AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0365290

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365290 MtrunA17_Chr1g0187591 75.498 653 99 4 1 592 1 653 0.0 932
Msa0365290 MtrunA17_Chr1g0187591 45.583 283 101 6 702 974 299 538 1.64e-46 177
Msa0365290 MtrunA17_Chr3g0105131 69.081 566 111 6 1 563 1 505 0.0 726
Msa0365290 MtrunA17_Chr3g0105131 43.137 306 122 9 702 991 236 505 2.57e-42 162
Msa0365290 MtrunA17_Chr3g0105101 78.404 426 37 4 37 460 29 401 0.0 641
Msa0365290 MtrunA17_Chr3g0105101 46.429 196 77 5 702 897 234 401 8.52e-35 137
Msa0365290 MtrunA17_Chr5g0430211 50.345 725 235 19 1 623 1 702 0.0 608
Msa0365290 MtrunA17_Chr5g0430211 32.099 324 154 11 702 974 300 608 2.72e-21 100
Msa0365290 MtrunA17_Chr5g0437251 46.737 659 247 15 28 604 25 661 2.15e-177 533
Msa0365290 MtrunA17_Chr5g0437251 26.866 335 164 11 700 976 285 596 2.47e-12 71.2
Msa0365290 MtrunA17_Chr3g0113651 43.793 580 199 18 31 584 8 486 4.47e-134 414
Msa0365290 MtrunA17_Chr7g0257831 46.266 482 190 8 30 450 44 517 2.45e-129 409
Msa0365290 MtrunA17_Chr3g0105121 71.959 296 34 5 722 1007 100 356 3.18e-124 382
Msa0365290 MtrunA17_Chr3g0105121 53.226 372 137 7 224 581 8 356 2.41e-108 340
Msa0365290 MtrunA17_Chr3g0088521 39.104 670 273 21 30 588 42 687 1.20e-121 389
Msa0365290 MtrunA17_Chr1g0171151 40.948 464 222 11 32 449 30 487 1.49e-98 323
Msa0365290 MtrunA17_Chr3g0092171 44.118 374 177 8 30 389 80 435 2.39e-87 290
Msa0365290 MtrunA17_Chr3g0105151 58.921 241 77 7 382 606 1 235 2.19e-72 239
Msa0365290 MtrunA17_Chr3g0105151 60.360 222 67 2 814 1014 1 222 6.12e-72 238
Msa0365290 MtrunA17_Chr3g0092221 55.051 198 79 4 202 399 137 324 8.71e-67 230
Msa0365290 MtrunA17_Chr3g0105141 67.832 143 45 1 190 331 1 143 1.58e-66 220
Msa0365290 MtrunA17_Chr8g0389561 47.032 219 105 4 168 380 29 242 1.49e-56 200
Msa0365290 MtrunA17_Chr6g0487481 61.364 132 42 1 196 327 83 205 1.51e-53 191
Msa0365290 MtrunA17_Chr3g0105111 79.130 115 11 1 499 613 1 102 4.05e-53 181
Msa0365290 MtrunA17_Chr3g0105111 55.405 74 26 3 946 1014 5 76 7.50e-12 63.2
Msa0365290 MtrunA17_Chr3g0135351 56.774 155 55 4 215 368 43 186 3.72e-52 184
Msa0365290 MtrunA17_Chr2g0324781 62.162 111 42 0 225 335 77 187 6.11e-48 176
Msa0365290 MtrunA17_Chr4g0040391 58.879 107 44 0 221 327 56 162 1.28e-45 167
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0365290 AT5G58620.1 49.833 600 247 20 21 583 2 584 2.00e-166 502
Msa0365290 AT2G40140.2 46.321 598 263 14 1 583 1 555 2.74e-160 486
Msa0365290 AT2G40140.1 46.321 598 263 14 1 583 1 555 2.74e-160 486
Msa0365290 AT3G55980.1 44.918 610 278 15 1 599 1 563 6.85e-156 473
Msa0365290 AT3G55980.2 44.918 610 278 15 1 599 68 630 7.45e-155 473
Msa0365290 AT5G12850.1 41.390 633 269 22 25 565 34 656 3.76e-128 405
Msa0365290 AT2G41900.1 46.304 460 200 9 25 445 40 491 4.93e-125 397
Msa0365290 AT5G07500.1 61.983 121 46 0 207 327 34 154 6.85e-54 188
Msa0365290 AT2G25900.2 60.465 129 51 0 221 349 86 214 1.61e-53 190
Msa0365290 AT2G25900.1 60.465 129 51 0 221 349 86 214 1.61e-53 190
Msa0365290 AT4G29190.1 56.463 147 49 1 214 360 68 199 4.95e-53 190
Msa0365290 AT2G19810.1 63.934 122 42 1 210 329 61 182 2.91e-52 187
Msa0365290 AT1G03790.1 52.903 155 65 3 192 342 53 203 7.62e-49 179
Msa0365290 AT5G44260.1 58.594 128 48 2 203 329 42 165 5.75e-47 173

Find 229 sgRNAs with CRISPR-Local

Find 363 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAACCTTGAAGGCTATTT+TGG 0.068267 3_1:+59242419 Msa0365290:CDS
ATTGAAAACCTACTTGTTTA+AGG 0.075570 3_1:-59237954 None:intergenic
GCTCTTCATTGTGCTGTTTC+TGG 0.092938 3_1:+59237748 Msa0365290:CDS
CTTATGGTTGCTGCCTTATT+TGG 0.182687 3_1:+59237646 Msa0365290:CDS
CTTACCAATTCAAATGTTAT+TGG 0.199131 3_1:+59238816 Msa0365290:CDS
TTGTCAAACTGGTTTGATTA+AGG 0.208098 3_1:+59237435 Msa0365290:CDS
ATCATCTACGCCTTCTAGTA+TGG 0.227210 3_1:-59237920 None:intergenic
ATGGAGCATTCTACGATTTC+TGG 0.236897 3_1:+59238948 Msa0365290:CDS
AAATAGCCTTCAAGGTTAAT+AGG 0.274059 3_1:-59242416 None:intergenic
TTTCTAAAACCTTCAAGTTT+TGG 0.275697 3_1:+59240969 Msa0365290:CDS
TGATCTAACCACATTAAAAT+TGG 0.278740 3_1:-59242522 None:intergenic
TTGATTAAGGAAAATGAATA+TGG 0.284568 3_1:+59237448 Msa0365290:CDS
TTCACATATGCTGTTGAAAA+AGG 0.290086 3_1:+59237541 Msa0365290:CDS
CACACCCTTGCTTCCAAATA+AGG 0.291991 3_1:-59237659 None:intergenic
ATGAGGAAATCTTATTCTTT+CGG 0.306520 3_1:+59239029 Msa0365290:CDS
ACAGAACCGCGTCGGGATTA+TGG 0.307094 3_1:-59239208 None:intergenic
CAAGGGCTTATTCTCATGAT+TGG 0.318225 3_1:+59238118 Msa0365290:CDS
GCATTCTACGATTTCTGGTT+GGG 0.328951 3_1:+59238953 Msa0365290:CDS
GTGTCCCTTGCCCCGAGTTT+CGG 0.333825 3_1:+59238211 Msa0365290:CDS
CTTTATTGAGCGCAGTAGTA+TGG 0.340801 3_1:+59238884 Msa0365290:CDS
GAACGCAAACCAGCAACTTT+GGG 0.341182 3_1:+59238779 Msa0365290:CDS
CGATCCAATAACATTTGAAT+TGG 0.345672 3_1:-59238820 None:intergenic
AATAGAAAACCTTGTCAAAC+TGG 0.355053 3_1:+59237424 Msa0365290:CDS
GTCTTTCATCCCCTTCAAAT+AGG 0.355872 3_1:+59238676 Msa0365290:CDS
TATTGATCAAATTCCATTGT+TGG 0.357494 3_1:-59239161 None:intergenic
TGGTTAGATCACAACAGTTC+AGG 0.360050 3_1:+59242534 Msa0365290:CDS
GAGGGTTGGATCGAAGGAAA+TGG 0.360734 3_1:+59237603 Msa0365290:CDS
TTCTCGGCATCTGAAGGGTT+GGG 0.369174 3_1:-59238587 None:intergenic
CTACTTGACCCTTCTATCAT+TGG 0.369851 3_1:-59242377 None:intergenic
ATGCCGAATCCAATGATAGA+AGG 0.372921 3_1:+59242368 Msa0365290:CDS
AATGATAGCCCCAAAGTTGC+TGG 0.380794 3_1:-59238788 None:intergenic
GAAGGGTCAAGTAGGCTTGC+TGG 0.383335 3_1:+59242386 Msa0365290:CDS
AGAACGCAAACCAGCAACTT+TGG 0.384644 3_1:+59238778 Msa0365290:CDS
ATGCTTTCTCTTTCACTCTC+TGG 0.395834 3_1:+59241220 Msa0365290:CDS
TTCACCTAGTGCTTCTTCAA+TGG 0.396899 3_1:+59238443 Msa0365290:CDS
GACCCTTCTATCATTGGATT+CGG 0.397498 3_1:-59242371 None:intergenic
TGAAGAGAGGACACCTCTTA+TGG 0.399251 3_1:+59237630 Msa0365290:CDS
TGCTGCTCTCGATAAAGTTC+TGG 0.399385 3_1:-59242604 None:intergenic
CCGTGATAGAAAATTAGAAT+TGG 0.404340 3_1:+59242703 Msa0365290:CDS
AAGTCGATGAGGTAGGATTA+TGG 0.417281 3_1:+59237572 Msa0365290:CDS
GTATCTTCGGTTCAAGGAAT+AGG 0.421539 3_1:+59237887 Msa0365290:CDS
AGGGTTGGATCGAAGGAAAT+GGG 0.426387 3_1:+59237604 Msa0365290:CDS
CTAGTAGTATCTTCGGTTCA+AGG 0.426572 3_1:+59237881 Msa0365290:CDS
ATGACCCAAAATAGCCTTCA+AGG 0.426670 3_1:-59242424 None:intergenic
ATCTGTTTCTCGGCATCTGA+AGG 0.426852 3_1:-59238593 None:intergenic
GGCCACATGGTTCTTTCTGC+AGG 0.427795 3_1:-59242224 None:intergenic
GGTGTGTTGTCTTATATTCT+CGG 0.428366 3_1:+59237676 Msa0365290:CDS
