Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364350 | XP_039687150.1 | 78.322 | 286 | 58 | 2 | 1 | 283 | 1 | 285 | 4.62e-157 | 449 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364350 | sp|Q8L3W1|VRN1_ARATH | 32.558 | 129 | 79 | 2 | 12 | 132 | 6 | 134 | 6.11e-16 | 80.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364350 | G7IY86 | 78.322 | 286 | 58 | 2 | 1 | 283 | 1 | 285 | 2.21e-157 | 449 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0364350 | TF | B3 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364350 | MtrunA17_Chr3g0103181 | 74.648 | 284 | 66 | 4 | 1 | 283 | 1 | 279 | 1.77e-148 | 417 |
| Msa0364350 | MtrunA17_Chr3g0103171 | 77.863 | 262 | 54 | 2 | 25 | 283 | 5 | 265 | 1.68e-144 | 406 |
| Msa0364350 | MtrunA17_Chr3g0103191 | 72.441 | 254 | 63 | 5 | 1 | 250 | 1 | 251 | 8.23e-125 | 356 |
| Msa0364350 | MtrunA17_Chr3g0103201 | 67.713 | 223 | 65 | 4 | 65 | 283 | 1 | 220 | 5.77e-99 | 289 |
| Msa0364350 | MtrunA17_Chr3g0103151 | 84.810 | 158 | 24 | 0 | 1 | 158 | 1 | 158 | 4.09e-97 | 282 |
| Msa0364350 | MtrunA17_Chr3g0103161 | 68.908 | 119 | 34 | 2 | 164 | 282 | 7 | 122 | 9.70e-50 | 160 |
| Msa0364350 | MtrunA17_Chr1g0163071 | 33.447 | 293 | 152 | 6 | 26 | 283 | 2 | 286 | 2.45e-47 | 160 |
| Msa0364350 | MtrunA17_Chr8g0390841 | 33.228 | 316 | 159 | 8 | 4 | 283 | 31 | 330 | 4.49e-47 | 164 |
| Msa0364350 | MtrunA17_Chr8g0390841 | 45.455 | 66 | 34 | 1 | 218 | 283 | 454 | 517 | 1.97e-11 | 63.9 |
| Msa0364350 | MtrunA17_Chr1g0208771 | 32.215 | 298 | 149 | 8 | 21 | 283 | 10 | 289 | 2.90e-41 | 148 |
| Msa0364350 | MtrunA17_Chr1g0208771 | 37.838 | 111 | 65 | 2 | 175 | 283 | 349 | 457 | 1.63e-13 | 70.1 |
| Msa0364350 | MtrunA17_Chr7g0233561 | 32.667 | 300 | 174 | 10 | 9 | 283 | 15 | 311 | 3.96e-41 | 144 |
| Msa0364350 | MtrunA17_Chr3g0131891 | 29.966 | 297 | 176 | 7 | 9 | 283 | 16 | 302 | 6.23e-34 | 125 |
| Msa0364350 | MtrunA17_Chr7g0233521 | 30.337 | 267 | 171 | 4 | 26 | 283 | 2 | 262 | 1.72e-33 | 123 |
| Msa0364350 | MtrunA17_Chr1g0163251 | 30.496 | 282 | 173 | 7 | 12 | 282 | 9 | 278 | 3.79e-33 | 125 |
| Msa0364350 | MtrunA17_Chr4g0067431 | 31.250 | 304 | 174 | 10 | 10 | 283 | 13 | 311 | 6.45e-33 | 123 |
| Msa0364350 | MtrunA17_Chr1g0163181 | 29.097 | 299 | 164 | 9 | 14 | 282 | 11 | 291 | 1.64e-31 | 121 |
| Msa0364350 | MtrunA17_Chr7g0233541 | 29.617 | 287 | 164 | 9 | 26 | 283 | 2 | 279 | 8.46e-30 | 114 |
| Msa0364350 | MtrunA17_Chr7g0233531 | 30.258 | 271 | 166 | 7 | 26 | 283 | 2 | 262 | 1.58e-28 | 110 |
| Msa0364350 | MtrunA17_Chr1g0163261 | 27.817 | 284 | 183 | 7 | 9 | 280 | 6 | 279 | 2.95e-28 | 110 |
| Msa0364350 | MtrunA17_Chr1g0163131 | 30.195 | 308 | 174 | 10 | 2 | 280 | 8 | 303 | 2.21e-27 | 107 |
| Msa0364350 | MtrunA17_Chr7g0233571 | 49.038 | 104 | 51 | 1 | 9 | 110 | 7 | 110 | 2.41e-26 | 103 |
| Msa0364350 | MtrunA17_Chr1g0163201 | 28.315 | 279 | 166 | 8 | 25 | 282 | 18 | 283 | 1.27e-25 | 104 |
| Msa0364350 | MtrunA17_Chr3g0077451 | 28.352 | 261 | 149 | 5 | 24 | 283 | 10 | 233 | 3.24e-25 | 100 |
| Msa0364350 | MtrunA17_Chr1g0163221 | 28.852 | 305 | 180 | 11 | 1 | 283 | 1 | 290 | 2.15e-24 | 100 |
| Msa0364350 | MtrunA17_Chr5g0429931 | 27.692 | 260 | 159 | 6 | 25 | 283 | 10 | 241 | 5.92e-23 | 94.7 |
| Msa0364350 | MtrunA17_Chr1g0163231 | 26.761 | 284 | 186 | 8 | 9 | 282 | 6 | 277 | 2.36e-22 | 94.0 |
| Msa0364350 | MtrunA17_Chr5g0419201 | 34.228 | 149 | 94 | 2 | 12 | 156 | 16 | 164 | 2.40e-22 | 91.7 |
| Msa0364350 | MtrunA17_Chr4g0033961 | 35.036 | 137 | 79 | 2 | 12 | 138 | 6 | 142 | 4.65e-22 | 95.1 |
| Msa0364350 | MtrunA17_Chr1g0162441 | 36.029 | 136 | 77 | 2 | 12 | 137 | 7 | 142 | 8.72e-22 | 94.4 |
| Msa0364350 | MtrunA17_Chr1g0171611 | 25.000 | 280 | 184 | 9 | 9 | 282 | 6 | 265 | 1.05e-21 | 92.4 |
| Msa0364350 | MtrunA17_Chr1g0154131 | 26.573 | 286 | 194 | 7 | 10 | 280 | 182 | 466 | 1.71e-21 | 93.6 |
