AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0367810

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0367810 MtrunA17_Chr3g0109821 96.582 673 22 1 1 673 1 672 0.0 1369
Msa0367810 MtrunA17_Chr5g0433781 62.963 675 211 19 1 668 1 643 0.0 806
Msa0367810 MtrunA17_Chr2g0309891 50.637 314 133 7 1 300 1 306 2.58e-90 285
Msa0367810 MtrunA17_Chr6g0481091 75.309 162 39 1 1 162 1 161 4.61e-89 277
Msa0367810 MtrunA17_Chr5g0400461 64.634 164 47 2 1 157 1 160 2.13e-70 232
Msa0367810 MtrunA17_Chr4g0054791 53.368 193 75 4 1 180 1 191 3.86e-64 215
Msa0367810 MtrunA17_Chr8g0372121 47.619 189 89 3 1 188 1 180 2.31e-59 202
Msa0367810 MtrunA17_Chr1g0201021 60.494 162 62 2 8 169 21 180 5.11e-59 208
Msa0367810 MtrunA17_Chr5g0428991 62.500 152 56 1 6 157 25 175 1.81e-58 208
Msa0367810 MtrunA17_Chr3g0128151 62.092 153 57 1 5 157 21 172 1.88e-58 207
Msa0367810 MtrunA17_Chr3g0092671 60.123 163 61 3 8 169 7 166 1.28e-57 204
Msa0367810 MtrunA17_Chr4g0018391 54.902 153 65 2 6 157 7 156 1.68e-57 198
Msa0367810 MtrunA17_Chr3g0128111 58.667 150 61 1 9 158 45 193 3.72e-57 194
Msa0367810 MtrunA17_Chr2g0318081 56.604 159 66 2 1 159 11 166 4.33e-57 197
Msa0367810 MtrunA17_Chr1g0197361 58.896 163 63 3 8 169 10 169 1.64e-56 202
Msa0367810 MtrunA17_Chr4g0056541 51.829 164 73 3 6 167 7 166 2.47e-56 195
Msa0367810 MtrunA17_Chr1g0197351 58.721 172 65 2 4 170 40 210 2.70e-56 199
Msa0367810 MtrunA17_Chr1g0200561 55.484 155 65 2 6 159 19 170 4.10e-56 194
Msa0367810 MtrunA17_Chr3g0124761 53.409 176 77 3 4 177 5 177 8.37e-56 191
Msa0367810 MtrunA17_Chr5g0405211 53.205 156 69 2 6 160 8 160 1.16e-55 193
Msa0367810 MtrunA17_Chr3g0130101 55.215 163 69 3 8 169 9 168 1.29e-55 193
Msa0367810 MtrunA17_Chr2g0309331 53.846 156 67 3 4 157 8 160 1.37e-55 192
Msa0367810 MtrunA17_Chr8g0359921 56.875 160 66 2 1 159 9 166 1.91e-55 192
Msa0367810 MtrunA17_Chr4g0017921 48.128 187 88 5 5 188 7 187 2.75e-55 192
Msa0367810 MtrunA17_Chr7g0214071 57.988 169 60 5 4 170 13 172 6.01e-55 188
Msa0367810 MtrunA17_Chr5g0398971 54.839 155 64 4 6 157 7 158 1.13e-54 190
Msa0367810 MtrunA17_Chr6g0484441 56.442 163 64 3 6 168 5 160 1.23e-54 189
Msa0367810 MtrunA17_Chr2g0318101 54.545 165 61 3 6 158 15 177 5.56e-54 189
Msa0367810 MtrunA17_Chr8g0364791 52.071 169 79 2 1 169 1 167 1.03e-53 191
Msa0367810 MtrunA17_Chr4g0060931 54.430 158 69 2 4 160 15 170 1.60e-53 187
Msa0367810 MtrunA17_Chr6g0453451 55.128 156 67 2 6 160 20 173 2.16e-53 186
Msa0367810 MtrunA17_Chr4g0042561 52.830 159 70 3 2 157 5 161 2.89e-53 184
Msa0367810 MtrunA17_Chr8g0384721 45.833 216 94 6 4 199 5 217 5.41e-53 184
Msa0367810 MtrunA17_Chr5g0417791 53.125 160 70 4 4 160 1 158 5.54e-53 183
Msa0367810 MtrunA17_Chr8g0346001 49.693 163 69 3 6 157 15 175 1.64e-52 187
Msa0367810 MtrunA17_Chr3g0091921 50.000 184 84 3 6 188 16 192 1.82e-52 183
Msa0367810 MtrunA17_Chr7g0252971 51.765 170 62 4 4 158 6 170 4.55e-52 183
Msa0367810 MtrunA17_Chr6g0461661 50.898 167 75 4 3 165 15 178 5.45e-52 184
Msa0367810 MtrunA17_Chr1g0147421 55.414 157 62 4 5 158 26 177 6.99e-52 183
Msa0367810 MtrunA17_Chr2g0316971 57.692 156 61 4 6 158 23 176 8.42e-52 184
Msa0367810 MtrunA17_Chr3g0130731 54.375 160 68 3 4 161 5 161 2.58e-51 179
Msa0367810 MtrunA17_Chr3g0139331 50.838 179 76 4 5 181 10 178 2.85e-51 181
Msa0367810 MtrunA17_Chr6g0453131 49.398 166 73 3 6 162 15 178 8.21e-51 181
Msa0367810 MtrunA17_Chr7g0253011 41.667 240 113 6 4 236 15 234 2.00e-50 180
Msa0367810 MtrunA17_Chr8g0384201 49.112 169 84 2 1 169 1 167 2.41e-50 182
Msa0367810 MtrunA17_Chr2g0312321 51.163 172 77 3 1 169 6 173 2.99e-50 177
Msa0367810 MtrunA17_Chr4g0076731 52.597 154 67 3 8 160 56 204 4.83e-50 180
Msa0367810 MtrunA17_Chr1g0183741 54.487 156 62 3 4 157 8 156 6.93e-50 175
Msa0367810 MtrunA17_Chr4g0047841 48.168 191 70 5 6 169 15 203 1.53e-49 176
Msa0367810 MtrunA17_Chr7g0261411 54.545 154 61 3 4 155 8 154 6.54e-49 173
Msa0367810 MtrunA17_Chr8g0361731 44.041 193 85 5 8 179 16 206 3.17e-48 174
Msa0367810 MtrunA17_Chr7g0263931 49.686 159 73 5 4 157 9 165 4.22e-48 172
Msa0367810 MtrunA17_Chr2g0326361 51.266 158 70 4 5 157 13 168 6.34e-48 171
Msa0367810 MtrunA17_Chr5g0417001 43.915 189 92 6 8 184 16 202 8.80e-48 173
Msa0367810 MtrunA17_Chr7g0217721 54.962 131 57 1 4 134 17 145 1.53e-44 163
Msa0367810 MtrunA17_Chr3g0144271 59.542 131 48 4 6 133 23 151 4.24e-44 164
Msa0367810 MtrunA17_Chr2g0311651 47.879 165 71 4 8 158 24 187 4.80e-44 160
Msa0367810 MtrunA17_Chr2g0311661 42.132 197 94 4 8 190 23 213 1.40e-43 158
Msa0367810 MtrunA17_Chr4g0038751 46.341 164 75 4 8 168 17 170 6.06e-43 157
Msa0367810 MtrunA17_Chr5g0442771 48.447 161 70 4 8 157 20 178 8.47e-43 157
Msa0367810 MtrunA17_Chr7g0217711 53.435 131 59 1 4 134 17 145 1.53e-42 151
Msa0367810 MtrunA17_Chr8g0345671 45.405 185 85 5 6 184 11 185 5.85e-41 154
Msa0367810 MtrunA17_Chr8g0385991 49.677 155 68 3 6 154 14 164 7.70e-41 149
Msa0367810 MtrunA17_Chr8g0345691 45.109 184 91 4 6 186 12 188 2.27e-38 147
Msa0367810 MtrunA17_Chr3g0131911 47.826 161 71 4 6 157 14 170 8.77e-38 140
Msa0367810 MtrunA17_Chr2g0321741 49.612 129 56 2 26 154 12 131 1.61e-37 143
Msa0367810 MtrunA17_Chr4g0026141 33.333 249 146 7 6 236 5 251 1.23e-35 135
Msa0367810 MtrunA17_Chr8g0345711 50.000 130 59 4 6 131 12 139 1.34e-35 132
Msa0367810 MtrunA17_Chr2g0321631 41.772 158 81 5 7 155 5 160 2.52e-34 131
Msa0367810 MtrunA17_Chr7g0266701 35.961 203 110 8 6 190 4 204 3.37e-34 131
Msa0367810 MtrunA17_Chr8g0345731 41.139 158 78 5 6 157 24 172 1.06e-31 121
Msa0367810 MtrunA17_Chr3g0113001 45.736 129 61 2 61 187 18 139 2.35e-30 121
Msa0367810 MtrunA17_Chr4g0050701 43.846 130 61 3 6 133 11 130 2.57e-29 115
Msa0367810 MtrunA17_Chr8g0345721 38.690 168 64 6 1 131 26 191 8.26e-28 111
Msa0367810 MtrunA17_Chr8g0345741 45.378 119 61 3 17 132 2 119 1.16e-27 109
Msa0367810 MtrunA17_Chr8g0345701 41.781 146 65 5 4 132 5 147 8.48e-27 107
Msa0367810 MtrunA17_Chr7g0243371 50.000 108 51 3 56 161 12 118 2.86e-26 103
Msa0367810 MtrunA17_Chr3g0113031 48.039 102 50 1 71 169 3 104 2.89e-25 105
Msa0367810 MtrunA17_Chr8g0384351 37.662 154 73 6 4 157 8 138 1.30e-20 90.1
Msa0367810 MtrunA17_Chr3g0130321 30.556 180 106 5 4 172 5 176 2.73e-19 87.0
Msa0367810 MtrunA17_Chr7g0251651 34.884 129 80 3 4 131 16 141 1.68e-18 84.3
Msa0367810 MtrunA17_Chr7g0251661 33.588 131 83 3 2 131 6 133 5.02e-17 79.0
Msa0367810 MtrunA17_Chr7g0251671 32.283 127 82 3 6 131 10 133 3.86e-15 73.6
Msa0367810 MtrunA17_Chr3g0113011 52.941 51 24 0 4 54 17 67 1.39e-13 66.2
Msa0367810 MtrunA17_Chr1g0194791 58.696 46 18 1 8 52 48 93 2.28e-12 63.9
Msa0367810 MtrunA17_Chr3g0113041 48.148 54 28 0 4 57 17 70 3.22e-12 62.4
