergenic 55.0%
ACGGCAACTTCCGTGATACC+TGG - chr3_1:53022310-53022329 None:intergenic 55.0%
AGGGAGCCTGTTGTAGGTGA+AGG - chr3_1:53022508-53022527 None:intergenic 55.0%
CTAGGAAGGGAGCCTGTTGT+AGG - chr3_1:53022514-53022533 None:intergenic 55.0%
CTACAACAGGCTCCCTTCCT+AGG + chr3_1:53022512-53022531 Msa0362150:CDS 55.0%
! CCAGTTGCTTTGCTGCCACT+GGG - chr3_1:53023168-53023187 None:intergenic 55.0%
CCAGTGGCAGCAAAGCAACT+GGG + chr3_1:53023166-53023185 Msa0362150:CDS 55.0%
!! CGACGGCTTGGTTGAGGTTT+AGG - chr3_1:53023423-53023442 None:intergenic 55.0%
!! GAGAATCGACGGCTTGGTTG+AGG - chr3_1:53023429-53023448 None:intergenic 55.0%
!! CAACCAAGCCGTCGATTCTC+TGG + chr3_1:53023429-53023448 Msa0362150:CDS 55.0%
GCTGCTATAGGCGATAGCTC+AGG - chr3_1:53023672-53023691 None:intergenic 55.0%
! ATGGTAGTCCAGAGGGTGCA+GGG + chr3_1:53023697-53023716 Msa0362150:CDS 55.0%
GACAAAAACCCTGCACCCTC+TGG - chr3_1:53023708-53023727 None:intergenic 55.0%
TTAAGCCTATCCGGGAGCCA+CGG + chr3_1:53023887-53023906 Msa0362150:CDS 55.0%
! GTGAGGGCATACCTAGGGTT+AGG - chr3_1:53024000-53024019 None:intergenic 55.0%
!! CGGTAAGGTCACTGGTTCAC+TGG + chr3_1:53024400-53024419 Msa0362150:intron 55.0%
TGCAGAAACCCCCGGTTTAC+CGG + chr3_1:53024502-53024521 Msa0362150:intron 55.0%
!!! AACCCCCGGTTTACCGGTTT+TGG + chr3_1:53024508-53024527 Msa0362150:intron 55.0%
ACCGGCCAAAACCGGTAAAC+CGG - chr3_1:53024516-53024535 None:intergenic 55.0%
GGGGCATGCATTTAAACCGG+TGG - chr3_1:53024551-53024570 None:intergenic 55.0%
AAATCCAGACCGGTCGAACC+GGG - chr3_1:53024611-53024630 None:intergenic 55.0%
!! AGCAGATTCTGAGGTGTCGG+CGG + chr3_1:53025119-53025138 Msa0362150:intron 55.0%
GCGGGTAGTTGCAGATATCC+AGG + chr3_1:53025138-53025157 Msa0362150:intron 55.0%
! TAGTTTCGGTGCAGCGGTTG+TGG + chr3_1:53025808-53025827 Msa0362150:intron 55.0%
GTAGCAACACTGCAGCGAAG+TGG + chr3_1:53025911-53025930 Msa0362150:intron 55.0%
! ATGCACAAATGCCGGTTGCC+CGG + chr3_1:53026139-53026158 Msa0362150:CDS 55.0%
TTGGGCTGAGACCCATTCCA+AGG - chr3_1:53026343-53026362 None:intergenic 55.0%
CTTCCCATGTTCTGTGGGCA+AGG - chr3_1:53026572-53026591 None:intergenic 55.0%
TTCACCACAATGGACGCCGC+CGG + chr3_1:53020497-53020516 Msa0362150:exon 60.0%
! TCGCCGGAATTGGGTATCGC+CGG - chr3_1:53020519-53020538 None:intergenic 60.0%
CGGGAGATTGTCGCCGGAAT+TGG - chr3_1:53020529-53020548 None:intergenic 60.0%
ACAATCTCCCGCCGGCGAAA+CGG + chr3_1:53020538-53020557 Msa0362150:CDS 60.0%
ATGGTGTTCCGTTTCGCCGG+CGG - chr3_1:53020549-53020568 None:intergenic 60.0%
! GTATCTAGCTCCGGAGGTGG+TGG - chr3_1:53020630-53020649 None:intergenic 60.0%
CGGCGAAGCTTCCGATCTCT+AGG + chr3_1:53020663-53020682 Msa0362150:CDS 60.0%