| Msa0364350 | MtrunA17_Chr3g0077411 | 26.689 | 296 | 174 | 7 | 1 | 283 | 251 | 516 | 1.23e-20 | 91.3 |
| Msa0364350 | MtrunA17_Chr3g0077411 | 36.364 | 99 | 61 | 1 | 12 | 108 | 25 | 123 | 3.36e-13 | 69.3 |
| Msa0364350 | MtrunA17_Chr1g0163061 | 43.810 | 105 | 56 | 2 | 7 | 108 | 10 | 114 | 5.16e-20 | 87.4 |
| Msa0364350 | MtrunA17_Chr1g0154161 | 24.749 | 299 | 189 | 10 | 6 | 283 | 23 | 306 | 8.92e-20 | 87.4 |
| Msa0364350 | MtrunA17_Chr3g0077421 | 28.384 | 229 | 125 | 5 | 57 | 283 | 4 | 195 | 2.81e-19 | 83.6 |
| Msa0364350 | MtrunA17_Chr3g0077441 | 28.384 | 229 | 125 | 5 | 57 | 283 | 4 | 195 | 2.81e-19 | 83.6 |
| Msa0364350 | MtrunA17_Chr1g0163191 | 37.143 | 105 | 62 | 2 | 12 | 116 | 9 | 109 | 4.76e-19 | 82.0 |
| Msa0364350 | MtrunA17_Chr1g0162411 | 37.500 | 136 | 73 | 4 | 12 | 137 | 7 | 140 | 1.08e-18 | 85.5 |
| Msa0364350 | MtrunA17_Chr6g0467351 | 32.903 | 155 | 86 | 4 | 10 | 161 | 13 | 152 | 2.51e-18 | 81.6 |
| Msa0364350 | MtrunA17_Chr3g0077431 | 27.632 | 228 | 127 | 5 | 57 | 283 | 4 | 194 | 6.89e-17 | 77.4 |
| Msa0364350 | MtrunA17_Chr3g0077461 | 26.838 | 272 | 146 | 8 | 12 | 277 | 237 | 461 | 2.82e-16 | 78.6 |
| Msa0364350 | MtrunA17_Chr3g0077461 | 39.326 | 89 | 52 | 1 | 20 | 108 | 19 | 105 | 3.60e-13 | 69.3 |
| Msa0364350 | MtrunA17_Chr1g0163241 | 38.542 | 96 | 55 | 2 | 15 | 110 | 14 | 105 | 4.01e-16 | 74.3 |
| Msa0364350 | MtrunA17_Chr1g0163081 | 32.857 | 140 | 84 | 4 | 26 | 159 | 6 | 141 | 4.69e-15 | 70.9 |
| Msa0364350 | MtrunA17_Chr1g0163121 | 38.793 | 116 | 61 | 4 | 24 | 133 | 9 | 120 | 4.98e-15 | 70.9 |
| Msa0364350 | MtrunA17_Chr1g0163161 | 38.235 | 102 | 54 | 3 | 38 | 133 | 1 | 99 | 1.33e-14 | 69.3 |
| Msa0364350 | MtrunA17_Chr1g0163101 | 31.677 | 161 | 95 | 7 | 10 | 159 | 15 | 171 | 1.22e-13 | 67.8 |
| Msa0364350 | MtrunA17_Chr3g0077381 | 33.043 | 115 | 76 | 1 | 13 | 126 | 23 | 137 | 1.73e-13 | 70.1 |
| Msa0364350 | MtrunA17_Chr3g0077381 | 33.333 | 99 | 65 | 1 | 22 | 119 | 259 | 357 | 6.52e-11 | 62.4 |
| Msa0364350 | MtrunA17_Chr3g0077361 | 24.074 | 270 | 151 | 8 | 12 | 277 | 40 | 259 | 2.19e-12 | 67.0 |
| Msa0364350 | MtrunA17_Chr4g0009491 | 27.083 | 192 | 112 | 5 | 22 | 210 | 237 | 403 | 2.77e-12 | 66.6 |
| Msa0364350 | MtrunA17_Chr6g0476181 | 33.333 | 114 | 73 | 2 | 26 | 139 | 2 | 112 | 6.82e-12 | 62.4 |
| Msa0364350 | MtrunA17_Chr1g0162161 | 29.921 | 127 | 81 | 3 | 26 | 147 | 4 | 127 | 7.10e-12 | 62.4 |
| Msa0364350 | MtrunA17_Chr1g0163141 | 37.234 | 94 | 56 | 2 | 24 | 117 | 9 | 99 | 1.49e-11 | 62.0 |
| Msa0364350 | MtrunA17_Chr1g0162421 | 42.857 | 56 | 32 | 0 | 24 | 79 | 7 | 62 | 6.01e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0364350 | AT3G18990.1 | 32.558 | 129 | 79 | 2 | 12 | 132 | 6 | 134 | 6.21e-17 | 80.1 |
| Msa0364350 | AT3G18990.1 | 29.167 | 120 | 80 | 2 | 165 | 283 | 220 | 335 | 3.22e-12 | 66.2 |
| Msa0364350 | AT3G18990.2 | 32.558 | 129 | 79 | 2 | 12 | 132 | 6 | 134 | 9.16e-17 | 79.7 |
| Msa0364350 | AT3G18990.2 | 29.167 | 120 | 80 | 2 | 165 | 283 | 220 | 335 | 3.33e-12 | 66.6 |
| Msa0364350 | AT1G49475.1 | 35.821 | 134 | 74 | 5 | 11 | 133 | 33 | 165 | 2.51e-16 | 75.9 |
| Msa0364350 | AT4G33280.1 | 25.249 | 301 | 191 | 10 | 10 | 283 | 23 | 316 | 6.58e-16 | 77.0 |
| Msa0364350 | AT4G01580.1 | 33.333 | 123 | 74 | 2 | 11 | 131 | 29 | 145 | 1.27e-15 | 73.9 |
| Msa0364350 | AT3G18960.2 | 37.000 | 100 | 61 | 1 | 11 | 108 | 29 | 128 | 4.14e-15 | 72.4 |
| Msa0364350 | AT3G18960.1 | 37.000 | 100 | 61 | 1 | 11 | 108 | 29 | 128 | 4.71e-15 | 72.8 |
| Msa0364350 | AT1G49480.3 | 28.333 | 120 | 81 | 2 | 165 | 283 | 105 | 220 | 1.07e-12 | 66.6 |
| Msa0364350 | AT1G49480.1 | 28.333 | 120 | 81 | 2 | 165 | 283 | 105 | 220 | 1.07e-12 | 66.6 |
| Msa0364350 | AT1G49480.2 | 28.333 | 120 | 81 | 2 | 165 | 283 | 105 | 220 | 1.07e-12 | 66.6 |
| Msa0364350 | AT3G18960.3 | 39.286 | 84 | 51 | 0 | 25 | 108 | 8 | 91 | 1.77e-12 | 64.7 |