Msa0367810 MtrunA17_Chr7g0274971 31.250 160 91 9 12 161 11 161 3.63e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0367810 AT1G65910.1 43.860 684 308 22 1 664 1 628 4.93e-165 488
Msa0367810 AT5G17260.1 40.000 575 207 20 1 563 1 449 1.87e-120 368
Msa0367810 AT3G03200.1 40.000 550 204 16 1 540 1 434 1.76e-113 350
Msa0367810 AT3G17730.1 76.543 162 37 1 1 162 1 161 3.07e-91 284
Msa0367810 AT1G54330.1 72.892 166 41 1 1 166 1 162 1.61e-81 260
Msa0367810 AT4G17980.2 64.375 160 54 2 1 157 1 160 3.29e-68 225
Msa0367810 AT4G17980.1 64.375 160 54 2 1 157 1 160 3.74e-68 224
Msa0367810 AT5G46590.1 59.006 161 65 1 1 160 1 161 1.04e-66 221
Msa0367810 AT5G04410.1 63.473 167 57 3 4 169 7 170 1.06e-63 221
Msa0367810 AT3G10500.1 62.651 166 60 2 4 169 7 170 1.63e-63 220
Msa0367810 AT1G32510.1 54.839 186 70 2 1 172 1 186 2.02e-63 212
Msa0367810 AT3G10480.1 59.412 170 68 1 1 170 22 190 2.92e-62 214
Msa0367810 AT5G46590.2 62.500 144 49 2 1 143 1 140 2.97e-62 209
Msa0367810 AT1G33060.1 60.784 153 59 1 5 157 23 174 1.60e-61 217
Msa0367810 AT1G33060.2 60.784 153 59 1 5 157 23 174 1.79e-61 217
Msa0367810 AT3G10490.1 59.639 166 66 1 5 170 26 190 3.05e-61 204
Msa0367810 AT1G34190.1 60.000 165 58 3 8 169 18 177 5.52e-61 214
Msa0367810 AT4G35580.3 61.438 153 58 1 5 157 8 159 1.08e-60 212
Msa0367810 AT4G35580.2 61.438 153 58 1 5 157 8 159 1.20e-60 212
Msa0367810 AT4G35580.1 61.438 153 58 1 5 157 8 159 1.26e-60 211
Msa0367810 AT3G10480.2 58.824 170 68 2 1 170 22 189 3.35e-60 209
Msa0367810 AT3G10490.2 59.281 167 67 1 4 170 25 190 1.76e-59 207
Msa0367810 AT4G27410.2 58.491 159 63 2 1 159 9 164 4.66e-59 201
Msa0367810 AT4G10350.1 50.526 190 88 5 6 192 9 195 1.82e-58 201
Msa0367810 AT1G34180.3 57.576 165 62 3 8 169 18 177 2.08e-58 204
Msa0367810 AT1G33280.1 54.118 170 71 4 6 174 8 171 3.66e-58 199
Msa0367810 AT3G18400.1 56.774 155 63 2 6 160 5 155 1.94e-57 197
Msa0367810 AT1G34180.1 57.576 165 62 3 8 169 18 177 2.05e-57 204
Msa0367810 AT3G15500.1 59.119 159 62 2 1 159 9 164 2.07e-57 197
Msa0367810 AT5G24590.2 54.938 162 71 2 1 161 8 168 4.89e-57 200
Msa0367810 AT5G66300.1 54.321 162 71 2 4 164 10 169 8.05e-57 195
Msa0367810 AT3G10480.3 50.246 203 67 2 1 170 22 223 8.14e-57 201
Msa0367810 AT1G52890.1 52.514 179 82 2 1 179 9 184 1.12e-56 195
Msa0367810 AT1G12260.2 50.307 163 77 2 6 167 7 166 1.26e-56 196
Msa0367810 AT2G18060.3 50.588 170 80 2 1 169 4 170 2.40e-56 196
Msa0367810 AT2G18060.1 50.588 170 80 2 1 169 4 170 2.40e-56 196
Msa0367810 AT1G12260.1 50.307 163 77 2 6 167 7 166 2.48e-56 197
Msa0367810 AT2G24430.2 58.974 156 58 3 5 158 15 166 6.80e-56 193
Msa0367810 AT2G24430.1 58.974 156 58 3 5 158 15 166 6.80e-56 193
Msa0367810 AT4G27410.3 53.409 176 62 3 1 159 9 181 8.48e-56 192
Msa0367810 AT1G71930.2 47.000 200 98 4 5 203 8 200 9.71e-56 193
Msa0367810 AT1G71930.1 47.000 200 98 4 5 203 8 200 9.71e-56 193
Msa0367810 AT1G62700.1 49.419 172 83 2 6 176 7 175 1.24e-55 195
Msa0367810 AT1G62700.2 49.419 172 83 2 6 176 7 175 1.24e-55 195
Msa0367810 AT5G39610.1 44.068 236 124 5 4 238 18 246 2.27e-55 191
Msa0367810 AT1G34180.4 53.672 177 62 4 8 169 18 189 3.04e-55 196
Msa0367810 AT4G36160.1 52.903 155 69 2 4 157 8 159 3.41e-55 193
Msa0367810 AT4G36160.3 52.903 155 69 2 4 157 8 159 3.41e-55 193
Msa0367810 AT4G36160.2 52.903 155 69 2 4 157 12 163 3.63e-55 193
Msa0367810 AT1G34180.2 53.672 177 62 4 8 169 18 189 2.11e-54 196
Msa0367810 AT5G64060.1 51.479 169 80 2 1 169 1 167 2.23e-54 190
Msa0367810 AT3G49530.2 53.797 158 71 2 5 161 12 168 3.19e-54 191
Msa0367810 AT3G49530.1 53.797 158 71 2 5 161 12 168 7.00e-54 192
Msa0367810 AT3G04070.2 52.000 175 69 5 5 166 9 181 1.08e-53 188
Msa0367810 AT5G62380.2 53.548 155 64 3 6 157 7 156 1.30e-53 188
Msa0367810 AT5G62380.1 53.548 155 64 3 6 157 7 156 1.30e-53 188
Msa0367810 AT1G69490.1 55.769 156 64 4 5 157 8 161 2.45e-53 184
Msa0367810 AT5G18270.2 55.758 165 66 4 4 163 19 181 3.40e-53 186
Msa0367810 AT5G07680.2 55.769 156 66 2 4 158 1 154 5.72e-53 185
Msa0367810 AT5G07680.1 55.769 156 66 2 4 158 15 168 6.42e-53 185
Msa0367810 AT1G79580.3 53.846 156 66 3 4 157 15 166 6.59e-53 187
Msa0367810 AT1G79580.5 53.846 156 66 3 4 157 15 166 6.59e-53 187
Msa0367810 AT1G79580.4 53.846 156 66 3 4 157 15 166 6.59e-53 187
Msa0367810 AT1G79580.2 53.846 156 66 3 4 157 15 166 6.59e-53 187
Msa0367810 AT1G79580.1 53.846 156 66 3 4 157 15 166 6.59e-53 187
Msa0367810 AT1G32770.1 49.390 164 69 3 6 157 16 177 7.63e-53 186
Msa0367810 AT5G61430.1 55.128 156 67 2 4 158 14 167 1.22e-52 185
Msa0367810 AT5G18270.1 55.152 165 67 4 4 163 19 181 1.49e-52 184
Msa0367810 AT3G29035.1 56.688 157 65 2 4 159 22 176 1.66e-52 184
Msa0367810 AT5G53950.1 56.875 160 64 4 6 162 17 174 2.34e-52 185
Msa0367810 AT3G12977.1 51.572 159 75 1 1 159 13 169 3.93e-52 182
Msa0367810 AT1G01720.1 56.688 157 62 4 4 157 5 158 4.76e-52 182
Msa0367810 AT2G02450.1 50.276 181 78 6 8 185 53 224 5.72e-52 184
Msa0367810 AT2G02450.2 49.444 180 81 5 8 185 53 224 6.08e-52 185
Msa0367810 AT3G15170.1 54.375 160 68 4 6 162 20 177 6.60e-52 182
Msa0367810 AT3G61910.1 47.399 173 70 4 6 161 11 179 7.97e-52 182
Msa0367810 AT5G09330.5 53.254 169 77 2 1 169 1 167 9.14e-52 187
Msa0367810 AT5G09330.2 53.254 169 77 2 1 169 1 167 9.14e-52 187
Msa0367810 AT5G09330.4 53.254 169 77 2 1 169 1 167 9.14e-52 187
Msa0367810 AT5G09330.3 53.254 169 77 2 1 169 1 167 9.14e-52 187
Msa0367810 AT5G09330.1 53.254 169 77 2 1 169 1 167 9.14e-52 187
Msa0367810 AT3G04070.1 47.644 191 69 5 5 166 9 197 2.58e-51 182
Msa0367810 AT1G77450.1 54.321 162 69 3 2 161 6 164 3.93e-51 178
Msa0367810 AT5G08790.1 49.468 188 83 5 4 187 5 184 5.42e-51 179
Msa0367810 AT2G33480.1 53.896 154 65 2 4 157 13 160 7.92e-51 178
Msa0367810 AT2G46770.1 49.102 167 68 3 6 157 16 180 8.21e-51 181
Msa0367810 AT2G33480.2 53.247 154 64 2 4 157 13 158 4.06e-50 176
Msa0367810 AT1G56010.2 54.268 164 66 5 1 159 14 173 5.41e-50 177
Msa0367810 AT1G76420.1 53.846 156 66 3 5 158 21 172 1.68e-49 176
Msa0367810 AT3G04060.1 55.769 156 65 3 4 157 18 171 1.86e-49 176
Msa0367810 AT5G13180.1 55.769 156 60 3 4 157 12 160 2.28e-49 173
Msa0367810 AT1G26870.1 32.300 387 220 9 6 378 16 374 2.82e-49 178
Msa0367810 AT5G63790.1 47.396 192 87 5 2 182 46 234 4.14e-49 174
Msa0367810 AT1G61110.1 49.419 172 73 3 6 165 16 185 4.61e-49 175
Msa0367810 AT5G63790.2 47.396 192 87 5 2 182 56 244 4.63e-49 175
Msa0367810 AT5G39820.1 47.458 177 69 4 8 162 22 196 6.91e-49 175
Msa0367810 AT1G32870.2 57.576 165 66 3 6 169 10 171 9.27e-49 179
Msa0367810 AT3G15510.1 49.724 181 64 4 10 178 21 186 1.11e-48 175
Msa0367810 AT1G32870.1 57.576 165 66 3 6 169 10 171 1.30e-48 179