CGAGTGTCCATTTGTTCACC+CGG 0.428988 3_1:+59238143 Msa0365290:CDS
TCAAAGTGAAGCCTTGTTCA+AGG 0.431149 3_1:+59238100 Msa0365290:CDS
GCATGATCCTTTCCGAAACT+CGG 0.433294 3_1:-59238223 None:intergenic
TTGAAAACTGCACTGAATGC+TGG 0.433495 3_1:+59238615 Msa0365290:CDS
TTTCTCGGCATCTGAAGGGT+TGG 0.435722 3_1:-59238588 None:intergenic
CAACTTCAACATTACAATGT+TGG 0.436387 3_1:-59242833 None:intergenic
GAGCCTTCAACTGCCTTCTC+CGG 0.438785 3_1:+59242671 Msa0365290:CDS
TCTGGTTGGGGCTCGCCTGA+TGG 0.441010 3_1:+59238966 Msa0365290:CDS
TACATCAAATGTTGATGATC+AGG 0.442359 3_1:+59242757 Msa0365290:CDS
GCAAACCCTTCTGGTGCATC+CGG 0.443581 3_1:-59238337 None:intergenic
TGCTAGAGATAATACTCATC+TGG 0.443782 3_1:+59242319 Msa0365290:CDS
TATATCTCATTGTTTATGTC+AGG 0.444342 3_1:-59238048 None:intergenic
TGCCACATGGTTCCAGTAGC+AGG 0.445009 3_1:-59238537 None:intergenic
ACTCCATCTTCACCTGCTAC+TGG 0.450958 3_1:+59238525 Msa0365290:CDS
ACAATCTCCGACAGCAATGC+AGG 0.452955 3_1:+59242451 Msa0365290:CDS
TTCAACGGGCGAAGTTCCTC+AGG 0.454486 3_1:-59241987 None:intergenic
TCTATCACGGGAGCGCCAAC+CGG 0.454780 3_1:-59242690 None:intergenic
TTATGGTATGGAAGGAGGGT+TGG 0.455006 3_1:+59237589 Msa0365290:CDS
TAATCTTTCTTCTCAGTTCG+AGG 0.455693 3_1:-59238006 None:intergenic
TTCTGCTACCTCAGTTGCCA+TGG 0.458161 3_1:+59238929 Msa0365290:CDS
TTGCTCGGCATCTGAGGTGT+AGG 0.459489 3_1:-59242185 None:intergenic
TTGCTCGGCATCTGAGGTGT+AGG 0.459489 3_1:-59242275 None:intergenic
CGTGATAGAAAATTAGAATT+GGG 0.460547 3_1:+59242704 Msa0365290:CDS
CCATTGATGTGAATGATAAC+TGG 0.461223 3_1:+59237833 Msa0365290:CDS
AGATTCTACCTCAGTTGCAT+TGG 0.462466 3_1:+59242649 Msa0365290:CDS
AACTGGTACTAGCATTCAAC+GGG 0.465209 3_1:-59242001 None:intergenic
CCCTATCTGAGCCGCACTCT+CGG 0.465985 3_1:-59237720 None:intergenic
ATGTGAAGGCAAAGCAGAAC+TGG 0.466124 3_1:-59242018 None:intergenic
CTTCAACTGCCTTCTCCGGT+TGG 0.466199 3_1:+59242675 Msa0365290:CDS
AATGCAACTGAGGTAGAATC+TGG 0.470321 3_1:-59242647 None:intergenic
GGCAAAGACAGAACCGCGTC+GGG 0.470484 3_1:-59239215 None:intergenic
CAACCGGAGAAGGCAGTTGA+AGG 0.471582 3_1:-59242674 None:intergenic
TGGAAGGAGGGTTGGATCGA+AGG 0.473211 3_1:+59237597 Msa0365290:CDS
TGCTGCCTTATTTGGAAGCA+AGG 0.473427 3_1:+59237654 Msa0365290:CDS
ACTCTTGCAAGCCTATTTGA+AGG 0.473796 3_1:-59238687 None:intergenic
CAAGATTGGCTCAAGGGAGC+AGG 0.476679 3_1:+59241542 Msa0365290:CDS
CCAGTTATCATTCACATCAA+TGG 0.477903 3_1:-59237833 None:intergenic
AAATTTAGCAGAAACAAGAT+TGG 0.477979 3_1:+59241528 Msa0365290:intron
AATAAGGCAGCAACCATAAG+AGG 0.478339 3_1:-59237643 None:intergenic
ATTGAGTTCATTGCCGCGGA+TGG 0.478340 3_1:-59239003 None:intergenic
ATACTACAACCCATACTAGA+AGG 0.480130 3_1:+59237910 Msa0365290:CDS
CAAGATATGATGCCCTTTCG+AGG 0.483484 3_1:+59242576 Msa0365290:CDS
GGCCACATGGTTCTTCCTGC+AGG 0.483695 3_1:-59242134 None:intergenic
TGCTCCATGTACAAATGCTC+TGG 0.486006 3_1:-59239236 None:intergenic
CAGGTGTAATGATATTTCCT+TGG 0.486054 3_1:-59238189 None:intergenic
GTGAATCCTATTAACCTTGA+AGG 0.487609 3_1:+59242410 Msa0365290:CDS
AGGCTTTGCAAGGATGGAAC+CGG 0.489237 3_1:+59238318 Msa0365290:CDS
CGACCGTTGTATGCTTCTAC+CGG 0.490079 3_1:+59238387 Msa0365290:CDS
AGCATTCTACGATTTCTGGT+TGG 0.490186 3_1:+59238952 Msa0365290:CDS
AGAACAAGGCTTTGCAAGGA+TGG 0.491396 3_1:+59238312 Msa0365290:CDS
GGTTAGATCACAACAGTTCA+GGG 0.493239 3_1:+59242535 Msa0365290:CDS
ACGGGAGCGCCAACCGGAGA+AGG 0.494199 3_1:-59242684 None:intergenic
TCGGTTAACATCAACGCGAC+TGG 0.494406 3_1:-59237701 None:intergenic
CATGATCCTTTCCGAAACTC+GGG 0.495650 3_1:-59238222 None:intergenic
AGCCTTGTTCTATATTGAGC+AGG 0.500362 3_1:-59238300 None:intergenic
GTCCAAGGCGGCATCGATGA+AGG 0.500707 3_1:-59242092 None:intergenic
ACCGAGAGTGCGGCTCAGAT+AGG 0.501399 3_1:+59237719 Msa0365290:CDS
AGGTGAAGGCAAAGCAGAAC+CGG 0.502979 3_1:-59238406 None:intergenic
GAATGCCATTACGTCATCTT+CGG 0.504666 3_1:-59237521 None:intergenic
CTCATTGTTTATGTCAGGTA+GGG 0.505295 3_1:-59238043 None:intergenic
AATCTGTTGCTCGGCATCTG+AGG 0.505565 3_1:-59242281 None:intergenic
TGTGAAAGATGCTCCAACAA+TGG 0.508902 3_1:+59239148 Msa0365290:CDS
TCGGTATCTAGTAGTATCTT+CGG 0.509155 3_1:+59237874 Msa0365290:CDS
CATTCTACGATTTCTGGTTG+GGG 0.510676 3_1:+59238954 Msa0365290:CDS
TGAGGTAGAATCTGGAAGCT+TGG 0.511466 3_1:-59242639 None:intergenic
GATGATTTCCTTAAACAAGT+AGG 0.511967 3_1:+59237946 Msa0365290:CDS
TGCCTTCATCGATGCCGCCT+TGG 0.512659 3_1:+59242090 Msa0365290:CDS
CCTTTCCGAAACTCGGGGCA+AGG 0.514381 3_1:-59238216 None:intergenic
TTAAAATTGGTAAGGTGAGA+AGG 0.515063 3_1:-59242509 None:intergenic
GAAACAGCACCAAAACTTGA+AGG 0.516363 3_1:-59240978 None:intergenic
GTTCCAGTAGCAGGTGAAGA+TGG 0.516449 3_1:-59238528 None:intergenic
CTCTTGCAAGCCTATTTGAA+GGG 0.516540 3_1:-59238686 None:intergenic
CAAAGTGAAGCCTTGTTCAA+GGG 0.517860 3_1:+59238101 Msa0365290:CDS
TACTGCGCTCAATAAAGCTC+TGG 0.519334 3_1:-59238878 None:intergenic
TAGGATTATGGTATGGAAGG+AGG 0.520921 3_1:+59237584 Msa0365290:CDS
AGGTAGGATTATGGTATGGA+AGG 0.522426 3_1:+59237581 Msa0365290:CDS
TCAGGTAGGGATGGATCAAT+CGG 0.525749 3_1:-59238030 None:intergenic
AGGATTATGGTATGGAAGGA+GGG 0.525824 3_1:+59237585 Msa0365290:CDS
CGCCTGATGGAAAATTAGAC+TGG 0.526081 3_1:+59238979 Msa0365290:CDS
AATCTGTTGCTCGGCATCTG+AGG 0.528491 3_1:-59242191 None:intergenic
GATGGATTATTAAGATATGA+AGG 0.531625 3_1:+59242779 Msa0365290:CDS
AAACTCGGGGCAAGGGACAC+AGG 0.532559 3_1:-59238208 None:intergenic
AAGGATATATCTGAAGTTGT+TGG 0.532786 3_1:-59242490 None:intergenic
TTCAGCCGAAGATGACGTAA+TGG 0.534190 3_1:+59237516 Msa0365290:CDS
TTGTTTATGTCAGGTAGGGA+TGG 0.536185 3_1:-59238039 None:intergenic
TATGATATCAATCTGTTGCT+CGG 0.538210 3_1:-59242200 None:intergenic
CCGAGAGTGCGGCTCAGATA+GGG 0.539522 3_1:+59237720 Msa0365290:CDS
CAGAAACAAGATTGGCTCAA+GGG 0.540047 3_1:+59241536 Msa0365290:intron
ATTATTAAGATATGAAGGTA+TGG 0.540701 3_1:+59242784 Msa0365290:CDS
ACGCAAGGCGCCGTGATCCA+AGG 0.541532 3_1:+59238172 Msa0365290:CDS
GCTGCCTTATTTGGAAGCAA+GGG 0.541989 3_1:+59237655 Msa0365290:CDS
AGTTCTGGCTCTGCCTCGAA+AGG 0.544056 3_1:-59242589 None:intergenic
TAACCACATTAAAATTGGTA+AGG 0.544067 3_1:-59242517 None:intergenic
TCTCATTGTTTATGTCAGGT+AGG 0.546336 3_1:-59238044 None:intergenic
AAGCAAAAGCTTGATAATCT+CGG 0.547575 3_1:-59237788 None:intergenic
TCATCTACGCCTTCTAGTAT+GGG 0.552732 3_1:-59237919 None:intergenic
TGCTCGGCATCTGAGGTGTA+GGG 0.552789 3_1:-59242184 None:intergenic
TGCTCGGCATCTGAGGTGTA+GGG 0.552789 3_1:-59242274 None:intergenic
TGCTACTGGAACCATGTGGC+AGG 0.553966 3_1:+59238539 Msa0365290:CDS
