AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0366700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0366700 MtrunA17_Chr3g0107701 95.499 911 27 2 1 897 1 911 0.0 1792
Msa0366700 MtrunA17_Chr5g0432721 55.139 827 314 13 1 819 1 778 0.0 830
Msa0366700 MtrunA17_Chr4g0012861 48.610 899 423 14 16 895 19 897 0.0 800
Msa0366700 MtrunA17_Chr2g0281191 43.405 834 378 19 17 815 43 817 0.0 586
Msa0366700 MtrunA17_Chr7g0244871 60.215 93 37 0 318 410 5 97 2.19e-34 127
Msa0366700 MtrunA17_Chr7g0251891 47.059 85 44 1 325 408 16 100 2.23e-19 87.4
Msa0366700 MtrunA17_Chr7g0237841 37.255 102 62 2 325 424 623 724 4.80e-16 82.8
Msa0366700 MtrunA17_Chr1g0178071 36.364 165 80 9 306 456 54 207 5.85e-14 74.3
Msa0366700 MtrunA17_Chr7g0276471 40.659 91 49 3 325 412 117 205 5.31e-13 72.4
Msa0366700 MtrunA17_Chr5g0422501 36.667 120 60 5 325 430 235 352 1.70e-12 70.5
Msa0366700 MtrunA17_Chr8g0345771 38.462 91 51 3 325 412 171 259 2.26e-12 70.5
Msa0366700 MtrunA17_Chr7g0266821 35.338 133 79 5 330 458 65 194 4.96e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0366700 AT2G30470.1 48.678 832 328 21 1 823 6 747 0.0 687
Msa0366700 AT4G32010.2 49.256 739 280 17 15 748 20 668 0.0 660
Msa0366700 AT4G32010.1 48.991 743 280 18 15 748 20 672 0.0 656
Msa0366700 AT4G21550.3 40.000 290 116 7 294 580 294 528 2.39e-54 198
Msa0366700 AT4G21550.3 46.575 73 39 0 17 89 31 103 6.10e-17 85.9
Msa0366700 AT4G21550.2 39.051 274 110 6 294 565 294 512 1.00e-49 184
Msa0366700 AT4G21550.2 46.575 73 39 0 17 89 31 103 3.25e-17 86.3
Msa0366700 AT4G21550.1 39.934 303 125 8 294 594 294 541 2.71e-49 187
Msa0366700 AT4G21550.1 46.575 73 39 0 17 89 31 103 2.76e-17 87.4
Msa0366700 AT4G21550.1 45.455 99 51 2 696 791 550 648 1.43e-11 68.9
Msa0366700 AT3G26790.1 42.308 104 59 1 325 427 91 194 4.18e-20 92.8
Msa0366700 AT3G24650.1 39.216 102 60 2 325 424 571 672 4.51e-16 83.6
Msa0366700 AT1G13260.1 39.091 110 60 4 325 429 187 294 1.66e-14 76.6
Msa0366700 AT2G36080.4 39.815 108 56 4 325 425 37 142 2.80e-14 72.4
Msa0366700 AT2G36080.2 39.815 108 56 4 325 425 37 142 2.80e-14 72.4
Msa0366700 AT1G28300.1 43.023 86 48 1 325 409 170 255 2.92e-14 75.9
Msa0366700 AT2G36080.3 39.815 108 56 4 325 425 37 142 5.36e-14 73.2
Msa0366700 AT2G36080.1 39.815 108 56 4 325 425 37 142 5.84e-14 73.2
Msa0366700 AT1G68840.2 41.935 93 47 3 325 412 187 277 1.37e-13 73.9
Msa0366700 AT1G68840.1 41.935 93 47 3 325 412 187 277 1.37e-13 73.9
Msa0366700 AT4G01500.1 41.573 89 49 2 325 412 35 121 1.68e-13 73.2
Msa0366700 AT5G06250.5 31.707 164 89 6 314 459 37 195 7.55e-13 70.1
Msa0366700 AT5G06250.4 31.707 164 89 6 314 459 37 195 7.57e-13 70.5
Msa0366700 AT5G06250.2 31.707 164 89 6 314 459 37 195 7.66e-13 70.5
Msa0366700 AT5G06250.3 33.557 149 76 6 314 444 37 180 9.09e-13 70.1
Msa0366700 AT3G61970.1 39.362 94 49 3 325 412 22 113 1.10e-12 70.5
Msa0366700 AT5G06250.1 33.557 149 76 6 314 444 37 180 1.10e-12 69.7
Msa0366700 AT2G46870.1 39.560 91 50 3 325 412 34 122 1.41e-12 70.1
Msa0366700 AT1G25560.1 34.167 120 65 4 325 432 194 311 5.69e-12 68.9
Msa0366700 AT1G01030.2 39.560 91 50 3 325 412 55 143 5.99e-12 68.6
Msa0366700 AT1G01030.1 39.560 91 50 3 325 412 55 143 6.72e-12 68.6
Msa0366700 AT3G11580.4 38.235 102 47 3 325 412 28 127 2.25e-11 65.1
Msa0366700 AT3G11580.2 38.235 102 47 3 325 412 28 127 2.25e-11 65.1
Msa0366700 AT3G11580.5 38.235 102 47 3 325 412 28 127 2.25e-11 65.1

Find 241 sgRNAs with CRISPR-Local

Find 549 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATATCCCTTGCATTATTT+TGG 0.089803 3_1:+61655702 None:intergenic
CTGTTCTTGGACCGCCATTT+TGG 0.208895 3_1:+61651472 None:intergenic
CAAACCTCAGCACAAGCTTT+TGG 0.244863 3_1:+61654505 None:intergenic
CAAAACTTAGTGATCATATA+TGG 0.245085 3_1:-61651512 Msa0366700:CDS
AAAAGTAAGAGATTGCTTAT+TGG 0.247967 3_1:-61653437 Msa0366700:CDS
ATGAATATAGAAACTGAAAA+AGG 0.252818 3_1:-61655221 Msa0366700:CDS
AACAACATGATTACATCTAA+TGG 0.257026 3_1:-61655563 Msa0366700:CDS
TCTGACATTGGTATGGTAAA+TGG 0.260179 3_1:-61658615 Msa0366700:CDS
GAACCTTCACATTTGGTTAC+TGG 0.267943 3_1:-61653566 Msa0366700:CDS
ATTTCAGTATTAACTGTTCT+TGG 0.275052 3_1:+61651459 None:intergenic
ATCAGTTACTTCCTAGATAT+TGG 0.275669 3_1:-61655145 Msa0366700:CDS
GATGTAATCATGTTGTTTAT+CGG 0.277647 3_1:+61655569 None:intergenic
GCAGGAAGTTCAACATTCTT+TGG 0.282712 3_1:-61651436 Msa0366700:CDS
CTCTGAAGGTCTTCCTTTGC+GGG 0.296256 3_1:-61654299 Msa0366700:CDS
TACATCCTGCTGTTGTTATT+AGG 0.296564 3_1:+61654229 None:intergenic
TATCTTGACTTCGGCGGTAT+TGG 0.305982 3_1:-61656927 Msa0366700:CDS
GGTTTGCTTAAAGCCGAAAA+TGG 0.307447 3_1:-61653536 Msa0366700:CDS
GTCGATGAAACGGGCCATTT+AGG 0.307880 3_1:+61655725 None:intergenic
CAGAAGGACCATACCTTTGC+TGG 0.313097 3_1:+61652245 None:intergenic
ATCCAAGACCATGAGCCTTC+TGG 0.325362 3_1:-61651984 Msa0366700:CDS
TAGATATTGGCCTAGGATTA+CGG 0.327990 3_1:-61655132 Msa0366700:CDS
TATTGGTAATGATGATTCTA+TGG 0.330411 3_1:-61653420 Msa0366700:CDS
TTCTCCTAAAACAGCTAAAC+TGG 0.334808 3_1:+61651947 None:intergenic
CATATTAATATGAACCAAAA+TGG 0.335008 3_1:-61651486 Msa0366700:CDS
GTAATACTGAAAATCCTAAA+TGG 0.335624 3_1:-61655739 Msa0366700:CDS
GCCGTCTTTGAATATGTGTT+TGG 0.340861 3_1:-61655387 Msa0366700:CDS
CTCTAAATGGAGAAAGTTAC+CGG 0.350506 3_1:-61652493 Msa0366700:CDS
ATATTCAGCGCCTCTTCATC+TGG 0.353236 3_1:-61653109 Msa0366700:CDS
AAGGCCGGTCTTTAACAGTT+TGG 0.353568 3_1:+61655247 None:intergenic
AAATACTTCCCAACTAAATA+TGG 0.354913 3_1:-61656889 Msa0366700:intron
GTTTCTTCTTGCGTAGCATA+AGG 0.356903 3_1:+61651757 None:intergenic
AAGAAGTTAGGCCGTCATTC+AGG 0.358196 3_1:-61655529 Msa0366700:CDS
ATTCATTACCCTTCACATCT+TGG 0.362672 3_1:+61654275 None:intergenic
CAGGAGCTGGAGCGTTTGTC+TGG 0.368698 3_1:-61655107 Msa0366700:CDS
AGCCAGAAGGCTCATGGTCT+TGG 0.374011 3_1:+61651982 None:intergenic
AATGTGATGATTGCTCTAAA+TGG 0.377625 3_1:-61652506 Msa0366700:CDS
AAGAAGAGGACTCGAAATAT+TGG 0.381088 3_1:-61653464 Msa0366700:CDS
AGGCCGGTCTTTAACAGTTT+GGG 0.381417 3_1:+61655248 None:intergenic
TCCGTTCACCAAATGGTAAC+GGG 0.384737 3_1:-61653613 Msa0366700:CDS
GGACATGTTCGGAAAATGTC+TGG 0.386985 3_1:-61652446 Msa0366700:CDS
ACATCCTGAACCTTCACATT+TGG 0.390011 3_1:-61653573 Msa0366700:CDS
TCATTCAGGGAAGGGGATAC+TGG 0.395233 3_1:-61655515 Msa0366700:CDS
CGAAGTTCCCCGTTACCATT+TGG 0.395408 3_1:+61653605 None:intergenic
CCGTCTTTGAATATGTGTTT+GGG 0.395837 3_1:-61655386 Msa0366700:CDS
ACAACATGATTACATCTAAT+GGG 0.396289 3_1:-61655562 Msa0366700:CDS
TCTACATCTGCACATTCTAA+TGG 0.401601 3_1:-61653710 Msa0366700:CDS
AAGAGAAGTTGCGAATCCTT+TGG 0.405293 3_1:-61651646 Msa0366700:CDS
GATTTACGTGCTGGTGATAC+TGG 0.406488 3_1:-61654169 Msa0366700:intron
ACTCTGAAGGTCTTCCTTTG+CGG 0.407452 3_1:-61654300 Msa0366700:CDS
TTATCGGAGCATGACTCATA+TGG 0.413523 3_1:+61655585 None:intergenic
TCTTTGGCCACTCAATCTAA+TGG 0.413775 3_1:-61651420 Msa0366700:CDS
TTTAACAGTTTGGGAAGTAT+AGG 0.414755 3_1:+61655257 None:intergenic
TCCCTTGAACTCAGCTCGTC+TGG 0.417698 3_1:+61652288 None:intergenic
CCACGTATTGCTCGGCCTCC+TGG 0.420064 3_1:-61655185 Msa0366700:CDS
GACAATGCTTGGCTTGACAC+TGG 0.420212 3_1:+61653349 None:intergenic
AACGGGGAACTTCGCTCAAA+TGG 0.422522 3_1:-61653596 Msa0366700:CDS
TTAAACTTACCATATTTAGT+TGG 0.425360 3_1:+61656880 None:intergenic
TCCTCGATTGTGACAATGCT+TGG 0.426368 3_1:+61653338 None:intergenic
ATGTGTTTGGGAAACCCGTC+AGG 0.426949 3_1:-61655374 Msa0366700:CDS
GTAACCAAATGTGAAGGTTC+AGG 0.430266 3_1:+61653569 None:intergenic
CTCAACTTTGCTTCAAGTGC+GGG 0.431608 3_1:-61658539 Msa0366700:intron
CACCAGACGAGCTGAGTTCA+AGG 0.433052 3_1:-61652290 Msa0366700:CDS
ATTGCTCGGCCTCCTGGTGA+TGG 0.435069 3_1:-61655179 Msa0366700:CDS
CATTTGGTTACTGGAGCTGC+TGG 0.436882 3_1:-61653557 Msa0366700:CDS
ACATTTAGTCGGATAGATCC+TGG 0.438208 3_1:-61653902 Msa0366700:CDS
TCCTCCCAAGTGGACATGTT+CGG 0.442585 3_1:-61652457 Msa0366700:CDS
GAGAAAACGTGAAGTGGGTA+TGG 0.445074 3_1:+61659033 None:intergenic
TCGGCCTCCTGGTGATGGGA+GGG 0.451096 3_1:-61655174 Msa0366700:CDS
ACCAATCCGACCTGCATCAC+TGG 0.451773 3_1:+61654540 None:intergenic
GGGTGTGACCCCTTGTATAC+AGG 0.451818 3_1:-61654197 Msa0366700:CDS
ATTCTCATTTCCACCAGAAA+AGG 0.451824 3_1:+61653667 None:intergenic
AACAACTCTTTCCCACCATC+TGG 0.452851 3_1:-61655350 Msa0366700:CDS
TTTCTTCTTGCGTAGCATAA+GGG 0.453058 3_1:+61651758 None:intergenic
GGACCTGCTGATTCCTCAGC+CGG 0.453893 3_1:-61651915 Msa0366700:CDS
CGGCCTCCTGGTGATGGGAG+GGG 0.454483 3_1:-61655173 Msa0366700:CDS
TAAACTTACCATATTTAGTT+GGG 0.454535 3_1:+61656881 None:intergenic
GCAAAAGTTAATGACTGAAC+AGG 0.455178 3_1:+61655470 None:intergenic
CACTTGCAAGTCATCGCGAT+TGG 0.460509 3_1:+61651545 None:intergenic