Msa0367810 AT1G32870.3 57.576 165 66 3 6 169 46 207 2.28e-48 179
Msa0367810 AT5G22290.1 36.082 291 140 10 1 279 16 272 2.56e-48 173
Msa0367810 AT3G44290.2 51.235 162 63 4 8 163 16 167 2.69e-48 169
Msa0367810 AT3G44290.1 51.235 162 63 4 8 163 16 167 9.16e-48 171
Msa0367810 AT2G17040.1 51.220 164 67 5 8 168 8 161 2.69e-47 168
Msa0367810 AT2G27300.1 50.633 158 69 2 1 158 9 157 2.72e-47 170
Msa0367810 AT2G43000.1 52.632 152 70 1 8 159 20 169 3.01e-47 168
Msa0367810 AT4G28530.1 52.047 171 55 7 6 157 10 172 8.79e-46 167
Msa0367810 AT1G52880.1 51.807 166 67 5 10 164 21 184 1.75e-43 159
Msa0367810 AT5G04395.1 48.630 146 61 2 2 133 24 169 7.65e-39 142
Msa0367810 AT3G12910.1 44.910 167 73 5 8 158 23 186 1.57e-36 139
Msa0367810 AT4G10350.2 48.485 132 63 4 63 192 20 148 1.10e-35 137
Msa0367810 AT5G61430.2 58.763 97 39 1 63 158 8 104 4.18e-33 129
Msa0367810 AT3G12977.2 54.639 97 44 0 63 159 20 116 3.42e-32 125
Msa0367810 AT4G01520.1 46.212 132 66 3 7 133 5 136 9.14e-31 123
Msa0367810 AT3G44350.2 39.610 154 89 3 9 158 8 161 2.32e-30 120
Msa0367810 AT5G22380.1 40.523 153 85 4 9 155 8 160 2.72e-30 119
Msa0367810 AT1G56010.1 53.704 108 44 3 55 159 2 106 3.59e-30 120
Msa0367810 AT4G01540.3 45.385 130 66 3 9 133 7 136 6.31e-29 120
Msa0367810 AT4G01540.4 45.385 130 66 3 9 133 7 136 7.27e-29 119
Msa0367810 AT4G01550.1 38.798 183 97 5 9 186 7 179 8.83e-29 120
Msa0367810 AT4G01540.2 45.385 130 66 3 9 133 7 136 9.17e-29 120
Msa0367810 AT2G33480.3 54.737 95 42 1 63 157 10 103 1.04e-28 114
Msa0367810 AT4G01540.1 45.385 130 66 3 9 133 7 136 1.17e-28 120
Msa0367810 AT5G64530.2 41.791 134 62 4 4 135 1 120 3.55e-28 111
Msa0367810 AT4G28530.2 51.695 118 36 4 6 105 10 124 4.24e-28 115
Msa0367810 AT3G04420.2 37.821 156 89 3 7 160 4 153 1.92e-27 113
Msa0367810 AT3G44350.1 41.985 131 72 3 9 135 8 138 4.13e-27 108
Msa0367810 AT5G64530.1 42.424 132 60 4 4 133 1 118 4.88e-27 108
Msa0367810 AT3G04420.1 37.821 156 89 3 7 160 4 153 1.01e-26 112
Msa0367810 AT1G02230.1 43.846 130 65 4 7 131 4 130 5.24e-26 110
Msa0367810 AT3G10490.4 56.667 90 38 1 81 170 2 90 1.62e-25 108
Msa0367810 AT3G10490.3 56.667 90 38 1 81 170 2 90 1.62e-25 108
Msa0367810 AT1G02250.1 37.662 154 81 6 7 154 4 148 3.11e-23 102
Msa0367810 AT1G02220.1 39.370 127 72 2 7 131 4 127 2.76e-22 100
Msa0367810 AT1G01010.1 36.943 157 79 5 9 154 6 153 2.24e-21 97.8
Msa0367810 AT2G43000.2 48.889 90 46 0 70 159 2 91 4.47e-21 92.0
Msa0367810 AT3G56530.1 33.117 154 97 3 4 155 50 199 2.89e-19 89.7
Msa0367810 AT3G55210.1 34.356 163 88 4 6 155 11 167 3.15e-19 89.0
Msa0367810 AT2G18060.2 44.048 84 44 1 86 169 2 82 4.40e-19 88.6
Msa0367810 AT5G50820.1 36.364 132 70 4 6 133 17 138 9.68e-19 85.1
Msa0367810 AT5G14000.2 34.091 132 81 2 4 133 13 140 4.17e-18 82.4
Msa0367810 AT5G14000.1 34.091 132 81 2 4 133 13 140 3.79e-17 80.9
Msa0367810 AT5G22290.2 29.665 209 101 10 87 283 2 176 2.89e-15 76.3
Msa0367810 AT3G04430.1 33.083 133 75 5 12 132 6 136 3.00e-13 69.7
Msa0367810 AT5G56620.2 31.548 168 75 8 4 137 41 202 6.62e-11 65.5
Msa0367810 AT5G56620.3 31.548 168 75 8 4 137 41 202 7.20e-11 65.1
Msa0367810 AT5G56620.1 31.548 168 75 8 4 137 41 202 8.04e-11 65.1

Find 164 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACAGTTTAAATTCTCAAAT+TGG 0.122100 3_1:+63726262 Msa0367810:three_prime_UTR
TCTTCATCATTTCCCAATTA+TGG 0.131333 3_1:+63724273 Msa0367810:CDS
AACACAAGATCAATTGAAAT+TGG 0.178255 3_1:+63724786 Msa0367810:CDS
TTTCATTGCCTCCTGGATTT+AGG 0.185491 3_1:+63722564 Msa0367810:CDS
CTCTCTCTTAAGGAAGTTTA+AGG 0.189890 3_1:+63725856 Msa0367810:CDS
TCTCTCCCAGTTTCTCTCTT+AGG 0.203286 3_1:+63722251 Msa0367810:five_prime_UTR
CAATCCTTCTGCTGGCTTGC+AGG 0.208231 3_1:+63723778 Msa0367810:CDS
ATTAGGTGTGGATCCATAAT+TGG 0.210005 3_1:-63724286 None:intergenic
GGAATGAGCAAGAGAAAATT+TGG 0.218277 3_1:+63726062 Msa0367810:CDS
AGAGAGTATGCTTGATTCTT+TGG 0.226102 3_1:-63725839 None:intergenic
TTGACTTCTTTGTTGATATT+TGG 0.231733 3_1:-63725542 None:intergenic
TACCTCAAAAGAAAGATTAA+TGG 0.252239 3_1:+63722620 Msa0367810:CDS
TATTAGTCCCATTCATGTTT+TGG 0.257396 3_1:-63724164 None:intergenic
TTTCATGTACTTCATCAAAT+TGG 0.260038 3_1:-63725879 None:intergenic
ACATATTGCTCCCCAACTTT+TGG 0.262023 3_1:-63724012 None:intergenic
GAAGATCCTAAGAGAGAAAC+TGG 0.262472 3_1:-63722257 None:intergenic
TCATCTATAAAATTCTCATT+AGG 0.282892 3_1:-63725614 None:intergenic
ACAGTTTAAATTCTCAAATT+GGG 0.285625 3_1:+63726263 Msa0367810:three_prime_UTR
AAGATGACACAATTAGTTTC+AGG 0.285637 3_1:+63724528 Msa0367810:CDS
ATTTCAATTGATCTTGTGTT+TGG 0.306451 3_1:-63724783 None:intergenic
GAGCAACAAAATCTGGATAT+TGG 0.309075 3_1:+63723606 Msa0367810:CDS
AATTGCACTTGCTATTATCT+TGG 0.309644 3_1:-63725909 None:intergenic
AACATTGATAATTTCTCAAT+AGG 0.311209 3_1:+63725572 Msa0367810:CDS
CTATTGGTTCTTGACCCATT+TGG 0.316548 3_1:-63723584 None:intergenic
TTGGGAAATGATGAAGATAT+TGG 0.325209 3_1:-63724267 None:intergenic
ACATTGATAATTTCTCAATA+GGG 0.325841 3_1:+63725573 Msa0367810:CDS
CTGTACTCTTCTTGAATATA+CGG 0.326332 3_1:-63723981 None:intergenic
ACCAATAGAGCAACAAAATC+TGG 0.328796 3_1:+63723599 Msa0367810:CDS
CAAGAGAAAATTTGGTTTGT+TGG 0.331645 3_1:+63726070 Msa0367810:CDS
AGTTCAACTCAATCCAATTC+TGG 0.331873 3_1:+63725775 Msa0367810:CDS
ATTGCTACCGGGAAAAGATT+TGG 0.335984 3_1:+63723526 Msa0367810:CDS
TTGTTTGTGAAGGTGTTATT+TGG 0.349202 3_1:-63725748 None:intergenic
ACCTTGGATGGAGGGTAATT+AGG 0.353293 3_1:-63724303 None:intergenic
ACACAAGATCAATTGAAATT+GGG 0.359406 3_1:+63724787 Msa0367810:CDS
TCACAAGGGATGATGGGATT+TGG 0.365857 3_1:+63724211 Msa0367810:CDS
AAGCTTGAAATATCCTCAAT+TGG 0.369497 3_1:-63725325 None:intergenic
ATCAAGCATACTCTCTCTTA+AGG 0.390216 3_1:+63725846 Msa0367810:CDS
AGATTATAATATATTTCATA+TGG 0.391416 3_1:+63722535 Msa0367810:exon
CATCTATAAAATTCTCATTA+GGG 0.392715 3_1:-63725613 None:intergenic
GCACCTGTTTCATTGCCTCC+TGG 0.396749 3_1:+63722557 Msa0367810:CDS
CTCTTCCTCTATAGTAAACT+AGG 0.397058 3_1:-63723691 None:intergenic
CAGTGATTGCTCCAAAAGTT+GGG 0.399593 3_1:+63724001 Msa0367810:CDS
TTGTGGCAGGATTTGATTTG+AGG 0.407390 3_1:+63722378 Msa0367810:intron
TCTTTCTCTTCAACTAATCA+AGG 0.408185 3_1:+63722278 Msa0367810:five_prime_UTR
ATAGCATGAAGAAAATCATT+TGG 0.409581 3_1:+63726041 Msa0367810:CDS
AAATGAAACAGATATCTTGC+AGG 0.410733 3_1:+63724569 Msa0367810:CDS
CACTTGTAGAGATCAACTTC+AGG 0.419704 3_1:-63722668 None:intergenic
TTCAATAACAAACTATCATA+TGG 0.425203 3_1:-63726183 None:intergenic
TTCTTTGCCTCCCTTGGAGG+TGG 0.430580 3_1:+63724470 Msa0367810:CDS
GGGAATGTCACAAGGGATGA+TGG 0.436835 3_1:+63724204 Msa0367810:CDS
TTTCAAGCTTCAAAACAAAC+AGG 0.437336 3_1:+63725338 Msa0367810:CDS
GTTGGTATCAAAAGTGGTAA+AGG 0.438741 3_1:+63726088 Msa0367810:CDS