GCTTCCGATCTCTAGGTCGC+CGG + chr3_1:53020670-53020689 Msa0362150:CDS 60.0%
!! GCCGGTTTTGACGATTCCGC+CGG + chr3_1:53020688-53020707 Msa0362150:CDS 60.0%
CCCGGCGGAATCGTCAAAAC+CGG - chr3_1:53020692-53020711 None:intergenic 60.0%
!! CCGGTTTTGACGATTCCGCC+GGG + chr3_1:53020689-53020708 Msa0362150:CDS 60.0%
GAAGTCGGACTAAGTCCCGG+CGG - chr3_1:53020707-53020726 None:intergenic 60.0%
GTCTCTGCTATTGTGCGCGG+AGG - chr3_1:53021128-53021147 None:intergenic 60.0%
GACTTCACCGACGGCACAAG+TGG - chr3_1:53021228-53021247 None:intergenic 60.0%
CCCAGTGGCAGCAAAGCAAC+TGG + chr3_1:53023165-53023184 Msa0362150:CDS 60.0%
! CCCAGTTGCTTTGCTGCCAC+TGG - chr3_1:53023169-53023188 None:intergenic 60.0%
CCACCAGAGAATCGACGGCT+TGG - chr3_1:53023435-53023454 None:intergenic 60.0%
!! CCAAGCCGTCGATTCTCTGG+TGG + chr3_1:53023432-53023451 Msa0362150:CDS 60.0%
! GATGGTAGTCCAGAGGGTGC+AGG + chr3_1:53023696-53023715 Msa0362150:CDS 60.0%
TAAGCCTATCCGGGAGCCAC+GGG + chr3_1:53023888-53023907 Msa0362150:CDS 60.0%
GTACAACAACCCGTGGCTCC+CGG - chr3_1:53023900-53023919 None:intergenic 60.0%
GACCTTACCGGGTCGATGAC+CGG - chr3_1:53024390-53024409 None:intergenic 60.0%
CATCGACCCGGTAAGGTCAC+TGG + chr3_1:53024392-53024411 Msa0362150:intron 60.0%
GGCCAAAACCGGTAAACCGG+GGG - chr3_1:53024513-53024532 None:intergenic 60.0%
CGGCCAAAACCGGTAAACCG+GGG - chr3_1:53024514-53024533 None:intergenic 60.0%
CCGGCCAAAACCGGTAAACC+GGG - chr3_1:53024515-53024534 None:intergenic 60.0%
!!! CCCGGTTTACCGGTTTTGGC+CGG + chr3_1:53024512-53024531 Msa0362150:intron 60.0%
GACTGGACCGGTTACCCATC+CGG + chr3_1:53024583-53024602 Msa0362150:intron 60.0%
!! GCAGATTCTGAGGTGTCGGC+GGG + chr3_1:53025120-53025139 Msa0362150:intron 60.0%
! TTTCGGTGCAGCGGTTGTGG+TGG + chr3_1:53025811-53025830 Msa0362150:intron 60.0%
! TTCGGTGCAGCGGTTGTGGT+GGG + chr3_1:53025812-53025831 Msa0362150:intron 60.0%
ATGGCAGGACCATCAGCTGC+AGG + chr3_1:53026269-53026288 Msa0362150:CDS 60.0%
GTCTGTCCACCTGCAGCTGA+TGG - chr3_1:53026281-53026300 None:intergenic 60.0%
! CCGGAATTGGGTATCGCCGG+CGG - chr3_1:53020516-53020535 None:intergenic 65.0%
CCGCCGGCGATACCCAATTC+CGG + chr3_1:53020513-53020532 Msa0362150:CDS 65.0%
TTCCGGCGACAATCTCCCGC+CGG + chr3_1:53020530-53020549 Msa0362150:CDS 65.0%
TGGTGTTCCGTTTCGCCGGC+GGG - chr3_1:53020548-53020567 None:intergenic 65.0%
! TCTGACGGACCCACCACCTC+CGG + chr3_1:53020617-53020636 Msa0362150:CDS 65.0%
ACAACCCGTGGCTCCCGGAT+AGG - chr3_1:53023895-53023914 None:intergenic 65.0%
! GCTCGGGTTGCAGAAACCCC+CGG + chr3_1:53024494-53024513 Msa0362150:intron 65.0%
CGGCACGAACCGGCCAAAAC+CGG - chr3_1:53024524-53024543 None:intergenic 65.0%
!!! CGGTTTTGGCCGGTTCGTGC+CGG + chr3_1:53024522-53024541 Msa0362150:intron 65.0%
