Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0367920 | XP_003600664.2 | 93.987 | 449 | 10 | 6 | 1 | 445 | 1 | 436 | 0.0 | 835 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0367920 | sp|Q93WJ9|KAN1_ARATH | 41.882 | 425 | 150 | 15 | 1 | 405 | 1 | 348 | 2.45e-70 | 233 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0367920 | G7J8N8 | 93.987 | 449 | 10 | 6 | 1 | 445 | 1 | 436 | 0.0 | 835 |
Gene ID | Type | Classification |
---|---|---|
Msa0367920 | TF | GARP-G2-like |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0367920 | MtrunA17_Chr3g0109981 | 93.987 | 449 | 10 | 6 | 1 | 445 | 1 | 436 | 0.0 | 835 |
Msa0367920 | MtrunA17_Chr8g0366281 | 59.333 | 150 | 42 | 4 | 258 | 396 | 157 | 298 | 2.46e-48 | 170 |
Msa0367920 | MtrunA17_Chr5g0410741 | 62.821 | 156 | 40 | 5 | 256 | 401 | 201 | 348 | 1.68e-47 | 169 |
Msa0367920 | MtrunA17_Chr6g0479431 | 43.446 | 267 | 99 | 9 | 141 | 403 | 101 | 319 | 6.24e-45 | 162 |
Msa0367920 | MtrunA17_Chr1g0154261 | 58.268 | 127 | 49 | 1 | 268 | 394 | 120 | 242 | 6.51e-39 | 143 |
Msa0367920 | MtrunA17_Chr7g0243081 | 64.179 | 67 | 23 | 1 | 267 | 333 | 65 | 130 | 3.04e-21 | 95.1 |
Msa0367920 | MtrunA17_Chr1g0162931 | 65.517 | 58 | 20 | 0 | 273 | 330 | 17 | 74 | 1.88e-20 | 91.7 |
Msa0367920 | MtrunA17_Chr1g0210911 | 63.793 | 58 | 21 | 0 | 273 | 330 | 21 | 78 | 5.77e-20 | 91.3 |
Msa0367920 | MtrunA17_Chr2g0320231 | 68.966 | 58 | 18 | 0 | 273 | 330 | 96 | 153 | 1.99e-19 | 90.1 |
Msa0367920 | MtrunA17_Chr1g0190301 | 43.860 | 114 | 48 | 3 | 254 | 353 | 143 | 254 | 2.94e-19 | 89.7 |
Msa0367920 | MtrunA17_Chr8g0379121 | 67.241 | 58 | 19 | 0 | 273 | 330 | 110 | 167 | 6.73e-19 | 89.0 |
Msa0367920 | MtrunA17_Chr7g0258551 | 48.837 | 86 | 41 | 2 | 276 | 360 | 214 | 297 | 4.80e-18 | 86.3 |
Msa0367920 | MtrunA17_Chr7g0261911 | 50.000 | 86 | 43 | 0 | 275 | 360 | 263 | 348 | 7.13e-18 | 86.3 |
Msa0367920 | MtrunA17_Chr2g0288601 | 64.815 | 54 | 19 | 0 | 273 | 326 | 70 | 123 | 6.53e-17 | 77.4 |
Msa0367920 | MtrunA17_Chr3g0095611 | 58.929 | 56 | 23 | 0 | 275 | 330 | 20 | 75 | 1.08e-16 | 79.0 |
Msa0367920 | MtrunA17_Chr7g0274471 | 64.286 | 56 | 20 | 0 | 275 | 330 | 219 | 274 | 2.93e-16 | 81.3 |
Msa0367920 | MtrunA17_Chr5g0409731 | 67.925 | 53 | 17 | 0 | 275 | 327 | 26 | 78 | 3.81e-16 | 79.0 |
Msa0367920 | MtrunA17_Chr1g0175091 | 57.377 | 61 | 26 | 0 | 276 | 336 | 260 | 320 | 4.13e-16 | 80.5 |
Msa0367920 | MtrunA17_Chr2g0283951 | 61.290 | 62 | 20 | 1 | 273 | 330 | 88 | 149 | 8.74e-16 | 79.0 |
Msa0367920 | MtrunA17_Chr1g0197171 | 54.930 | 71 | 31 | 1 | 275 | 345 | 45 | 114 | 1.34e-15 | 77.4 |