Find 61 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTTCCTTGTAAACTTATT+TGG | 0.168004 | 3_1:-57171797 | None:intergenic |
| GCACTAAATGGAAAGTTTAT+TGG | 0.220986 | 3_1:+57171864 | Msa0364350:CDS |
| CTCTCTTGGACATCGCTCTT+TGG | 0.285220 | 3_1:+57171946 | Msa0364350:CDS |
| TCTCTAGTATTCTTCTGATT+TGG | 0.291580 | 3_1:-57172124 | None:intergenic |
| TGTACCAACTATACATTTAA+AGG | 0.291905 | 3_1:+57172707 | Msa0364350:CDS |
| AGCCTCCTGATGGCACTAAA+TGG | 0.291942 | 3_1:+57171852 | Msa0364350:CDS |
| CAAGCCTTTGAAGATTAGTT+TGG | 0.307867 | 3_1:-57171506 | None:intergenic |
| TTGGTCGTGTTTGAATATAA+AGG | 0.362801 | 3_1:+57171965 | Msa0364350:CDS |
| TTTACTGAAAATTACTCTCT+TGG | 0.363298 | 3_1:+57171932 | Msa0364350:CDS |
| TGGTGAGATTTGGTTTGAAA+AGG | 0.373936 | 3_1:+57171898 | Msa0364350:CDS |
| TTAAAGTTCATGTTTACTAA+AGG | 0.410137 | 3_1:+57172928 | Msa0364350:CDS |
| AGACTACTAAAAGCTTGAAT+TGG | 0.414340 | 3_1:+57172472 | Msa0364350:CDS |
| GTACCAACTATACATTTAAA+GGG | 0.419412 | 3_1:+57172708 | Msa0364350:CDS |
| ATACAGCCTAATCATCTTGT+AGG | 0.424914 | 3_1:+57172564 | Msa0364350:CDS |
| TGTGGTCGAGGATAAAATAT+TGG | 0.424931 | 3_1:-57172154 | None:intergenic |
| CTGGTTGGTCCTTGTTTGCA+AGG | 0.431391 | 3_1:+57172841 | Msa0364350:CDS |
| ACTTTCCATTTAGTGCCATC+AGG | 0.440549 | 3_1:-57171857 | None:intergenic |
| TAGTACAGGTCGTCTCCTTT+CGG | 0.443794 | 3_1:+57172818 | Msa0364350:CDS |
| GTACTAGCACGCTCGTAAGC+AGG | 0.456799 | 3_1:-57172801 | None:intergenic |
| GTCGTCTCCTTTCGGCTGGT+TGG | 0.458127 | 3_1:+57172826 | Msa0364350:CDS |
| GCCTTTGAAGATTAGTTTGG+AGG | 0.463355 | 3_1:-57171503 | None:intergenic |
| AGTCTATTTCTACTGCATCT+TGG | 0.466134 | 3_1:-57172018 | None:intergenic |
| AGATTTGGTTTGAAAAGGGT+TGG | 0.470784 | 3_1:+57171903 | Msa0364350:CDS |
| AAGTTTGATGTACACATACT+TGG | 0.471543 | 3_1:+57171995 | Msa0364350:CDS |
| AAGAATCTGGTGCTTCAGAT+TGG | 0.472900 | 3_1:+57172750 | Msa0364350:CDS |
| ACAGGTCGTCTCCTTTCGGC+TGG | 0.477583 | 3_1:+57172822 | Msa0364350:CDS |
| TGAGAACAAGGAGAAGAATC+TGG | 0.478878 | 3_1:+57172737 | Msa0364350:CDS |
| TTCTCCTAGCCATGGGATGA+TGG | 0.481832 | 3_1:-57171446 | None:intergenic |
| TCCACTTTCCCTTGCAAACA+AGG | 0.485182 | 3_1:-57172850 | None:intergenic |
| CGAGTTCCTACAAGATGATT+AGG | 0.490910 | 3_1:-57172570 | None:intergenic |
| TCCTTGTTTGCAAGGGAAAG+TGG | 0.492433 | 3_1:+57172849 | Msa0364350:CDS |
| GGTGAGATTTGGTTTGAAAA+GGG | 0.495938 | 3_1:+57171899 | Msa0364350:CDS |
| GTCAAATAAAGATAGAGCTC+AGG | 0.504850 | 3_1:+57172494 | Msa0364350:CDS |
| ATACCGCTAACTTTCTTATG+TGG | 0.517982 | 3_1:-57172172 | None:intergenic |
| ATCAGAAGAATACTAGAGAA+AGG | 0.518497 | 3_1:+57172128 | Msa0364350:CDS |
| TCCTCCAAACTAATCTTCAA+AGG | 0.526079 | 3_1:+57171502 | Msa0364350:CDS |
| GTTAGAATTTCTCCTAGCCA+TGG | 0.526254 | 3_1:-57171454 | None:intergenic |
| CTAATCATCTTGTAGGAACT+CGG | 0.533577 | 3_1:+57172571 | Msa0364350:CDS |
| CTAACTTTCTTATGTGGTCG+AGG | 0.541461 | 3_1:-57172166 | None:intergenic |
| CGACCACATAAGAAAGTTAG+CGG | 0.545123 | 3_1:+57172169 | Msa0364350:CDS |
| TGGTTGGTCCTTGTTTGCAA+GGG | 0.547267 | 3_1:+57172842 | Msa0364350:CDS |
| GCTTACGAGCGTGCTAGTAC+AGG | 0.550851 | 3_1:+57172804 | Msa0364350:CDS |
| AAGTATGTGTACATCAAACT+TGG | 0.555627 | 3_1:-57171993 | None:intergenic |
| TTCAGATTGGAGAAAGATCA+TGG | 0.565384 | 3_1:+57172763 | Msa0364350:CDS |
| TCATCTTGTAGGAACTCGGC+TGG | 0.571420 | 3_1:+57172575 | Msa0364350:CDS |
| TTAGAATTTCTCCTAGCCAT+GGG | 0.572468 | 3_1:-57171453 | None:intergenic |
| TCAGGAGGCTTGATCAACAC+TGG | 0.572588 | 3_1:-57171839 | None:intergenic |
| AAATACCAAATAAGTTTACA+AGG | 0.573284 | 3_1:+57171792 | Msa0364350:CDS |
| TACTAGCACGCTCGTAAGCA+GGG | 0.574154 | 3_1:-57172800 | None:intergenic |
| TACCAACTATACATTTAAAG+GGG | 0.578458 | 3_1:+57172709 | Msa0364350:CDS |
| TTTACAAGGAAACATGGAGT+TGG | 0.585473 | 3_1:+57171806 | Msa0364350:CDS |
| CACTCCATCATCCCATGGCT+AGG | 0.595544 | 3_1:+57171442 | Msa0364350:exon |