TGCCATATGATTTGCATGCC+TGG 0.441673 3_1:-63724046 None:intergenic
GGTGCTTTGTGTTTATTTGA+AGG 0.441954 3_1:+63725955 Msa0367810:CDS
TTTGGATACTTCCTATCTCT+AGG 0.442345 3_1:-63723566 None:intergenic
AATCCAGGAGGCAATGAAAC+AGG 0.443707 3_1:-63722560 None:intergenic
TCAAAAGGTTGTTCCAATTG+AGG 0.446357 3_1:+63725312 Msa0367810:CDS
GGATCTTGATAATGAATTCA+AGG 0.446485 3_1:+63724809 Msa0367810:CDS
GAAGGAAGAGATGAAGCTAT+AGG 0.448143 3_1:+63724102 Msa0367810:CDS
ACAGTGATTGCTCCAAAAGT+TGG 0.449271 3_1:+63724000 Msa0367810:CDS
GCACTTGCTATTATCTTGGA+TGG 0.452753 3_1:-63725905 None:intergenic
AAAGAGCCAAAGATATGGTT+AGG 0.454099 3_1:-63726144 None:intergenic
TCAAACTACTCACATGCATT+TGG 0.457307 3_1:+63724636 Msa0367810:CDS
CAATTTATATTCAAATAAAG+AGG 0.466646 3_1:+63722486 Msa0367810:five_prime_UTR
GAGGTGGTCTTGAAGAAGAT+AGG 0.470778 3_1:+63726115 Msa0367810:CDS
AAAACCCTAGTTTACTATAG+AGG 0.471807 3_1:+63723686 Msa0367810:CDS
GGTACAAAGAGCCAAAGATA+TGG 0.473498 3_1:-63726149 None:intergenic
TGGTTTGTTGGTATCAAAAG+TGG 0.479971 3_1:+63726082 Msa0367810:CDS
GTAGAGAATTTAAGATGGGT+TGG 0.480908 3_1:+63724843 Msa0367810:CDS
TTAGGTGTGGATCCATAATT+GGG 0.482044 3_1:-63724285 None:intergenic
TGGGATGTGCTTGGATCCCA+TGG 0.482178 3_1:-63724144 None:intergenic
AGAGATAGGAAGTATCCAAA+TGG 0.482478 3_1:+63723569 Msa0367810:CDS
TCTGGATATTGGAAGGCAAC+CGG 0.484020 3_1:+63723617 Msa0367810:CDS
AGCACATCCCAAAACATGAA+TGG 0.484763 3_1:+63724156 Msa0367810:CDS
GCACATCCCAAAACATGAAT+GGG 0.487558 3_1:+63724157 Msa0367810:CDS
CAAAGTCAGAATATGTGAAA+AGG 0.488239 3_1:+63725999 Msa0367810:CDS
GACCAGGCATGCAAATCATA+TGG 0.490294 3_1:+63724044 Msa0367810:CDS
CTTTGGCTCTTTGTACCATG+TGG 0.492296 3_1:+63726155 Msa0367810:CDS
TTGGATACTTCCTATCTCTA+GGG 0.493241 3_1:-63723565 None:intergenic
ACATGGATCTCGTACCGGTT+GGG 0.496093 3_1:+63723718 Msa0367810:CDS
ATGCATGTGAGTAGTTTGAT+TGG 0.498766 3_1:-63724632 None:intergenic
GCTCAAGTTATTTGATGCCA+TGG 0.500480 3_1:+63724127 Msa0367810:CDS
CGCATTCTCTTTCATCAAGA+CGG 0.502157 3_1:-63723754 None:intergenic
GATGGTAGAGAATTTAAGAT+GGG 0.510921 3_1:+63724839 Msa0367810:CDS
GTACTCATGCATAACCCAAC+CGG 0.514797 3_1:-63723732 None:intergenic
CACATGGATCTCGTACCGGT+TGG 0.516593 3_1:+63723717 Msa0367810:CDS
GGAATGTCACAAGGGATGAT+GGG 0.516641 3_1:+63724205 Msa0367810:CDS
GAAAGAACGTGTCTGCTACT+TGG 0.516699 3_1:-63725724 None:intergenic
GGATTTGATTTGAGGCCTTG+TGG 0.517158 3_1:+63722386 Msa0367810:intron
TTCATTTCTAGTTCCACTCA+TGG 0.517202 3_1:-63724553 None:intergenic
CAGAATTCATACCAACTTGA+GGG 0.517910 3_1:-63724500 None:intergenic
AATTTATATTCAAATAAAGA+GGG 0.523905 3_1:+63722487 Msa0367810:five_prime_UTR
GAATGCGACAATCCTTCTGC+TGG 0.526878 3_1:+63723770 Msa0367810:CDS
TATAGGGAAGTCATTGCTAC+CGG 0.528788 3_1:+63723514 Msa0367810:intron
TTTGGCTCTTTGTACCATGT+GGG 0.528855 3_1:+63726156 Msa0367810:CDS
CAGTTTAAATTCTCAAATTG+GGG 0.530363 3_1:+63726264 Msa0367810:three_prime_UTR
CACAAGATCAATTGAAATTG+GGG 0.530743 3_1:+63724788 Msa0367810:CDS
AACAAAATCTGGATATTGGA+AGG 0.532279 3_1:+63723610 Msa0367810:CDS
TAATGGCCGTAGGATTGAGT+TGG 0.534104 3_1:+63722637 Msa0367810:CDS
AGGGAAATCTTCCACCTCCA+AGG 0.534705 3_1:-63724481 None:intergenic
GAAACTAGTAGTACCTTGGA+TGG 0.537317 3_1:-63724315 None:intergenic
GATATATTGATGACAAAGCA+TGG 0.540219 3_1:+63724754 Msa0367810:CDS
CTCAAGTTATTTGATGCCAT+GGG 0.540843 3_1:+63724128 Msa0367810:CDS
GGATGGTAGAGAATTTAAGA+TGG 0.547842 3_1:+63724838 Msa0367810:CDS
GAGATAGGAAGTATCCAAAT+GGG 0.549896 3_1:+63723570 Msa0367810:CDS
TGGATTTAGGTTCCACCCCA+CGG 0.550597 3_1:+63722577 Msa0367810:CDS
TGTGAACCATGGGACTTGCC+AGG 0.552299 3_1:+63722689 Msa0367810:CDS
ACTTGTAGAGATCAACTTCA+GGG 0.553531 3_1:-63722667 None:intergenic
TACAAGCTATGAAGTTGTTG+AGG 0.553873 3_1:+63725661 Msa0367810:CDS
AACTACTCACATGCATTTGG+TGG 0.556142 3_1:+63724639 Msa0367810:CDS
TTAGTTTCAGGTTCCATGAG+TGG 0.557712 3_1:+63724540 Msa0367810:CDS
ATAATGAATTCAAGGCTGAA+AGG 0.558323 3_1:+63724817 Msa0367810:CDS
TGAATTCAAGGCTGAAAGGA+TGG 0.559338 3_1:+63724821 Msa0367810:CDS
GTGAAAAGGAAATATAGCTA+TGG 0.559403 3_1:+63726013 Msa0367810:CDS
TGAACTTTGATTGTTTGTGA+AGG 0.561663 3_1:-63725758 None:intergenic
ATACTCTCAATAACAATGGT+GGG 0.561919 3_1:+63724184 Msa0367810:CDS
GAAACAACAAAAGTTAGTCA+TGG 0.565828 3_1:+63725683 Msa0367810:CDS
GTGGAAGATTTCCCTCAAGT+TGG 0.565953 3_1:+63724489 Msa0367810:CDS
TATCATATGGTTAGCCCACA+TGG 0.566918 3_1:-63726170 None:intergenic
AACAAACAGGAAAGAGAATG+AGG 0.567981 3_1:+63725351 Msa0367810:CDS
AATACTCTCAATAACAATGG+TGG 0.568121 3_1:+63724183 Msa0367810:CDS
AATGCTCAGACTCGTGCCGT+TGG 0.569874 3_1:+63723656 Msa0367810:CDS
AGCATTGAGTTGTACTCTGA+AGG 0.569905 3_1:+63724084 Msa0367810:CDS
ACCTAATTACCCTCCATCCA+AGG 0.571030 3_1:+63724302 Msa0367810:CDS
TGTTTATTTGAAGGAGCAAG+TGG 0.572910 3_1:+63725964 Msa0367810:CDS
TACCGGGAAAAGATTTGGAA+TGG 0.574832 3_1:+63723531 Msa0367810:CDS
AGTGTGCAAGGATGCAACAT+AGG 0.574842 3_1:+63724445 Msa0367810:CDS
GTGGGGTGGAACCTAAATCC+AGG 0.578809 3_1:-63722575 None:intergenic
CTAGTAGTACCTTGGATGGA+GGG 0.579501 3_1:-63724311 None:intergenic
GAAACAAGTTCTTCATCCGT+GGG 0.579985 3_1:-63722593 None:intergenic
TAGAGCTGCCTCGTTACACC+CGG 0.580212 3_1:-63722425 None:intergenic
GGGAAATCTTCCACCTCCAA+GGG 0.583139 3_1:-63724480 None:intergenic
AGAAACAAGTTCTTCATCCG+TGG 0.583246 3_1:-63722594 None:intergenic
ATTATACCTGGCAAGTCCCA+TGG 0.597224 3_1:-63722695 None:intergenic
GTCAAGCAATGATTTAGAGA+AGG 0.598075 3_1:+63724869 Msa0367810:CDS
TGATCTCCAACTCAATCCTA+CGG 0.598596 3_1:-63722643 None:intergenic
TCTCTACAAGTGTGAACCAT+GGG 0.599917 3_1:+63722679 Msa0367810:CDS
TCAGAATTCATACCAACTTG+AGG 0.601198 3_1:-63724501 None:intergenic
CAAACCTGCAAGCCAGCAGA+AGG 0.602880 3_1:-63723782 None:intergenic
CAAGTTCTTCATCCGTGGGG+TGG 0.607689 3_1:-63722589 None:intergenic
TCTTCCTCTATAGTAAACTA+GGG 0.609079 3_1:-63723690 None:intergenic
ACTAGTAGTACCTTGGATGG+AGG 0.611789 3_1:-63724312 None:intergenic
ATATAGCACTAGAGTGTGCA+AGG 0.612154 3_1:+63724433 Msa0367810:CDS
GGATGGAGGGTAATTAGGTG+TGG 0.613754 3_1:-63724298 None:intergenic
GCACCACATGGATCTCGTAC+CGG 0.616866 3_1:+63723713 Msa0367810:CDS
TTTATATTCAAATAAAGAGG+GGG 0.617945 3_1:+63722489 Msa0367810:five_prime_UTR
ACAATGGTGGGAATGTCACA+AGG 0.618508 3_1:+63724196 Msa0367810:CDS
GGCAACCGGAAAAGATCGCA+AGG 0.625272 3_1:+63723631 Msa0367810:CDS
ATATATTGATGACAAAGCAT+GGG 0.629524 3_1:+63724755 Msa0367810:CDS
ACTAATACTCTCAATAACAA+TGG 0.632242 3_1:+63724180 Msa0367810:CDS
AGTGATTGCTCCAAAAGTTG+GGG 0.636145 3_1:+63724002 Msa0367810:CDS
ATAGGGAAGTCATTGCTACC+GGG 0.636793 3_1:+63723515 Msa0367810:intron
AGGAAAGAGAATGAGGTGCA+AGG 0.639598 3_1:+63725358 Msa0367810:CDS
ATTTATATTCAAATAAAGAG+GGG 0.641032 3_1:+63722488 Msa0367810:five_prime_UTR