TATGGTTAATGAACTTGTGA+AGG 0.556348 3_1:+59242802 Msa0365290:CDS
CGGGTGAACAAATGGACACT+CGG 0.558339 3_1:-59238142 None:intergenic
GCTCTGGCTTTGATTTGAGA+AGG 0.560903 3_1:-59238862 None:intergenic
TCTGTTTCTCGGCATCTGAA+GGG 0.564138 3_1:-59238592 None:intergenic
GTGCAACGACTTGTTTGTCT+CGG 0.565690 3_1:+59237855 Msa0365290:CDS
GCAGTATTCAATCTGTTGCT+CGG 0.567984 3_1:-59242290 None:intergenic
GATGAGGTAGGATTATGGTA+TGG 0.568486 3_1:+59237577 Msa0365290:CDS
CACTAGCAACACTTCAACAA+TGG 0.568642 3_1:+59242730 Msa0365290:CDS
GATATTGCAGACGGTGTCCA+AGG 0.573927 3_1:-59242107 None:intergenic
GCAGGTGAAGATGGAGTCGA+AGG 0.573953 3_1:-59238519 None:intergenic
CGGAAAGGATCATGCAGCAA+AGG 0.576344 3_1:+59238231 Msa0365290:CDS
CTTTCCGAAACTCGGGGCAA+GGG 0.578389 3_1:-59238215 None:intergenic
CAATGATAGAAGGGTCAAGT+AGG 0.578738 3_1:+59242378 Msa0365290:CDS
GTGGAGCAGCAACACGATGT+AGG 0.579328 3_1:+59237979 Msa0365290:CDS
GGTGAATTTGAATATGATGT+AGG 0.581011 3_1:-59238426 None:intergenic
GTATACATTGCAGAAGCACT+TGG 0.582995 3_1:-59242059 None:intergenic
GCAGAAACAAGATTGGCTCA+AGG 0.584289 3_1:+59241535 Msa0365290:intron
CCTTGCCCCGAGTTTCGGAA+AGG 0.584921 3_1:+59238216 Msa0365290:CDS
CTTCTTTGCTCACAAACCTG+AGG 0.585534 3_1:+59241971 Msa0365290:CDS
TGCCGAATCCAATGATAGAA+GGG 0.587494 3_1:+59242369 Msa0365290:CDS
ATATAGAACAAGGCTTTGCA+AGG 0.588932 3_1:+59238308 Msa0365290:CDS
GTACTAATCTGAGTCGGAGT+CGG 0.588992 3_1:-59242245 None:intergenic
TGATGCATCTGCATTGTGAT+CGG 0.591515 3_1:-59238756 None:intergenic
GTTCTGGCTCTGCCTCGAAA+GGG 0.592388 3_1:-59242588 None:intergenic
GCAATGAACTCAATAAAATG+AGG 0.593274 3_1:+59239012 Msa0365290:CDS
AATGATATTTCCTTGGATCA+CGG 0.593424 3_1:-59238182 None:intergenic
AAGAAGAACTTACATGAGCA+AGG 0.594088 3_1:-59241000 None:intergenic
CTGAGTCGGAGTCGGCCACA+TGG 0.594746 3_1:-59242147 None:intergenic
GATGGAGTCGAAGGTGGCGT+TGG 0.595221 3_1:-59238510 None:intergenic
AAGGCATCTCCTCTGAATTG+TGG 0.597437 3_1:-59238843 None:intergenic
CAATCTCCGACAGCAATGCA+GGG 0.598628 3_1:+59242452 Msa0365290:CDS
GTACGATTCTGAGTCGGAGT+CGG 0.598804 3_1:-59242155 None:intergenic
GAGTGTCCATTTGTTCACCC+GGG 0.599662 3_1:+59238144 Msa0365290:CDS
AAATAATAAGTCATGTGCAA+CGG 0.601617 3_1:+59237397 None:intergenic
GAACTGGTACTAGCATTCAA+CGG 0.603434 3_1:-59242002 None:intergenic
TCAAATGTTGATGATCAGGA+TGG 0.604566 3_1:+59242761 Msa0365290:CDS
ATGGAACCGGATGCACCAGA+AGG 0.605474 3_1:+59238331 Msa0365290:CDS
CTGAGTCGGAGTCGGCCACA+TGG 0.607724 3_1:-59242237 None:intergenic
TGGCAAAGACAGAACCGCGT+CGG 0.609621 3_1:-59239216 None:intergenic
TGATACCCCTGCATTGCTGT+CGG 0.611093 3_1:-59242458 None:intergenic
ATTGGATCGCCACAATTCAG+AGG 0.612885 3_1:+59238834 Msa0365290:CDS
TCTGCAATATCATATCCTGC+AGG 0.614316 3_1:+59242119 Msa0365290:CDS
CTGAATCTGAGCCTGCCACA+TGG 0.614597 3_1:-59238550 None:intergenic
TCTTGCAAGCCTATTTGAAG+GGG 0.615140 3_1:-59238685 None:intergenic
ACTGTAGTACTAATCTGAGT+CGG 0.618849 3_1:-59242251 None:intergenic
AGTGTCCATTTGTTCACCCG+GGG 0.625388 3_1:+59238145 Msa0365290:CDS
TGAGAATAAGCCCTTGAACA+AGG 0.627841 3_1:-59238111 None:intergenic
AACGCAAACCAGCAACTTTG+GGG 0.628398 3_1:+59238780 Msa0365290:CDS
GAACATGAAGTCGATGAGGT+AGG 0.628445 3_1:+59237565 Msa0365290:CDS
TTAGATTAAGAACACAACAA+TGG 0.630060 3_1:-59241262 None:intergenic
GAATCCATTGAAGAAGCACT+AGG 0.630832 3_1:-59238447 None:intergenic
GGTGAAGATGGAGTCGAAGG+TGG 0.635284 3_1:-59238516 None:intergenic
CTTTATCGAGAGCAGCAGCA+TGG 0.636540 3_1:+59242610 Msa0365290:CDS
TTTGAATATGATGTAGGTGA+AGG 0.636602 3_1:-59238420 None:intergenic
TTTGAATATAATGTATGTGA+AGG 0.637611 3_1:-59242032 None:intergenic
GCAGATTGTATCGAAGAAGA+CGG 0.640822 3_1:-59238486 None:intergenic
ATGGCAACTGAGGTAGCAGA+AGG 0.642309 3_1:-59238927 None:intergenic
GCAGGATATGATATTGCAGA+CGG 0.643899 3_1:-59242116 None:intergenic
ATCCTGCTCAATATAGAACA+AGG 0.645051 3_1:+59238298 Msa0365290:CDS
AGAATGCTCCATGGCAACTG+AGG 0.645687 3_1:-59238937 None:intergenic
TGGAACCGGATGCACCAGAA+GGG 0.647933 3_1:+59238332 Msa0365290:CDS
AGGAAATGGGATATGAAGAG+AGG 0.649200 3_1:+59237617 Msa0365290:CDS
AAAATACATCTGGATCGTCG+TGG 0.649359 3_1:-59239097 None:intergenic
TGAAGGCTCCAATGCAACTG+AGG 0.649434 3_1:-59242657 None:intergenic
ACTGTAGTACGATTCTGAGT+CGG 0.653294 3_1:-59242161 None:intergenic
AGAAATCGTAGAATGCTCCA+TGG 0.657091 3_1:-59238946 None:intergenic
AAATTAGACTGGTCCATCCG+CGG 0.659387 3_1:+59238990 Msa0365290:CDS
TTAATCAAACCAGTTTGACA+AGG 0.662325 3_1:-59237433 None:intergenic
ATGATCCTTTCCGAAACTCG+GGG 0.664716 3_1:-59238221 None:intergenic
GTTGATGTTAACCGAGAGTG+CGG 0.666864 3_1:+59237709 Msa0365290:CDS
AGGCGAACATGAAGTCGATG+AGG 0.683016 3_1:+59237561 Msa0365290:CDS
AATCTCCGACAGCAATGCAG+GGG 0.691632 3_1:+59242453 Msa0365290:CDS
TTGAAGGGGATGAAAGACTG+AGG 0.712422 3_1:-59238671 None:intergenic
GTTAGATCACAACAGTTCAG+GGG 0.713618 3_1:+59242536 Msa0365290:CDS
GTGTCCATTTGTTCACCCGG+GGG 0.714093 3_1:+59238146 Msa0365290:CDS
ATTGCAGACGGTGTCCAAGG+CGG 0.715505 3_1:-59242104 None:intergenic
AGAAACAGCACAATGAAGAG+CGG 0.716468 3_1:-59237746 None:intergenic
GATGCTTGTGAATATGCACA+CGG 0.730998 3_1:+59238255 Msa0365290:CDS
CACCTGCTACTGGAACCATG+TGG 0.752685 3_1:+59238535 Msa0365290:CDS
GAACCGGTAGAAGCATACAA+CGG 0.780700 3_1:-59238390 None:intergenic
ATCCTGCAGGAAGAACCATG+TGG 0.814597 3_1:+59242132 Msa0365290:CDS
ATCCTGCAGAAAGAACCATG+TGG 0.834161 3_1:+59242222 Msa0365290:CDS
GCAGTGCCATAATCCCGACG+CGG 0.838635 3_1:+59239202 Msa0365290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAATAAGTAAAAAAAC+TGG - chr3_1:59240080-59240099 None:intergenic 10.0%
!! AAAAATACTATATATATACA+AGG + chr3_1:59240131-59240150 Msa0365290:intron 10.0%
!! AAAATACTATATATATACAA+GGG + chr3_1:59240132-59240151 Msa0365290:intron 10.0%
!!! AAAAAGTTTTTAAAGTTAGT+AGG - chr3_1:59238717-59238736 None:intergenic 15.0%
!!! ACTAACTTTAAAAACTTTTT+CGG + chr3_1:59238717-59238736 Msa0365290:CDS 15.0%
!! TGAAATATGAAAAATGAAAT+TGG - chr3_1:59239582-59239601 None:intergenic 15.0%
!! ATAAGAAAAATACATAAAGA+GGG - chr3_1:59241034-59241053 None:intergenic 15.0%
!! AATAAGAAAAATACATAAAG+AGG - chr3_1:59241035-59241054 None:intergenic 15.0%
!!! ATTTGGTTATTTTGTTAATA+AGG + chr3_1:59241377-59241396 Msa0365290:intron 15.0%
!! TCATATCTTGAATTAAAAAA+TGG - chr3_1:59242566-59242585 None:intergenic 15.0%
!! TTGATTAAGGAAAATGAATA+TGG + chr3_1:59237448-59237467 Msa0365290:CDS 20.0%
!!! CTAACTTTAAAAACTTTTTC+GGG + chr3_1:59238718-59238737 Msa0365290:CDS 20.0%
!!! TCTAAGAAGTTTTTATTCAT+TGG + chr3_1:59239851-59239870 Msa0365290:intron 20.0%