| TGGGATGATGGAGTGTGAAG+TGG | 0.601368 | 3_1:-57171434 | None:intergenic |
| AATGATGAAAATGACTATGT+TGG | 0.605994 | 3_1:+57172061 | Msa0364350:CDS |
| GTGTTGATCAAGCCTCCTGA+TGG | 0.612633 | 3_1:+57171842 | Msa0364350:CDS |
| ACAAGGACCAACCAGCCGAA+AGG | 0.612648 | 3_1:-57172833 | None:intergenic |
| TTCCATTTAGTGCCATCAGG+AGG | 0.615384 | 3_1:-57171854 | None:intergenic |
| CTTCACACTCCATCATCCCA+TGG | 0.623579 | 3_1:+57171437 | Msa0364350:exon |
| AATAAGTTTACAAGGAAACA+TGG | 0.624449 | 3_1:+57171800 | Msa0364350:CDS |
| TATCTTTGAACTGATAAACA+AGG | 0.641859 | 3_1:+57172893 | Msa0364350:CDS |
| ACCAACTATACATTTAAAGG+GGG | 0.688010 | 3_1:+57172710 | Msa0364350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTGTTGTTTTATTATTTTT+GGG | + | chr3_1:57172214-57172233 | Msa0364350:intron | 10.0% |
| !!! | TTTGTTGTTTTATTATTTTT+GGG | + | chr3_1:57172214-57172233 | Msa0364350:intron | 10.0% |
| !!! | AAAAATGTTTTATTTCTAGA+AGG | + | chr3_1:57171710-57171729 | Msa0364350:intron | 15.0% |
| !!! | GTTTGTTGTTTTATTATTTT+TGG | + | chr3_1:57172213-57172232 | Msa0364350:intron | 15.0% |
| !!! | ACAAATAATTAAGCTTTAAT+AGG | - | chr3_1:57172416-57172435 | None:intergenic | 15.0% |
| !!! | AAAAATGTTTTATTTCTAGA+AGG | + | chr3_1:57171710-57171729 | Msa0364350:intron | 15.0% |
| !!! | GTTTGTTGTTTTATTATTTT+TGG | + | chr3_1:57172213-57172232 | Msa0364350:intron | 15.0% |
| !!! | ACAAATAATTAAGCTTTAAT+AGG | - | chr3_1:57172416-57172435 | None:intergenic | 15.0% |
| !! | AAATACCAAATAAGTTTACA+AGG | + | chr3_1:57171792-57171811 | Msa0364350:CDS | 20.0% |
| !! | GTTTATTGGAAAAAAATCAA+TGG | + | chr3_1:57171878-57171897 | Msa0364350:CDS | 20.0% |
| !!! | ATACTTTCCATTTAAAATGA+AGG | + | chr3_1:57172255-57172274 | Msa0364350:intron | 20.0% |
| !!! | TACTTTCCATTTAAAATGAA+GGG | + | chr3_1:57172256-57172275 | Msa0364350:intron | 20.0% |
| !! | CTATAATCAATTACATTCAA+AGG | - | chr3_1:57172303-57172322 | None:intergenic | 20.0% |
| !!! | AATAATTAAGCTTTAATAGG+AGG | - | chr3_1:57172413-57172432 | None:intergenic | 20.0% |
| !! | TTACTACATTTATTCATTCA+TGG | + | chr3_1:57172616-57172635 | Msa0364350:intron | 20.0% |
| !! | AAATACCAAATAAGTTTACA+AGG | + | chr3_1:57171792-57171811 | Msa0364350:CDS | 20.0% |
| !! | GTTTATTGGAAAAAAATCAA+TGG | + | chr3_1:57171878-57171897 | Msa0364350:CDS | 20.0% |
| !!! | ATACTTTCCATTTAAAATGA+AGG | + | chr3_1:57172255-57172274 | Msa0364350:intron | 20.0% |
| !!! | TACTTTCCATTTAAAATGAA+GGG | + | chr3_1:57172256-57172275 | Msa0364350:intron | 20.0% |
| !! | CTATAATCAATTACATTCAA+AGG | - | chr3_1:57172303-57172322 | None:intergenic | 20.0% |
| !!! | AATAATTAAGCTTTAATAGG+AGG | - | chr3_1:57172413-57172432 | None:intergenic | 20.0% |
| !! | TTACTACATTTATTCATTCA+TGG | + | chr3_1:57172616-57172635 | Msa0364350:intron | 20.0% |
| ! | ATAATCTTGAAAAAACGGAT+GGG | - | chr3_1:57171483-57171502 | None:intergenic | 25.0% |
| ! | TTTGGTCATTATCAAACAAA+AGG | - | chr3_1:57171751-57171770 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGATAATGACCAA+AGG | + | chr3_1:57171750-57171769 | Msa0364350:intron | 25.0% |
| !!! | TTTGTTTGATAATGACCAAA+GGG | + | chr3_1:57171751-57171770 | Msa0364350:intron | 25.0% |
| ! | GTAAAAATTAAAAACCCCTT+TGG | - | chr3_1:57171769-57171788 | None:intergenic | 25.0% |
| ! | TGTTTCCTTGTAAACTTATT+TGG | - | chr3_1:57171800-57171819 | None:intergenic | 25.0% |
| ! | AATAAGTTTACAAGGAAACA+TGG | + | chr3_1:57171800-57171819 | Msa0364350:CDS | 25.0% |
| ! | AAAAAATCAATGGTGAGATT+TGG | + | chr3_1:57171888-57171907 | Msa0364350:CDS | 25.0% |
| ! | TTTACTGAAAATTACTCTCT+TGG | + | chr3_1:57171932-57171951 | Msa0364350:CDS | 25.0% |
| ! | AATGATGAAAATGACTATGT+TGG | + | chr3_1:57172061-57172080 | Msa0364350:CDS | 25.0% |
| ! | TATATTCTACTCATATATGC+AGG | + | chr3_1:57172438-57172457 | Msa0364350:intron | 25.0% |
| ! | TGTATGAGAATTGTGAAAAA+AGG | - | chr3_1:57172549-57172568 | None:intergenic | 25.0% |