ATCTCTACAAGTGTGAACCA+TGG 0.647017 3_1:+63722678 Msa0367810:CDS
AAGATCCTAAGAGAGAAACT+GGG 0.647334 3_1:-63722256 None:intergenic
AAATCTTCCACCTCCAAGGG+AGG 0.647573 3_1:-63724477 None:intergenic
AAAGAAAGATTAATGGCCGT+AGG 0.654666 3_1:+63722627 Msa0367810:CDS
TATAGAGGAAGAGCACCACA+TGG 0.688357 3_1:+63723701 Msa0367810:CDS
AATATGTTAATAATGTGACC+AGG 0.693806 3_1:+63724028 Msa0367810:CDS
CAATGGTGGGAATGTCACAA+GGG 0.721046 3_1:+63724197 Msa0367810:CDS
AAACAAGTTCTTCATCCGTG+GGG 0.735674 3_1:-63722592 None:intergenic
GGGTGGAACCTAAATCCAGG+AGG 0.752098 3_1:-63722572 None:intergenic
CAACCGGTACGAGATCCATG+TGG 0.766013 3_1:-63723716 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTTATTAAATATTATA+GGG - chr3_1:63725238-63725257 None:intergenic 0.0%
!! AATTTATATTCAAATAAAGA+GGG + chr3_1:63722487-63722506 Msa0367810:five_prime_UTR 10.0%
!! AGATTATAATATATTTCATA+TGG + chr3_1:63722535-63722554 Msa0367810:exon 10.0%
!!! TTAATTAAATGCATTTTTTT+TGG + chr3_1:63724352-63724371 Msa0367810:intron 10.0%
!! ACTAAAAACAAAATAAAATT+AGG - chr3_1:63726214-63726233 None:intergenic 10.0%
!! TAAAAAAAAATACAAGTATT+TGG - chr3_1:63726322-63726341 None:intergenic 10.0%
!! AGAAAATTAATTAAACTTGA+TGG - chr3_1:63722325-63722344 None:intergenic 15.0%
!!! ATTAATTTTCTATGTACATA+AGG + chr3_1:63722334-63722353 Msa0367810:intron 15.0%
!! CAATTTATATTCAAATAAAG+AGG + chr3_1:63722486-63722505 Msa0367810:five_prime_UTR 15.0%
!! ATTTATATTCAAATAAAGAG+GGG + chr3_1:63722488-63722507 Msa0367810:five_prime_UTR 15.0%
!!! TCTTGTTATAAAATTATCTT+TGG - chr3_1:63722987-63723006 None:intergenic 15.0%
!!! TTTGAAATCTTCTTTAATAT+GGG - chr3_1:63723388-63723407 None:intergenic 15.0%
!!! TTTTGAAATCTTCTTTAATA+TGG - chr3_1:63723389-63723408 None:intergenic 15.0%
!!! AAATTGTCTTAATTATTTTC+AGG + chr3_1:63724407-63724426 Msa0367810:intron 15.0%
!!! CATTTTTAAAATCCATTTTT+GGG - chr3_1:63725020-63725039 None:intergenic 15.0%
!!! ACATTTTTAAAATCCATTTT+TGG - chr3_1:63725021-63725040 None:intergenic 15.0%
!! GTATACTTAATAAAATTCTA+GGG - chr3_1:63725057-63725076 None:intergenic 15.0%
!! AGTATACTTAATAAAATTCT+AGG - chr3_1:63725058-63725077 None:intergenic 15.0%
!!! AATAATTTTACAGAGTTTTA+TGG + chr3_1:63725282-63725301 Msa0367810:intron 15.0%
!! AAACTAAATTTACTAACAAT+AGG + chr3_1:63725490-63725509 Msa0367810:intron 15.0%
!!! TACTTGTATTTTTTTTTACT+TGG + chr3_1:63726324-63726343 Msa0367810:three_prime_UTR 15.0%
!! TTTATATTCAAATAAAGAGG+GGG + chr3_1:63722489-63722508 Msa0367810:five_prime_UTR 20.0%
!! ATGTCATATAATATTATACC+TGG - chr3_1:63722710-63722729 None:intergenic 20.0%
!!! GATAATTTTATAACAAGAAG+AGG + chr3_1:63722989-63723008 Msa0367810:intron 20.0%
!! AAAGAATCTTAAAAAAGTGA+AGG + chr3_1:63723120-63723139 Msa0367810:intron 20.0%
!!! AGTATATTTTTTTTCCACTT+TGG + chr3_1:63723221-63723240 Msa0367810:intron 20.0%
!! ACTTTGGCATAAAATATTTA+GGG + chr3_1:63723237-63723256 Msa0367810:intron 20.0%
!! AAACATGCAAATATATAACT+AGG + chr3_1:63723428-63723447 Msa0367810:intron 20.0%
!! TATACTAGTTAGTAATAAAG+AGG - chr3_1:63723817-63723836 None:intergenic 20.0%
!! CTTTATTACTAACTAGTATA+TGG + chr3_1:63723817-63723836 Msa0367810:intron 20.0%
!! TAGTATATGGTTGTTTAATA+TGG + chr3_1:63723830-63723849 Msa0367810:intron 20.0%
!!! AACATTTTATTGTCTATAGA+TGG - chr3_1:63723919-63723938 None:intergenic 20.0%
!! TTGAAAAAAATTGTGATTTC+AGG + chr3_1:63723942-63723961 Msa0367810:intron 20.0%
!!! TGAAAATGACTTTACTTTTA+TGG + chr3_1:63724686-63724705 Msa0367810:CDS 20.0%
!! ATATTATAAAGTCCCAAAAA+TGG + chr3_1:63725005-63725024 Msa0367810:intron 20.0%
!!! TTAATAAAATTCTAGGGTAT+GGG - chr3_1:63725051-63725070 None:intergenic 20.0%
!! TAATGTTATCTTATTAGTGT+TGG + chr3_1:63725153-63725172 Msa0367810:intron 20.0%
!! TATTAAATATTATAGGGTCT+AGG - chr3_1:63725232-63725251 None:intergenic 20.0%
!!! TTTATTTTTGTAATTGACCT+TGG + chr3_1:63725412-63725431 Msa0367810:intron 20.0%
!!! AACATTGATAATTTCTCAAT+AGG + chr3_1:63725572-63725591 Msa0367810:CDS 20.0%
!!! ACATTGATAATTTCTCAATA+GGG + chr3_1:63725573-63725592 Msa0367810:CDS 20.0%
!! CATCTATAAAATTCTCATTA+GGG - chr3_1:63725616-63725635 None:intergenic 20.0%
!! TCATCTATAAAATTCTCATT+AGG - chr3_1:63725617-63725636 None:intergenic 20.0%
!!! AATGAGAATTTTATAGATGA+TGG + chr3_1:63725617-63725636 Msa0367810:CDS 20.0%
!!! GATTTTTTATTTTCCAGAAT+TGG - chr3_1:63725791-63725810 None:intergenic 20.0%
!! TTCAATAACAAACTATCATA+TGG - chr3_1:63726186-63726205 None:intergenic 20.0%
!!! TGTTTTTAGTTTCTAACTTA+AGG + chr3_1:63726224-63726243 Msa0367810:three_prime_UTR 20.0%
!! AACAGTTTAAATTCTCAAAT+TGG + chr3_1:63726262-63726281 Msa0367810:three_prime_UTR 20.0%
!! ACAGTTTAAATTCTCAAATT+GGG + chr3_1:63726263-63726282 Msa0367810:three_prime_UTR 20.0%
!!! TTGGGGTTTTAAAATTATAT+AGG + chr3_1:63726281-63726300 Msa0367810:three_prime_UTR 20.0%
!!! TGGGGTTTTAAAATTATATA+GGG + chr3_1:63726282-63726301 Msa0367810:three_prime_UTR 20.0%
!! GTACATAAGGTTCTTAATTT+TGG + chr3_1:63722347-63722366 Msa0367810:intron 25.0%
!!! TAATTTTGGCTTGTTTTTTG+TGG + chr3_1:63722361-63722380 Msa0367810:intron 25.0%
! TACCTCAAAAGAAAGATTAA+TGG + chr3_1:63722620-63722639 Msa0367810:CDS 25.0%
! ATACATGCAAACAAAAATAG+AGG + chr3_1:63722922-63722941 Msa0367810:intron 25.0%
! CTGATTGACAAAATCATTAT+TGG + chr3_1:63723046-63723065 Msa0367810:intron 25.0%
!! CTAAATATTTTATGCCAAAG+TGG - chr3_1:63723238-63723257 None:intergenic 25.0%
! CACTTTGGCATAAAATATTT+AGG + chr3_1:63723236-63723255 Msa0367810:intron 25.0%
! CTTTGGCATAAAATATTTAG+GGG + chr3_1:63723238-63723257 Msa0367810:intron 25.0%
!!! TTTGCATGTTTTGATTTGAA+AGG - chr3_1:63723419-63723438 None:intergenic 25.0%
! CACGCATAATAATAACAAAA+TGG - chr3_1:63723487-63723506 None:intergenic 25.0%
! AAAATAATAGAGTCTATCGT+TGG - chr3_1:63723862-63723881 None:intergenic 25.0%
! AATATGTTAATAATGTGACC+AGG + chr3_1:63724028-63724047 Msa0367810:CDS 25.0%
! ACTAATACTCTCAATAACAA+TGG + chr3_1:63724180-63724199 Msa0367810:CDS 25.0%
!!! TTGTCTTAATTATTTTCAGG+TGG + chr3_1:63724410-63724429 Msa0367810:intron 25.0%
!!! AATGACTTTACTTTTATGGT+TGG + chr3_1:63724690-63724709 Msa0367810:CDS 25.0%
!! ATATATTGATGACAAAGCAT+GGG + chr3_1:63724755-63724774 Msa0367810:CDS 25.0%
! ATTTCAATTGATCTTGTGTT+TGG - chr3_1:63724786-63724805 None:intergenic 25.0%
! AACACAAGATCAATTGAAAT+TGG + chr3_1:63724786-63724805 Msa0367810:CDS 25.0%
! ACACAAGATCAATTGAAATT+GGG + chr3_1:63724787-63724806 Msa0367810:CDS 25.0%
!!! CTTAATAAAATTCTAGGGTA+TGG - chr3_1:63725052-63725071 None:intergenic 25.0%
! TATTCTTATGAGTACTATCA+AGG + chr3_1:63725182-63725201 Msa0367810:intron 25.0%
! TTGACTTCTTTGTTGATATT+TGG - chr3_1:63725545-63725564 None:intergenic 25.0%