AAATCCATGGCCTGTATACA+AGG 0.462450 3_1:+61654187 None:intergenic
TTCTATATTCATGGTAAGGC+CGG 0.462900 3_1:+61655232 None:intergenic
AAATTCCATCGTCAACAAAC+TGG 0.467730 3_1:-61657111 Msa0366700:CDS
CAGTTTCTATATTCATGGTA+AGG 0.468963 3_1:+61655228 None:intergenic
AACAGTTAATACTGAAATGC+AGG 0.469413 3_1:-61651454 Msa0366700:CDS
CTCGGCCTCCTGGTGATGGG+AGG 0.470919 3_1:-61655175 Msa0366700:CDS
AAAGGGTGGGGTTTACGATC+TGG 0.472704 3_1:-61658570 Msa0366700:CDS
TAGGATTACGGACCAGGAGC+TGG 0.472738 3_1:-61655120 Msa0366700:CDS
GAGCAGCCGGGACGGTGTCT+AGG 0.474417 3_1:+61651876 None:intergenic
GGAAAGAGTTGTTCCCTGAC+GGG 0.480170 3_1:+61655360 None:intergenic
TAGATCTATCTTTCCAGCGC+TGG 0.481295 3_1:+61651578 None:intergenic
GATCTTCTCCGTTCACCAAA+TGG 0.483108 3_1:-61653620 Msa0366700:CDS
CTATGGAGTTGAGACTTACA+TGG 0.484609 3_1:-61653403 Msa0366700:CDS
AGAAGTTAGGCCGTCATTCA+GGG 0.485967 3_1:-61655528 Msa0366700:CDS
CCTTCAGAGTGTGTAATATG+AGG 0.486209 3_1:+61654313 None:intergenic
CTTGGCTTGACACTGGGCGG+TGG 0.487076 3_1:+61653356 None:intergenic
CCCCGTTACCATTTGGTGAA+CGG 0.487521 3_1:+61653612 None:intergenic
CAACAGCAGGATGTACGTAT+TGG 0.488320 3_1:-61654221 Msa0366700:CDS
GTGCTGAGTGCCAGTGATGC+AGG 0.488585 3_1:-61654550 Msa0366700:CDS
TTTAGTGGTGGCACCGGCTG+AGG 0.488675 3_1:+61651902 None:intergenic
TTCTCTTGATACTCCACCAT+TGG 0.489448 3_1:+61651662 None:intergenic
TACTTCCTAGATATTGGCCT+AGG 0.490891 3_1:-61655139 Msa0366700:CDS
AGAGAGAGAAAACGTGAAGT+GGG 0.493467 3_1:+61659028 None:intergenic
CATCTGCTTCACGCTCCGAT+TGG 0.494722 3_1:+61651733 None:intergenic
CAGACAAACGCTCCAGCTCC+TGG 0.495028 3_1:+61655108 None:intergenic
GACTATTTCATCCAGGGCGA+AGG 0.499486 3_1:-61652541 Msa0366700:intron
ATTCAGCTTTAGAGAAGAAG+AGG 0.500319 3_1:-61653478 Msa0366700:CDS
AAAACTTAGTGATCATATAT+GGG 0.502313 3_1:-61651511 Msa0366700:CDS
ACTTGCAAGTCATCGCGATT+GGG 0.503140 3_1:+61651546 None:intergenic
ATGGTTCGTGTGTTCATGAA+TGG 0.503991 3_1:-61658596 Msa0366700:CDS
CTCAGCACCTTCTCAAACAA+TGG 0.504763 3_1:+61654565 None:intergenic
GGGAAAGAGTTGTTCCCTGA+CGG 0.506096 3_1:+61655359 None:intergenic
TTCTAATGGCGGTTCTGCAA+AGG 0.510425 3_1:-61653696 Msa0366700:CDS
TTGCTCGGCCTCCTGGTGAT+GGG 0.511113 3_1:-61655178 Msa0366700:CDS
TAGAGAGAGAAAACGTGAAG+TGG 0.511563 3_1:+61659027 None:intergenic
TCTAATGGCGGTTCTGCAAA+GGG 0.512085 3_1:-61653695 Msa0366700:CDS
TTCTTACCCCTCCCATCACC+AGG 0.513704 3_1:+61655167 None:intergenic
ACTACAGACGGAAGACTTGA+GGG 0.517542 3_1:-61655320 Msa0366700:CDS
GATCTCGGCCCTTGATGAAA+GGG 0.518190 3_1:+61655284 None:intergenic
GCAAACAATACAAGAGCAGC+CGG 0.519642 3_1:+61651863 None:intergenic
GCCAGTGATGCAGGTCGGAT+TGG 0.520413 3_1:-61654541 Msa0366700:CDS
CATGAATGGAAGAAAGGGTG+GGG 0.520502 3_1:-61658582 Msa0366700:CDS
GTAATCCTAGGCCAATATCT+AGG 0.520534 3_1:+61655134 None:intergenic
GTAACCAACCTGTGTGTCTA+CGG 0.523912 3_1:+61653841 None:intergenic
TTTGGCCTAATAACAACAGC+AGG 0.525991 3_1:-61654234 Msa0366700:CDS
TTGGCCTAGGATTACGGACC+AGG 0.525994 3_1:-61655126 Msa0366700:CDS
ACAATGCTTGGCTTGACACT+GGG 0.526210 3_1:+61653350 None:intergenic
CATTTAGTCGGATAGATCCT+GGG 0.527144 3_1:-61653901 Msa0366700:CDS
ATGCTCTTCTTCCTCCCAAG+TGG 0.528369 3_1:-61652467 Msa0366700:CDS
AGAAAATAATAGACCAGCAT+GGG 0.528624 3_1:-61655441 Msa0366700:CDS
AAGATGTGAAGGGTAATGAA+TGG 0.530191 3_1:-61654273 Msa0366700:CDS
GATGATGAGCAATAATTCAC+TGG 0.530716 3_1:-61653510 Msa0366700:CDS
TTCATGAATGGAAGAAAGGG+TGG 0.533771 3_1:-61658584 Msa0366700:CDS
AACGAAGGAGGACTAAATAG+AGG 0.534232 3_1:-61651621 Msa0366700:CDS
GAGGTTGGTGAGTCCAGCGC+TGG 0.534753 3_1:-61651591 Msa0366700:CDS
GGAAATGAGAATCTTCCATT+GGG 0.534916 3_1:-61653656 Msa0366700:CDS
AGCTCCTGGTCCGTAATCCT+AGG 0.537010 3_1:+61655122 None:intergenic
ACGGTGTCTAGGATGTTTAG+TGG 0.537419 3_1:+61651887 None:intergenic
TTTCTCAACCACGTATTGCT+CGG 0.537803 3_1:-61655193 Msa0366700:CDS
AGATCTCGGCCCTTGATGAA+AGG 0.538168 3_1:+61655283 None:intergenic
CTCCGTTCACCAAATGGTAA+CGG 0.539360 3_1:-61653614 Msa0366700:CDS
GACCCCTTGTATACAGGCCA+TGG 0.540366 3_1:-61654191 Msa0366700:CDS
TTTATGAGTAATGTTGATGA+AGG 0.541550 3_1:-61655653 Msa0366700:CDS
TGGAAATGAGAATCTTCCAT+TGG 0.541952 3_1:-61653657 Msa0366700:CDS
GCACCGGCTGAGGAATCAGC+AGG 0.542856 3_1:+61651912 None:intergenic
CAGCAGGATGTACGTATTGG+AGG 0.545399 3_1:-61654218 Msa0366700:CDS
CAGGCCATGGATTTACGTGC+TGG 0.546070 3_1:-61654178 Msa0366700:CDS
ATCTTCACCATTAGATTGAG+TGG 0.548784 3_1:+61651413 None:intergenic
GACTACAGACGGAAGACTTG+AGG 0.549307 3_1:-61655321 Msa0366700:CDS
GTATCTCCTCCCTTTCATCA+AGG 0.552113 3_1:-61655293 Msa0366700:CDS
GGAGGAAGAAGAGCATCAAC+CGG 0.553613 3_1:+61652474 None:intergenic
CGTCTAAGCCAGAAGGCTCA+TGG 0.559438 3_1:+61651976 None:intergenic
AACTCTTTCCCACCATCTGG+TGG 0.563581 3_1:-61655347 Msa0366700:CDS
CATCGACCCAAAATAATGCA+AGG 0.564184 3_1:-61655709 Msa0366700:CDS
GCCAACCAGTTTGTTGACGA+TGG 0.565303 3_1:+61657106 None:intergenic
TGTGTTCATGAATGGAAGAA+AGG 0.567539 3_1:-61658588 Msa0366700:CDS
TATTCAGCGCCTCTTCATCT+GGG 0.569422 3_1:-61653108 Msa0366700:intron
CCTCATATTACACACTCTGA+AGG 0.570324 3_1:-61654313 Msa0366700:CDS
TGATTGATGGGTTCTGACAT+TGG 0.570447 3_1:-61658627 Msa0366700:exon
AAAATGTCTGGGATACAAGC+AGG 0.570539 3_1:-61652434 Msa0366700:intron
CTATATGATATATGAATACA+CGG 0.571014 3_1:+61651235 None:intergenic
AGGATGTTTAGTGGTGGCAC+CGG 0.576776 3_1:+61651896 None:intergenic
TCTGTAGTCTCTCCACCAGA+TGG 0.577437 3_1:+61655335 None:intergenic
ACATTTCATTTAGGAACCCC+CGG 0.578032 3_1:-61653149 Msa0366700:intron
TCATGAATGGAAGAAAGGGT+GGG 0.579128 3_1:-61658583 Msa0366700:CDS
GATGGGTTCTGACATTGGTA+TGG 0.579449 3_1:-61658622 Msa0366700:CDS
TAGAAAATAATAGACCAGCA+TGG 0.580283 3_1:-61655442 Msa0366700:CDS
ACTACGCATCCACTGTGGAT+AGG 0.582032 3_1:+61656969 None:intergenic
GGAAGTATAGGACGAGATCT+CGG 0.585045 3_1:+61655269 None:intergenic
AGTAGTGCCATTGTTTGAGA+AGG 0.585604 3_1:-61654572 Msa0366700:CDS
TATCTCCTCCCTTTCATCAA+GGG 0.585643 3_1:-61655292 Msa0366700:CDS
GACATGTTCGGAAAATGTCT+GGG 0.586198 3_1:-61652445 Msa0366700:CDS
TAGGCCGTCATTCAGGGAAG+GGG 0.586518 3_1:-61655522 Msa0366700:CDS
TTCACATCTTGGACCCGCAA+AGG 0.587006 3_1:+61654286 None:intergenic
ACGCAAGAAGAAACGCCAAT+CGG 0.587841 3_1:-61651748 Msa0366700:CDS
CACACGTTGCAAGTACATGT+TGG 0.588233 3_1:+61651807 None:intergenic
GCTCAACTTTGCTTCAAGTG+CGG 0.588515 3_1:-61658540 Msa0366700:CDS
TTTGCGGGTCCAAGATGTGA+AGG 0.588681 3_1:-61654284 Msa0366700:CDS
AAAATTCTAGCTCAAACAAG+TGG 0.591054 3_1:+61651269 None:intergenic
TTAGGCCGTCATTCAGGGAA+GGG 0.591509 3_1:-61655523 Msa0366700:CDS
TCTCCCAAAAGCTTGTGCTG+AGG 0.591970 3_1:-61654509 Msa0366700:intron
CTTCCCAAACTGTTAAAGAC+CGG 0.592604 3_1:-61655251 Msa0366700:CDS
AATAGAGGTCAAGTCGAGGT+TGG 0.593423 3_1:-61651606 Msa0366700:CDS
ATCAAATTCCGTAGACACAC+AGG 0.593716 3_1:-61653849 Msa0366700:intron
TCCATCGTCAACAAACTGGT+TGG 0.594004 3_1:-61657107 Msa0366700:CDS
CCCAAACACATATTCAAAGA+CGG 0.594377 3_1:+61655386 None:intergenic
GTAGTCTCTCCACCAGATGG+TGG 0.595253 3_1:+61655338 None:intergenic
TCCGAACATGTCCACTTGGG+AGG 0.595376 3_1:+61652456 None:intergenic
CAATCGCGATGACTTGCAAG+TGG 0.596887 3_1:-61651544 Msa0366700:CDS
ATTTGGTGAACGGAGAAGAT+CGG 0.599027 3_1:+61653622 None:intergenic
GTGTTCATGAATGGAAGAAA+GGG 0.600298 3_1:-61658587 Msa0366700:CDS
AGTCAAAAGAATCTGTCTTG+AGG 0.600336 3_1:-61651303 Msa0366700:exon
ATCACCAGCACGTAAATCCA+TGG 0.602400 3_1:+61654174 None:intergenic
ATCGACCCAAAATAATGCAA+GGG 0.604714 3_1:-61655708 Msa0366700:CDS
GGACTCTTACCCAGATGAAG+AGG 0.605539 3_1:+61653099 None:intergenic
AAACATCCTAGACACCGTCC+CGG 0.605642 3_1:-61651882 Msa0366700:CDS
CTGTTCGAGTATCTTGACTT+CGG 0.606779 3_1:-61656936 Msa0366700:CDS
GTTAGGCCGTCATTCAGGGA+AGG 0.607605 3_1:-61655524 Msa0366700:CDS
ATCCAGGGCGAAGGAACAGT+GGG 0.611280 3_1:-61652532 Msa0366700:intron
CAATACAAGAGCAGCCGGGA+CGG 0.612035 3_1:+61651868 None:intergenic
ATTTAGTCGGATAGATCCTG+GGG 0.615648 3_1:-61653900 Msa0366700:CDS
CATCCAGGGCGAAGGAACAG+TGG 0.616293 3_1:-61652533 Msa0366700:intron
TAGTCTCTCCACCAGATGGT+GGG 0.617495 3_1:+61655339 None:intergenic
ACCAGACGAGCTGAGTTCAA+GGG 0.617947 3_1:-61652289 Msa0366700:CDS
AGCAGGATGTACGTATTGGA+GGG 0.621631 3_1:-61654217 Msa0366700:CDS
CTCGGCCCTTGATGAAAGGG+AGG 0.622138 3_1:+61655287 None:intergenic
TATGGAGTTGAGACTTACAT+GGG 0.625949 3_1:-61653402 Msa0366700:CDS
GCGAATCCTTTGGAAAACGA+AGG 0.630328 3_1:-61651636 Msa0366700:CDS
TCGGCACAATTACTTCCCAA+TGG 0.636661 3_1:+61653641 None:intergenic
GCCAAGCATTGTCACAATCG+AGG 0.639692 3_1:-61653339 Msa0366700:CDS
GCGAGAGCGTCTAAGCCAGA+AGG 0.639894 3_1:+61651969 None:intergenic