| ! | TGTACCAACTATACATTTAA+AGG | + | chr3_1:57172707-57172726 | Msa0364350:CDS | 25.0% |
| ! | GTACCAACTATACATTTAAA+GGG | + | chr3_1:57172708-57172727 | Msa0364350:CDS | 25.0% |
| ! | TACCAACTATACATTTAAAG+GGG | + | chr3_1:57172709-57172728 | Msa0364350:CDS | 25.0% |
| ! | TATCTTTGAACTGATAAACA+AGG | + | chr3_1:57172893-57172912 | Msa0364350:CDS | 25.0% |
| ! | ATAATCTTGAAAAAACGGAT+GGG | - | chr3_1:57171483-57171502 | None:intergenic | 25.0% |
| ! | TTTGGTCATTATCAAACAAA+AGG | - | chr3_1:57171751-57171770 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGATAATGACCAA+AGG | + | chr3_1:57171750-57171769 | Msa0364350:intron | 25.0% |
| !!! | TTTGTTTGATAATGACCAAA+GGG | + | chr3_1:57171751-57171770 | Msa0364350:intron | 25.0% |
| ! | GTAAAAATTAAAAACCCCTT+TGG | - | chr3_1:57171769-57171788 | None:intergenic | 25.0% |
| ! | TGTTTCCTTGTAAACTTATT+TGG | - | chr3_1:57171800-57171819 | None:intergenic | 25.0% |
| ! | AATAAGTTTACAAGGAAACA+TGG | + | chr3_1:57171800-57171819 | Msa0364350:CDS | 25.0% |
| ! | AAAAAATCAATGGTGAGATT+TGG | + | chr3_1:57171888-57171907 | Msa0364350:CDS | 25.0% |
| ! | TTTACTGAAAATTACTCTCT+TGG | + | chr3_1:57171932-57171951 | Msa0364350:CDS | 25.0% |
| ! | AATGATGAAAATGACTATGT+TGG | + | chr3_1:57172061-57172080 | Msa0364350:CDS | 25.0% |
| ! | TATATTCTACTCATATATGC+AGG | + | chr3_1:57172438-57172457 | Msa0364350:intron | 25.0% |
| ! | TGTATGAGAATTGTGAAAAA+AGG | - | chr3_1:57172549-57172568 | None:intergenic | 25.0% |
| ! | TGTACCAACTATACATTTAA+AGG | + | chr3_1:57172707-57172726 | Msa0364350:CDS | 25.0% |
| ! | GTACCAACTATACATTTAAA+GGG | + | chr3_1:57172708-57172727 | Msa0364350:CDS | 25.0% |
| ! | TACCAACTATACATTTAAAG+GGG | + | chr3_1:57172709-57172728 | Msa0364350:CDS | 25.0% |
| ! | TATCTTTGAACTGATAAACA+AGG | + | chr3_1:57172893-57172912 | Msa0364350:CDS | 25.0% |
| GATAATCTTGAAAAAACGGA+TGG | - | chr3_1:57171484-57171503 | None:intergenic | 30.0% | |
| GGAGGATAATCTTGAAAAAA+CGG | - | chr3_1:57171488-57171507 | None:intergenic | 30.0% | |
| TAGCACTAGAAATCTCATTA+CGG | + | chr3_1:57171634-57171653 | Msa0364350:intron | 30.0% | |
| !! | TTGTTTGATAATGACCAAAG+GGG | + | chr3_1:57171752-57171771 | Msa0364350:intron | 30.0% |
| GCACTAAATGGAAAGTTTAT+TGG | + | chr3_1:57171864-57171883 | Msa0364350:CDS | 30.0% | |
| TTGGTCGTGTTTGAATATAA+AGG | + | chr3_1:57171965-57171984 | Msa0364350:CDS | 30.0% | |
| AAGTATGTGTACATCAAACT+TGG | - | chr3_1:57171996-57172015 | None:intergenic | 30.0% | |
| AAGTTTGATGTACACATACT+TGG | + | chr3_1:57171995-57172014 | Msa0364350:CDS | 30.0% | |
| ! | CACTTGAGATTTTAGATGAA+TGG | + | chr3_1:57172101-57172120 | Msa0364350:CDS | 30.0% |
| TCTCTAGTATTCTTCTGATT+TGG | - | chr3_1:57172127-57172146 | None:intergenic | 30.0% | |
| ATCAGAAGAATACTAGAGAA+AGG | + | chr3_1:57172128-57172147 | Msa0364350:CDS | 30.0% | |
| ! | TGTTGACCCTTCATTTTAAA+TGG | - | chr3_1:57172265-57172284 | None:intergenic | 30.0% |
| GTTGGAAATTTCAACATTCA+TGG | - | chr3_1:57172385-57172404 | None:intergenic | 30.0% | |
| AGACTACTAAAAGCTTGAAT+TGG | + | chr3_1:57172472-57172491 | Msa0364350:CDS | 30.0% | |
| ACCAACTATACATTTAAAGG+GGG | + | chr3_1:57172710-57172729 | Msa0364350:CDS | 30.0% | |
| GATAATCTTGAAAAAACGGA+TGG | - | chr3_1:57171484-57171503 | None:intergenic | 30.0% | |
| GGAGGATAATCTTGAAAAAA+CGG | - | chr3_1:57171488-57171507 | None:intergenic | 30.0% | |
| TAGCACTAGAAATCTCATTA+CGG | + | chr3_1:57171634-57171653 | Msa0364350:intron | 30.0% | |
| !! | TTGTTTGATAATGACCAAAG+GGG | + | chr3_1:57171752-57171771 | Msa0364350:intron | 30.0% |
| GCACTAAATGGAAAGTTTAT+TGG | + | chr3_1:57171864-57171883 | Msa0364350:CDS | 30.0% | |
| TTGGTCGTGTTTGAATATAA+AGG | + | chr3_1:57171965-57171984 | Msa0364350:CDS | 30.0% | |
| AAGTATGTGTACATCAAACT+TGG | - | chr3_1:57171996-57172015 | None:intergenic | 30.0% | |
| AAGTTTGATGTACACATACT+TGG | + | chr3_1:57171995-57172014 | Msa0364350:CDS | 30.0% | |