!! TTATAGAAAGCTTAACATAT+TGG + chr3_1:59239923-59239942 Msa0365290:intron 20.0%
!!! ACTCAATATTGATATTTTCA+GGG - chr3_1:59239972-59239991 None:intergenic 20.0%
!!! AACTCAATATTGATATTTTC+AGG - chr3_1:59239973-59239992 None:intergenic 20.0%
!!! TTGATGAATGGATTTTTTTT+TGG - chr3_1:59240027-59240046 None:intergenic 20.0%
!! TAGTAAAATCAACTAATTGT+TGG + chr3_1:59240218-59240237 Msa0365290:intron 20.0%
!!! AATTGTTGGTAATATGTAAA+TGG + chr3_1:59240232-59240251 Msa0365290:intron 20.0%
!!! TTTGTTGTTTTATGATTTTG+AGG - chr3_1:59240676-59240695 None:intergenic 20.0%
!! TAAAAGAACTTACATGAATA+AGG - chr3_1:59240779-59240798 None:intergenic 20.0%
!!! TTTTTCTTATTCTTCTTGAT+AGG + chr3_1:59241044-59241063 Msa0365290:intron 20.0%
!! AAAACAATACAAAGAATTCT+GGG - chr3_1:59241354-59241373 None:intergenic 20.0%
!! CAAAAAATAAGAACAAACAA+TGG - chr3_1:59241418-59241437 None:intergenic 20.0%
!!! TTTCTGAAATTCATTACAAT+GGG - chr3_1:59241726-59241745 None:intergenic 20.0%
!!! ATTTCTGAAATTCATTACAA+TGG - chr3_1:59241727-59241746 None:intergenic 20.0%
!! TTTGAATATAATGTATGTGA+AGG - chr3_1:59242035-59242054 None:intergenic 20.0%
!! ATTATTAAGATATGAAGGTA+TGG + chr3_1:59242784-59242803 Msa0365290:CDS 20.0%
! ATTGAAAACCTACTTGTTTA+AGG - chr3_1:59237957-59237976 None:intergenic 25.0%
!! TAAACAAGTAGGTTTTCAAT+TGG + chr3_1:59237957-59237976 Msa0365290:CDS 25.0%
! TATATCTCATTGTTTATGTC+AGG - chr3_1:59238051-59238070 None:intergenic 25.0%
! CTTACCAATTCAAATGTTAT+TGG + chr3_1:59238816-59238835 Msa0365290:CDS 25.0%
! ATGAGGAAATCTTATTCTTT+CGG + chr3_1:59239029-59239048 Msa0365290:CDS 25.0%
!!! TATTTTTAAGGCATGAATCT+TGG + chr3_1:59239114-59239133 Msa0365290:CDS 25.0%
!!! ATTTTTAAGGCATGAATCTT+GGG + chr3_1:59239115-59239134 Msa0365290:CDS 25.0%
! TATTGATCAAATTCCATTGT+TGG - chr3_1:59239164-59239183 None:intergenic 25.0%
!! TATAGATGCTGATTATTTGT+AGG + chr3_1:59239351-59239370 Msa0365290:intron 25.0%
! TGTGCATATAATGTTTAAGA+TGG + chr3_1:59239625-59239644 Msa0365290:intron 25.0%
! GGTATCAAACTATAATATGA+AGG - chr3_1:59239715-59239734 None:intergenic 25.0%
!!! ATGTTTTAGCATAATCTGAT+AGG + chr3_1:59239762-59239781 Msa0365290:intron 25.0%
!!! CCAATACTTTTTTTGATGAA+TGG - chr3_1:59240039-59240058 None:intergenic 25.0%
!! CCATTCATCAAAAAAAGTAT+TGG + chr3_1:59240036-59240055 Msa0365290:intron 25.0%
! ATCCTCAAAATGCAAAATTA+AGG + chr3_1:59240314-59240333 Msa0365290:intron 25.0%
!! ATCCTTAATTTTGCATTTTG+AGG - chr3_1:59240319-59240338 None:intergenic 25.0%
!!! TTTCTAAAACCTTCAAGTTT+TGG + chr3_1:59240969-59240988 Msa0365290:CDS 25.0%
!!! GAGATTACAATGTGTTTTTT+TGG + chr3_1:59241111-59241130 Msa0365290:intron 25.0%
!! CTAAGAAAGTTTCTGAAAAA+TGG + chr3_1:59241137-59241156 Msa0365290:intron 25.0%
! TTAGATTAAGAACACAACAA+TGG - chr3_1:59241265-59241284 None:intergenic 25.0%
! CTAACAATATTAAATGCAGT+TGG + chr3_1:59241281-59241300 Msa0365290:intron 25.0%
! CAAAACAATACAAAGAATTC+TGG - chr3_1:59241355-59241374 None:intergenic 25.0%
!!! CTTTGTATTGTTTTGCTATT+TGG + chr3_1:59241360-59241379 Msa0365290:intron 25.0%
! AGGAAATTAACAACATGTAT+TGG - chr3_1:59241487-59241506 None:intergenic 25.0%
! CTACAAAATCATCAATAACT+AGG - chr3_1:59241507-59241526 None:intergenic 25.0%
! AAATTTAGCAGAAACAAGAT+TGG + chr3_1:59241528-59241547 Msa0365290:intron 25.0%
!! AATTATATTGCTTTGGATCA+CGG - chr3_1:59241694-59241713 None:intergenic 25.0%
! CATCTGTAATTATATTGCTT+TGG - chr3_1:59241701-59241720 None:intergenic 25.0%
! AAATATAGATCATGCAGTAA+AGG + chr3_1:59241743-59241762 Msa0365290:intron 25.0%
! AATATAGATCATGCAGTAAA+GGG + chr3_1:59241744-59241763 Msa0365290:intron 25.0%
! TAACCACATTAAAATTGGTA+AGG - chr3_1:59242520-59242539 None:intergenic 25.0%
! TGATCTAACCACATTAAAAT+TGG - chr3_1:59242525-59242544 None:intergenic 25.0%
!! CAATTCTAATTTTCTATCAC+GGG - chr3_1:59242705-59242724 None:intergenic 25.0%
!! CCAATTCTAATTTTCTATCA+CGG - chr3_1:59242706-59242725 None:intergenic 25.0%
! CGTGATAGAAAATTAGAATT+GGG + chr3_1:59242704-59242723 Msa0365290:CDS 25.0%
!!! GATGGATTATTAAGATATGA+AGG + chr3_1:59242779-59242798 Msa0365290:CDS 25.0%
AATAGAAAACCTTGTCAAAC+TGG + chr3_1:59237424-59237443 Msa0365290:CDS 30.0%
TTAATCAAACCAGTTTGACA+AGG - chr3_1:59237436-59237455 None:intergenic 30.0%
!! TTGTCAAACTGGTTTGATTA+AGG + chr3_1:59237435-59237454 Msa0365290:CDS 30.0%
TTCACATATGCTGTTGAAAA+AGG + chr3_1:59237541-59237560 Msa0365290:CDS 30.0%
! AAGCAAAAGCTTGATAATCT+CGG - chr3_1:59237791-59237810 None:intergenic 30.0%
GATGATTTCCTTAAACAAGT+AGG + chr3_1:59237946-59237965 Msa0365290:CDS 30.0%
AATGATATTTCCTTGGATCA+CGG - chr3_1:59238185-59238204 None:intergenic 30.0%
TTTGAATATGATGTAGGTGA+AGG - chr3_1:59238423-59238442 None:intergenic 30.0%
GGTGAATTTGAATATGATGT+AGG - chr3_1:59238429-59238448 None:intergenic 30.0%
CGATCCAATAACATTTGAAT+TGG - chr3_1:59238823-59238842 None:intergenic 30.0%
GCAATGAACTCAATAAAATG+AGG + chr3_1:59239012-59239031 Msa0365290:CDS 30.0%
!! ACGATCCAGATGTATTTTTA+AGG + chr3_1:59239102-59239121 Msa0365290:CDS 30.0%
TCATGCCTTAAAAATACATC+TGG - chr3_1:59239110-59239129 None:intergenic 30.0%
TACTACTAGGGTATAGTATA+TGG + chr3_1:59239446-59239465 Msa0365290:intron 30.0%
TGAACAACAAAGCAAGAAAA+TGG - chr3_1:59239474-59239493 None:intergenic 30.0%
TACATATGTTTGCAAGTGTT+AGG + chr3_1:59239667-59239686 Msa0365290:intron 30.0%
AGACAATGCAAGAATCTAAA+AGG - chr3_1:59239736-59239755 None:intergenic 30.0%
AGAATCATCAATGGTACATA+TGG - chr3_1:59239816-59239835 None:intergenic 30.0%
GGTCTTAGATTGTGTATATT+TGG + chr3_1:59240172-59240191 Msa0365290:intron 30.0%
!! GTTGGTAATATGTAAATGGT+CGG + chr3_1:59240236-59240255 Msa0365290:intron 30.0%
CTTGACTAGAATTAGAGTAA+TGG - chr3_1:59240284-59240303 None:intergenic 30.0%
CTCTTGTTCAAAAAGACATT+TGG + chr3_1:59240377-59240396 Msa0365290:intron 30.0%
TCATATTTCAGAGTTACTTG+AGG - chr3_1:59240517-59240536 None:intergenic 30.0%
AATATCAGCTCAAAACAGTT+AGG - chr3_1:59240568-59240587 None:intergenic 30.0%
!! AACTGTTTTGAGCTGATATT+TGG + chr3_1:59240568-59240587 Msa0365290:intron 30.0%
GTTTAGAAACTTGAGAAACA+AGG - chr3_1:59240732-59240751 None:intergenic 30.0%
TTTGAAAAGATCGCATCTTT+AGG - chr3_1:59240856-59240875 None:intergenic 30.0%
! AAGATTGCAATGTGTTTTCT+TGG + chr3_1:59240884-59240903 Msa0365290:CDS 30.0%
! AATTCAGAACACAGTTTTTC+AGG - chr3_1:59240924-59240943 None:intergenic 30.0%
! CTTGATAGGTCATTAAGTTT+TGG + chr3_1:59241058-59241077 Msa0365290:intron 30.0%
TGGTCGATAAAATTAACAAG+CGG + chr3_1:59241301-59241320 Msa0365290:intron 30.0%