GGGTGGGGTTTACGATCTGG+TGG 0.639993 3_1:-61658567 Msa0366700:CDS
ATCCATGGCCTGTATACAAG+GGG 0.641805 3_1:+61654189 None:intergenic
CCAGGAGGCCGAGCAATACG+TGG 0.643456 3_1:+61655185 None:intergenic
TTCGAGTATCTTGACTTCGG+CGG 0.643639 3_1:-61656933 Msa0366700:CDS
AATCCTTTGGAAAACGAAGG+AGG 0.647862 3_1:-61651633 Msa0366700:CDS
AATCCATGGCCTGTATACAA+GGG 0.649731 3_1:+61654188 None:intergenic
ATGCTTGGCTTGACACTGGG+CGG 0.650343 3_1:+61653353 None:intergenic
GTATCCCCTTCCCTGAATGA+CGG 0.651045 3_1:+61655518 None:intergenic
CAAACAATACAAGAGCAGCC+GGG 0.651183 3_1:+61651864 None:intergenic
AAAGTTAATGACTGAACAGG+CGG 0.651260 3_1:+61655473 None:intergenic
CAGTCCGCTGTCAAAATGAG+CGG 0.652887 3_1:+61655676 None:intergenic
ACATCTGCACATTCTAATGG+CGG 0.654007 3_1:-61653707 Msa0366700:CDS
AGAGTGTAACATTTGCAACA+AGG 0.654770 3_1:-61657082 Msa0366700:intron
GCTCCAGTAACCAAATGTGA+AGG 0.655029 3_1:+61653563 None:intergenic
ATTAATATGAACCAAAATGG+CGG 0.658414 3_1:-61651483 Msa0366700:CDS
CTCAAACAATGGCACTACTG+TGG 0.661874 3_1:+61654576 None:intergenic
GACGAGTCAGATACCAATGG+TGG 0.670161 3_1:-61651675 Msa0366700:CDS
TCTGGTGGAGAGACTACAGA+CGG 0.671314 3_1:-61655332 Msa0366700:CDS
TGTGTTTGGGAAACCCGTCA+GGG 0.671474 3_1:-61655373 Msa0366700:CDS
GCATGCATGAATCAAATGCG+AGG 0.672254 3_1:-61655409 Msa0366700:CDS
CCGTTCACCAAATGGTAACG+GGG 0.672434 3_1:-61653612 Msa0366700:CDS
GTGTCTAGGATGTTTAGTGG+TGG 0.674341 3_1:+61651890 None:intergenic
TTGCGGGTCCAAGATGTGAA+GGG 0.674468 3_1:-61654283 Msa0366700:CDS
AAGTGGGTATGGATTTGATG+AGG 0.678760 3_1:+61659044 None:intergenic
GTTCTGCAGCCTATCCACAG+TGG 0.681151 3_1:-61656978 Msa0366700:intron
TGTGTACGACCGTGAAACGT+CGG 0.681271 3_1:-61651788 Msa0366700:CDS
ACTAAATAGAGGTCAAGTCG+AGG 0.689469 3_1:-61651610 Msa0366700:CDS
GTTGACGAGTCAGATACCAA+TGG 0.701417 3_1:-61651678 Msa0366700:CDS
TGAGTGCCAGTGATGCAGGT+CGG 0.705207 3_1:-61654546 Msa0366700:CDS
TTACCCCTCCCATCACCAGG+AGG 0.730237 3_1:+61655170 None:intergenic
TAGATACTACGCATCCACTG+TGG 0.761062 3_1:+61656964 None:intergenic
TTTAGTCGGATAGATCCTGG+GGG 0.790573 3_1:-61653899 Msa0366700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATGATTCTTTATTTTTT+TGG - chr3_1:61651775-61651794 Msa0366700:CDS 10.0%
!!! ATAAAATTACTTTTTTTTAG+GGG + chr3_1:61652189-61652208 None:intergenic 10.0%
!! CAATTAATATAATCTAAAAA+AGG + chr3_1:61652399-61652418 None:intergenic 10.0%
!! AATTATAAATTTCAGTATAA+AGG + chr3_1:61655123-61655142 None:intergenic 10.0%
!! ATTAATATGATAATAATCAA+CGG + chr3_1:61655235-61655254 None:intergenic 10.0%
!! TAATGTAGAAAATAAAAATA+TGG + chr3_1:61656939-61656958 None:intergenic 10.0%
!! TTTACATCAAAAACAATAAA+GGG + chr3_1:61651432-61651451 None:intergenic 15.0%
!! ATTTACATCAAAAACAATAA+AGG + chr3_1:61651433-61651452 None:intergenic 15.0%
!!! TTAGATTCTAATTTTAGTTT+TGG - chr3_1:61651716-61651735 Msa0366700:CDS 15.0%
!!! TAGATTCTAATTTTAGTTTT+GGG - chr3_1:61651717-61651736 Msa0366700:CDS 15.0%
!! ATTGTAAGTATAACAATATA+TGG - chr3_1:61652341-61652360 Msa0366700:intron 15.0%
!! ATTAAACAAAAATTAACCAT+AGG + chr3_1:61653386-61653405 None:intergenic 15.0%
!! TAACAACTAATTACTAATAT+TGG - chr3_1:61654012-61654031 Msa0366700:intron 15.0%
!! TGAACATAATTAGAAAAATA+AGG + chr3_1:61654255-61654274 None:intergenic 15.0%
!!! ACTGAAATTTATAATTTTAG+AGG - chr3_1:61655127-61655146 Msa0366700:CDS 15.0%
!!! CTGAAATTTATAATTTTAGA+GGG - chr3_1:61655128-61655147 Msa0366700:CDS 15.0%
!!! TTTAAAATTTATGAAGTTTG+TGG - chr3_1:61655381-61655400 Msa0366700:CDS 15.0%
!!! TTTAAAACGAGTTATTAAAT+AGG - chr3_1:61655461-61655480 Msa0366700:CDS 15.0%
!! TTAAAACGAGTTATTAAATA+GGG - chr3_1:61655462-61655481 Msa0366700:CDS 15.0%
!! TGGTTATTGTTTAAATAAAT+AGG - chr3_1:61656459-61656478 Msa0366700:intron 15.0%
!!! ATATTTTACAAATTTTTTGG+TGG - chr3_1:61657856-61657875 Msa0366700:intron 15.0%
!!! AAATTTTGAAACTTTATGCA+TGG - chr3_1:61651449-61651468 Msa0366700:CDS 20.0%
!!! TTTTGATTTGATTTTGACTT+TGG - chr3_1:61651514-61651533 Msa0366700:CDS 20.0%
!!! AAATTTGGAATTTTGATTGA+TGG - chr3_1:61651557-61651576 Msa0366700:CDS 20.0%
!!! AATTTGGAATTTTGATTGAT+GGG - chr3_1:61651558-61651577 Msa0366700:CDS 20.0%
!!! AGATTCTAATTTTAGTTTTG+GGG - chr3_1:61651718-61651737 Msa0366700:CDS 20.0%
!!! TTGGATTTTGATAATCTAAT+TGG - chr3_1:61651794-61651813 Msa0366700:CDS 20.0%
!! TATCATCTAATTTAGTCATT+AGG + chr3_1:61652121-61652140 None:intergenic 20.0%
!! TAATGACTAAATTAGATGAT+AGG - chr3_1:61652120-61652139 Msa0366700:intron 20.0%
!!! TATTCTGTTGATTGATTTTT+CGG - chr3_1:61652263-61652282 Msa0366700:CDS 20.0%
!! AGGAAATATATTTGTCATAT+TGG + chr3_1:61652379-61652398 None:intergenic 20.0%
!! TATTAAATGCTTAACTGTAT+AGG - chr3_1:61652419-61652438 Msa0366700:intron 20.0%
!! ATCATAAATAAACCATTTGA+TGG + chr3_1:61652563-61652582 None:intergenic 20.0%
!! TCAAATGGTTTATTTATGAT+AGG - chr3_1:61652563-61652582 Msa0366700:intron 20.0%
!! TTAAGTTCTATTTGGATTAA+TGG + chr3_1:61652919-61652938 None:intergenic 20.0%
!! GAATATACTTAAGTTCTATT+TGG + chr3_1:61652927-61652946 None:intergenic 20.0%
!! TAAACTTACCATATTTAGTT+GGG + chr3_1:61653319-61653338 None:intergenic 20.0%
!! TTAAACTTACCATATTTAGT+TGG + chr3_1:61653320-61653339 None:intergenic 20.0%
!!! GTTTCGAAGATTTTTTTTAA+TGG - chr3_1:61653666-61653685 Msa0366700:CDS 20.0%
!! ATGTAAAAATGACAATTTCA+AGG - chr3_1:61653832-61653851 Msa0366700:intron 20.0%
!! ATAAGTTCTTTATCCAAAAT+GGG + chr3_1:61653885-61653904 None:intergenic 20.0%
!! AATAAGTTCTTTATCCAAAA+TGG + chr3_1:61653886-61653905 None:intergenic 20.0%
!!! ATAATAAGAGCTTTATGTAT+AGG - chr3_1:61653917-61653936 Msa0366700:intron 20.0%
!!! TAATAAGAGCTTTATGTATA+GGG - chr3_1:61653918-61653937 Msa0366700:intron 20.0%
!! TAGTAATTAGTTGTTATGTT+CGG + chr3_1:61654008-61654027 None:intergenic 20.0%
!!! TAAACACTTTTTTTTTGCAA+CGG + chr3_1:61654038-61654057 None:intergenic 20.0%
!!! TTTTTCAGTTTCTATATTCA+TGG + chr3_1:61654977-61654996 None:intergenic 20.0%
!! ATGAATATAGAAACTGAAAA+AGG - chr3_1:61654976-61654995 Msa0366700:intron 20.0%
!! TGAATATAGAAACTGAAAAA+GGG - chr3_1:61654977-61654996 Msa0366700:intron 20.0%
!! TTCTGATTTATATGAAACTT+TGG + chr3_1:61655268-61655287 None:intergenic 20.0%
!!! AATAAGAGCATTTAATTTGA+TGG - chr3_1:61655417-61655436 Msa0366700:CDS 20.0%
!! TAAAGATAAAAAAGGAAACA+CGG + chr3_1:61655751-61655770 None:intergenic 20.0%
!! CATTCAGATAAAGATAAAAA+AGG + chr3_1:61655759-61655778 None:intergenic 20.0%
!!! ACATCTTTACTTTTTGTTTT+TGG - chr3_1:61656423-61656442 Msa0366700:intron 20.0%
!!! TTTTTGGTGAATATGATTAA+TGG - chr3_1:61656439-61656458 Msa0366700:intron 20.0%
!!! AAGTTTATGAAAATAGCTTT+TGG - chr3_1:61657194-61657213 Msa0366700:intron 20.0%
!! GGTAATACTGATATTATTAA+TGG + chr3_1:61657793-61657812 None:intergenic 20.0%
!! AAAACTTAGTGATCATATAT+GGG - chr3_1:61658686-61658705 Msa0366700:intron 20.0%
!! CATATTAATATGAACCAAAA+TGG - chr3_1:61658711-61658730 Msa0366700:intron 20.0%
!! CTATATGATATATGAATACA+CGG + chr3_1:61658965-61658984 None:intergenic 20.0%
!!! AGTTTGCTTTATTTTTCAAA+AGG - chr3_1:61658992-61659011 Msa0366700:intron 20.0%
!!! GTTTGCTTTATTTTTCAAAA+GGG - chr3_1:61658993-61659012 Msa0366700:intron 20.0%
!!! TTTTTATTCAAGAGTGAAAA+AGG - chr3_1:61659080-61659099 Msa0366700:five_prime_UTR 20.0%
!!! TTTTATTCAAGAGTGAAAAA+GGG - chr3_1:61659081-61659100 Msa0366700:five_prime_UTR 20.0%
!!! CTTGGTGAATGTTTTTTTTT+TGG - chr3_1:61651387-61651406 Msa0366700:CDS 25.0%
! ATTAATGAGTTTGAGGATTA+TGG - chr3_1:61651481-61651500 Msa0366700:CDS 25.0%
! TTAATGAGTTTGAGGATTAT+GGG - chr3_1:61651482-61651501 Msa0366700:CDS 25.0%
!!! TTTGATTTTGACTTTGGTTT+TGG - chr3_1:61651520-61651539 Msa0366700:CDS 25.0%
!!! TTGATTTTGACTTTGGTTTT+GGG - chr3_1:61651521-61651540 Msa0366700:CDS 25.0%
! CATAGCAAAATCAAAGAAAA+AGG + chr3_1:61651695-61651714 None:intergenic 25.0%
! AGGATCAATGTATCTAATTT+GGG - chr3_1:61652088-61652107 Msa0366700:intron 25.0%
! TTCTTGTCATACTAGATTTA+TGG - chr3_1:61652290-61652309 Msa0366700:CDS 25.0%
!! TTTTAGATACTTCCATCAAA+TGG - chr3_1:61652548-61652567 Msa0366700:intron 25.0%
!! AAAACCAAAAGTATAAGAGA+AGG + chr3_1:61652968-61652987 None:intergenic 25.0%
! AAATACTTCCCAACTAAATA+TGG - chr3_1:61653308-61653327 Msa0366700:intron 25.0%
! GGAAGAAAAAAAAATCAACA+GGG + chr3_1:61653354-61653373 None:intergenic 25.0%
! ATTAACCATAGGTTACAAAT+GGG + chr3_1:61653375-61653394 None:intergenic 25.0%
! AATTAACCATAGGTTACAAA+TGG + chr3_1:61653376-61653395 None:intergenic 25.0%
! TATCACTAAAATAATCACGA+AGG + chr3_1:61653532-61653551 None:intergenic 25.0%
!!! TCGTGATTATTTTAGTGATA+TGG - chr3_1:61653532-61653551 Msa0366700:CDS 25.0%
! TTGTGAGTTGTATCAAAATT+TGG - chr3_1:61653564-61653583 Msa0366700:CDS 25.0%