| ! | CACTTGAGATTTTAGATGAA+TGG | + | chr3_1:57172101-57172120 | Msa0364350:CDS | 30.0% |
| TCTCTAGTATTCTTCTGATT+TGG | - | chr3_1:57172127-57172146 | None:intergenic | 30.0% | |
| ATCAGAAGAATACTAGAGAA+AGG | + | chr3_1:57172128-57172147 | Msa0364350:CDS | 30.0% | |
| ! | TGTTGACCCTTCATTTTAAA+TGG | - | chr3_1:57172265-57172284 | None:intergenic | 30.0% |
| GTTGGAAATTTCAACATTCA+TGG | - | chr3_1:57172385-57172404 | None:intergenic | 30.0% | |
| AGACTACTAAAAGCTTGAAT+TGG | + | chr3_1:57172472-57172491 | Msa0364350:CDS | 30.0% | |
| ACCAACTATACATTTAAAGG+GGG | + | chr3_1:57172710-57172729 | Msa0364350:CDS | 30.0% | |
| TTAGAATTTCTCCTAGCCAT+GGG | - | chr3_1:57171456-57171475 | None:intergenic | 35.0% | |
| TCCTCCAAACTAATCTTCAA+AGG | + | chr3_1:57171502-57171521 | Msa0364350:CDS | 35.0% | |
| ! | CAAGCCTTTGAAGATTAGTT+TGG | - | chr3_1:57171509-57171528 | None:intergenic | 35.0% |
| TTTACAAGGAAACATGGAGT+TGG | + | chr3_1:57171806-57171825 | Msa0364350:CDS | 35.0% | |
| !! | TGGTGAGATTTGGTTTGAAA+AGG | + | chr3_1:57171898-57171917 | Msa0364350:CDS | 35.0% |
| !! | GGTGAGATTTGGTTTGAAAA+GGG | + | chr3_1:57171899-57171918 | Msa0364350:CDS | 35.0% |
| !! | AGATTTGGTTTGAAAAGGGT+TGG | + | chr3_1:57171903-57171922 | Msa0364350:CDS | 35.0% |
| !! | AGTCTATTTCTACTGCATCT+TGG | - | chr3_1:57172021-57172040 | None:intergenic | 35.0% |
| TGTGGTCGAGGATAAAATAT+TGG | - | chr3_1:57172157-57172176 | None:intergenic | 35.0% | |
| ATACCGCTAACTTTCTTATG+TGG | - | chr3_1:57172175-57172194 | None:intergenic | 35.0% | |
| AGTCAAAACTGCTTGTAGTT+AGG | + | chr3_1:57172331-57172350 | Msa0364350:intron | 35.0% | |
| ATTTCAACATTCATGGTGCT+TGG | - | chr3_1:57172378-57172397 | None:intergenic | 35.0% | |
| GTCAAATAAAGATAGAGCTC+AGG | + | chr3_1:57172494-57172513 | Msa0364350:CDS | 35.0% | |
| ATACAGCCTAATCATCTTGT+AGG | + | chr3_1:57172564-57172583 | Msa0364350:CDS | 35.0% | |
| CTAATCATCTTGTAGGAACT+CGG | + | chr3_1:57172571-57172590 | Msa0364350:CDS | 35.0% | |
| ACCCCCTTTAAATGTATAGT+TGG | - | chr3_1:57172714-57172733 | None:intergenic | 35.0% | |
| TTCAGATTGGAGAAAGATCA+TGG | + | chr3_1:57172763-57172782 | Msa0364350:CDS | 35.0% | |
| TTAGAATTTCTCCTAGCCAT+GGG | - | chr3_1:57171456-57171475 | None:intergenic | 35.0% | |
| TCCTCCAAACTAATCTTCAA+AGG | + | chr3_1:57171502-57171521 | Msa0364350:CDS | 35.0% | |
| ! | CAAGCCTTTGAAGATTAGTT+TGG | - | chr3_1:57171509-57171528 | None:intergenic | 35.0% |
| TTTACAAGGAAACATGGAGT+TGG | + | chr3_1:57171806-57171825 | Msa0364350:CDS | 35.0% | |
| !! | TGGTGAGATTTGGTTTGAAA+AGG | + | chr3_1:57171898-57171917 | Msa0364350:CDS | 35.0% |
| !! | GGTGAGATTTGGTTTGAAAA+GGG | + | chr3_1:57171899-57171918 | Msa0364350:CDS | 35.0% |
| !! | AGATTTGGTTTGAAAAGGGT+TGG | + | chr3_1:57171903-57171922 | Msa0364350:CDS | 35.0% |
| !! | AGTCTATTTCTACTGCATCT+TGG | - | chr3_1:57172021-57172040 | None:intergenic | 35.0% |
| TGTGGTCGAGGATAAAATAT+TGG | - | chr3_1:57172157-57172176 | None:intergenic | 35.0% | |
| ATACCGCTAACTTTCTTATG+TGG | - | chr3_1:57172175-57172194 | None:intergenic | 35.0% | |
| AGTCAAAACTGCTTGTAGTT+AGG | + | chr3_1:57172331-57172350 | Msa0364350:intron | 35.0% | |
| ATTTCAACATTCATGGTGCT+TGG | - | chr3_1:57172378-57172397 | None:intergenic | 35.0% | |
| GTCAAATAAAGATAGAGCTC+AGG | + | chr3_1:57172494-57172513 | Msa0364350:CDS | 35.0% | |
| ATACAGCCTAATCATCTTGT+AGG | + | chr3_1:57172564-57172583 | Msa0364350:CDS | 35.0% | |
| CTAATCATCTTGTAGGAACT+CGG | + | chr3_1:57172571-57172590 | Msa0364350:CDS | 35.0% | |
| ACCCCCTTTAAATGTATAGT+TGG | - | chr3_1:57172714-57172733 | None:intergenic | 35.0% | |
| TTCAGATTGGAGAAAGATCA+TGG | + | chr3_1:57172763-57172782 | Msa0364350:CDS | 35.0% | |
| GTTAGAATTTCTCCTAGCCA+TGG | - | chr3_1:57171457-57171476 | None:intergenic | 40.0% | |
| !! | GCCTTTGAAGATTAGTTTGG+AGG | - | chr3_1:57171506-57171525 | None:intergenic | 40.0% |