! TTTCATGTACTTCATCAAAT+TGG - chr3_1:63725882-63725901 None:intergenic 25.0%
!!! GTTCATATTTGCACTTTTTT+TGG + chr3_1:63725934-63725953 Msa0367810:CDS 25.0%
! ATAGCATGAAGAAAATCATT+TGG + chr3_1:63726041-63726060 Msa0367810:CDS 25.0%
!! AATTTTCCTAACCATATCTT+TGG + chr3_1:63726138-63726157 Msa0367810:CDS 25.0%
! CAGTTTAAATTCTCAAATTG+GGG + chr3_1:63726264-63726283 Msa0367810:three_prime_UTR 25.0%
!!! GGGGTTTTAAAATTATATAG+GGG + chr3_1:63726283-63726302 Msa0367810:three_prime_UTR 25.0%
TCTTTCTCTTCAACTAATCA+AGG + chr3_1:63722278-63722297 Msa0367810:five_prime_UTR 30.0%
AAAAAAAAAACTGTGCCACA+AGG - chr3_1:63722404-63722423 None:intergenic 30.0%
!!! TGGCACAGTTTTTTTTTTTC+CGG + chr3_1:63722406-63722425 Msa0367810:five_prime_UTR 30.0%
TTGGTCAATGTTCAAAACTA+AGG - chr3_1:63722968-63722987 None:intergenic 30.0%
GTCAATCAGAACAAAATAAG+AGG - chr3_1:63723035-63723054 None:intergenic 30.0%
ACTTAACATATTAGGGAGAA+TGG + chr3_1:63723264-63723283 Msa0367810:intron 30.0%
CATAGTAATGAGGAAATAGT+TGG + chr3_1:63723325-63723344 Msa0367810:intron 30.0%
!!! TTGTTGACTGTTTTTGAGTT+GGG - chr3_1:63723354-63723373 None:intergenic 30.0%
!!! TTTGTTGACTGTTTTTGAGT+TGG - chr3_1:63723355-63723374 None:intergenic 30.0%
ACTCAAAAACAGTCAACAAA+AGG + chr3_1:63723355-63723374 Msa0367810:intron 30.0%
AAAACAGTCAACAAAAGGAA+AGG + chr3_1:63723360-63723379 Msa0367810:intron 30.0%
ATTATGCGTGACATCATTAT+AGG + chr3_1:63723497-63723516 Msa0367810:intron 30.0%
TTATGCGTGACATCATTATA+GGG + chr3_1:63723498-63723517 Msa0367810:intron 30.0%
AACAAAATCTGGATATTGGA+AGG + chr3_1:63723610-63723629 Msa0367810:CDS 30.0%
AAAACCCTAGTTTACTATAG+AGG + chr3_1:63723686-63723705 Msa0367810:CDS 30.0%
TCTTCCTCTATAGTAAACTA+GGG - chr3_1:63723693-63723712 None:intergenic 30.0%
TATGGTTGTTTAATATGGAC+CGG + chr3_1:63723835-63723854 Msa0367810:intron 30.0%
CTGTACTCTTCTTGAATATA+CGG - chr3_1:63723984-63724003 None:intergenic 30.0%
! ATTAGTCCCATTCATGTTTT+GGG - chr3_1:63724166-63724185 None:intergenic 30.0%
! TATTAGTCCCATTCATGTTT+TGG - chr3_1:63724167-63724186 None:intergenic 30.0%
AATACTCTCAATAACAATGG+TGG + chr3_1:63724183-63724202 Msa0367810:CDS 30.0%
ATACTCTCAATAACAATGGT+GGG + chr3_1:63724184-63724203 Msa0367810:CDS 30.0%
TTGGGAAATGATGAAGATAT+TGG - chr3_1:63724270-63724289 None:intergenic 30.0%
TCTTCATCATTTCCCAATTA+TGG + chr3_1:63724273-63724292 Msa0367810:CDS 30.0%
AAAAGAAACTAGTAGTACCT+TGG - chr3_1:63724322-63724341 None:intergenic 30.0%
! AAGATGACACAATTAGTTTC+AGG + chr3_1:63724528-63724547 Msa0367810:CDS 30.0%
AAATGAAACAGATATCTTGC+AGG + chr3_1:63724569-63724588 Msa0367810:CDS 30.0%
! GATATATTGATGACAAAGCA+TGG + chr3_1:63724754-63724773 Msa0367810:CDS 30.0%
CACAAGATCAATTGAAATTG+GGG + chr3_1:63724788-63724807 Msa0367810:CDS 30.0%
!! GGATCTTGATAATGAATTCA+AGG + chr3_1:63724809-63724828 Msa0367810:CDS 30.0%
ATAATGAATTCAAGGCTGAA+AGG + chr3_1:63724817-63724836 Msa0367810:CDS 30.0%
! GATGGTAGAGAATTTAAGAT+GGG + chr3_1:63724839-63724858 Msa0367810:CDS 30.0%
CATAGAAATCCACCATATAT+AGG + chr3_1:63724970-63724989 Msa0367810:intron 30.0%
AAAAGATAGCCTATATATGG+TGG - chr3_1:63724982-63725001 None:intergenic 30.0%
! ACCATATATAGGCTATCTTT+TGG + chr3_1:63724981-63725000 Msa0367810:intron 30.0%
ACCAAAAGATAGCCTATATA+TGG - chr3_1:63724985-63725004 None:intergenic 30.0%
ACATCAAATGATTGGATGTT+AGG - chr3_1:63725082-63725101 None:intergenic 30.0%
TACATGTGACATCAAATGAT+TGG - chr3_1:63725090-63725109 None:intergenic 30.0%
! TTTTATGGATGAGCATCAAA+AGG + chr3_1:63725297-63725316 Msa0367810:CDS 30.0%
AAGCTTGAAATATCCTCAAT+TGG - chr3_1:63725328-63725347 None:intergenic 30.0%
TTTCAAGCTTCAAAACAAAC+AGG + chr3_1:63725338-63725357 Msa0367810:CDS 30.0%
GAAACAACAAAAGTTAGTCA+TGG + chr3_1:63725683-63725702 Msa0367810:CDS 30.0%
!! TTGTTTGTGAAGGTGTTATT+TGG - chr3_1:63725751-63725770 None:intergenic 30.0%
TGAACTTTGATTGTTTGTGA+AGG - chr3_1:63725761-63725780 None:intergenic 30.0%
!! AATTGCACTTGCTATTATCT+TGG - chr3_1:63725912-63725931 None:intergenic 30.0%
! CTTTTCACATATTCTGACTT+TGG - chr3_1:63726001-63726020 None:intergenic 30.0%
CAAAGTCAGAATATGTGAAA+AGG + chr3_1:63725999-63726018 Msa0367810:CDS 30.0%
GTGAAAAGGAAATATAGCTA+TGG + chr3_1:63726013-63726032 Msa0367810:CDS 30.0%
!! CAAGAGAAAATTTGGTTTGT+TGG + chr3_1:63726070-63726089 Msa0367810:CDS 30.0%
AAGATCCTAAGAGAGAAACT+GGG - chr3_1:63722259-63722278 None:intergenic 35.0%
!!! GGCACAGTTTTTTTTTTTCC+GGG + chr3_1:63722407-63722426 Msa0367810:five_prime_UTR 35.0%
! AGGGGGTGCATATATAAATT+TGG + chr3_1:63722506-63722525 Msa0367810:five_prime_UTR 35.0%
! GGCCATTAATCTTTCTTTTG+AGG - chr3_1:63722625-63722644 None:intergenic 35.0%
AAAGAAAGATTAATGGCCGT+AGG + chr3_1:63722627-63722646 Msa0367810:CDS 35.0%
ACTTGTAGAGATCAACTTCA+GGG - chr3_1:63722670-63722689 None:intergenic 35.0%
!! AGGTTGATCTTTTCATCTCA+AGG - chr3_1:63723015-63723034 None:intergenic 35.0%
GAAACACATGCTTGCTTTAT+TGG + chr3_1:63723195-63723214 Msa0367810:intron 35.0%
GAGAATGGTCCTTCAAAATA+GGG + chr3_1:63723279-63723298 Msa0367810:intron 35.0%
!! CAACAGTAACCCTATTTTGA+AGG - chr3_1:63723291-63723310 None:intergenic 35.0%
GCAAATATATAACTAGGTCG+AGG + chr3_1:63723434-63723453 Msa0367810:intron 35.0%
! TACCATTCCAAATCTTTTCC+CGG - chr3_1:63723536-63723555 None:intergenic 35.0%
!!! ATTTTTTCAGCCCTAGAGAT+AGG + chr3_1:63723555-63723574 Msa0367810:CDS 35.0%
TTGGATACTTCCTATCTCTA+GGG - chr3_1:63723568-63723587 None:intergenic 35.0%
TTTGGATACTTCCTATCTCT+AGG - chr3_1:63723569-63723588 None:intergenic 35.0%
!! AGAGATAGGAAGTATCCAAA+TGG + chr3_1:63723569-63723588 Msa0367810:CDS 35.0%
!! GAGATAGGAAGTATCCAAAT+GGG + chr3_1:63723570-63723589 Msa0367810:CDS 35.0%
ACCAATAGAGCAACAAAATC+TGG + chr3_1:63723599-63723618 Msa0367810:CDS 35.0%
! TCCAGATTTTGTTGCTCTAT+TGG - chr3_1:63723603-63723622 None:intergenic 35.0%
GAGCAACAAAATCTGGATAT+TGG + chr3_1:63723606-63723625 Msa0367810:CDS 35.0%
! TAGGGTTTTCTTCATTCCAA+CGG - chr3_1:63723675-63723694 None:intergenic 35.0%
CTCTTCCTCTATAGTAAACT+AGG - chr3_1:63723694-63723713 None:intergenic 35.0%
GTTAGTAATAAAGAGGTTCG+CGG - chr3_1:63723810-63723829 None:intergenic 35.0%
CTCAAGTTATTTGATGCCAT+GGG + chr3_1:63724128-63724147 Msa0367810:CDS 35.0%
TTAGGTGTGGATCCATAATT+GGG - chr3_1:63724288-63724307 None:intergenic 35.0%
ATTAGGTGTGGATCCATAAT+TGG - chr3_1:63724289-63724308 None:intergenic 35.0%
CAGAATTCATACCAACTTGA+GGG - chr3_1:63724503-63724522 None:intergenic 35.0%
TCAGAATTCATACCAACTTG+AGG - chr3_1:63724504-63724523 None:intergenic 35.0%
!! TTCATTTCTAGTTCCACTCA+TGG - chr3_1:63724556-63724575 None:intergenic 35.0%
ATGCATGTGAGTAGTTTGAT+TGG - chr3_1:63724635-63724654 None:intergenic 35.0%
TCAAACTACTCACATGCATT+TGG + chr3_1:63724636-63724655 Msa0367810:CDS 35.0%
GGATGGTAGAGAATTTAAGA+TGG + chr3_1:63724838-63724857 Msa0367810:CDS 35.0%