! TGGTTTATGATAGAACATTA+TGG - chr3_1:61653584-61653603 Msa0366700:CDS 25.0%
!! TTTGTGTTATTACGTTTACT+TGG - chr3_1:61653701-61653720 Msa0366700:CDS 25.0%
! AGTAATTAGTTGTTATGTTC+GGG + chr3_1:61654007-61654026 None:intergenic 25.0%
! GTAATACTGAAAATCCTAAA+TGG - chr3_1:61654458-61654477 Msa0366700:intron 25.0%
!! AATATCCCTTGCATTATTTT+GGG + chr3_1:61654497-61654516 None:intergenic 25.0%
!! TTTATGAGTAATGTTGATGA+AGG - chr3_1:61654544-61654563 Msa0366700:CDS 25.0%
!! GATGTAATCATGTTGTTTAT+CGG + chr3_1:61654631-61654650 None:intergenic 25.0%
! AACAACATGATTACATCTAA+TGG - chr3_1:61654634-61654653 Msa0366700:intron 25.0%
! ACAACATGATTACATCTAAT+GGG - chr3_1:61654635-61654654 Msa0366700:intron 25.0%
! GATTTATATGAAACTTTGGA+TGG + chr3_1:61655264-61655283 None:intergenic 25.0%
! ATTAAATGCTCTTATTGAGT+AGG + chr3_1:61655413-61655432 None:intergenic 25.0%
! AGAACTATAAATTATGAGCA+GGG + chr3_1:61655524-61655543 None:intergenic 25.0%
! AAGAACTATAAATTATGAGC+AGG + chr3_1:61655525-61655544 None:intergenic 25.0%
! TATCTTTATCTGAATGAGTA+TGG - chr3_1:61655763-61655782 Msa0366700:intron 25.0%
! GTAACAGATCAATTCTATAA+GGG + chr3_1:61656160-61656179 None:intergenic 25.0%
! TGTAACAGATCAATTCTATA+AGG + chr3_1:61656161-61656180 None:intergenic 25.0%
! ATAATTCGAAGAAAATACCA+TGG + chr3_1:61656403-61656422 None:intergenic 25.0%
!!! TCTCTAAAGCTGAATTTTTT+TGG + chr3_1:61656714-61656733 None:intergenic 25.0%
! AAAAGTAAGAGATTGCTTAT+TGG - chr3_1:61656760-61656779 Msa0366700:intron 25.0%
!!! TATTGGTAATGATGATTCTA+TGG - chr3_1:61656777-61656796 Msa0366700:intron 25.0%
! GAATGTAAACTGATATAGTT+TGG - chr3_1:61656974-61656993 Msa0366700:intron 25.0%
! ATCCAAATAAGCAAAATGTT+TGG + chr3_1:61657122-61657141 None:intergenic 25.0%
!! AACATTTTGCTTATTTGGAT+TGG - chr3_1:61657122-61657141 Msa0366700:CDS 25.0%
! AGCAAACTTCCTATAATAAT+CGG - chr3_1:61657446-61657465 Msa0366700:intron 25.0%
!! AACTGTTTTCCGATTATTAT+AGG + chr3_1:61657458-61657477 None:intergenic 25.0%
! TGCTTTCATAAAGCATAAAT+AGG + chr3_1:61657578-61657597 None:intergenic 25.0%
!! TTGAAATTATCATGATGATG+TGG - chr3_1:61657599-61657618 Msa0366700:intron 25.0%
!! AATATCAGTATTACCACTTT+TGG - chr3_1:61657798-61657817 Msa0366700:intron 25.0%
! CAAAACTTAGTGATCATATA+TGG - chr3_1:61658685-61658704 Msa0366700:intron 25.0%
! ATTAATATGAACCAAAATGG+CGG - chr3_1:61658714-61658733 Msa0366700:intron 25.0%
! ATTTCAGTATTAACTGTTCT+TGG + chr3_1:61658741-61658760 None:intergenic 25.0%
!!! TCTTTTTTCTTTGTTCTCAA+CGG + chr3_1:61658847-61658866 None:intergenic 25.0%
! TTTATTCAAGAGTGAAAAAG+GGG - chr3_1:61659082-61659101 Msa0366700:five_prime_UTR 25.0%
! GAAAAAATAAAGTGGATAGT+GGG + chr3_1:61659144-61659163 None:intergenic 25.0%
! AGAAAAAATAAAGTGGATAG+TGG + chr3_1:61659145-61659164 None:intergenic 25.0%
!!! CTATCCACTTTATTTTTTCT+TGG - chr3_1:61659145-61659164 Msa0366700:five_prime_UTR 25.0%
! TTCACCAAGAAAAAATAAAG+TGG + chr3_1:61659152-61659171 None:intergenic 25.0%
! AACCTAGGATTTAGGATAAT+GGG + chr3_1:61651335-61651354 None:intergenic 30.0%
! AAACCTAGGATTTAGGATAA+TGG + chr3_1:61651336-61651355 None:intergenic 30.0%
GTGAGTTATTAATGAGTTTG+AGG - chr3_1:61651474-61651493 Msa0366700:CDS 30.0%
!! GGTATTTTTCAGCTGAAATT+TGG - chr3_1:61651542-61651561 Msa0366700:CDS 30.0%
TATATCCTTTCTTACCATTC+CGG - chr3_1:61651833-61651852 Msa0366700:CDS 30.0%
TATGTTGTGATTGTGTATTG+TGG - chr3_1:61652016-61652035 Msa0366700:CDS 30.0%
GAGGATCAATGTATCTAATT+TGG - chr3_1:61652087-61652106 Msa0366700:intron 30.0%
TTGTCATACTAGATTTATGG+AGG - chr3_1:61652293-61652312 Msa0366700:CDS 30.0%
ATACTAGATTTATGGAGGAA+TGG - chr3_1:61652298-61652317 Msa0366700:CDS 30.0%
GTTATACTTACAATGTGTCA+AGG + chr3_1:61652335-61652354 None:intergenic 30.0%
ATCCAGTCAACTTAATTAAG+AGG - chr3_1:61652478-61652497 Msa0366700:CDS 30.0%
TCCAGTCAACTTAATTAAGA+GGG - chr3_1:61652479-61652498 Msa0366700:CDS 30.0%
! CTTGCAATTTTGCAAATACA+GGG + chr3_1:61652874-61652893 None:intergenic 30.0%
! TCTTCCTTCTCTTATACTTT+TGG - chr3_1:61652961-61652980 Msa0366700:intron 30.0%
ACAAAAAACTGAACTCTCAA+AGG + chr3_1:61653063-61653082 None:intergenic 30.0%
TCATTGAAATCTGTTTGACT+TGG - chr3_1:61653197-61653216 Msa0366700:intron 30.0%
GGGAAGAAAAAAAAATCAAC+AGG + chr3_1:61653355-61653374 None:intergenic 30.0%
TTGATACAACTCACAAAATG+CGG + chr3_1:61653560-61653579 None:intergenic 30.0%
CGTAATAACACAAAAATTGC+TGG + chr3_1:61653695-61653714 None:intergenic 30.0%
!! TTACTTGGCTTTTGAATGTA+TGG - chr3_1:61653716-61653735 Msa0366700:CDS 30.0%
!! TACTTGGCTTTTGAATGTAT+GGG - chr3_1:61653717-61653736 Msa0366700:CDS 30.0%
AAAAAGCTGAATACAGACTA+TGG - chr3_1:61654135-61654154 Msa0366700:intron 30.0%
AAACTGTTAAAGAGAGCTTA+AGG + chr3_1:61654187-61654206 None:intergenic 30.0%
!!! ATTATTTTGGGTCGATGAAA+CGG + chr3_1:61654485-61654504 None:intergenic 30.0%
! GAATATCCCTTGCATTATTT+TGG + chr3_1:61654498-61654517 None:intergenic 30.0%
GGAAAAACAATCAAGAAGTT+AGG - chr3_1:61654656-61654675 Msa0366700:intron 30.0%
! TGGTCTATTATTTTCTAACG+TGG + chr3_1:61654752-61654771 None:intergenic 30.0%
TAGAAAATAATAGACCAGCA+TGG - chr3_1:61654755-61654774 Msa0366700:intron 30.0%
AGAAAATAATAGACCAGCAT+GGG - chr3_1:61654756-61654775 Msa0366700:intron 30.0%
! TTTAACAGTTTGGGAAGTAT+AGG + chr3_1:61654943-61654962 None:intergenic 30.0%
CAGTTTCTATATTCATGGTA+AGG + chr3_1:61654972-61654991 None:intergenic 30.0%
ATCAGTTACTTCCTAGATAT+TGG - chr3_1:61655052-61655071 Msa0366700:intron 30.0%
TAGCTATGTAATATGACAAC+TGG - chr3_1:61655293-61655312 Msa0366700:CDS 30.0%
CGTCAAATTGATGCATAATA+AGG + chr3_1:61655337-61655356 None:intergenic 30.0%
! GACGTTACTTTATGAAGTAT+CGG - chr3_1:61655353-61655372 Msa0366700:CDS 30.0%
! ACGTTACTTTATGAAGTATC+GGG - chr3_1:61655354-61655373 Msa0366700:CDS 30.0%
!! AGAGCATTTAATTTGATGGT+TGG - chr3_1:61655421-61655440 Msa0366700:CDS 30.0%
AACTGTTATCGTTACATCAA+GGG + chr3_1:61655595-61655614 None:intergenic 30.0%
AAACTGTTATCGTTACATCA+AGG + chr3_1:61655596-61655615 None:intergenic 30.0%
CGAAAAACAACTACAGAAAT+TGG + chr3_1:61655791-61655810 None:intergenic 30.0%
! GGACTTTTCAATTCAGATTT+TGG - chr3_1:61655945-61655964 Msa0366700:intron 30.0%
GGTTTGTATCTACATAGTAA+TGG + chr3_1:61656194-61656213 None:intergenic 30.0%
! CTTTTGCAGTTACATTTAGT+CGG - chr3_1:61656284-61656303 Msa0366700:intron 30.0%
AAATACCATGGACAGTAAAA+TGG + chr3_1:61656391-61656410 None:intergenic 30.0%
!! TAAGCAATCTCTTACTTTTG+AGG + chr3_1:61656759-61656778 None:intergenic 30.0%
TTTCTACATTAGCTATTGCA+AGG - chr3_1:61656948-61656967 Msa0366700:CDS 30.0%
! CATGTTCAAGTTATATCACA+TGG - chr3_1:61657002-61657021 Msa0366700:intron 30.0%
AACTGTGCTACATTTCATTT+AGG - chr3_1:61657039-61657058 Msa0366700:intron 30.0%
ATTGTTCTCTTTCCAAAAAC+CGG + chr3_1:61657070-61657089 None:intergenic 30.0%
! GTCCAAACATTTTGCTTATT+TGG - chr3_1:61657117-61657136 Msa0366700:CDS 30.0%
TATAAGTGCTTATGTATGAC+TGG - chr3_1:61657353-61657372 Msa0366700:intron 30.0%
CTACAGTTGAATAGAAAATG+AGG - chr3_1:61657379-61657398 Msa0366700:intron 30.0%
TAAAGCATAAATAGGATCCA+AGG + chr3_1:61657570-61657589 None:intergenic 30.0%
! TATGTTGACTATTTCATCCA+GGG - chr3_1:61657650-61657669 Msa0366700:intron 30.0%
! AATGTGATGATTGCTCTAAA+TGG - chr3_1:61657691-61657710 Msa0366700:intron 30.0%
!!! AATCTTTTGAAATCCAGCAA+AGG - chr3_1:61657939-61657958 Msa0366700:intron 30.0%
TCTTATCAAAAACAGACAGA+AGG + chr3_1:61657971-61657990 None:intergenic 30.0%
GATTATTATACTCATCAGAG+AGG + chr3_1:61658121-61658140 None:intergenic 30.0%
AATGTAATCGGAACAATTCA+GGG + chr3_1:61658143-61658162 None:intergenic 30.0%
AAATGTAATCGGAACAATTC+AGG + chr3_1:61658144-61658163 None:intergenic 30.0%
TGAATTGTTCCGATTACATT+TGG - chr3_1:61658143-61658162 Msa0366700:intron 30.0%
!!! TGTTTTAGGAGAAAATCTCT+TGG - chr3_1:61658260-61658279 Msa0366700:intron 30.0%
!!! GTTTTAGGAGAAAATCTCTT+GGG - chr3_1:61658261-61658280 Msa0366700:intron 30.0%
!!! GTTGTGAATGTGTTCTTTTT+TGG + chr3_1:61658496-61658515 None:intergenic 30.0%
AACAGTTAATACTGAAATGC+AGG - chr3_1:61658743-61658762 Msa0366700:intron 30.0%
!! AAAATTCTAGCTCAAACAAG+TGG + chr3_1:61658931-61658950 None:intergenic 30.0%
TTATTCAAGAGTGAAAAAGG+GGG - chr3_1:61659083-61659102 Msa0366700:five_prime_UTR 30.0%
!! TTTTCTCTCTCTAAAAACCC+AGG - chr3_1:61651180-61651199 Msa0366700:three_prime_UTR 35.0%
GTAGAAGAAGAAATTGACCT+GGG + chr3_1:61651200-61651219 None:intergenic 35.0%
TGTAGAAGAAGAAATTGACC+TGG + chr3_1:61651201-61651220 None:intergenic 35.0%
! AATCTAAGACAAGAGCAATG+AGG + chr3_1:61651224-61651243 None:intergenic 35.0%
CAAAAGGAAACCTAGGATTT+AGG + chr3_1:61651343-61651362 None:intergenic 35.0%
! AAATCCTAGGTTTCCTTTTG+TGG - chr3_1:61651343-61651362 Msa0366700:CDS 35.0%