TGATGTATACATTCAAAGTG+CGG + chr3_1:59241603-59241622 Msa0365290:intron 30.0%
ATATAGATCATGCAGTAAAG+GGG + chr3_1:59241745-59241764 Msa0365290:intron 30.0%
TATGATATCAATCTGTTGCT+CGG - chr3_1:59242203-59242222 None:intergenic 30.0%
AAATAGCCTTCAAGGTTAAT+AGG - chr3_1:59242419-59242438 None:intergenic 30.0%
! ATTAACCTTGAAGGCTATTT+TGG + chr3_1:59242419-59242438 Msa0365290:CDS 30.0%
!! TTAACCTTGAAGGCTATTTT+GGG + chr3_1:59242420-59242439 Msa0365290:CDS 30.0%
! AAGGATATATCTGAAGTTGT+TGG - chr3_1:59242493-59242512 None:intergenic 30.0%
TTAAAATTGGTAAGGTGAGA+AGG - chr3_1:59242512-59242531 None:intergenic 30.0%
!! TCACCTTACCAATTTTAATG+TGG + chr3_1:59242514-59242533 Msa0365290:CDS 30.0%
CCGTGATAGAAAATTAGAAT+TGG + chr3_1:59242703-59242722 Msa0365290:CDS 30.0%
!! TACATCAAATGTTGATGATC+AGG + chr3_1:59242757-59242776 Msa0365290:CDS 30.0%
TATGGTTAATGAACTTGTGA+AGG + chr3_1:59242802-59242821 Msa0365290:CDS 30.0%
GGTGTGTTGTCTTATATTCT+CGG + chr3_1:59237676-59237695 Msa0365290:CDS 35.0%
CCAGTTATCATTCACATCAA+TGG - chr3_1:59237836-59237855 None:intergenic 35.0%
CCATTGATGTGAATGATAAC+TGG + chr3_1:59237833-59237852 Msa0365290:CDS 35.0%
TCGGTATCTAGTAGTATCTT+CGG + chr3_1:59237874-59237893 Msa0365290:CDS 35.0%
ATACTACAACCCATACTAGA+AGG + chr3_1:59237910-59237929 Msa0365290:CDS 35.0%
! ACAAGTAGGTTTTCAATTGG+TGG + chr3_1:59237960-59237979 Msa0365290:CDS 35.0%
TAATCTTTCTTCTCAGTTCG+AGG - chr3_1:59238009-59238028 None:intergenic 35.0%
CTCATTGTTTATGTCAGGTA+GGG - chr3_1:59238046-59238065 None:intergenic 35.0%
TCTCATTGTTTATGTCAGGT+AGG - chr3_1:59238047-59238066 None:intergenic 35.0%
CAGGTGTAATGATATTTCCT+TGG - chr3_1:59238192-59238211 None:intergenic 35.0%
ATCCTGCTCAATATAGAACA+AGG + chr3_1:59238298-59238317 Msa0365290:CDS 35.0%
ATATAGAACAAGGCTTTGCA+AGG + chr3_1:59238308-59238327 Msa0365290:CDS 35.0%
!!! CTTTTTTGCTCACAAATCAG+AGG + chr3_1:59238359-59238378 Msa0365290:CDS 35.0%
!! GCAGTTTTCAATCTGTTTCT+CGG - chr3_1:59238606-59238625 None:intergenic 35.0%
! TTTTATTGAGTTCATTGCCG+CGG - chr3_1:59239010-59239029 None:intergenic 35.0%
!! AACAGCTTGTTACTACTACT+AGG + chr3_1:59239433-59239452 Msa0365290:intron 35.0%
!! ACAGCTTGTTACTACTACTA+GGG + chr3_1:59239434-59239453 Msa0365290:intron 35.0%
TACATAAATCACGGTTCTCT+TGG - chr3_1:59239520-59239539 None:intergenic 35.0%
CAGTCTCACTACATAAATCA+CGG - chr3_1:59239529-59239548 None:intergenic 35.0%
! TGTACCATTGATGATTCTTC+AGG + chr3_1:59239818-59239837 Msa0365290:intron 35.0%
! ATGATTCTTCAGGCTACTTT+CGG + chr3_1:59239828-59239847 Msa0365290:intron 35.0%
! TACAAGGGAAAATTTTGCCT+AGG + chr3_1:59240147-59240166 Msa0365290:intron 35.0%
! ACAAGGGAAAATTTTGCCTA+GGG + chr3_1:59240148-59240167 Msa0365290:intron 35.0%
AACAAGAGATATGTCGTATC+AGG - chr3_1:59240365-59240384 None:intergenic 35.0%
GTGACATAACTGCACAATAT+TGG + chr3_1:59240405-59240424 Msa0365290:intron 35.0%
AATCTTGAGCTCCTATCATA+AGG + chr3_1:59240443-59240462 Msa0365290:intron 35.0%
AAGCAAAGTTACTCTACATG+TGG - chr3_1:59240478-59240497 None:intergenic 35.0%
! TTTTGAGCTGATATTTGGCT+TGG + chr3_1:59240573-59240592 Msa0365290:intron 35.0%
TTAGAAGAAGAGCTGGTAAT+AGG + chr3_1:59240613-59240632 Msa0365290:intron 35.0%
AAACTTGAGAAACAAGGCAA+AGG - chr3_1:59240726-59240745 None:intergenic 35.0%
TCTAAACCTTCACCAGATTT+CGG + chr3_1:59240745-59240764 Msa0365290:intron 35.0%
AAGAAGAACTTACATGAGCA+AGG - chr3_1:59241003-59241022 None:intergenic 35.0%
ATTCATCAAGACTCTCAAGA+AGG - chr3_1:59241186-59241205 None:intergenic 35.0%
ATTGCGGTTATGTTCATGAT+TGG + chr3_1:59241627-59241646 Msa0365290:intron 35.0%
GATGAATGTCAATATGCACA+TGG + chr3_1:59241767-59241786 Msa0365290:intron 35.0%
ACTGTAGTACTAATCTGAGT+CGG - chr3_1:59242254-59242273 None:intergenic 35.0%
TGCTAGAGATAATACTCATC+TGG + chr3_1:59242319-59242338 Msa0365290:CDS 35.0%
GTGAATCCTATTAACCTTGA+AGG + chr3_1:59242410-59242429 Msa0365290:CDS 35.0%
!! TCAAATGTTGATGATCAGGA+TGG + chr3_1:59242761-59242780 Msa0365290:CDS 35.0%
GAATGCCATTACGTCATCTT+CGG - chr3_1:59237524-59237543 None:intergenic 40.0%
AAGTCGATGAGGTAGGATTA+TGG + chr3_1:59237572-59237591 Msa0365290:CDS 40.0%
GATGAGGTAGGATTATGGTA+TGG + chr3_1:59237577-59237596 Msa0365290:CDS 40.0%
AGGTAGGATTATGGTATGGA+AGG + chr3_1:59237581-59237600 Msa0365290:CDS 40.0%
TAGGATTATGGTATGGAAGG+AGG + chr3_1:59237584-59237603 Msa0365290:CDS 40.0%
AGGATTATGGTATGGAAGGA+GGG + chr3_1:59237585-59237604 Msa0365290:CDS 40.0%
AGGAAATGGGATATGAAGAG+AGG + chr3_1:59237617-59237636 Msa0365290:CDS 40.0%
AATAAGGCAGCAACCATAAG+AGG - chr3_1:59237646-59237665 None:intergenic 40.0%
! CTTATGGTTGCTGCCTTATT+TGG + chr3_1:59237646-59237665 Msa0365290:CDS 40.0%
AGAAACAGCACAATGAAGAG+CGG - chr3_1:59237749-59237768 None:intergenic 40.0%
CTAGTAGTATCTTCGGTTCA+AGG + chr3_1:59237881-59237900 Msa0365290:CDS 40.0%
GTATCTTCGGTTCAAGGAAT+AGG + chr3_1:59237887-59237906 Msa0365290:CDS 40.0%
TCATCTACGCCTTCTAGTAT+GGG - chr3_1:59237922-59237941 None:intergenic 40.0%
ATCATCTACGCCTTCTAGTA+TGG - chr3_1:59237923-59237942 None:intergenic 40.0%
TTGTTTATGTCAGGTAGGGA+TGG - chr3_1:59238042-59238061 None:intergenic 40.0%
!! TCAAAGTGAAGCCTTGTTCA+AGG + chr3_1:59238100-59238119 Msa0365290:CDS 40.0%
!! CAAAGTGAAGCCTTGTTCAA+GGG + chr3_1:59238101-59238120 Msa0365290:CDS 40.0%
TGAGAATAAGCCCTTGAACA+AGG - chr3_1:59238114-59238133 None:intergenic 40.0%
CAAGGGCTTATTCTCATGAT+TGG + chr3_1:59238118-59238137 Msa0365290:CDS 40.0%
GATGCTTGTGAATATGCACA+CGG + chr3_1:59238255-59238274 Msa0365290:CDS 40.0%
!! CACACGGTATTTTTGAATGC+TGG + chr3_1:59238271-59238290 Msa0365290:CDS 40.0%
!! AGCCTTGTTCTATATTGAGC+AGG - chr3_1:59238303-59238322 None:intergenic 40.0%
AGCAAAAAAGCAAACCCTTC+TGG - chr3_1:59238349-59238368 None:intergenic 40.0%
TTCACCTAGTGCTTCTTCAA+TGG + chr3_1:59238443-59238462 Msa0365290:CDS 40.0%
!! GAATCCATTGAAGAAGCACT+AGG - chr3_1:59238450-59238469 None:intergenic 40.0%
GCAGATTGTATCGAAGAAGA+CGG - chr3_1:59238489-59238508 None:intergenic 40.0%
TTGAAAACTGCACTGAATGC+TGG + chr3_1:59238615-59238634 Msa0365290:CDS 40.0%
GTCTTTCATCCCCTTCAAAT+AGG + chr3_1:59238676-59238695 Msa0365290:CDS 40.0%
TCTTGCAAGCCTATTTGAAG+GGG - chr3_1:59238688-59238707 None:intergenic 40.0%
CTCTTGCAAGCCTATTTGAA+GGG - chr3_1:59238689-59238708 None:intergenic 40.0%
ACTCTTGCAAGCCTATTTGA+AGG - chr3_1:59238690-59238709 None:intergenic 40.0%
TGATGCATCTGCATTGTGAT+CGG - chr3_1:59238759-59238778 None:intergenic 40.0%
CTTTATTGAGCGCAGTAGTA+TGG + chr3_1:59238884-59238903 Msa0365290:CDS 40.0%
AGAAATCGTAGAATGCTCCA+TGG - chr3_1:59238949-59238968 None:intergenic 40.0%