! GTAGAGAATTTAAGATGGGT+TGG + chr3_1:63724843-63724862 Msa0367810:CDS 35.0%
GTCAAGCAATGATTTAGAGA+AGG + chr3_1:63724869-63724888 Msa0367810:CDS 35.0%
TCAAAAGGTTGTTCCAATTG+AGG + chr3_1:63725312-63725331 Msa0367810:CDS 35.0%
AACAAACAGGAAAGAGAATG+AGG + chr3_1:63725351-63725370 Msa0367810:CDS 35.0%
GTACATGTTACATATGACCA+AGG - chr3_1:63725432-63725451 None:intergenic 35.0%
TACAAGCTATGAAGTTGTTG+AGG + chr3_1:63725661-63725680 Msa0367810:CDS 35.0%
AGTTCAACTCAATCCAATTC+TGG + chr3_1:63725775-63725794 Msa0367810:CDS 35.0%
! AGAGAGTATGCTTGATTCTT+TGG - chr3_1:63725842-63725861 None:intergenic 35.0%
ATCAAGCATACTCTCTCTTA+AGG + chr3_1:63725846-63725865 Msa0367810:CDS 35.0%
CTCTCTCTTAAGGAAGTTTA+AGG + chr3_1:63725856-63725875 Msa0367810:CDS 35.0%
GGTGCTTTGTGTTTATTTGA+AGG + chr3_1:63725955-63725974 Msa0367810:CDS 35.0%
TGTTTATTTGAAGGAGCAAG+TGG + chr3_1:63725964-63725983 Msa0367810:CDS 35.0%
GGAATGAGCAAGAGAAAATT+TGG + chr3_1:63726062-63726081 Msa0367810:CDS 35.0%
!! TGGTTTGTTGGTATCAAAAG+TGG + chr3_1:63726082-63726101 Msa0367810:CDS 35.0%
GTTGGTATCAAAAGTGGTAA+AGG + chr3_1:63726088-63726107 Msa0367810:CDS 35.0%
! CAAAAGTGGTAAAGGTTTTG+AGG + chr3_1:63726096-63726115 Msa0367810:CDS 35.0%
AAAGAGCCAAAGATATGGTT+AGG - chr3_1:63726147-63726166 None:intergenic 35.0%
GAAGATCCTAAGAGAGAAAC+TGG - chr3_1:63722260-63722279 None:intergenic 40.0%
!!! TTTGGCTTGTTTTTTGTGGC+AGG + chr3_1:63722365-63722384 Msa0367810:intron 40.0%
!! TTGTGGCAGGATTTGATTTG+AGG + chr3_1:63722378-63722397 Msa0367810:intron 40.0%
!!! TTTTTTTTCCGGGTGTAACG+AGG + chr3_1:63722417-63722436 Msa0367810:five_prime_UTR 40.0%
TTTCATTGCCTCCTGGATTT+AGG + chr3_1:63722564-63722583 Msa0367810:CDS 40.0%
AAACAAGTTCTTCATCCGTG+GGG - chr3_1:63722595-63722614 None:intergenic 40.0%
GAAACAAGTTCTTCATCCGT+GGG - chr3_1:63722596-63722615 None:intergenic 40.0%
AGAAACAAGTTCTTCATCCG+TGG - chr3_1:63722597-63722616 None:intergenic 40.0%
TGATCTCCAACTCAATCCTA+CGG - chr3_1:63722646-63722665 None:intergenic 40.0%
CACTTGTAGAGATCAACTTC+AGG - chr3_1:63722671-63722690 None:intergenic 40.0%
ATCTCTACAAGTGTGAACCA+TGG + chr3_1:63722678-63722697 Msa0367810:CDS 40.0%
TCTCTACAAGTGTGAACCAT+GGG + chr3_1:63722679-63722698 Msa0367810:CDS 40.0%
! AGGGGCGTACTTAACATATT+AGG + chr3_1:63723256-63723275 Msa0367810:intron 40.0%
GGGGCGTACTTAACATATTA+GGG + chr3_1:63723257-63723276 Msa0367810:intron 40.0%
GGAGAATGGTCCTTCAAAAT+AGG + chr3_1:63723278-63723297 Msa0367810:intron 40.0%
CGTCAAGGTACATAGTAATG+AGG + chr3_1:63723315-63723334 Msa0367810:intron 40.0%
TATAGGGAAGTCATTGCTAC+CGG + chr3_1:63723514-63723533 Msa0367810:intron 40.0%
ATTGCTACCGGGAAAAGATT+TGG + chr3_1:63723526-63723545 Msa0367810:CDS 40.0%
TACCGGGAAAAGATTTGGAA+TGG + chr3_1:63723531-63723550 Msa0367810:CDS 40.0%
!! CTATTGGTTCTTGACCCATT+TGG - chr3_1:63723587-63723606 None:intergenic 40.0%
! ATTCACCTTGCGATCTTTTC+CGG - chr3_1:63723639-63723658 None:intergenic 40.0%
CGCATTCTCTTTCATCAAGA+CGG - chr3_1:63723757-63723776 None:intergenic 40.0%
AATAGAGTCTATCGTTGGAC+CGG - chr3_1:63723857-63723876 None:intergenic 40.0%
ACAGTGATTGCTCCAAAAGT+TGG + chr3_1:63724000-63724019 Msa0367810:CDS 40.0%
CAGTGATTGCTCCAAAAGTT+GGG + chr3_1:63724001-63724020 Msa0367810:CDS 40.0%
AGTGATTGCTCCAAAAGTTG+GGG + chr3_1:63724002-63724021 Msa0367810:CDS 40.0%
! ACATATTGCTCCCCAACTTT+TGG - chr3_1:63724015-63724034 None:intergenic 40.0%
! AGCATTGAGTTGTACTCTGA+AGG + chr3_1:63724084-63724103 Msa0367810:CDS 40.0%
GAAGGAAGAGATGAAGCTAT+AGG + chr3_1:63724102-63724121 Msa0367810:CDS 40.0%
GCTCAAGTTATTTGATGCCA+TGG + chr3_1:63724127-63724146 Msa0367810:CDS 40.0%
!!! TTCATGTTTTGGGATGTGCT+TGG - chr3_1:63724156-63724175 None:intergenic 40.0%
AGCACATCCCAAAACATGAA+TGG + chr3_1:63724156-63724175 Msa0367810:CDS 40.0%
GCACATCCCAAAACATGAAT+GGG + chr3_1:63724157-63724176 Msa0367810:CDS 40.0%
GAAACTAGTAGTACCTTGGA+TGG - chr3_1:63724318-63724337 None:intergenic 40.0%
ATATAGCACTAGAGTGTGCA+AGG + chr3_1:63724433-63724452 Msa0367810:CDS 40.0%
!! TTAGTTTCAGGTTCCATGAG+TGG + chr3_1:63724540-63724559 Msa0367810:CDS 40.0%
AACTACTCACATGCATTTGG+TGG + chr3_1:63724639-63724658 Msa0367810:CDS 40.0%
TGAATTCAAGGCTGAAAGGA+TGG + chr3_1:63724821-63724840 Msa0367810:CDS 40.0%
!! GCACTTGCTATTATCTTGGA+TGG - chr3_1:63725908-63725927 None:intergenic 40.0%
!!! AAGTGGTAAAGGTTTTGAGG+TGG + chr3_1:63726099-63726118 Msa0367810:CDS 40.0%
GGTACAAAGAGCCAAAGATA+TGG - chr3_1:63726152-63726171 None:intergenic 40.0%
!! TTTGGCTCTTTGTACCATGT+GGG + chr3_1:63726156-63726175 Msa0367810:CDS 40.0%
! TATCATATGGTTAGCCCACA+TGG - chr3_1:63726173-63726192 None:intergenic 40.0%
TCTCTCCCAGTTTCTCTCTT+AGG + chr3_1:63722251-63722270 Msa0367810:five_prime_UTR 45.0%
!! GGATTTGATTTGAGGCCTTG+TGG + chr3_1:63722386-63722405 Msa0367810:intron 45.0%
AATCCAGGAGGCAATGAAAC+AGG - chr3_1:63722563-63722582 None:intergenic 45.0%
TAATGGCCGTAGGATTGAGT+TGG + chr3_1:63722637-63722656 Msa0367810:CDS 45.0%
ATTATACCTGGCAAGTCCCA+TGG - chr3_1:63722698-63722717 None:intergenic 45.0%
GGTTACTGTTGTGAACGTCA+AGG + chr3_1:63723300-63723319 Msa0367810:intron 45.0%
ATAGGGAAGTCATTGCTACC+GGG + chr3_1:63723515-63723534 Msa0367810:intron 45.0%
TCTGGATATTGGAAGGCAAC+CGG + chr3_1:63723617-63723636 Msa0367810:CDS 45.0%
!! TATAGAGGAAGAGCACCACA+TGG + chr3_1:63723701-63723720 Msa0367810:CDS 45.0%
GTACTCATGCATAACCCAAC+CGG - chr3_1:63723735-63723754 None:intergenic 45.0%
GACCAGGCATGCAAATCATA+TGG + chr3_1:63724044-63724063 Msa0367810:CDS 45.0%
! TGCCATATGATTTGCATGCC+TGG - chr3_1:63724049-63724068 None:intergenic 45.0%
! ACAATGGTGGGAATGTCACA+AGG + chr3_1:63724196-63724215 Msa0367810:CDS 45.0%
! CAATGGTGGGAATGTCACAA+GGG + chr3_1:63724197-63724216 Msa0367810:CDS 45.0%
GGAATGTCACAAGGGATGAT+GGG + chr3_1:63724205-63724224 Msa0367810:CDS 45.0%
!! TCACAAGGGATGATGGGATT+TGG + chr3_1:63724211-63724230 Msa0367810:CDS 45.0%
ACCTAATTACCCTCCATCCA+AGG + chr3_1:63724302-63724321 Msa0367810:CDS 45.0%
ACCTTGGATGGAGGGTAATT+AGG - chr3_1:63724306-63724325 None:intergenic 45.0%
CTAGTAGTACCTTGGATGGA+GGG - chr3_1:63724314-63724333 None:intergenic 45.0%
ACTAGTAGTACCTTGGATGG+AGG - chr3_1:63724315-63724334 None:intergenic 45.0%
AGTGTGCAAGGATGCAACAT+AGG + chr3_1:63724445-63724464 Msa0367810:CDS 45.0%
! TAGGTTTTCTTTGCCTCCCT+TGG + chr3_1:63724464-63724483 Msa0367810:CDS 45.0%
GTGGAAGATTTCCCTCAAGT+TGG + chr3_1:63724489-63724508 Msa0367810:CDS 45.0%
AGGAAAGAGAATGAGGTGCA+AGG + chr3_1:63725358-63725377 Msa0367810:CDS 45.0%
GAAAGAACGTGTCTGCTACT+TGG - chr3_1:63725727-63725746 None:intergenic 45.0%
! GAGGTGGTCTTGAAGAAGAT+AGG + chr3_1:63726115-63726134 Msa0367810:CDS 45.0%
!! CTTTGGCTCTTTGTACCATG+TGG + chr3_1:63726155-63726174 Msa0367810:CDS 45.0%