! AATCCTAGGTTTCCTTTTGT+GGG - chr3_1:61651344-61651363 Msa0366700:CDS 35.0%
TCTGACATTGGTATGGTAAA+TGG - chr3_1:61651582-61651601 Msa0366700:CDS 35.0%
TGTGTTCATGAATGGAAGAA+AGG - chr3_1:61651609-61651628 Msa0366700:CDS 35.0%
GTGTTCATGAATGGAAGAAA+GGG - chr3_1:61651610-61651629 Msa0366700:CDS 35.0%
ATATCCTTTCTTACCATTCC+GGG - chr3_1:61651834-61651853 Msa0366700:CDS 35.0%
TGACTAAAATGTGAGCTGTT+TGG + chr3_1:61651894-61651913 None:intergenic 35.0%
TGATTGTGTATTGTGGAAGT+AGG - chr3_1:61652023-61652042 Msa0366700:CDS 35.0%
!! CTTATTGTTGTTTGATGACG+AGG - chr3_1:61652068-61652087 Msa0366700:intron 35.0%
!! TCCCTCTTAATTAAGTTGAC+TGG + chr3_1:61652483-61652502 None:intergenic 35.0%
AGGTGTAGCTCATTAACTAA+TGG + chr3_1:61652708-61652727 None:intergenic 35.0%
TCTAACCAAGAATTGAACTC+AGG + chr3_1:61652753-61652772 None:intergenic 35.0%
CTCATAACCGTAGATTACTA+GGG - chr3_1:61652783-61652802 Msa0366700:intron 35.0%
! GCTTGCAATTTTGCAAATAC+AGG + chr3_1:61652875-61652894 None:intergenic 35.0%
AAATTCCATCGTCAACAAAC+TGG - chr3_1:61653086-61653105 Msa0366700:intron 35.0%
AGAGTGTAACATTTGCAACA+AGG - chr3_1:61653115-61653134 Msa0366700:CDS 35.0%
CAAACAGATTTCAATGAGTG+AGG + chr3_1:61653194-61653213 None:intergenic 35.0%
TTCTTCCCATTTGTAACCTA+TGG - chr3_1:61653367-61653386 Msa0366700:CDS 35.0%
CACACTATTGCATACGATAT+TGG - chr3_1:61653493-61653512 Msa0366700:CDS 35.0%
ATAATCACGAAGGATAATCC+TGG + chr3_1:61653522-61653541 None:intergenic 35.0%
!!! GAAGCTTTTGCTTTAGAACT+TGG - chr3_1:61653859-61653878 Msa0366700:CDS 35.0%
!!! GCTTTTTTCGTAAGATCTCT+AGG + chr3_1:61654122-61654141 None:intergenic 35.0%
GAATACAGACTATGGACAAT+TGG - chr3_1:61654143-61654162 Msa0366700:intron 35.0%
GCTTATTTGAGCTTATCTAC+TGG + chr3_1:61654224-61654243 None:intergenic 35.0%
!!! TTATTTTGGGTCGATGAAAC+GGG + chr3_1:61654484-61654503 None:intergenic 35.0%
ATCGACCCAAAATAATGCAA+GGG - chr3_1:61654489-61654508 Msa0366700:intron 35.0%
AAAGTTAATGACTGAACAGG+CGG + chr3_1:61654727-61654746 None:intergenic 35.0%
GCAAAAGTTAATGACTGAAC+AGG + chr3_1:61654730-61654749 None:intergenic 35.0%
CCCAAACACATATTCAAAGA+CGG + chr3_1:61654814-61654833 None:intergenic 35.0%
CCGTCTTTGAATATGTGTTT+GGG - chr3_1:61654811-61654830 Msa0366700:intron 35.0%
TTCTATATTCATGGTAAGGC+CGG + chr3_1:61654968-61654987 None:intergenic 35.0%
! TAGATATTGGCCTAGGATTA+CGG - chr3_1:61655065-61655084 Msa0366700:intron 35.0%
CAGTGTTTATAATGAGCAAG+TGG + chr3_1:61655196-61655215 None:intergenic 35.0%
AAAAGGAAACACGGAAAACA+AGG + chr3_1:61655742-61655761 None:intergenic 35.0%
CGTGTCTTCAAGCTATAATT+TGG - chr3_1:61655833-61655852 Msa0366700:intron 35.0%
TGGACTTCTTACAAAATTGC+AGG - chr3_1:61655853-61655872 Msa0366700:intron 35.0%
ATTCATTACCCTTCACATCT+TGG + chr3_1:61655925-61655944 None:intergenic 35.0%
AAGATGTGAAGGGTAATGAA+TGG - chr3_1:61655924-61655943 Msa0366700:intron 35.0%
! TACATCCTGCTGTTGTTATT+AGG + chr3_1:61655971-61655990 None:intergenic 35.0%
ATACTGGTATGCATCAATCT+AGG - chr3_1:61656044-61656063 Msa0366700:intron 35.0%
TACTGGTATGCATCAATCTA+GGG - chr3_1:61656045-61656064 Msa0366700:intron 35.0%
CTCTCAAGTAAGAACAAATG+AGG + chr3_1:61656215-61656234 None:intergenic 35.0%
CTCATTTGTTCTTACTTGAG+AGG - chr3_1:61656213-61656232 Msa0366700:intron 35.0%
! CAAAACCATTTTACTGTCCA+TGG - chr3_1:61656383-61656402 Msa0366700:intron 35.0%
TCTACATCTGCACATTCTAA+TGG - chr3_1:61656487-61656506 Msa0366700:intron 35.0%
ATTCTCATTTCCACCAGAAA+AGG + chr3_1:61656533-61656552 None:intergenic 35.0%
TGGAAATGAGAATCTTCCAT+TGG - chr3_1:61656540-61656559 Msa0366700:intron 35.0%
GGAAATGAGAATCTTCCATT+GGG - chr3_1:61656541-61656560 Msa0366700:intron 35.0%
GATGATGAGCAATAATTCAC+TGG - chr3_1:61656687-61656706 Msa0366700:intron 35.0%
!! ATTCAGCTTTAGAGAAGAAG+AGG - chr3_1:61656719-61656738 Msa0366700:intron 35.0%
AAGAAGAGGACTCGAAATAT+TGG - chr3_1:61656733-61656752 Msa0366700:intron 35.0%
TATGGAGTTGAGACTTACAT+GGG - chr3_1:61656795-61656814 Msa0366700:intron 35.0%
TTGTTCTCTTTCCAAAAACC+GGG + chr3_1:61657069-61657088 None:intergenic 35.0%
TCTGCTTAAGCTTGTATATG+TGG - chr3_1:61657407-61657426 Msa0366700:intron 35.0%
!! TTATGAGTAAGCCGTTTTCA+CGG - chr3_1:61657477-61657496 Msa0366700:intron 35.0%
!! TTTTGAGAAAGCCGTGAAAA+CGG + chr3_1:61657491-61657510 None:intergenic 35.0%
! GTATGTTGACTATTTCATCC+AGG - chr3_1:61657649-61657668 Msa0366700:intron 35.0%
CTCTAAATGGAGAAAGTTAC+CGG - chr3_1:61657704-61657723 Msa0366700:intron 35.0%
! ACTGGTCTAAATTCCAAAAG+TGG + chr3_1:61657814-61657833 None:intergenic 35.0%
TCACTATCTCATATGAAGAC+TGG + chr3_1:61657832-61657851 None:intergenic 35.0%
! TTTGAAATCCAGCAAAGGTA+TGG - chr3_1:61657944-61657963 Msa0366700:intron 35.0%
GATCTTCATCTGTCATGTTT+AGG - chr3_1:61657989-61658008 Msa0366700:intron 35.0%
CTGTGAACACCAAATGTAAT+CGG + chr3_1:61658155-61658174 None:intergenic 35.0%
!! TCACAGATTTTAAGAAGCGA+CGG - chr3_1:61658169-61658188 Msa0366700:intron 35.0%
TTCTCCTAAAACAGCTAAAC+TGG + chr3_1:61658253-61658272 None:intergenic 35.0%
TTTCTTCTTGCGTAGCATAA+GGG + chr3_1:61658442-61658461 None:intergenic 35.0%
!!! GTGAATGTGTTCTTTTTTGG+CGG + chr3_1:61658493-61658512 None:intergenic 35.0%
ATCTTCACCATTAGATTGAG+TGG + chr3_1:61658787-61658806 None:intergenic 35.0%
! TTTTTCTTTGTTCTCAACGG+TGG + chr3_1:61658844-61658863 None:intergenic 35.0%
AGTCAAAAGAATCTGTCTTG+AGG - chr3_1:61658894-61658913 Msa0366700:intron 35.0%
AAGTGGGTATGGATTTGATG+AGG + chr3_1:61651156-61651175 None:intergenic 40.0%
AGAGAGAGAAAACGTGAAGT+GGG + chr3_1:61651172-61651191 None:intergenic 40.0%
TAGAGAGAGAAAACGTGAAG+TGG + chr3_1:61651173-61651192 None:intergenic 40.0%
GACCCATTATCCTAAATCCT+AGG - chr3_1:61651330-61651349 Msa0366700:CDS 40.0%
AACCAAGTCAAAGGTTGTCT+TGG - chr3_1:61651369-61651388 Msa0366700:CDS 40.0%
!! TGATTGATGGGTTCTGACAT+TGG - chr3_1:61651570-61651589 Msa0366700:CDS 40.0%
ATGGTTCGTGTGTTCATGAA+TGG - chr3_1:61651601-61651620 Msa0366700:CDS 40.0%
TTCATGAATGGAAGAAAGGG+TGG - chr3_1:61651613-61651632 Msa0366700:CDS 40.0%
TCATGAATGGAAGAAAGGGT+GGG - chr3_1:61651614-61651633 Msa0366700:CDS 40.0%
AAATCCCGGAATGGTAAGAA+AGG + chr3_1:61651841-61651860 None:intergenic 40.0%
CAAACACAACCAGAAAATCC+CGG + chr3_1:61651855-61651874 None:intergenic 40.0%
TGTATTGTGGAAGTAGGAGT+AGG - chr3_1:61652029-61652048 Msa0366700:intron 40.0%
TTTATGGAGGAATGGAAGAG+TGG - chr3_1:61652306-61652325 Msa0366700:CDS 40.0%
GATCACATATCACACACAAG+GGG + chr3_1:61652461-61652480 None:intergenic 40.0%
GGATCACATATCACACACAA+GGG + chr3_1:61652462-61652481 None:intergenic 40.0%
TGGATCACATATCACACACA+AGG + chr3_1:61652463-61652482 None:intergenic 40.0%
AATCAGTTGGTTAGGTAGAG+TGG + chr3_1:61652680-61652699 None:intergenic 40.0%
ACTAATGGAGCTCAATCAGT+TGG + chr3_1:61652693-61652712 None:intergenic 40.0%
GAGAACCTGAGTTCAATTCT+TGG - chr3_1:61652745-61652764 Msa0366700:intron 40.0%
CCTAGTAATCTACGGTTATG+AGG + chr3_1:61652785-61652804 None:intergenic 40.0%
CCTCATAACCGTAGATTACT+AGG - chr3_1:61652782-61652801 Msa0366700:intron 40.0%
AGAGAAGGAAGATATGAGCA+GGG + chr3_1:61652953-61652972 None:intergenic 40.0%
AAGAGAAGGAAGATATGAGC+AGG + chr3_1:61652954-61652973 None:intergenic 40.0%
CTGTTCGAGTATCTTGACTT+CGG - chr3_1:61653261-61653280 Msa0366700:intron 40.0%
ACGACTTGTCCTAATAAGTG+GGG + chr3_1:61653633-61653652 None:intergenic 40.0%
CACGACTTGTCCTAATAAGT+GGG + chr3_1:61653634-61653653 None:intergenic 40.0%
!!! CTTTAGAACTTGGCCCATTT+TGG - chr3_1:61653869-61653888 Msa0366700:CDS 40.0%
! AGAGCTTTATGTATAGGGAG+AGG - chr3_1:61653923-61653942 Msa0366700:intron 40.0%
! GAGCTTTATGTATAGGGAGA+GGG - chr3_1:61653924-61653943 Msa0366700:intron 40.0%
! AGCTTTATGTATAGGGAGAG+GGG - chr3_1:61653925-61653944 Msa0366700:intron 40.0%
! AATTATTGCTGCTTGCTCGT+TGG - chr3_1:61654278-61654297 Msa0366700:CDS 40.0%
TCTTTAGTTGCTCTTAGCCT+TGG - chr3_1:61654304-61654323 Msa0366700:CDS 40.0%
ACTGCACTAACAGAATACCA+AGG + chr3_1:61654324-61654343 None:intergenic 40.0%
CATCGACCCAAAATAATGCA+AGG - chr3_1:61654488-61654507 Msa0366700:intron 40.0%
TTATCGGAGCATGACTCATA+TGG + chr3_1:61654615-61654634 None:intergenic 40.0%
! ATGCTTTTAATCTCCCATGC+TGG + chr3_1:61654772-61654791 None:intergenic 40.0%
GCCGTCTTTGAATATGTGTT+TGG - chr3_1:61654810-61654829 Msa0366700:intron 40.0%
TATCTCCTCCCTTTCATCAA+GGG - chr3_1:61654905-61654924 Msa0366700:intron 40.0%
CTTCCCAAACTGTTAAAGAC+CGG - chr3_1:61654946-61654965 Msa0366700:intron 40.0%
TTTCTCAACCACGTATTGCT+CGG - chr3_1:61655004-61655023 Msa0366700:intron 40.0%
! TACTTCCTAGATATTGGCCT+AGG - chr3_1:61655058-61655077 Msa0366700:intron 40.0%
GTAATCCTAGGCCAATATCT+AGG + chr3_1:61655066-61655085 None:intergenic 40.0%