Msa0367920 | MtrunA17_Chr2g0290991 | 54.286 | 70 | 31 | 1 | 275 | 344 | 40 | 108 | 1.43e-15 | 77.8 |
Msa0367920 | MtrunA17_Chr7g0254981 | 63.636 | 55 | 20 | 0 | 276 | 330 | 52 | 106 | 1.64e-15 | 77.0 |
Msa0367920 | MtrunA17_Chr8g0356501 | 51.429 | 70 | 34 | 0 | 275 | 344 | 38 | 107 | 2.18e-15 | 77.4 |
Msa0367920 | MtrunA17_Chr2g0291021 | 63.636 | 55 | 20 | 0 | 276 | 330 | 51 | 105 | 4.98e-15 | 76.3 |
Msa0367920 | MtrunA17_Chr2g0310011 | 51.429 | 70 | 34 | 0 | 275 | 344 | 36 | 105 | 5.02e-15 | 76.6 |
Msa0367920 | MtrunA17_Chr2g0321461 | 52.308 | 65 | 31 | 0 | 275 | 339 | 46 | 110 | 7.58e-15 | 76.3 |
Msa0367920 | MtrunA17_Chr6g0461641 | 54.237 | 59 | 27 | 0 | 275 | 333 | 43 | 101 | 3.39e-14 | 74.3 |
Msa0367920 | MtrunA17_Chr5g0417521 | 52.632 | 57 | 27 | 0 | 275 | 331 | 16 | 72 | 4.18e-14 | 73.9 |
Msa0367920 | MtrunA17_Chr4g0042451 | 54.386 | 57 | 26 | 0 | 275 | 331 | 18 | 74 | 9.91e-14 | 72.4 |
Msa0367920 | MtrunA17_Chr1g0175081 | 49.180 | 61 | 31 | 0 | 276 | 336 | 24 | 84 | 2.73e-13 | 66.2 |
Msa0367920 | MtrunA17_Chr1g0175071 | 38.532 | 109 | 51 | 3 | 276 | 368 | 179 | 287 | 1.03e-12 | 69.3 |
Msa0367920 | MtrunA17_Chr7g0242521 | 55.172 | 58 | 23 | 1 | 276 | 330 | 15 | 72 | 5.34e-12 | 65.9 |
Msa0367920 | MtrunA17_Chr4g0062921 | 48.529 | 68 | 35 | 0 | 273 | 340 | 234 | 301 | 1.45e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0367920 | AT5G16560.1 | 41.882 | 425 | 150 | 15 | 1 | 405 | 1 | 348 | 2.49e-71 | 233 |
Msa0367920 | AT1G32240.2 | 57.225 | 173 | 48 | 5 | 224 | 390 | 174 | 326 | 2.91e-49 | 174 |
Msa0367920 | AT1G32240.1 | 57.225 | 173 | 48 | 5 | 224 | 390 | 174 | 326 | 5.67e-49 | 173 |
Msa0367920 | AT4G17695.1 | 55.639 | 133 | 48 | 2 | 264 | 388 | 154 | 283 | 8.34e-38 | 141 |
Msa0367920 | AT5G42630.2 | 72.727 | 88 | 24 | 0 | 269 | 356 | 100 | 187 | 4.94e-36 | 134 |
Msa0367920 | AT5G42630.1 | 72.727 | 88 | 24 | 0 | 269 | 356 | 100 | 187 | 2.08e-35 | 134 |
Msa0367920 | AT2G38300.1 | 38.255 | 149 | 79 | 4 | 273 | 418 | 53 | 191 | 5.09e-21 | 94.7 |
Msa0367920 | AT4G04605.1 | 67.241 | 58 | 19 | 0 | 273 | 330 | 13 | 70 | 4.58e-20 | 89.4 |
Msa0367920 | AT2G02060.2 | 65.625 | 64 | 20 | 1 | 274 | 335 | 29 | 92 | 1.32e-19 | 89.0 |
Msa0367920 | AT2G02060.1 | 65.625 | 64 | 20 | 1 | 274 | 335 | 29 | 92 | 1.32e-19 | 89.0 |
Msa0367920 | AT2G40260.1 | 35.519 | 183 | 89 | 5 | 236 | 416 | 62 | 217 | 2.67e-19 | 90.5 |
Msa0367920 | AT1G14600.1 | 66.102 | 59 | 20 | 0 | 274 | 332 | 23 | 81 | 2.88e-19 | 87.8 |
Msa0367920 | AT4G04580.1 | 59.322 | 59 | 24 | 0 | 275 | 333 | 15 | 73 | 4.75e-18 | 82.0 |