| ACTTTCCATTTAGTGCCATC+AGG | - | chr3_1:57171860-57171879 | None:intergenic | 40.0% | |
| CTAACTTTCTTATGTGGTCG+AGG | - | chr3_1:57172169-57172188 | None:intergenic | 40.0% | |
| CGACCACATAAGAAAGTTAG+CGG | + | chr3_1:57172169-57172188 | Msa0364350:CDS | 40.0% | |
| ! | CTTTAATAGGAGGAGCATGT+TGG | - | chr3_1:57172403-57172422 | None:intergenic | 40.0% |
| TCTACTCATATATGCAGGTG+AGG | + | chr3_1:57172443-57172462 | Msa0364350:intron | 40.0% | |
| CGAGTTCCTACAAGATGATT+AGG | - | chr3_1:57172573-57172592 | None:intergenic | 40.0% | |
| AAAGGGGGTTATTGAGAACA+AGG | + | chr3_1:57172725-57172744 | Msa0364350:CDS | 40.0% | |
| TGAGAACAAGGAGAAGAATC+TGG | + | chr3_1:57172737-57172756 | Msa0364350:CDS | 40.0% | |
| AAGAATCTGGTGCTTCAGAT+TGG | + | chr3_1:57172750-57172769 | Msa0364350:CDS | 40.0% | |
| GTTAGAATTTCTCCTAGCCA+TGG | - | chr3_1:57171457-57171476 | None:intergenic | 40.0% | |
| !! | GCCTTTGAAGATTAGTTTGG+AGG | - | chr3_1:57171506-57171525 | None:intergenic | 40.0% |
| ACTTTCCATTTAGTGCCATC+AGG | - | chr3_1:57171860-57171879 | None:intergenic | 40.0% | |
| CTAACTTTCTTATGTGGTCG+AGG | - | chr3_1:57172169-57172188 | None:intergenic | 40.0% | |
| CGACCACATAAGAAAGTTAG+CGG | + | chr3_1:57172169-57172188 | Msa0364350:CDS | 40.0% | |
| ! | CTTTAATAGGAGGAGCATGT+TGG | - | chr3_1:57172403-57172422 | None:intergenic | 40.0% |
| TCTACTCATATATGCAGGTG+AGG | + | chr3_1:57172443-57172462 | Msa0364350:intron | 40.0% | |
| CGAGTTCCTACAAGATGATT+AGG | - | chr3_1:57172573-57172592 | None:intergenic | 40.0% | |
| AAAGGGGGTTATTGAGAACA+AGG | + | chr3_1:57172725-57172744 | Msa0364350:CDS | 40.0% | |
| TGAGAACAAGGAGAAGAATC+TGG | + | chr3_1:57172737-57172756 | Msa0364350:CDS | 40.0% | |
| AAGAATCTGGTGCTTCAGAT+TGG | + | chr3_1:57172750-57172769 | Msa0364350:CDS | 40.0% | |
| TTCCATTTAGTGCCATCAGG+AGG | - | chr3_1:57171857-57171876 | None:intergenic | 45.0% | |
| !! | GTGCTTGGTGTTTCTAGGTT+TGG | - | chr3_1:57172363-57172382 | None:intergenic | 45.0% |
| !! | TCATGGTGCTTGGTGTTTCT+AGG | - | chr3_1:57172368-57172387 | None:intergenic | 45.0% |
| ! | TATAGTTGGTACACGCTGCA+TGG | - | chr3_1:57172700-57172719 | None:intergenic | 45.0% |
| TAGTACAGGTCGTCTCCTTT+CGG | + | chr3_1:57172818-57172837 | Msa0364350:CDS | 45.0% | |
| ! | TGGTTGGTCCTTGTTTGCAA+GGG | + | chr3_1:57172842-57172861 | Msa0364350:CDS | 45.0% |
| ! | TCCTTGTTTGCAAGGGAAAG+TGG | + | chr3_1:57172849-57172868 | Msa0364350:CDS | 45.0% |
| TCCACTTTCCCTTGCAAACA+AGG | - | chr3_1:57172853-57172872 | None:intergenic | 45.0% | |
| TTCCATTTAGTGCCATCAGG+AGG | - | chr3_1:57171857-57171876 | None:intergenic | 45.0% | |
| !! | GTGCTTGGTGTTTCTAGGTT+TGG | - | chr3_1:57172363-57172382 | None:intergenic | 45.0% |
| !! | TCATGGTGCTTGGTGTTTCT+AGG | - | chr3_1:57172368-57172387 | None:intergenic | 45.0% |
| ! | TATAGTTGGTACACGCTGCA+TGG | - | chr3_1:57172700-57172719 | None:intergenic | 45.0% |
| TAGTACAGGTCGTCTCCTTT+CGG | + | chr3_1:57172818-57172837 | Msa0364350:CDS | 45.0% | |
| ! | TGGTTGGTCCTTGTTTGCAA+GGG | + | chr3_1:57172842-57172861 | Msa0364350:CDS | 45.0% |
| ! | TCCTTGTTTGCAAGGGAAAG+TGG | + | chr3_1:57172849-57172868 | Msa0364350:CDS | 45.0% |
| TCCACTTTCCCTTGCAAACA+AGG | - | chr3_1:57172853-57172872 | None:intergenic | 45.0% | |
| !! | TGGGATGATGGAGTGTGAAG+TGG | - | chr3_1:57171437-57171456 | None:intergenic | 50.0% |
| CTTCACACTCCATCATCCCA+TGG | + | chr3_1:57171437-57171456 | Msa0364350:exon | 50.0% | |
| TTCTCCTAGCCATGGGATGA+TGG | - | chr3_1:57171449-57171468 | None:intergenic | 50.0% | |
| TCAGGAGGCTTGATCAACAC+TGG | - | chr3_1:57171842-57171861 | None:intergenic | 50.0% | |
| ! | GTGTTGATCAAGCCTCCTGA+TGG | + | chr3_1:57171842-57171861 | Msa0364350:CDS | 50.0% |
| AGCCTCCTGATGGCACTAAA+TGG | + | chr3_1:57171852-57171871 | Msa0364350:CDS | 50.0% | |
| CTCTCTTGGACATCGCTCTT+TGG | + | chr3_1:57171946-57171965 | Msa0364350:CDS | 50.0% | |