ACTAAGCTCAGAGTTAACCT+TGG - chr3_1:61655487-61655506 Msa0366700:CDS 40.0%
! AGTAGTGCCATTGTTTGAGA+AGG - chr3_1:61655625-61655644 Msa0366700:CDS 40.0%
! AAACCTCAGCACAAGCTTTT+GGG + chr3_1:61655694-61655713 None:intergenic 40.0%
CCTTCAGAGTGTGTAATATG+AGG + chr3_1:61655887-61655906 None:intergenic 40.0%
CCTCATATTACACACTCTGA+AGG - chr3_1:61655884-61655903 Msa0366700:intron 40.0%
TTTGGCCTAATAACAACAGC+AGG - chr3_1:61655963-61655982 Msa0366700:intron 40.0%
AATCCATGGCCTGTATACAA+GGG + chr3_1:61656012-61656031 None:intergenic 40.0%
AAATCCATGGCCTGTATACA+AGG + chr3_1:61656013-61656032 None:intergenic 40.0%
ACATTTAGTCGGATAGATCC+TGG - chr3_1:61656295-61656314 Msa0366700:intron 40.0%
CATTTAGTCGGATAGATCCT+GGG - chr3_1:61656296-61656315 Msa0366700:intron 40.0%
ATTTAGTCGGATAGATCCTG+GGG - chr3_1:61656297-61656316 Msa0366700:intron 40.0%
ATCAAATTCCGTAGACACAC+AGG - chr3_1:61656348-61656367 Msa0366700:intron 40.0%
ACATCTGCACATTCTAATGG+CGG - chr3_1:61656490-61656509 Msa0366700:intron 40.0%
! ATTTGGTGAACGGAGAAGAT+CGG + chr3_1:61656578-61656597 None:intergenic 40.0%
ACATCCTGAACCTTCACATT+TGG - chr3_1:61656624-61656643 Msa0366700:intron 40.0%
GTAACCAAATGTGAAGGTTC+AGG + chr3_1:61656631-61656650 None:intergenic 40.0%
GAACCTTCACATTTGGTTAC+TGG - chr3_1:61656631-61656650 Msa0366700:intron 40.0%
! GGTTTGCTTAAAGCCGAAAA+TGG - chr3_1:61656661-61656680 Msa0366700:intron 40.0%
CTATGGAGTTGAGACTTACA+TGG - chr3_1:61656794-61656813 Msa0366700:intron 40.0%
ACATTTCATTTAGGAACCCC+CGG - chr3_1:61657048-61657067 Msa0366700:intron 40.0%
TGTTCTCTTTCCAAAAACCG+GGG + chr3_1:61657068-61657087 None:intergenic 40.0%
CATCACACAACATAATCACG+CGG + chr3_1:61657521-61657540 None:intergenic 40.0%
AAGCTCTTTCAGACATTCCT+TGG - chr3_1:61657550-61657569 Msa0366700:intron 40.0%
! TTTTCCGAACATGTCCACTT+GGG + chr3_1:61657747-61657766 None:intergenic 40.0%
! ATTTTCCGAACATGTCCACT+TGG + chr3_1:61657748-61657767 None:intergenic 40.0%
GACATGTTCGGAAAATGTCT+GGG - chr3_1:61657752-61657771 Msa0366700:intron 40.0%
! AAAATGTCTGGGATACAAGC+AGG - chr3_1:61657763-61657782 Msa0366700:intron 40.0%
!!! TTTGGTGGACATGCTTTTTC+AGG - chr3_1:61657871-61657890 Msa0366700:intron 40.0%
GTTTCTTCTTGCGTAGCATA+AGG + chr3_1:61658443-61658462 None:intergenic 40.0%
TTCTCTTGATACTCCACCAT+TGG + chr3_1:61658538-61658557 None:intergenic 40.0%
AAGAGAAGTTGCGAATCCTT+TGG - chr3_1:61658551-61658570 Msa0366700:CDS 40.0%
! AATCCTTTGGAAAACGAAGG+AGG - chr3_1:61658564-61658583 Msa0366700:CDS 40.0%
AACGAAGGAGGACTAAATAG+AGG - chr3_1:61658576-61658595 Msa0366700:CDS 40.0%
ACTAAATAGAGGTCAAGTCG+AGG - chr3_1:61658587-61658606 Msa0366700:CDS 40.0%
GCAGGAAGTTCAACATTCTT+TGG - chr3_1:61658761-61658780 Msa0366700:intron 40.0%
TCTTTGGCCACTCAATCTAA+TGG - chr3_1:61658777-61658796 Msa0366700:intron 40.0%
GAGAAAACGTGAAGTGGGTA+TGG + chr3_1:61651167-61651186 None:intergenic 45.0%
TCACCCACAAAAGGAAACCT+AGG + chr3_1:61651350-61651369 None:intergenic 45.0%
!! TGACTTGGTTCACCCACAAA+AGG + chr3_1:61651359-61651378 None:intergenic 45.0%
TTGTGGGTGAACCAAGTCAA+AGG - chr3_1:61651360-61651379 Msa0366700:CDS 45.0%
CACCAAGACAACCTTTGACT+TGG + chr3_1:61651374-61651393 None:intergenic 45.0%
! GATGGGTTCTGACATTGGTA+TGG - chr3_1:61651575-61651594 Msa0366700:CDS 45.0%
CATGAATGGAAGAAAGGGTG+GGG - chr3_1:61651615-61651634 Msa0366700:CDS 45.0%
GCTCAACTTTGCTTCAAGTG+CGG - chr3_1:61651657-61651676 Msa0366700:CDS 45.0%
CTCAACTTTGCTTCAAGTGC+GGG - chr3_1:61651658-61651677 Msa0366700:CDS 45.0%
! CTTACCATTCCGGGATTTTC+TGG - chr3_1:61651843-61651862 Msa0366700:CDS 45.0%
ACAACCAGAAAATCCCGGAA+TGG + chr3_1:61651850-61651869 None:intergenic 45.0%
TGTGGAAGTAGGAGTAGGAA+TGG - chr3_1:61652034-61652053 Msa0366700:intron 45.0%
GTGGAAGTAGGAGTAGGAAT+GGG - chr3_1:61652035-61652054 Msa0366700:intron 45.0%
TGGAGCTCAATCAGTTGGTT+AGG + chr3_1:61652688-61652707 None:intergenic 45.0%
!! AAGGGTGCCCTAGTAATCTA+CGG + chr3_1:61652793-61652812 None:intergenic 45.0%
GTACACATTACAGAGCAGTG+TGG + chr3_1:61652852-61652871 None:intergenic 45.0%
GAGAAGGAAGATATGAGCAG+GGG + chr3_1:61652952-61652971 None:intergenic 45.0%
TCCATCGTCAACAAACTGGT+TGG - chr3_1:61653090-61653109 Msa0366700:intron 45.0%
TAGATACTACGCATCCACTG+TGG + chr3_1:61653236-61653255 None:intergenic 45.0%
TTCGAGTATCTTGACTTCGG+CGG - chr3_1:61653264-61653283 Msa0366700:intron 45.0%
TATCTTGACTTCGGCGGTAT+TGG - chr3_1:61653270-61653289 Msa0366700:intron 45.0%
ATCACGAAGGATAATCCTGG+TGG + chr3_1:61653519-61653538 None:intergenic 45.0%
TTGTCCTAATAAGTGGGGTC+GGG + chr3_1:61653628-61653647 None:intergenic 45.0%
CTTGTCCTAATAAGTGGGGT+CGG + chr3_1:61653629-61653648 None:intergenic 45.0%
CCACGACTTGTCCTAATAAG+TGG + chr3_1:61653635-61653654 None:intergenic 45.0%
CCACTTATTAGGACAAGTCG+TGG - chr3_1:61653632-61653651 Msa0366700:CDS 45.0%
CTTATTAGGACAAGTCGTGG+TGG - chr3_1:61653635-61653654 Msa0366700:CDS 45.0%
! TGGCTTTTGAATGTATGGGC+TGG - chr3_1:61653721-61653740 Msa0366700:intron 45.0%
! GGCTTTTGAATGTATGGGCT+GGG - chr3_1:61653722-61653741 Msa0366700:intron 45.0%
!! GCTTTTGAATGTATGGGCTG+GGG - chr3_1:61653723-61653742 Msa0366700:intron 45.0%
GCTTTATGTATAGGGAGAGG+GGG - chr3_1:61653926-61653945 Msa0366700:intron 45.0%
CTTTATGTATAGGGAGAGGG+GGG - chr3_1:61653927-61653946 Msa0366700:intron 45.0%
! TGGGTTGAGCTAAGGGTTAA+AGG - chr3_1:61653960-61653979 Msa0366700:intron 45.0%
GAGCTAAGGGTTAAAGGAGT+TGG - chr3_1:61653966-61653985 Msa0366700:intron 45.0%
CTAAGGGTTAAAGGAGTTGG+AGG - chr3_1:61653969-61653988 Msa0366700:intron 45.0%
!! CATTCCGCTCATTTTGACAG+CGG - chr3_1:61654517-61654536 Msa0366700:CDS 45.0%
AAGAAGTTAGGCCGTCATTC+AGG - chr3_1:61654668-61654687 Msa0366700:intron 45.0%
AGAAGTTAGGCCGTCATTCA+GGG - chr3_1:61654669-61654688 Msa0366700:intron 45.0%
GCATGCATGAATCAAATGCG+AGG - chr3_1:61654788-61654807 Msa0366700:intron 45.0%
AACAACTCTTTCCCACCATC+TGG - chr3_1:61654847-61654866 Msa0366700:intron 45.0%
ACTACAGACGGAAGACTTGA+GGG - chr3_1:61654877-61654896 Msa0366700:intron 45.0%
GTATCTCCTCCCTTTCATCA+AGG - chr3_1:61654904-61654923 Msa0366700:intron 45.0%
! GGAAGTATAGGACGAGATCT+CGG + chr3_1:61654931-61654950 None:intergenic 45.0%
AGGCCGGTCTTTAACAGTTT+GGG + chr3_1:61654952-61654971 None:intergenic 45.0%
AAGGCCGGTCTTTAACAGTT+TGG + chr3_1:61654953-61654972 None:intergenic 45.0%
GGGCAAGATCAAGATACTCT+AGG - chr3_1:61655148-61655167 Msa0366700:CDS 45.0%
CTCAAACAATGGCACTACTG+TGG + chr3_1:61655624-61655643 None:intergenic 45.0%
CTCAGCACCTTCTCAAACAA+TGG + chr3_1:61655635-61655654 None:intergenic 45.0%
! CAAACCTCAGCACAAGCTTT+TGG + chr3_1:61655695-61655714 None:intergenic 45.0%
! ACTCTGAAGGTCTTCCTTTG+CGG - chr3_1:61655897-61655916 Msa0366700:intron 45.0%
CAACAGCAGGATGTACGTAT+TGG - chr3_1:61655976-61655995 Msa0366700:intron 45.0%
AGCAGGATGTACGTATTGGA+GGG - chr3_1:61655980-61655999 Msa0366700:intron 45.0%
ATCCATGGCCTGTATACAAG+GGG + chr3_1:61656011-61656030 None:intergenic 45.0%
TTTAGTCGGATAGATCCTGG+GGG - chr3_1:61656298-61656317 Msa0366700:intron 45.0%
!! TCCTGGGGGAAAACTTGTTA+TGG - chr3_1:61656312-61656331 Msa0366700:intron 45.0%
!! CCTGGGGGAAAACTTGTTAT+GGG - chr3_1:61656313-61656332 Msa0366700:intron 45.0%
AATTCCGTAGACACACAGGT+TGG - chr3_1:61656352-61656371 Msa0366700:intron 45.0%
GTAACCAACCTGTGTGTCTA+CGG + chr3_1:61656359-61656378 None:intergenic 45.0%
TTCTAATGGCGGTTCTGCAA+AGG - chr3_1:61656501-61656520 Msa0366700:intron 45.0%
TCTAATGGCGGTTCTGCAAA+GGG - chr3_1:61656502-61656521 Msa0366700:intron 45.0%
! GCAAAGGGAGATACCTTTTC+TGG - chr3_1:61656517-61656536 Msa0366700:intron 45.0%
! AAGGGAGATACCTTTTCTGG+TGG - chr3_1:61656520-61656539 Msa0366700:intron 45.0%
TCGGCACAATTACTTCCCAA+TGG + chr3_1:61656559-61656578 None:intergenic 45.0%
GATCTTCTCCGTTCACCAAA+TGG - chr3_1:61656577-61656596 Msa0366700:intron 45.0%
CTCCGTTCACCAAATGGTAA+CGG - chr3_1:61656583-61656602 Msa0366700:intron 45.0%
TCCGTTCACCAAATGGTAAC+GGG - chr3_1:61656584-61656603 Msa0366700:intron 45.0%
GCTCCAGTAACCAAATGTGA+AGG + chr3_1:61656637-61656656 None:intergenic 45.0%
!! GCTCATCATCTCGCCATTTT+CGG + chr3_1:61656677-61656696 None:intergenic 45.0%
! ACAATGCTTGGCTTGACACT+GGG + chr3_1:61656850-61656869 None:intergenic 45.0%
TCCTCGATTGTGACAATGCT+TGG + chr3_1:61656862-61656881 None:intergenic 45.0%
! ATTTAGGAACCCCCGGTTTT+TGG - chr3_1:61657055-61657074 Msa0366700:intron 45.0%
GTTCTCTTTCCAAAAACCGG+GGG + chr3_1:61657067-61657086 None:intergenic 45.0%
ATATTCAGCGCCTCTTCATC+TGG - chr3_1:61657088-61657107 Msa0366700:CDS 45.0%
TATTCAGCGCCTCTTCATCT+GGG - chr3_1:61657089-61657108 Msa0366700:CDS 45.0%
GGACATGTTCGGAAAATGTC+TGG - chr3_1:61657751-61657770 Msa0366700:intron 45.0%