! ATGGAGCATTCTACGATTTC+TGG + chr3_1:59238948-59238967 Msa0365290:CDS 40.0%
!! AGCATTCTACGATTTCTGGT+TGG + chr3_1:59238952-59238971 Msa0365290:CDS 40.0%
!! GCATTCTACGATTTCTGGTT+GGG + chr3_1:59238953-59238972 Msa0365290:CDS 40.0%
!! CATTCTACGATTTCTGGTTG+GGG + chr3_1:59238954-59238973 Msa0365290:CDS 40.0%
! GACCAGTCTAATTTTCCATC+AGG - chr3_1:59238984-59239003 None:intergenic 40.0%
AAAATACATCTGGATCGTCG+TGG - chr3_1:59239100-59239119 None:intergenic 40.0%
TGTGAAAGATGCTCCAACAA+TGG + chr3_1:59239148-59239167 Msa0365290:CDS 40.0%
! TTTGCCAGAGCATTTGTACA+TGG + chr3_1:59239232-59239251 Msa0365290:intron 40.0%
CGTGATTTATGTAGTGAGAC+TGG + chr3_1:59239527-59239546 Msa0365290:intron 40.0%
TAGCATAATCTGATAGGTGC+TGG + chr3_1:59239768-59239787 Msa0365290:intron 40.0%
GTAGCCTGAAGAATCATCAA+TGG - chr3_1:59239825-59239844 None:intergenic 40.0%
AGTTGAGTTTATCGAGCACA+AGG + chr3_1:59239892-59239911 Msa0365290:intron 40.0%
ATCTGACTTAGAAGAAGAGC+TGG + chr3_1:59240606-59240625 Msa0365290:intron 40.0%
AAACAAGGCAAAGGAAGAAG+TGG - chr3_1:59240717-59240736 None:intergenic 40.0%
GAAACAGCACCAAAACTTGA+AGG - chr3_1:59240981-59241000 None:intergenic 40.0%
ATGCTTTCTCTTTCACTCTC+TGG + chr3_1:59241220-59241239 Msa0365290:CDS 40.0%
! CAGAAACAAGATTGGCTCAA+GGG + chr3_1:59241536-59241555 Msa0365290:intron 40.0%
AAATGTCCCTTTGCTCATCA+TGG + chr3_1:59241653-59241672 Msa0365290:intron 40.0%
AATGTCCCTTTGCTCATCAT+GGG + chr3_1:59241654-59241673 Msa0365290:intron 40.0%
AACTGGTACTAGCATTCAAC+GGG - chr3_1:59242004-59242023 None:intergenic 40.0%
GAACTGGTACTAGCATTCAA+CGG - chr3_1:59242005-59242024 None:intergenic 40.0%
!! GTATACATTGCAGAAGCACT+TGG - chr3_1:59242062-59242081 None:intergenic 40.0%
GCAGGATATGATATTGCAGA+CGG - chr3_1:59242119-59242138 None:intergenic 40.0%
TCTGCAATATCATATCCTGC+AGG + chr3_1:59242119-59242138 Msa0365290:CDS 40.0%
ACTGTAGTACGATTCTGAGT+CGG - chr3_1:59242164-59242183 None:intergenic 40.0%
GCAGTATTCAATCTGTTGCT+CGG - chr3_1:59242293-59242312 None:intergenic 40.0%
ATGCCGAATCCAATGATAGA+AGG + chr3_1:59242368-59242387 Msa0365290:CDS 40.0%
TGCCGAATCCAATGATAGAA+GGG + chr3_1:59242369-59242388 Msa0365290:CDS 40.0%
GACCCTTCTATCATTGGATT+CGG - chr3_1:59242374-59242393 None:intergenic 40.0%
CTACTTGACCCTTCTATCAT+TGG - chr3_1:59242380-59242399 None:intergenic 40.0%
CAATGATAGAAGGGTCAAGT+AGG + chr3_1:59242378-59242397 Msa0365290:CDS 40.0%
ATGACCCAAAATAGCCTTCA+AGG - chr3_1:59242427-59242446 None:intergenic 40.0%
TGGTTAGATCACAACAGTTC+AGG + chr3_1:59242534-59242553 Msa0365290:CDS 40.0%
GGTTAGATCACAACAGTTCA+GGG + chr3_1:59242535-59242554 Msa0365290:CDS 40.0%
GTTAGATCACAACAGTTCAG+GGG + chr3_1:59242536-59242555 Msa0365290:CDS 40.0%
AATGCAACTGAGGTAGAATC+TGG - chr3_1:59242650-59242669 None:intergenic 40.0%
AGATTCTACCTCAGTTGCAT+TGG + chr3_1:59242649-59242668 Msa0365290:CDS 40.0%
CACTAGCAACACTTCAACAA+TGG + chr3_1:59242730-59242749 Msa0365290:CDS 40.0%
TTCAGCCGAAGATGACGTAA+TGG + chr3_1:59237516-59237535 Msa0365290:CDS 45.0%
GAACATGAAGTCGATGAGGT+AGG + chr3_1:59237565-59237584 Msa0365290:CDS 45.0%
TTATGGTATGGAAGGAGGGT+TGG + chr3_1:59237589-59237608 Msa0365290:CDS 45.0%
AGGGTTGGATCGAAGGAAAT+GGG + chr3_1:59237604-59237623 Msa0365290:CDS 45.0%
TGAAGAGAGGACACCTCTTA+TGG + chr3_1:59237630-59237649 Msa0365290:CDS 45.0%
!! TGCTGCCTTATTTGGAAGCA+AGG + chr3_1:59237654-59237673 Msa0365290:CDS 45.0%
!! GCTGCCTTATTTGGAAGCAA+GGG + chr3_1:59237655-59237674 Msa0365290:CDS 45.0%
CACACCCTTGCTTCCAAATA+AGG - chr3_1:59237662-59237681 None:intergenic 45.0%
GTTGATGTTAACCGAGAGTG+CGG + chr3_1:59237709-59237728 Msa0365290:CDS 45.0%
!! GCTCTTCATTGTGCTGTTTC+TGG + chr3_1:59237748-59237767 Msa0365290:CDS 45.0%
! GTGCAACGACTTGTTTGTCT+CGG + chr3_1:59237855-59237874 Msa0365290:CDS 45.0%
TCAGGTAGGGATGGATCAAT+CGG - chr3_1:59238033-59238052 None:intergenic 45.0%
ATGATCCTTTCCGAAACTCG+GGG - chr3_1:59238224-59238243 None:intergenic 45.0%
CATGATCCTTTCCGAAACTC+GGG - chr3_1:59238225-59238244 None:intergenic 45.0%
GCATGATCCTTTCCGAAACT+CGG - chr3_1:59238226-59238245 None:intergenic 45.0%
AGAACAAGGCTTTGCAAGGA+TGG + chr3_1:59238312-59238331 Msa0365290:CDS 45.0%
! GAACCGGTAGAAGCATACAA+CGG - chr3_1:59238393-59238412 None:intergenic 45.0%
! TCTGTTTCTCGGCATCTGAA+GGG - chr3_1:59238595-59238614 None:intergenic 45.0%
! ATCTGTTTCTCGGCATCTGA+AGG - chr3_1:59238596-59238615 None:intergenic 45.0%
TTGAAGGGGATGAAAGACTG+AGG - chr3_1:59238674-59238693 None:intergenic 45.0%
AGAACGCAAACCAGCAACTT+TGG + chr3_1:59238778-59238797 Msa0365290:CDS 45.0%
GAACGCAAACCAGCAACTTT+GGG + chr3_1:59238779-59238798 Msa0365290:CDS 45.0%
AACGCAAACCAGCAACTTTG+GGG + chr3_1:59238780-59238799 Msa0365290:CDS 45.0%
AATGATAGCCCCAAAGTTGC+TGG - chr3_1:59238791-59238810 None:intergenic 45.0%
ATTGGATCGCCACAATTCAG+AGG + chr3_1:59238834-59238853 Msa0365290:CDS 45.0%
! AAGGCATCTCCTCTGAATTG+TGG - chr3_1:59238846-59238865 None:intergenic 45.0%
!! GCTCTGGCTTTGATTTGAGA+AGG - chr3_1:59238865-59238884 None:intergenic 45.0%
TACTGCGCTCAATAAAGCTC+TGG - chr3_1:59238881-59238900 None:intergenic 45.0%
CGCCTGATGGAAAATTAGAC+TGG + chr3_1:59238979-59238998 Msa0365290:CDS 45.0%
! AAATTAGACTGGTCCATCCG+CGG + chr3_1:59238990-59239009 Msa0365290:CDS 45.0%
TGCTCCATGTACAAATGCTC+TGG - chr3_1:59239239-59239258 None:intergenic 45.0%
! GTACATGGAGCATTAGCAGA+TGG + chr3_1:59239247-59239266 Msa0365290:intron 45.0%
TAAATGAAGACGCTAGAGCG+CGG - chr3_1:59239309-59239328 None:intergenic 45.0%
TGTTAGGACATGTGTGACAC+TGG + chr3_1:59239683-59239702 Msa0365290:intron 45.0%
! AGGGAAAATTTTGCCTAGGG+AGG + chr3_1:59240151-59240170 Msa0365290:intron 45.0%
! ACACAATCTAAGACCTCCCT+AGG - chr3_1:59240167-59240186 None:intergenic 45.0%
GGTGCAGCTTACCTTATGAT+AGG - chr3_1:59240457-59240476 None:intergenic 45.0%
! GCAGAAACAAGATTGGCTCA+AGG + chr3_1:59241535-59241554 Msa0365290:intron 45.0%
!!! CAAGGGAGCAGGTTTTGAAA+TGG + chr3_1:59241553-59241572 Msa0365290:CDS 45.0%
ACATTCAAAGTGCGGCATTG+CGG + chr3_1:59241611-59241630 Msa0365290:intron 45.0%
ATGTCCCTTTGCTCATCATG+GGG + chr3_1:59241655-59241674 Msa0365290:intron 45.0%
CTTTCCCCATGATGAGCAAA+GGG - chr3_1:59241662-59241681 None:intergenic 45.0%
!! AGCGTTGTTCTGTATCGACT+AGG - chr3_1:59241815-59241834 None:intergenic 45.0%
CTTCTTTGCTCACAAACCTG+AGG + chr3_1:59241971-59241990 Msa0365290:CDS 45.0%
ATGTGAAGGCAAAGCAGAAC+TGG - chr3_1:59242021-59242040 None:intergenic 45.0%
ATCCTGCAGAAAGAACCATG+TGG + chr3_1:59242222-59242241 Msa0365290:CDS 45.0%