CGGTGGAAACCGGCACGAAC+CGG - chr3_1:53024534-53024553 None:intergenic 65.0%
!! CGGTTCGTGCCGGTTTCCAC+CGG + chr3_1:53024532-53024551 Msa0362150:intron 65.0%
CCGGGAACCGGATGGGTAAC+CGG - chr3_1:53024593-53024612 None:intergenic 65.0%
CCGGTTACCCATCCGGTTCC+CGG + chr3_1:53024590-53024609 Msa0362150:intron 65.0%
GGTCGAACCGGGAACCGGAT+GGG - chr3_1:53024600-53024619 None:intergenic 65.0%
! CATCCGGTTCCCGGTTCGAC+CGG + chr3_1:53024599-53024618 Msa0362150:intron 65.0%
AGACCGGTCGAACCGGGAAC+CGG - chr3_1:53024605-53024624 None:intergenic 65.0%
GCAGGACCATCAGCTGCAGG+TGG + chr3_1:53026272-53026291 Msa0362150:CDS 65.0%
ATCGCCGGCGGCGTCCATTG+TGG - chr3_1:53020504-53020523 None:intergenic 70.0%
AACCGGGCCGGTCATCGACC+CGG + chr3_1:53024380-53024399 Msa0362150:intron 70.0%
TACCGGGTCGATGACCGGCC+CGG - chr3_1:53024385-53024404 None:intergenic 70.0%
GGCCGGTCATCGACCCGGTA+AGG + chr3_1:53024385-53024404 Msa0362150:intron 70.0%
CGGTCGAACCGGGAACCGGA+TGG - chr3_1:53024601-53024620 None:intergenic 70.0%
! GGTTCCCGGTTCGACCGGTC+TGG + chr3_1:53024604-53024623 Msa0362150:intron 70.0%
CGCCGGCGGGAGATTGTCGC+CGG - chr3_1:53020535-53020554 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 53020306 53026948 53020306 ID=Msa0362150;Name=Msa0362150
chr3_1 mRNA 53020306 53026948 53020306 ID=Msa0362150-mRNA-1;Parent=Msa0362150;Name=Msa0362150-mRNA-1;_AED=0.09;_eAED=0.09;_QI=200|1|1|1|0.8|1|6|338|595
chr3_1 exon 53020306 53020763 53020306 ID=Msa0362150-mRNA-1:exon:9610;Parent=Msa0362150-mRNA-1
chr3_1 exon 53022499 53022675 53022499 ID=Msa0362150-mRNA-1:exon:9611;Parent=Msa0362150-mRNA-1
chr3_1 exon 53022961 53023513 53022961 ID=Msa0362150-mRNA-1:exon:9612;Parent=Msa0362150-mRNA-1
chr3_1 exon 53023613 53023778 53023613 ID=Msa0362150-mRNA-1:exon:9613;Parent=Msa0362150-mRNA-1
chr3_1 exon 53023858 53024007 53023858 ID=Msa0362150-mRNA-1:exon:9614;Parent=Msa0362150-mRNA-1
chr3_1 exon 53026127 53026948 53026127 ID=Msa0362150-mRNA-1:exon:9615;Parent=Msa0362150-mRNA-1
chr3_1 five_prime_UTR 53020306 53020505 53020306 ID=Msa0362150-mRNA-1:five_prime_utr;Parent=Msa0362150-mRNA-1
chr3_1 CDS 53020506 53020763 53020506 ID=Msa0362150-mRNA-1:cds;Parent=Msa0362150-mRNA-1
chr3_1 CDS 53022499 53022675 53022499 ID=Msa0362150-mRNA-1:cds;Parent=Msa0362150-mRNA-1
chr3_1 CDS 53022961 53023513 53022961 ID=Msa0362150-mRNA-1:cds;Parent=Msa0362150-mRNA-1
chr3_1 CDS 53023613 53023778 53023613 ID=Msa0362150-mRNA-1:cds;Parent=Msa0362150-mRNA-1
chr3_1 CDS 53023858 53024007 53023858 ID=Msa0362150-mRNA-1:cds;Parent=Msa0362150-mRNA-1
chr3_1 CDS 53026127 53026610 53026127 ID=Msa0362150-mRNA-1:cds;Parent=Msa0362150-mRNA-1