!! CTCGCCAGTTTAGCTGTTTT+AGG - chr3_1:61658246-61658265 Msa0366700:intron 45.0%
! GTGTCTAGGATGTTTAGTGG+TGG + chr3_1:61658310-61658329 None:intergenic 45.0%
! ACGGTGTCTAGGATGTTTAG+TGG + chr3_1:61658313-61658332 None:intergenic 45.0%
CAAACAATACAAGAGCAGCC+GGG + chr3_1:61658336-61658355 None:intergenic 45.0%
GCAAACAATACAAGAGCAGC+CGG + chr3_1:61658337-61658356 None:intergenic 45.0%
! TGTGTCTCCCTTTTCCACTT+GGG + chr3_1:61658368-61658387 None:intergenic 45.0%
! TTGTGTCTCCCTTTTCCACT+TGG + chr3_1:61658369-61658388 None:intergenic 45.0%
CACACGTTGCAAGTACATGT+TGG + chr3_1:61658393-61658412 None:intergenic 45.0%
!!! GGTTTTGAACCGACGTTTCA+CGG + chr3_1:61658421-61658440 None:intergenic 45.0%
ACGCAAGAAGAAACGCCAAT+CGG - chr3_1:61658449-61658468 Msa0366700:intron 45.0%
GTTGACGAGTCAGATACCAA+TGG - chr3_1:61658519-61658538 Msa0366700:intron 45.0%
! GCGAATCCTTTGGAAAACGA+AGG - chr3_1:61658561-61658580 Msa0366700:CDS 45.0%
! AGTCCTCCTTCGTTTTCCAA+AGG + chr3_1:61658570-61658589 None:intergenic 45.0%
AATAGAGGTCAAGTCGAGGT+TGG - chr3_1:61658591-61658610 Msa0366700:CDS 45.0%
TAGATCTATCTTTCCAGCGC+TGG + chr3_1:61658622-61658641 None:intergenic 45.0%
ACTTGCAAGTCATCGCGATT+GGG + chr3_1:61658654-61658673 None:intergenic 45.0%
!!! AATAAAATTACTTTTTTTTA+GGG + chr3_1:61652190-61652209 None:intergenic 5.0%
!!! AAATAAAATTACTTTTTTTT+AGG + chr3_1:61652191-61652210 None:intergenic 5.0%
!!! TTTTTATTATATATATCAAT+AGG + chr3_1:61654068-61654087 None:intergenic 5.0%
!!! AAAATATTTTACAAATTTTT+TGG - chr3_1:61657853-61657872 Msa0366700:intron 5.0%
AAAGGGTGGGGTTTACGATC+TGG - chr3_1:61651627-61651646 Msa0366700:CDS 50.0%
TGAACTCAGGTTCTCGCGAA+CGG + chr3_1:61652740-61652759 None:intergenic 50.0%
!! GCCAACCAGTTTGTTGACGA+TGG + chr3_1:61653094-61653113 None:intergenic 50.0%
ACTACGCATCCACTGTGGAT+AGG + chr3_1:61653231-61653250 None:intergenic 50.0%
TGCATACGATATTGGCCACC+AGG - chr3_1:61653501-61653520 Msa0366700:CDS 50.0%
TGTACCCGACCCCACTTATT+AGG - chr3_1:61653621-61653640 Msa0366700:CDS 50.0%
! AGCTCAACTGGGTTGAGCTA+AGG - chr3_1:61653952-61653971 Msa0366700:intron 50.0%
! GCTCAACTGGGTTGAGCTAA+GGG - chr3_1:61653953-61653972 Msa0366700:intron 50.0%
GTTAAAGGAGTTGGAGGTCC+TGG - chr3_1:61653975-61653994 Msa0366700:intron 50.0%
GTTATGTTCGGGCTTGAACC+AGG + chr3_1:61653996-61654015 None:intergenic 50.0%
GTCGATGAAACGGGCCATTT+AGG + chr3_1:61654475-61654494 None:intergenic 50.0%
CAGTCCGCTGTCAAAATGAG+CGG + chr3_1:61654524-61654543 None:intergenic 50.0%
TTAGGCCGTCATTCAGGGAA+GGG - chr3_1:61654674-61654693 Msa0366700:intron 50.0%
GTATCCCCTTCCCTGAATGA+CGG + chr3_1:61654682-61654701 None:intergenic 50.0%
TCATTCAGGGAAGGGGATAC+TGG - chr3_1:61654682-61654701 Msa0366700:intron 50.0%
ATGTGTTTGGGAAACCCGTC+AGG - chr3_1:61654823-61654842 Msa0366700:intron 50.0%
TGTGTTTGGGAAACCCGTCA+GGG - chr3_1:61654824-61654843 Msa0366700:intron 50.0%
GGAAAGAGTTGTTCCCTGAC+GGG + chr3_1:61654840-61654859 None:intergenic 50.0%
GGGAAAGAGTTGTTCCCTGA+CGG + chr3_1:61654841-61654860 None:intergenic 50.0%
AACTCTTTCCCACCATCTGG+TGG - chr3_1:61654850-61654869 Msa0366700:intron 50.0%
TAGTCTCTCCACCAGATGGT+GGG + chr3_1:61654861-61654880 None:intergenic 50.0%
TCTGTAGTCTCTCCACCAGA+TGG + chr3_1:61654865-61654884 None:intergenic 50.0%
TCTGGTGGAGAGACTACAGA+CGG - chr3_1:61654865-61654884 Msa0366700:intron 50.0%
GACTACAGACGGAAGACTTG+AGG - chr3_1:61654876-61654895 Msa0366700:intron 50.0%
GATCTCGGCCCTTGATGAAA+GGG + chr3_1:61654916-61654935 None:intergenic 50.0%
AGATCTCGGCCCTTGATGAA+AGG + chr3_1:61654917-61654936 None:intergenic 50.0%
GCAGGGATCAAGTTACTCCA+AGG + chr3_1:61655507-61655526 None:intergenic 50.0%
TCTCCCAAAAGCTTGTGCTG+AGG - chr3_1:61655688-61655707 Msa0366700:CDS 50.0%
! CTCTGAAGGTCTTCCTTTGC+GGG - chr3_1:61655898-61655917 Msa0366700:intron 50.0%
TTCACATCTTGGACCCGCAA+AGG + chr3_1:61655914-61655933 None:intergenic 50.0%
TTTGCGGGTCCAAGATGTGA+AGG - chr3_1:61655913-61655932 Msa0366700:intron 50.0%
TTGCGGGTCCAAGATGTGAA+GGG - chr3_1:61655914-61655933 Msa0366700:intron 50.0%
CAGCAGGATGTACGTATTGG+AGG - chr3_1:61655979-61655998 Msa0366700:intron 50.0%
! CCCATAACAAGTTTTCCCCC+AGG + chr3_1:61656316-61656335 None:intergenic 50.0%
! CCCCGTTACCATTTGGTGAA+CGG + chr3_1:61656588-61656607 None:intergenic 50.0%
! CCGTTCACCAAATGGTAACG+GGG - chr3_1:61656585-61656604 Msa0366700:intron 50.0%
CGAAGTTCCCCGTTACCATT+TGG + chr3_1:61656595-61656614 None:intergenic 50.0%
AACGGGGAACTTCGCTCAAA+TGG - chr3_1:61656601-61656620 Msa0366700:intron 50.0%
CATTTGGTTACTGGAGCTGC+TGG - chr3_1:61656640-61656659 Msa0366700:intron 50.0%
! GACAATGCTTGGCTTGACAC+TGG + chr3_1:61656851-61656870 None:intergenic 50.0%
! GCCAAGCATTGTCACAATCG+AGG - chr3_1:61656858-61656877 Msa0366700:intron 50.0%
GGACTCTTACCCAGATGAAG+AGG + chr3_1:61657101-61657120 None:intergenic 50.0%
CACAACATAATCACGCGGCA+CGG + chr3_1:61657516-61657535 None:intergenic 50.0%
GACTATTTCATCCAGGGCGA+AGG - chr3_1:61657656-61657675 Msa0366700:intron 50.0%
!! GGAGGAAGAAGAGCATCAAC+CGG + chr3_1:61657726-61657745 None:intergenic 50.0%
ATGCTCTTCTTCCTCCCAAG+TGG - chr3_1:61657730-61657749 Msa0366700:intron 50.0%
TCCTCCCAAGTGGACATGTT+CGG - chr3_1:61657740-61657759 Msa0366700:intron 50.0%
ACCAGACGAGCTGAGTTCAA+GGG - chr3_1:61657908-61657927 Msa0366700:intron 50.0%
CAGAAGGACCATACCTTTGC+TGG + chr3_1:61657955-61657974 None:intergenic 50.0%
ATCCAAGACCATGAGCCTTC+TGG - chr3_1:61658213-61658232 Msa0366700:intron 50.0%
AGGATGTTTAGTGGTGGCAC+CGG + chr3_1:61658304-61658323 None:intergenic 50.0%
AAACATCCTAGACACCGTCC+CGG - chr3_1:61658315-61658334 Msa0366700:intron 50.0%
ATTCAGCCCCCAAGTGGAAA+AGG - chr3_1:61658357-61658376 Msa0366700:intron 50.0%
TTCAGCCCCCAAGTGGAAAA+GGG - chr3_1:61658358-61658377 Msa0366700:intron 50.0%
! TGTCTCCCTTTTCCACTTGG+GGG + chr3_1:61658366-61658385 None:intergenic 50.0%
! GTGTCTCCCTTTTCCACTTG+GGG + chr3_1:61658367-61658386 None:intergenic 50.0%
TGTGTACGACCGTGAAACGT+CGG - chr3_1:61658409-61658428 Msa0366700:intron 50.0%
GACGAGTCAGATACCAATGG+TGG - chr3_1:61658522-61658541 Msa0366700:intron 50.0%
CACTTGCAAGTCATCGCGAT+TGG + chr3_1:61658655-61658674 None:intergenic 50.0%
! CAATCGCGATGACTTGCAAG+TGG - chr3_1:61658653-61658672 Msa0366700:intron 50.0%
! CTGTTCTTGGACCGCCATTT+TGG + chr3_1:61658728-61658747 None:intergenic 50.0%
GAACTCAGGTTCTCGCGAAC+GGG + chr3_1:61652739-61652758 None:intergenic 55.0%
GGCACCCTTCCTCTACGAAT+CGG - chr3_1:61652804-61652823 Msa0366700:intron 55.0%
ACCCTTCCTCTACGAATCGG+AGG - chr3_1:61652807-61652826 Msa0366700:intron 55.0%
! CCCTCCGATTCGTAGAGGAA+GGG + chr3_1:61652811-61652830 None:intergenic 55.0%
CCCTTCCTCTACGAATCGGA+GGG - chr3_1:61652808-61652827 Msa0366700:intron 55.0%
! ACCCTCCGATTCGTAGAGGA+AGG + chr3_1:61652812-61652831 None:intergenic 55.0%
! GCTAACCCTCCGATTCGTAG+AGG + chr3_1:61652816-61652835 None:intergenic 55.0%
GTTCTGCAGCCTATCCACAG+TGG - chr3_1:61653219-61653238 Msa0366700:intron 55.0%
AGAGGGGGGATAGCTCAACT+GGG - chr3_1:61653941-61653960 Msa0366700:intron 55.0%
GTTAGGCCGTCATTCAGGGA+AGG - chr3_1:61654673-61654692 Msa0366700:intron 55.0%
TAGGCCGTCATTCAGGGAAG+GGG - chr3_1:61654675-61654694 Msa0366700:intron 55.0%
GTAGTCTCTCCACCAGATGG+TGG + chr3_1:61654862-61654881 None:intergenic 55.0%
TTCTTACCCCTCCCATCACC+AGG + chr3_1:61655033-61655052 None:intergenic 55.0%
TTGGCCTAGGATTACGGACC+AGG - chr3_1:61655071-61655090 Msa0366700:intron 55.0%
AGCTCCTGGTCCGTAATCCT+AGG + chr3_1:61655078-61655097 None:intergenic 55.0%
TAGGATTACGGACCAGGAGC+TGG - chr3_1:61655077-61655096 Msa0366700:intron 55.0%
TGAGTGCCAGTGATGCAGGT+CGG - chr3_1:61655651-61655670 Msa0366700:CDS 55.0%
ACCAATCCGACCTGCATCAC+TGG + chr3_1:61655660-61655679 None:intergenic 55.0%
GGGTGTGACCCCTTGTATAC+AGG - chr3_1:61656000-61656019 Msa0366700:intron 55.0%
GACCCCTTGTATACAGGCCA+TGG - chr3_1:61656006-61656025 Msa0366700:intron 55.0%
! ATGCTTGGCTTGACACTGGG+CGG + chr3_1:61656847-61656866 None:intergenic 55.0%
ATCCAGGGCGAAGGAACAGT+GGG - chr3_1:61657665-61657684 Msa0366700:intron 55.0%
TCCGAACATGTCCACTTGGG+AGG + chr3_1:61657744-61657763 None:intergenic 55.0%
CACCAGACGAGCTGAGTTCA+AGG - chr3_1:61657907-61657926 Msa0366700:intron 55.0%
TCCCTTGAACTCAGCTCGTC+TGG + chr3_1:61657912-61657931 None:intergenic 55.0%
AGCCAGAAGGCTCATGGTCT+TGG + chr3_1:61658218-61658237 None:intergenic 55.0%
CGTCTAAGCCAGAAGGCTCA+TGG + chr3_1:61658224-61658243 None:intergenic 55.0%
CAATACAAGAGCAGCCGGGA+CGG + chr3_1:61658332-61658351 None:intergenic 55.0%
GTTTGCATTCAGCCCCCAAG+TGG - chr3_1:61658351-61658370 Msa0366700:intron 55.0%
CATCTGCTTCACGCTCCGAT+TGG + chr3_1:61658467-61658486 None:intergenic 55.0%