GTACTAATCTGAGTCGGAGT+CGG - chr3_1:59242248-59242267 None:intergenic 45.0%
CAAGATATGATGCCCTTTCG+AGG + chr3_1:59242576-59242595 Msa0365290:CDS 45.0%
TGCTGCTCTCGATAAAGTTC+TGG - chr3_1:59242607-59242626 None:intergenic 45.0%
TGAGGTAGAATCTGGAAGCT+TGG - chr3_1:59242642-59242661 None:intergenic 45.0%
!! TATAATATTAATTATAACAT+TGG + chr3_1:59239278-59239297 Msa0365290:intron 5.0%
AGGCGAACATGAAGTCGATG+AGG + chr3_1:59237561-59237580 Msa0365290:CDS 50.0%
GAGGGTTGGATCGAAGGAAA+TGG + chr3_1:59237603-59237622 Msa0365290:CDS 50.0%
TCGGTTAACATCAACGCGAC+TGG - chr3_1:59237704-59237723 None:intergenic 50.0%
CGGGTGAACAAATGGACACT+CGG - chr3_1:59238145-59238164 None:intergenic 50.0%
CGAGTGTCCATTTGTTCACC+CGG + chr3_1:59238143-59238162 Msa0365290:CDS 50.0%
GAGTGTCCATTTGTTCACCC+GGG + chr3_1:59238144-59238163 Msa0365290:CDS 50.0%
AGTGTCCATTTGTTCACCCG+GGG + chr3_1:59238145-59238164 Msa0365290:CDS 50.0%
! TTTTCCCCCGGGTGAACAAA+TGG - chr3_1:59238153-59238172 None:intergenic 50.0%
CGGAAAGGATCATGCAGCAA+AGG + chr3_1:59238231-59238250 Msa0365290:CDS 50.0%
AGGCTTTGCAAGGATGGAAC+CGG + chr3_1:59238318-59238337 Msa0365290:CDS 50.0%
CGACCGTTGTATGCTTCTAC+CGG + chr3_1:59238387-59238406 Msa0365290:CDS 50.0%
AGGTGAAGGCAAAGCAGAAC+CGG - chr3_1:59238409-59238428 None:intergenic 50.0%
ACTCCATCTTCACCTGCTAC+TGG + chr3_1:59238525-59238544 Msa0365290:CDS 50.0%
GTTCCAGTAGCAGGTGAAGA+TGG - chr3_1:59238531-59238550 None:intergenic 50.0%
TTCTCGGCATCTGAAGGGTT+GGG - chr3_1:59238590-59238609 None:intergenic 50.0%
TTTCTCGGCATCTGAAGGGT+TGG - chr3_1:59238591-59238610 None:intergenic 50.0%
ATGGCAACTGAGGTAGCAGA+AGG - chr3_1:59238930-59238949 None:intergenic 50.0%
TTCTGCTACCTCAGTTGCCA+TGG + chr3_1:59238929-59238948 Msa0365290:CDS 50.0%
AGAATGCTCCATGGCAACTG+AGG - chr3_1:59238940-59238959 None:intergenic 50.0%
ATTGAGTTCATTGCCGCGGA+TGG - chr3_1:59239006-59239025 None:intergenic 50.0%
! CATGGAGCATTAGCAGATGG+TGG + chr3_1:59239250-59239269 Msa0365290:intron 50.0%
AAGGAACCTGCACCGAAATC+TGG - chr3_1:59240760-59240779 None:intergenic 50.0%
GCTTTCCCCATGATGAGCAA+AGG - chr3_1:59241663-59241682 None:intergenic 50.0%
GCACATGGTGTTCTTGAGTC+CGG + chr3_1:59241782-59241801 Msa0365290:intron 50.0%
CACATGGTGTTCTTGAGTCC+GGG + chr3_1:59241783-59241802 Msa0365290:intron 50.0%
GATATTGCAGACGGTGTCCA+AGG - chr3_1:59242110-59242129 None:intergenic 50.0%
ATCCTGCAGGAAGAACCATG+TGG + chr3_1:59242132-59242151 Msa0365290:CDS 50.0%
GTACGATTCTGAGTCGGAGT+CGG - chr3_1:59242158-59242177 None:intergenic 50.0%
AATCTGTTGCTCGGCATCTG+AGG - chr3_1:59242194-59242213 None:intergenic 50.0%
AATCTGTTGCTCGGCATCTG+AGG - chr3_1:59242194-59242213 None:intergenic 50.0%
ACAATCTCCGACAGCAATGC+AGG + chr3_1:59242451-59242470 Msa0365290:CDS 50.0%
CAATCTCCGACAGCAATGCA+GGG + chr3_1:59242452-59242471 Msa0365290:CDS 50.0%
AATCTCCGACAGCAATGCAG+GGG + chr3_1:59242453-59242472 Msa0365290:CDS 50.0%
TGATACCCCTGCATTGCTGT+CGG - chr3_1:59242461-59242480 None:intergenic 50.0%
CTTTATCGAGAGCAGCAGCA+TGG + chr3_1:59242610-59242629 Msa0365290:CDS 50.0%
TGAAGGCTCCAATGCAACTG+AGG - chr3_1:59242660-59242679 None:intergenic 50.0%
TGGAAGGAGGGTTGGATCGA+AGG + chr3_1:59237597-59237616 Msa0365290:CDS 55.0%
GTGGAGCAGCAACACGATGT+AGG + chr3_1:59237979-59237998 Msa0365290:CDS 55.0%
GTGTCCATTTGTTCACCCGG+GGG + chr3_1:59238146-59238165 Msa0365290:CDS 55.0%
CTTTCCGAAACTCGGGGCAA+GGG - chr3_1:59238218-59238237 None:intergenic 55.0%
ATGGAACCGGATGCACCAGA+AGG + chr3_1:59238331-59238350 Msa0365290:CDS 55.0%
TGGAACCGGATGCACCAGAA+GGG + chr3_1:59238332-59238351 Msa0365290:CDS 55.0%
GCAAACCCTTCTGGTGCATC+CGG - chr3_1:59238340-59238359 None:intergenic 55.0%
GGTGAAGATGGAGTCGAAGG+TGG - chr3_1:59238519-59238538 None:intergenic 55.0%
GCAGGTGAAGATGGAGTCGA+AGG - chr3_1:59238522-59238541 None:intergenic 55.0%
CACCTGCTACTGGAACCATG+TGG + chr3_1:59238535-59238554 Msa0365290:CDS 55.0%
TGCCACATGGTTCCAGTAGC+AGG - chr3_1:59238540-59238559 None:intergenic 55.0%
TGCTACTGGAACCATGTGGC+AGG + chr3_1:59238539-59238558 Msa0365290:CDS 55.0%
CTGAATCTGAGCCTGCCACA+TGG - chr3_1:59238553-59238572 None:intergenic 55.0%
ACAGAACCGCGTCGGGATTA+TGG - chr3_1:59239211-59239230 None:intergenic 55.0%
TGGCAAAGACAGAACCGCGT+CGG - chr3_1:59239219-59239238 None:intergenic 55.0%
AGGTGACTAGTGCAGCAGCT+TGG + chr3_1:59240633-59240652 Msa0365290:intron 55.0%
TGACTAGTGCAGCAGCTTGG+TGG + chr3_1:59240636-59240655 Msa0365290:intron 55.0%
GACTAGTGCAGCAGCTTGGT+GGG + chr3_1:59240637-59240656 Msa0365290:intron 55.0%
CCTGCACCGAAATCTGGTGA+AGG - chr3_1:59240754-59240773 None:intergenic 55.0%
! CCTTCACCAGATTTCGGTGC+AGG + chr3_1:59240751-59240770 Msa0365290:intron 55.0%
! CAAGATTGGCTCAAGGGAGC+AGG + chr3_1:59241542-59241561 Msa0365290:CDS 55.0%
!! GTATCGACTAGGATGCAGCC+CGG - chr3_1:59241804-59241823 None:intergenic 55.0%
TTCAACGGGCGAAGTTCCTC+AGG - chr3_1:59241990-59242009 None:intergenic 55.0%
ATTGCAGACGGTGTCCAAGG+CGG - chr3_1:59242107-59242126 None:intergenic 55.0%
! TGCTCGGCATCTGAGGTGTA+GGG - chr3_1:59242187-59242206 None:intergenic 55.0%
! TTGCTCGGCATCTGAGGTGT+AGG - chr3_1:59242188-59242207 None:intergenic 55.0%
GGCCACATGGTTCTTTCTGC+AGG - chr3_1:59242227-59242246 None:intergenic 55.0%
! TGCTCGGCATCTGAGGTGTA+GGG - chr3_1:59242187-59242206 None:intergenic 55.0%
! TTGCTCGGCATCTGAGGTGT+AGG - chr3_1:59242188-59242207 None:intergenic 55.0%
GAAGGGTCAAGTAGGCTTGC+TGG + chr3_1:59242386-59242405 Msa0365290:CDS 55.0%
!! GTTCTGGCTCTGCCTCGAAA+GGG - chr3_1:59242591-59242610 None:intergenic 55.0%
!! AGTTCTGGCTCTGCCTCGAA+AGG - chr3_1:59242592-59242611 None:intergenic 55.0%
GAGCCTTCAACTGCCTTCTC+CGG + chr3_1:59242671-59242690 Msa0365290:CDS 55.0%
CAACCGGAGAAGGCAGTTGA+AGG - chr3_1:59242677-59242696 None:intergenic 55.0%
CTTCAACTGCCTTCTCCGGT+TGG + chr3_1:59242675-59242694 Msa0365290:CDS 55.0%
! ACCGAGAGTGCGGCTCAGAT+AGG + chr3_1:59237719-59237738 Msa0365290:CDS 60.0%
CCCTATCTGAGCCGCACTCT+CGG - chr3_1:59237723-59237742 None:intergenic 60.0%
! CCGAGAGTGCGGCTCAGATA+GGG + chr3_1:59237720-59237739 Msa0365290:CDS 60.0%
TTCACCCGGGGGAAAACGCA+AGG + chr3_1:59238157-59238176 Msa0365290:CDS 60.0%
AAACTCGGGGCAAGGGACAC+AGG - chr3_1:59238211-59238230 None:intergenic 60.0%
GTGTCCCTTGCCCCGAGTTT+CGG + chr3_1:59238211-59238230 Msa0365290:CDS 60.0%
CCTTTCCGAAACTCGGGGCA+AGG - chr3_1:59238219-59238238 None:intergenic 60.0%
CCTTGCCCCGAGTTTCGGAA+AGG + chr3_1:59238216-59238235 Msa0365290:CDS 60.0%
GATGGAGTCGAAGGTGGCGT+TGG - chr3_1:59238513-59238532 None:intergenic 60.0%