chr3_1 three_prime_UTR 53026611 53026948 53026611 ID=Msa0362150-mRNA-1:three_prime_utr;Parent=Msa0362150-mRNA-1
Gene Sequence

>Msa0362150

ATGGACGCCGCCGGCGATACCCAATTCCGGCGACAATCTCCCGCCGGCGAAACGGAACACCATTCTGAAGATCCAAATCGAACCGGGTCATCTTCACGACCCGATTCTGTTTCTGACGGACCCACCACCTCCGGAGCTAGATACAAGCTGATGTCTCCGGCGAAGCTTCCGATCTCTAGGTCGCCGGTTTTGACGATTCCGCCGGGACTTAGTCCGACTTCTTTTCTTGAATCACCTGTTCTTCTCTCAAATATGAAGGTAGAACCTTCACCTACAACAGGCTCCCTTCCTAGGCTTCAACAAACAGTACATGGTTTTGTATCTTCTTCTACGTCCGCTGCGTTTCCTGTAACCTCTGCGTGCTTCAATTCTAATTCTGTTGACGACGGAAAATCCAGCTTCTTTGAGTTCAAACCGCACAGTAGATCAAATATGGTTCCTGCTGACTTTTACAACCATGCATGTGAACAATCGACTCAAATAAACGGTCAAGGAAATGCTAAATCTTTTGTCTCGTCACCACTGGTCAAAAGTGAAACGGCAGTCCCTTCAGATGAAATAAGTCTATCATCATCACCTGTTCAAATGGTTAGTTCAGGGGCTAGTGCTCATGTTGAAGTCGTTTTGGACGAATCAAATCCCAGTGGCAGCAAAGCAACTGGGCTTCAAGCATCACAAGTTGATGGTAGGGGTAGTGGACTTTCAGTTGCTGCTGATAAGGCATCTGATGATGGATACAATTGGCGAAAATATGGGCAGAAGCTTGTTAAAGGATGTGAATTTCCACGCAGTTATTACAAATGCACACATCCTAACTGTGAAGTAAAAAAACTCTTTGAACGCTCTCATGATGGCCAAATTACTGAGATAGTTTATAAGGGAACGCATGATCATCCTAAACCTCAACCAAGCCGTCGATTCTCTGGTGGAAATATGATGTCTGTGCAAGAAGAGAGGTCTGATAGGGCTTCTTTAACTAGCCGAGACGACAATGGCTTTAATAATTATGGTCAGATGTCTCATGCAGCTGAGCGTGACAGTACTCCTGAGCTATCGCCTATAGCAGCAAATGATGGTAGTCCAGAGGGTGCAGGGTTTTTGTCAAACCAGAATAATGATGAGGTTGATGAAGATGATCCTTTCTCAAAGAGAAGAAAAATGGATCTTGACATCACACCGGTAGTTAAGCCTATCCGGGAGCCACGGGTTGTTGTACAAACTCTGAGTGAGGTTGACATATTGGATGATGGTTATCGCTGGCGTAAATATGGGCAGAAGGTTGTAAGAGGCAATCCTAACCCTAGGAGTTATTACAAATGCACAAATGCCGGTTGCCCGGTTAGAAAACACGTGGAGAGGGCATCACATGATCCGAAAGCTGTAATAACAACATACGAGGGTAAACACAATCATGATGTACCAACTGCGAGGCATAATAGTCATGACATGGCAGGACCATCAGCTGCAGGTGGACAGACAAGAATCCGGCAAGAAGAAAGTGATACTATTAGCCTTGACCTTGGAATGGGTCTCAGCCCAACCGCCGAAAATAGACCAAACAGTCTAGGGAGAATGATGCGCAATGAATATGGCGACAGTCAAACACATAACGGCAATTCCAGTTTCAAGTTTGTTCATAGTTCTACACCACCTCCGGTATACTTTGGTGTACTAAATAACAGCGCAAATCCATATGGTTCTAGAGAAAATCCGAGTGATAGTTCATCTTTAAACCGTTCTGCATATCCTTGCCCACAGAACATGGGAAGAATAATGATGGGTCCCTAA
Protein sequence

>Msa0362150

MDAAGDTQFRRQSPAGETEHHSEDPNRTGSSSRPDSVSDGPTTSGARYKLMSPAKLPISRSPVLTIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRLQQTVHGFVSSSTSAAFPVTSACFNSNSVDDGKSSFFEFKPHSRSNMVPADFYNHACEQSTQINGQGNAKSFVSSPLVKSETAVPSDEISLSSSPVQMVSSGASAHVEVVLDESNPSGSKATGLQASQVDGRGSGLSVAADKASDDGYNWRKYGQKLVKGCEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQPSRRFSGGNMMSVQEERSDRASLTSRDDNGFNNYGQMSHAAERDSTPELSPIAANDGSPEGAGFLSNQNNDEVDEDDPFSKRRKMDLDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPTARHNSHDMAGPSAAGGQTRIRQEESDTISLDLGMGLSPTAENRPNSLGRMMRNEYGDSQTHNGNSSFKFVHSSTPPPVYFGVLNNSANPYGSRENPSDSSSLNRSAYPCPQNMGRIMMGP*