GGGTGGGGTTTACGATCTGG+TGG - chr3_1:61651630-61651649 Msa0366700:CDS 60.0%
! CTCGCGAACGGGTCGACTTT+AGG + chr3_1:61652728-61652747 None:intergenic 60.0%
GAGAGGGGGGATAGCTCAAC+TGG - chr3_1:61653940-61653959 Msa0366700:intron 60.0%
CTCGGCCCTTGATGAAAGGG+AGG + chr3_1:61654913-61654932 None:intergenic 60.0%
ATTGCTCGGCCTCCTGGTGA+TGG - chr3_1:61655018-61655037 Msa0366700:intron 60.0%
TTGCTCGGCCTCCTGGTGAT+GGG - chr3_1:61655019-61655038 Msa0366700:intron 60.0%
TTACCCCTCCCATCACCAGG+AGG + chr3_1:61655030-61655049 None:intergenic 60.0%
CAGACAAACGCTCCAGCTCC+TGG + chr3_1:61655092-61655111 None:intergenic 60.0%
! CAGGAGCTGGAGCGTTTGTC+TGG - chr3_1:61655090-61655109 Msa0366700:intron 60.0%
GTGCTGAGTGCCAGTGATGC+AGG - chr3_1:61655647-61655666 Msa0366700:CDS 60.0%
GCCAGTGATGCAGGTCGGAT+TGG - chr3_1:61655656-61655675 Msa0366700:CDS 60.0%
CATCCAGGGCGAAGGAACAG+TGG - chr3_1:61657664-61657683 Msa0366700:intron 60.0%
!! GCGAGAGCGTCTAAGCCAGA+AGG + chr3_1:61658231-61658250 None:intergenic 60.0%
!! GGACCTGCTGATTCCTCAGC+CGG - chr3_1:61658282-61658301 Msa0366700:intron 60.0%
!! TTTAGTGGTGGCACCGGCTG+AGG + chr3_1:61658298-61658317 None:intergenic 60.0%
CCAGGAGGCCGAGCAATACG+TGG + chr3_1:61655015-61655034 None:intergenic 65.0%
CCACGTATTGCTCGGCCTCC+TGG - chr3_1:61655012-61655031 Msa0366700:intron 65.0%
!! TCGGCCTCCTGGTGATGGGA+GGG - chr3_1:61655023-61655042 Msa0366700:intron 65.0%
! CTTGGCTTGACACTGGGCGG+TGG + chr3_1:61656844-61656863 None:intergenic 65.0%
AGCCCACTGTTCCTTCGCCC+TGG + chr3_1:61657670-61657689 None:intergenic 65.0%
!! GCACCGGCTGAGGAATCAGC+AGG + chr3_1:61658288-61658307 None:intergenic 65.0%
!! GAGGTTGGTGAGTCCAGCGC+TGG - chr3_1:61658606-61658625 Msa0366700:CDS 65.0%
!! CTCGGCCTCCTGGTGATGGG+AGG - chr3_1:61655022-61655041 Msa0366700:intron 70.0%
!! CGGCCTCCTGGTGATGGGAG+GGG - chr3_1:61655024-61655043 Msa0366700:intron 70.0%
GAGCAGCCGGGACGGTGTCT+AGG + chr3_1:61658324-61658343 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 61651040 61659179 61651040 ID=Msa0366700;Name=Msa0366700
chr3_1 mRNA 61651040 61659179 61651040 ID=Msa0366700-mRNA-1;Parent=Msa0366700;Name=Msa0366700-mRNA-1;_AED=0.08;_eAED=0.08;_QI=184|0.91|1|1|0.91|0.84|13|265|897
chr3_1 exon 61651040 61652044 61651040 ID=Msa0366700-mRNA-1:exon:11958;Parent=Msa0366700-mRNA-1
chr3_1 exon 61652259 61652326 61652259 ID=Msa0366700-mRNA-1:exon:11957;Parent=Msa0366700-mRNA-1
chr3_1 exon 61652435 61652548 61652435 ID=Msa0366700-mRNA-1:exon:11956;Parent=Msa0366700-mRNA-1
chr3_1 exon 61653109 61653158 61653109 ID=Msa0366700-mRNA-1:exon:11955;Parent=Msa0366700-mRNA-1
chr3_1 exon 61653316 61653738 61653316 ID=Msa0366700-mRNA-1:exon:11954;Parent=Msa0366700-mRNA-1
chr3_1 exon 61653850 61653926 61653850 ID=Msa0366700-mRNA-1:exon:11953;Parent=Msa0366700-mRNA-1
chr3_1 exon 61654170 61654344 61654170 ID=Msa0366700-mRNA-1:exon:11952;Parent=Msa0366700-mRNA-1
chr3_1 exon 61654510 61654606 61654510 ID=Msa0366700-mRNA-1:exon:11951;Parent=Msa0366700-mRNA-1
chr3_1 exon 61655104 61655765 61655104 ID=Msa0366700-mRNA-1:exon:11950;Parent=Msa0366700-mRNA-1
chr3_1 exon 61656890 61656991 61656890 ID=Msa0366700-mRNA-1:exon:11949;Parent=Msa0366700-mRNA-1
chr3_1 exon 61657083 61657164 61657083 ID=Msa0366700-mRNA-1:exon:11948;Parent=Msa0366700-mRNA-1
chr3_1 exon 61658540 61658665 61658540 ID=Msa0366700-mRNA-1:exon:11947;Parent=Msa0366700-mRNA-1
chr3_1 exon 61659018 61659179 61659018 ID=Msa0366700-mRNA-1:exon:11946;Parent=Msa0366700-mRNA-1
chr3_1 five_prime_UTR 61659018 61659179 61659018 ID=Msa0366700-mRNA-1:five_prime_utr;Parent=Msa0366700-mRNA-1
chr3_1 five_prime_UTR 61658644 61658665 61658644 ID=Msa0366700-mRNA-1:five_prime_utr;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61658540 61658643 61658540 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61657083 61657164 61657083 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61656890 61656991 61656890 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61655104 61655765 61655104 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61654510 61654606 61654510 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61654170 61654344 61654170 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61653850 61653926 61653850 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61653316 61653738 61653316 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61653109 61653158 61653109 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61652435 61652548 61652435 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61652259 61652326 61652259 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 CDS 61651305 61652044 61651305 ID=Msa0366700-mRNA-1:cds;Parent=Msa0366700-mRNA-1
chr3_1 three_prime_UTR 61651040 61651304 61651040 ID=Msa0366700-mRNA-1:three_prime_utr;Parent=Msa0366700-mRNA-1
Gene Sequence

>Msa0366700

ATGGGTTCTGACATTGGTATGGTAAATGGTTCGTGTGTTCATGAATGGAAGAAAGGGTGGGGTTTACGATCTGGTGGATTTGCTCAACTTTGCTTCAAGTGCGGATCTTCCTTTGAGAGTTCAGTTTTTTGTAATAAATTCCATCGTCAACAAACTGGTTGGCGAGAGTGTAACATTTGCAACAAGCCTATCCACAGTGGATGCGTAGTATCTAAATCTCTGTTCGAGTATCTTGACTTCGGCGGTATTGGTTGTGTTAGCTGTGTAAATACTTCCCAACTAAATATGATTCGTAATACTGAAAATCCTAAATGGCCCGTTTCATCGACCCAAAATAATGCAAGGGATATTCATTCCGCTCATTTTGACAGCGGACTGTTTATGAGTAATGTTGATGAAGGAAAGCTTATGCAATTATGCAGAGTTGTTGAAGCTAGTGAATCTATCCATATGAGTCATGCTCCGATAAACAACATGATTACATCTAATGGGAAAAACAATCAAGAAGTTAGGCCGTCATTCAGGGAAGGGGATACTGGATTTTCAAATGTGATTAAACCGCCTGTTCAGTCATTAACTTTTGCCACGTTAGAAAATAATAGACCAGCATGGGAGATTAAAAGCATGCATGAATCAAATGCGAGGCCGTCTTTGAATATGTGTTTGGGAAACCCGTCAGGGAACAACTCTTTCCCACCATCTGGTGGAGAGACTACAGACGGAAGACTTGAGGGAAAAGTATCTCCTCCCTTTCATCAAGGGCCGAGATCTCGTCCTATACTTCCCAAACTGTTAAAGACCGGCCTTACCATGAATATAGAAACTGAAAAAGGGACACTTTCTCAACCACGTATTGCTCGGCCTCCTGGTGATGGGAGGGGTAAGAATCAGTTACTTCCTAGATATTGGCCTAGGATTACGGACCAGGAGCTGGAGCGTTTGTCTGGAGATTTGAAGTCCACAGTAGTGCCATTGTTTGAGAAGGTGCTGAGTGCCAGTGATGCAGGTCGGATTGGTCGTCTTGTTCTCCCAAAAGCTTGTGCTGAGGCATATTTTCCTCATATTACACACTCTGAAGGTCTTCCTTTGCGGGTCCAAGATGTGAAGGGTAATGAATGGACTTTTCAATTCAGATTTTGGCCTAATAACAACAGCAGGATGTACGTATTGGAGGGTGTGACCCCTTGTATACAGGCCATGGATTTACGTGCTGGTGATACTGTTACATTTAGTCGGATAGATCCTGGGGGAAAACTTGTTATGGGTTTCAGAAAGTCATCAAATTCCGTAGACACACAGGATGCTTCTACATCTGCACATTCTAATGGCGGTTCTGCAAAGGGAGATACCTTTTCTGGTGGAAATGAGAATCTTCCATTGGGAAGTAATTGTGCCGATCTTCTCCGTTCACCAAATGGTAACGGGGAACTTCGCTCAAATGGACATCCTGAACCTTCACATTTGGTTACTGGAGCTGCTGGTTTGCTTAAAGCCGAAAATGGCGAGATGATGAGCAATAATTCACTGGACCAAAAAAATTCAGCTTTAGAGAAGAAGAGGACTCGAAATATTGGCCTCAAAAGTAAGAGATTGCTTATTGGTAATGATGATTCTATGGAGTTGAGACTTACATGGGAAGAAGCACAAGATTTGCTTCGTCCACCGCCCAGTGTCAAGCCAAGCATTGTCACAATCGAGGATCAAGTATTTGAAGAATATGATGAACCCCCGGTTTTTGGAAAGAGAACAATATTCAGCGCCTCTTCATCTGGGGCGAAGGAACAGTGGGCTCAATGTGATGATTGCTCTAAATGGAGAAAGTTACCGGTTGATGCTCTTCTTCCTCCCAAGTGGACATGTTCGGAAAATGTCTGGGATACAAGCAGGTCTTCATGTTCTGCACCAGACGAGCTGAGTTCAAGGGAATTAGAAAATCTTTTGAAATCCAGCAAAGATTTTAAGAAGCGACGGATTGTAGAAAACAGCAAGTTGATCCAAGACCATGAGCCTTCTGGCTTAGACGCTCTCGCCAGTTTAGCTGTTTTAGGAGAAAATCTCTTGGGACCTGCTGATTCCTCAGCCGGTGCCACCACTAAACATCCTAGACACCGTCCCGGCTGCTCTTGTATTGTTTGCATTCAGCCCCCAAGTGGAAAAGGGAGACACAAGCCAACATGTACTTGCAACGTGTGTACGACCGTGAAACGTCGGTTCAAAACCCTTATGCTACGCAAGAAGAAACGCCAATCGGAGCGTGAAGCAGATGCTGCCGCCAAAAAAGAACACATTCACAACAGAGTTGACGAGTCAGATACCAATGGTGGAGTATCAAGAGAAGTTGCGAATCCTTTGGAAAACGAAGGAGGACTAAATAGAGGTCAAGTCGAGGTTGGTGAGTCCAGCGCTGGAAAGATAGATCTAAATTGTCATCCCAATCGCGATGACTTGCAAGTGGATAATGTCGCAAAACTTAGTGATCATATATGGGAACATATTAATATGAACCAAAATGGCGGTCCAAGAACAGTTAATACTGAAATGCAGGAAGTTCAACATTCTTTGGCCACTCAATCTAATGGTGAAGATACGAGATACTTGTCTGATGAAAGATGCATCGCATCCACCGTTGAGAACAAAGAAAAAAGAGATGATGTATTAAGTCATTCAAATGAAAGTCAAAAGAATCTGTCTTGA
Protein sequence

>Msa0366700

MGSDIGMVNGSCVHEWKKGWGLRSGGFAQLCFKCGSSFESSVFCNKFHRQQTGWRECNICNKPIHSGCVVSKSLFEYLDFGGIGCVSCVNTSQLNMIRNTENPKWPVSSTQNNARDIHSAHFDSGLFMSNVDEGKLMQLCRVVEASESIHMSHAPINNMITSNGKNNQEVRPSFREGDTGFSNVIKPPVQSLTFATLENNRPAWEIKSMHESNARPSLNMCLGNPSGNNSFPPSGGETTDGRLEGKVSPPFHQGPRSRPILPKLLKTGLTMNIETEKGTLSQPRIARPPGDGRGKNQLLPRYWPRITDQELERLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPHITHSEGLPLRVQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQAMDLRAGDTVTFSRIDPGGKLVMGFRKSSNSVDTQDASTSAHSNGGSAKGDTFSGGNENLPLGSNCADLLRSPNGNGELRSNGHPEPSHLVTGAAGLLKAENGEMMSNNSLDQKNSALEKKRTRNIGLKSKRLLIGNDDSMELRLTWEEAQDLLRPPPSVKPSIVTIEDQVFEEYDEPPVFGKRTIFSASSSGAKEQWAQCDDCSKWRKLPVDALLPPKWTCSENVWDTSRSSCSAPDELSSRELENLLKSSKDFKKRRIVENSKLIQDHEPSGLDALASLAVLGENLLGPADSSAGATTKHPRHRPGCSCIVCIQPPSGKGRHKPTCTCNVCTTVKRRFKTLMLRKKKRQSEREADAAAKKEHIHNRVDESDTNGGVSREVANPLENEGGLNRGQVEVGESSAGKIDLNCHPNRDDLQVDNVAKLSDHIWEHINMNQNGGPRTVNTEMQEVQHSLATQSNGEDTRYLSDERCIASTVENKEKRDDVLSHSNESQKNLS*