GCAGTGCCATAATCCCGACG+CGG + chr3_1:59239202-59239221 Msa0365290:CDS 60.0%
GGCAAAGACAGAACCGCGTC+GGG - chr3_1:59239218-59239237 None:intergenic 60.0%
ATGAAGACGCTAGAGCGCGG+AGG - chr3_1:59239306-59239325 None:intergenic 60.0%
TGCCTTCATCGATGCCGCCT+TGG + chr3_1:59242090-59242109 Msa0365290:CDS 60.0%
!! GTCCAAGGCGGCATCGATGA+AGG - chr3_1:59242095-59242114 None:intergenic 60.0%
GGCCACATGGTTCTTCCTGC+AGG - chr3_1:59242137-59242156 None:intergenic 60.0%
!! TCTATCACGGGAGCGCCAAC+CGG - chr3_1:59242693-59242712 None:intergenic 60.0%
!! ACGCAAGGCGCCGTGATCCA+AGG + chr3_1:59238172-59238191 Msa0365290:CDS 65.0%
TCTGGTTGGGGCTCGCCTGA+TGG + chr3_1:59238966-59238985 Msa0365290:CDS 65.0%
CTGAGTCGGAGTCGGCCACA+TGG - chr3_1:59242150-59242169 None:intergenic 65.0%
CTGAGTCGGAGTCGGCCACA+TGG - chr3_1:59242150-59242169 None:intergenic 65.0%
! GGCGCCTTGCGTTTTCCCCC+GGG - chr3_1:59238164-59238183 None:intergenic 70.0%
! CGGCGCCTTGCGTTTTCCCC+CGG - chr3_1:59238165-59238184 None:intergenic 70.0%
!! ACGGGAGCGCCAACCGGAGA+AGG - chr3_1:59242687-59242706 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 59237409 59242844 59237409 ID=Msa0365290;Name=Msa0365290
chr3_1 mRNA 59237409 59242844 59237409 ID=Msa0365290-mRNA-1;Parent=Msa0365290;Name=Msa0365290-mRNA-1;_AED=0.34;_eAED=0.35;_QI=0|0|0|1|0|0.2|5|0|1014
chr3_1 exon 59237409 59239246 59237409 ID=Msa0365290-mRNA-1:exon:11305;Parent=Msa0365290-mRNA-1
chr3_1 exon 59240860 59241009 59240860 ID=Msa0365290-mRNA-1:exon:11306;Parent=Msa0365290-mRNA-1
chr3_1 exon 59241193 59241298 59241193 ID=Msa0365290-mRNA-1:exon:11307;Parent=Msa0365290-mRNA-1
chr3_1 exon 59241539 59241606 59241539 ID=Msa0365290-mRNA-1:exon:11308;Parent=Msa0365290-mRNA-1
chr3_1 exon 59241962 59242844 59241962 ID=Msa0365290-mRNA-1:exon:11309;Parent=Msa0365290-mRNA-1
chr3_1 CDS 59237409 59239246 59237409 ID=Msa0365290-mRNA-1:cds;Parent=Msa0365290-mRNA-1
chr3_1 CDS 59240860 59241009 59240860 ID=Msa0365290-mRNA-1:cds;Parent=Msa0365290-mRNA-1
chr3_1 CDS 59241193 59241298 59241193 ID=Msa0365290-mRNA-1:cds;Parent=Msa0365290-mRNA-1
chr3_1 CDS 59241539 59241606 59241539 ID=Msa0365290-mRNA-1:cds;Parent=Msa0365290-mRNA-1
chr3_1 CDS 59241962 59242844 59241962 ID=Msa0365290-mRNA-1:cds;Parent=Msa0365290-mRNA-1
Gene Sequence

>Msa0365290

ATGTGCAACGGTGCGAATAGAAAACCTTGTCAAACTGGTTTGATTAAGGAAAATGAATATGGAAGACAAGAAGAACTTCATCATAAGATTTCAGCTTTGCTTAAGTTTTCAGCCGAAGATGACGTAATGGCATTCACATATGCTGTTGAAAAAGGCGAACATGAAGTCGATGAGGTAGGATTATGGTATGGAAGGAGGGTTGGATCGAAGGAAATGGGATATGAAGAGAGGACACCTCTTATGGTTGCTGCCTTATTTGGAAGCAAGGGTGTGTTGTCTTATATTCTCGGAACCAGTCGCGTTGATGTTAACCGAGAGTGCGGCTCAGATAGGGCTACCGCTCTTCATTGTGCTGTTTCTGGATGTTCTGCTGCTTCTGCCGAGATTATCAAGCTTTTGCTTGATGCATCTGCAGATGTTAGTTCCATTGATGTGAATGATAACTGGTGCAACGACTTGTTTGTCTCGGTATCTAGTAGTATCTTCGGTTCAAGGAATAGGATACTACAACCCATACTAGAAGGCGTAGATGATGTTGATGATTTCCTTAAACAAGTAGGTTTTCAATTGGTGGAGCAGCAACACGATGTAGGTACACCTCGAACTGAGAAGAAAGATTATCCGATTGATCCATCCCTACCTGACATAAACAATGAGATATATAGTACAGATGAATTTAGAATGTTTACATTCAAAGTGAAGCCTTGTTCAAGGGCTTATTCTCATGATTGGACCGAGTGTCCATTTGTTCACCCGGGGGAAAACGCAAGGCGCCGTGATCCAAGGAAATATCATTACACCTGTGTCCCTTGCCCCGAGTTTCGGAAAGGATCATGCAGCAAAGGAGATGCTTGTGAATATGCACACGGTATTTTTGAATGCTGGCTTCATCCTGCTCAATATAGAACAAGGCTTTGCAAGGATGGAACCGGATGCACCAGAAGGGTTTGCTTTTTTGCTCACAAATCAGAGGAGCTTCGACCGTTGTATGCTTCTACCGGTTCTGCTTTGCCTTCACCTACATCATATTCAAATTCACCTAGTGCTTCTTCAATGGATTCTTTCACATTGAGTTCTCCGTCTTCTTCGATACAATCTGCACCAACGCCACCTTCGACTCCATCTTCACCTGCTACTGGAACCATGTGGCAGGCTCAGATTCAGCTTCATGCTGCAGTCCCAACCCTTCAGATGCCGAGAAACAGATTGAAAACTGCACTGAATGCTGGAAATAACGTTGAATTTCTCGAACTTGAGAATTGCCTCAGTCTTTCATCCCCTTCAAATAGGCTTGCAAGAGTGAATCCTACTAACTTTAAAAACTTTTTCGGGTCATCGATACAATCTCCGATCACAATGCAGATGCATCAGAACGCAAACCAGCAACTTTGGGGCTATCATTCTGATCTTACCAATTCAAATGTTATTGGATCGCCACAATTCAGAGGAGATGCCTTCTCAAATCAAAGCCAGAGCTTTATTGAGCGCAGTAGTATGGCGAGCTTTAGTTCTGATCTTCCTTCTGCTACCTCAGTTGCCATGGAGCATTCTACGATTTCTGGTTGGGGCTCGCCTGATGGAAAATTAGACTGGTCCATCCGCGGCAATGAACTCAATAAAATGAGGAAATCTTATTCTTTCGGCTTTCGAAACAGAAGTAGCACTTCATCAATAGCTTCAGCATTAAACCACGACGATCCAGATGTATTTTTAAGGCATGAATCTTGGGTTAATTCTCTTGTGAAAGATGCTCCAACAATGGAATTTGATCAATATTGTGTTGAAGATCAACTGCAGTGCCATAATCCCGACGCGGTTCTGTCTTTGCCAGAGCATTTATGCGATCTTTTCAAAAATTATACAAGATTGCAATGTGTTTTCTTGGTTGCTAAGAAAATTCCTGAAAAACTGTGTTCTGAATTATTTGTATTTGTCTTATTAAGAGTATTTCTAAAACCTTCAAGTTTTGGTGCTGTTTCCTTGCTCATAGTCTTGATGAATGTGTATGAAAAAGTATGCTTTCTCTTTCACTCTCTGGAAGAAGATACACAAAATAACCATTGTTGTGTTCTTAATCTAACAATATTAAATGCAAAACAAGATTGGCTCAAGGGAGCAGGTTTTGAAATGGAGAAGCAGCAACAAGATGATGAATTTATGATAGAAGTTTGCTTCTTTGCTCACAAACCTGAGGAACTTCGCCCGTTGAATGCTAGTACCAGTTCTGCTTTGCCTTCACATACATTATATTCAAATTCACCAAGTGCTTCTGCAATGTATACTTTCACATTGCCTTCATCGATGCCGCCTTGGACACCGTCTGCAATATCATATCCTGCAGGAAGAACCATGTGGCCGACTCCGACTCAGAATCGTACTACAGTCCCTACACCTCAGATGCCGAGCAACAGATTGATATCATATCCTGCAGAAAGAACCATGTGGCCGACTCCGACTCAGATTAGTACTACAGTCCCTACACCTCAGATGCCGAGCAACAGATTGAATACTGCATTGAATGCTAGAGATAATACTCATCTGGACATGAAATTTTTCGAATATCACAATATGCCGAATCCAATGATAGAAGGGTCAAGTAGGCTTGCTGGAGTGAATCCTATTAACCTTGAAGGCTATTTTGGGTCATCGATACAATCTCCGACAGCAATGCAGGGGTATCAGAATGTGAACCAACAACTTCAGATATATCCTTCTCACCTTACCAATTTTAATGTGGTTAGATCACAACAGTTCAGGGGTGATCCATTTTTTAATTCAAGATATGATGCCCTTTCGAGGCAGAGCCAGAACTTTATCGAGAGCAGCAGCATGGCAAGCTCCAAGCTTCCAGATTCTACCTCAGTTGCATTGGAGCCTTCAACTGCCTTCTCCGGTTGGCGCTCCCGTGATAGAAAATTAGAATTGGGTGACACTAGCAACACTTCAACAATGGCTGCTACATCAAATGTTGATGATCAGGATGGATTATTAAGATATGAAGGTATGGTTAATGAACTTGTGAAGGAAGACGATCCAACATTGTAA
Protein sequence

>Msa0365290

MCNGANRKPCQTGLIKENEYGRQEELHHKISALLKFSAEDDVMAFTYAVEKGEHEVDEVGLWYGRRVGSKEMGYEERTPLMVAALFGSKGVLSYILGTSRVDVNRECGSDRATALHCAVSGCSAASAEIIKLLLDASADVSSIDVNDNWCNDLFVSVSSSIFGSRNRILQPILEGVDDVDDFLKQVGFQLVEQQHDVGTPRTEKKDYPIDPSLPDINNEIYSTDEFRMFTFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYTCVPCPEFRKGSCSKGDACEYAHGIFECWLHPAQYRTRLCKDGTGCTRRVCFFAHKSEELRPLYASTGSALPSPTSYSNSPSASSMDSFTLSSPSSSIQSAPTPPSTPSSPATGTMWQAQIQLHAAVPTLQMPRNRLKTALNAGNNVEFLELENCLSLSSPSNRLARVNPTNFKNFFGSSIQSPITMQMHQNANQQLWGYHSDLTNSNVIGSPQFRGDAFSNQSQSFIERSSMASFSSDLPSATSVAMEHSTISGWGSPDGKLDWSIRGNELNKMRKSYSFGFRNRSSTSSIASALNHDDPDVFLRHESWVNSLVKDAPTMEFDQYCVEDQLQCHNPDAVLSLPEHLCDLFKNYTRLQCVFLVAKKIPEKLCSELFVFVLLRVFLKPSSFGAVSLLIVLMNVYEKVCFLFHSLEEDTQNNHCCVLNLTILNAKQDWLKGAGFEMEKQQQDDEFMIEVCFFAHKPEELRPLNASTSSALPSHTLYSNSPSASAMYTFTLPSSMPPWTPSAISYPAGRTMWPTPTQNRTTVPTPQMPSNRLISYPAERTMWPTPTQISTTVPTPQMPSNRLNTALNARDNTHLDMKFFEYHNMPNPMIEGSSRLAGVNPINLEGYFGSSIQSPTAMQGYQNVNQQLQIYPSHLTNFNVVRSQQFRGDPFFNSRYDALSRQSQNFIESSSMASSKLPDSTSVALEPSTAFSGWRSRDRKLELGDTSNTSTMAATSNVDDQDGLLRYEGMVNELVKEDDPTL*