| TCATCTTGTAGGAACTCGGC+TGG | + | chr3_1:57172575-57172594 | Msa0364350:CDS | 50.0% | |
| TTGTAGGAACTCGGCTGGTA+GGG | + | chr3_1:57172580-57172599 | Msa0364350:intron | 50.0% | |
| TACTAGCACGCTCGTAAGCA+GGG | - | chr3_1:57172803-57172822 | None:intergenic | 50.0% | |
| ! | CTGGTTGGTCCTTGTTTGCA+AGG | + | chr3_1:57172841-57172860 | Msa0364350:CDS | 50.0% |
| !! | TGGGATGATGGAGTGTGAAG+TGG | - | chr3_1:57171437-57171456 | None:intergenic | 50.0% |
| CTTCACACTCCATCATCCCA+TGG | + | chr3_1:57171437-57171456 | Msa0364350:exon | 50.0% | |
| TTCTCCTAGCCATGGGATGA+TGG | - | chr3_1:57171449-57171468 | None:intergenic | 50.0% | |
| TCAGGAGGCTTGATCAACAC+TGG | - | chr3_1:57171842-57171861 | None:intergenic | 50.0% | |
| ! | GTGTTGATCAAGCCTCCTGA+TGG | + | chr3_1:57171842-57171861 | Msa0364350:CDS | 50.0% |
| AGCCTCCTGATGGCACTAAA+TGG | + | chr3_1:57171852-57171871 | Msa0364350:CDS | 50.0% | |
| CTCTCTTGGACATCGCTCTT+TGG | + | chr3_1:57171946-57171965 | Msa0364350:CDS | 50.0% | |
| TCATCTTGTAGGAACTCGGC+TGG | + | chr3_1:57172575-57172594 | Msa0364350:CDS | 50.0% | |
| TTGTAGGAACTCGGCTGGTA+GGG | + | chr3_1:57172580-57172599 | Msa0364350:intron | 50.0% | |
| TACTAGCACGCTCGTAAGCA+GGG | - | chr3_1:57172803-57172822 | None:intergenic | 50.0% | |
| ! | CTGGTTGGTCCTTGTTTGCA+AGG | + | chr3_1:57172841-57172860 | Msa0364350:CDS | 50.0% |
| CACTCCATCATCCCATGGCT+AGG | + | chr3_1:57171442-57171461 | Msa0364350:exon | 55.0% | |
| CTTGTAGGAACTCGGCTGGT+AGG | + | chr3_1:57172579-57172598 | Msa0364350:intron | 55.0% | |
| GTACTAGCACGCTCGTAAGC+AGG | - | chr3_1:57172804-57172823 | None:intergenic | 55.0% | |
| GCTTACGAGCGTGCTAGTAC+AGG | + | chr3_1:57172804-57172823 | Msa0364350:CDS | 55.0% | |
| ACAAGGACCAACCAGCCGAA+AGG | - | chr3_1:57172836-57172855 | None:intergenic | 55.0% | |
| CACTCCATCATCCCATGGCT+AGG | + | chr3_1:57171442-57171461 | Msa0364350:exon | 55.0% | |
| CTTGTAGGAACTCGGCTGGT+AGG | + | chr3_1:57172579-57172598 | Msa0364350:intron | 55.0% | |
| GTACTAGCACGCTCGTAAGC+AGG | - | chr3_1:57172804-57172823 | None:intergenic | 55.0% | |
| GCTTACGAGCGTGCTAGTAC+AGG | + | chr3_1:57172804-57172823 | Msa0364350:CDS | 55.0% | |
| ACAAGGACCAACCAGCCGAA+AGG | - | chr3_1:57172836-57172855 | None:intergenic | 55.0% | |
| ACAGGTCGTCTCCTTTCGGC+TGG | + | chr3_1:57172822-57172841 | Msa0364350:CDS | 60.0% | |
| GTCGTCTCCTTTCGGCTGGT+TGG | + | chr3_1:57172826-57172845 | Msa0364350:CDS | 60.0% | |
| ACAGGTCGTCTCCTTTCGGC+TGG | + | chr3_1:57172822-57172841 | Msa0364350:CDS | 60.0% | |
| GTCGTCTCCTTTCGGCTGGT+TGG | + | chr3_1:57172826-57172845 | Msa0364350:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 57171423 | 57172947 | 57171423 | ID=Msa0364350;Name=Msa0364350 |
| chr3_1 | mRNA | 57171423 | 57172947 | 57171423 | ID=Msa0364350-mRNA-1;Parent=Msa0364350;Name=Msa0364350-mRNA-1;_AED=0.11;_eAED=0.11;_QI=33|0.33|0.25|1|1|1|4|0|283 |
| chr3_1 | exon | 57171423 | 57171527 | 57171423 | ID=Msa0364350-mRNA-1:exon:10726;Parent=Msa0364350-mRNA-1 |
| chr3_1 | exon | 57171791 | 57172190 | 57171791 | ID=Msa0364350-mRNA-1:exon:10727;Parent=Msa0364350-mRNA-1 |
| chr3_1 | exon | 57172460 | 57172596 | 57172460 | ID=Msa0364350-mRNA-1:exon:10728;Parent=Msa0364350-mRNA-1 |
| chr3_1 | exon | 57172705 | 57172947 | 57172705 | ID=Msa0364350-mRNA-1:exon:10729;Parent=Msa0364350-mRNA-1 |
| chr3_1 | five_prime_UTR | 57171423 | 57171455 | 57171423 | ID=Msa0364350-mRNA-1:five_prime_utr;Parent=Msa0364350-mRNA-1 |
| chr3_1 | CDS | 57171456 | 57171527 | 57171456 | ID=Msa0364350-mRNA-1:cds;Parent=Msa0364350-mRNA-1 |
| chr3_1 | CDS | 57171791 | 57172190 | 57171791 | ID=Msa0364350-mRNA-1:cds;Parent=Msa0364350-mRNA-1 |
| chr3_1 | CDS | 57172460 | 57172596 | 57172460 | ID=Msa0364350-mRNA-1:cds;Parent=Msa0364350-mRNA-1 |
| chr3_1 | CDS | 57172705 | 57172947 | 57172705 | ID=Msa0364350-mRNA-1:cds;Parent=Msa0364350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