!! GTTAATTTATTAAATATTAT+AGG - chr3_1:63725239-63725258 None:intergenic 5.0%
!! AATATTTAATAAATTAACAT+TGG + chr3_1:63725241-63725260 Msa0367810:intron 5.0%
! TGGATTTAGGTTCCACCCCA+CGG + chr3_1:63722577-63722596 Msa0367810:CDS 50.0%
!! ACATGGATCTCGTACCGGTT+GGG + chr3_1:63723718-63723737 Msa0367810:CDS 50.0%
GAATGCGACAATCCTTCTGC+TGG + chr3_1:63723770-63723789 Msa0367810:CDS 50.0%
GGGAATGTCACAAGGGATGA+TGG + chr3_1:63724204-63724223 Msa0367810:CDS 50.0%
GGATGGAGGGTAATTAGGTG+TGG - chr3_1:63724301-63724320 None:intergenic 50.0%
! GTTTTCTTTGCCTCCCTTGG+AGG + chr3_1:63724467-63724486 Msa0367810:CDS 50.0%
AAATCTTCCACCTCCAAGGG+AGG - chr3_1:63724480-63724499 None:intergenic 50.0%
GGGAAATCTTCCACCTCCAA+GGG - chr3_1:63724483-63724502 None:intergenic 50.0%
AGGGAAATCTTCCACCTCCA+AGG - chr3_1:63724484-63724503 None:intergenic 50.0%
TAGAGCTGCCTCGTTACACC+CGG - chr3_1:63722428-63722447 None:intergenic 55.0%
GCACCTGTTTCATTGCCTCC+TGG + chr3_1:63722557-63722576 Msa0367810:CDS 55.0%
GGGTGGAACCTAAATCCAGG+AGG - chr3_1:63722575-63722594 None:intergenic 55.0%
GTGGGGTGGAACCTAAATCC+AGG - chr3_1:63722578-63722597 None:intergenic 55.0%
CAAGTTCTTCATCCGTGGGG+TGG - chr3_1:63722592-63722611 None:intergenic 55.0%
TGTGAACCATGGGACTTGCC+AGG + chr3_1:63722689-63722708 Msa0367810:CDS 55.0%
GGCAACCGGAAAAGATCGCA+AGG + chr3_1:63723631-63723650 Msa0367810:CDS 55.0%
AATGCTCAGACTCGTGCCGT+TGG + chr3_1:63723656-63723675 Msa0367810:CDS 55.0%
GCACCACATGGATCTCGTAC+CGG + chr3_1:63723713-63723732 Msa0367810:CDS 55.0%
CAACCGGTACGAGATCCATG+TGG - chr3_1:63723719-63723738 None:intergenic 55.0%
! CACATGGATCTCGTACCGGT+TGG + chr3_1:63723717-63723736 Msa0367810:CDS 55.0%
!! CAATCCTTCTGCTGGCTTGC+AGG + chr3_1:63723778-63723797 Msa0367810:CDS 55.0%
CAAACCTGCAAGCCAGCAGA+AGG - chr3_1:63723785-63723804 None:intergenic 55.0%
TGGGATGTGCTTGGATCCCA+TGG - chr3_1:63724147-63724166 None:intergenic 55.0%
TTCTTTGCCTCCCTTGGAGG+TGG + chr3_1:63724470-63724489 Msa0367810:CDS 55.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 63722232 63726363 63722232 ID=Msa0367810;Name=Msa0367810
chr3_1 mRNA 63722232 63726363 63722232 ID=Msa0367810-mRNA-1;Parent=Msa0367810;Name=Msa0367810-mRNA-1;_AED=0.07;_eAED=0.07;_QI=235|1|1|1|0.83|0.71|7|159|673
chr3_1 exon 63722232 63722299 63722232 ID=Msa0367810-mRNA-1:exon:12658;Parent=Msa0367810-mRNA-1
chr3_1 exon 63722387 63722710 63722387 ID=Msa0367810-mRNA-1:exon:12659;Parent=Msa0367810-mRNA-1
chr3_1 exon 63723519 63723799 63723519 ID=Msa0367810-mRNA-1:exon:12660;Parent=Msa0367810-mRNA-1
chr3_1 exon 63723964 63724323 63723964 ID=Msa0367810-mRNA-1:exon:12661;Parent=Msa0367810-mRNA-1
chr3_1 exon 63724429 63724890 63724429 ID=Msa0367810-mRNA-1:exon:12662;Parent=Msa0367810-mRNA-1
chr3_1 exon 63725295 63725379 63725295 ID=Msa0367810-mRNA-1:exon:12663;Parent=Msa0367810-mRNA-1
chr3_1 exon 63725528 63726363 63725528 ID=Msa0367810-mRNA-1:exon:12664;Parent=Msa0367810-mRNA-1
chr3_1 five_prime_UTR 63722232 63722299 63722232 ID=Msa0367810-mRNA-1:five_prime_utr;Parent=Msa0367810-mRNA-1
chr3_1 five_prime_UTR 63722387 63722553 63722387 ID=Msa0367810-mRNA-1:five_prime_utr;Parent=Msa0367810-mRNA-1
chr3_1 CDS 63722554 63722710 63722554 ID=Msa0367810-mRNA-1:cds;Parent=Msa0367810-mRNA-1
chr3_1 CDS 63723519 63723799 63723519 ID=Msa0367810-mRNA-1:cds;Parent=Msa0367810-mRNA-1
chr3_1 CDS 63723964 63724323 63723964 ID=Msa0367810-mRNA-1:cds;Parent=Msa0367810-mRNA-1
chr3_1 CDS 63724429 63724890 63724429 ID=Msa0367810-mRNA-1:cds;Parent=Msa0367810-mRNA-1
chr3_1 CDS 63725295 63725379 63725295 ID=Msa0367810-mRNA-1:cds;Parent=Msa0367810-mRNA-1
chr3_1 CDS 63725528 63726204 63725528 ID=Msa0367810-mRNA-1:cds;Parent=Msa0367810-mRNA-1
chr3_1 three_prime_UTR 63726205 63726363 63726205 ID=Msa0367810-mRNA-1:three_prime_utr;Parent=Msa0367810-mRNA-1
Gene Sequence

>Msa0367810

ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCCACGGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAGTCATTGCTACCGGGAAAAGATTTGGAATGGTATTTTTTCAGCCCTAGAGATAGGAAGTATCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACCGGAAAAGATCGCAAGGTGAATGCTCAGACTCGTGCCGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCACATGGATCTCGTACCGGTTGGGTTATGCATGAGTACCGTCTTGATGAAAGAGAATGCGACAATCCTTCTGCTGGCTTGCAGGATGCATATGCTCTTTGCCGTATATTCAAGAAGAGTACAGTGATTGCTCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACCAGGCATGCAAATCATATGGCAAGTGATCAATCATCAAGCATTGAGTTGTACTCTGAAGGAAGAGATGAAGCTATAGGAAGCTCAAGTTATTTGATGCCATGGGATCCAAGCACATCCCAAAACATGAATGGGACTAATACTCTCAATAACAATGGTGGGAATGTCACAAGGGATGATGGGATTTGGACACAATTCTTATCAGAAGACTTACTCAATATTCCAATATCTTCATCATTTCCCAATTATGGATCCACACCTAATTACCCTCCATCCAAGGTGGATATAGCACTAGAGTGTGCAAGGATGCAACATAGGTTTTCTTTGCCTCCCTTGGAGGTGGAAGATTTCCCTCAAGTTGGTATGAATTCTGAGCTGAAGATGACACAATTAGTTTCAGGTTCCATGAGTGGAACTAGAAATGAAACAGATATCTTGCAGGAAATTCTATCTGTAGCTCAAGCTTCTCAAGAATTGATAAACCAATCAAACTACTCACATGCATTTGGTGGCAATGAAAATTATGCTACTGATCATGAAAATGACTTTACTTTTATGGTTGGAAATAATTACAATCATGTGACTGATCATATGAATTCAATGAGATATATTGATGACAAAGCATGGGAAGATCCAAACACAAGATCAATTGAAATTGGGGATCTTGATAATGAATTCAAGGCTGAAAGGATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGAGTTTTATGGATGAGCATCAAAAGGTTGTTCCAATTGAGGATATTTCAAGCTTCAAAACAAACAGGAAAGAGAATGAGGTGCAAGTAGAATCTGAGCAACCAAATATCAACAAAGAAGTCAATGATGCTAACATTGATAATTTCTCAATAGGGTTTATCAATGATAATGACCCTAATGAGAATTTTATAGATGATGGTAACATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAGGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGCCAAGTAGCAGACACGTTCTTTCACCAAATAACACCTTCACAAACAATCAAAGTTCAACTCAATCCAATTCTGGAAAATAAAAAATCTATAGAGAATGCAGAGACAATGATTATACCAAAGAATCAAGCATACTCTCTCTTAAGGAAGTTTAAGGCCAATTTGATGAAGTACATGAAAAATCCATCCAAGATAATAGCAAGTGCAATTGTGTTCATATTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGTGGAAGATATGAAACCAAAGTCAGAATATGTGAAAAGGAAATATAGCTATGGAGCTAATAGCATGAAGAAAATCATTTGGAATGAGCAAGAGAAAATTTGGTTTGTTGGTATCAAAAGTGGTAAAGGTTTTGAGGTGGTCTTGAAGAAGATAGGAATTTTCCTAACCATATCTTTGGCTCTTTGTACCATGTGGGCTAACCATATGATAGTTTGTTATTGA
Protein sequence

>Msa0367810

MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNAQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSAGLQDAYALCRIFKKSTVIAPKVGEQYVNNVTRHANHMASDQSSSIELYSEGRDEAIGSSSYLMPWDPSTSQNMNGTNTLNNNGGNVTRDDGIWTQFLSEDLLNIPISSSFPNYGSTPNYPPSKVDIALECARMQHRFSLPPLEVEDFPQVGMNSELKMTQLVSGSMSGTRNETDILQEILSVAQASQELINQSNYSHAFGGNENYATDHENDFTFMVGNNYNHVTDHMNSMRYIDDKAWEDPNTRSIEIGDLDNEFKAERMVENLRWVGMSSNDLEKSFMDEHQKVVPIEDISSFKTNRKENEVQVESEQPNINKEVNDANIDNFSIGFINDNDPNENFIDDGNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPILENKKSIENAETMIIPKNQAYSLLRKFKANLMKYMKNPSKIIASAIVFIFALFLVLCVYLKEQVEDMKPKSEYVKRKYSYGANSMKKIIWNEQEKIWFVGIKSGKGFEVVLKKIGIFLTISLALCTMWANHMIVCY*