Msa0367920 | AT2G42660.1 | 66.071 | 56 | 19 | 0 | 275 | 330 | 51 | 106 | 1.34e-17 | 83.2 |
Msa0367920 | AT5G45580.2 | 54.430 | 79 | 26 | 2 | 249 | 327 | 8 | 76 | 2.98e-17 | 82.4 |
Msa0367920 | AT4G04555.1 | 58.621 | 58 | 24 | 0 | 273 | 330 | 13 | 70 | 3.99e-17 | 77.4 |
Msa0367920 | AT5G45580.1 | 67.925 | 53 | 17 | 0 | 275 | 327 | 8 | 60 | 5.49e-17 | 81.3 |
Msa0367920 | AT4G28610.1 | 60.656 | 61 | 24 | 0 | 276 | 336 | 227 | 287 | 7.00e-16 | 80.1 |
Msa0367920 | AT3G12730.1 | 60.714 | 56 | 22 | 0 | 275 | 330 | 24 | 79 | 2.66e-15 | 75.9 |
Msa0367920 | AT2G01060.1 | 63.636 | 55 | 20 | 0 | 276 | 330 | 17 | 71 | 3.85e-15 | 76.3 |
Msa0367920 | AT3G04450.3 | 55.714 | 70 | 30 | 1 | 262 | 330 | 225 | 294 | 4.61e-15 | 76.6 |
Msa0367920 | AT1G32240.3 | 54.651 | 86 | 28 | 3 | 309 | 390 | 1 | 79 | 4.64e-15 | 72.8 |
Msa0367920 | AT5G29000.4 | 55.385 | 65 | 29 | 0 | 276 | 340 | 233 | 297 | 7.31e-15 | 75.9 |
Msa0367920 | AT4G13640.1 | 62.264 | 53 | 20 | 0 | 275 | 327 | 38 | 90 | 7.46e-15 | 75.5 |
Msa0367920 | AT4G13640.2 | 62.264 | 53 | 20 | 0 | 275 | 327 | 38 | 90 | 7.73e-15 | 75.5 |
Msa0367920 | AT5G29000.1 | 63.636 | 55 | 20 | 0 | 276 | 330 | 190 | 244 | 8.32e-15 | 76.6 |
Msa0367920 | AT5G29000.3 | 63.636 | 55 | 20 | 0 | 276 | 330 | 190 | 244 | 8.32e-15 | 76.6 |
Msa0367920 | AT3G04450.1 | 55.714 | 70 | 30 | 1 | 262 | 330 | 225 | 294 | 1.03e-14 | 76.6 |
Msa0367920 | AT3G04450.4 | 55.714 | 70 | 30 | 1 | 262 | 330 | 185 | 254 | 1.04e-14 | 76.6 |
Msa0367920 | AT3G04450.2 | 55.714 | 70 | 30 | 1 | 262 | 330 | 185 | 254 | 1.04e-14 | 76.6 |
Msa0367920 | AT1G79430.2 | 50.704 | 71 | 35 | 0 | 275 | 345 | 35 | 105 | 1.15e-14 | 75.9 |
Msa0367920 | AT3G24120.2 | 55.000 | 60 | 27 | 0 | 275 | 334 | 42 | 101 | 1.21e-14 | 75.1 |
Msa0367920 | AT3G24120.1 | 55.000 | 60 | 27 | 0 | 275 | 334 | 42 | 101 | 1.21e-14 | 75.1 |
Msa0367920 | AT5G29000.2 | 63.636 | 55 | 20 | 0 | 276 | 330 | 233 | 287 | 1.21e-14 | 76.3 |
Msa0367920 | AT5G18240.1 | 52.308 | 65 | 31 | 0 | 275 | 339 | 46 | 110 | 1.39e-14 | 76.3 |
Msa0367920 | AT5G18240.4 | 52.308 | 65 | 31 | 0 | 275 | 339 | 46 | 110 | 1.39e-14 | 76.3 |
Msa0367920 | AT5G18240.2 | 52.308 | 65 | 31 | 0 | 275 | 339 | 46 | 110 | 1.39e-14 | 75.9 |
Msa0367920 | AT5G18240.3 | 52.308 | 65 | 31 | 0 | 275 | 339 | 46 | 110 | 1.39e-14 | 75.9 |
Msa0367920 | AT5G18240.5 | 52.308 | 65 | 31 | 0 | 275 | 339 | 46 | 110 | 1.42e-14 | 75.9 |
Msa0367920 | AT3G04030.1 | 49.231 | 65 | 33 | 0 | 275 | 339 | 46 | 110 | 2.88e-14 | 75.1 |
Msa0367920 | AT5G06800.3 | 56.364 | 55 | 24 | 0 | 276 | 330 | 194 | 248 | 2.98e-14 | 73.6 |
Msa0367920 | AT3G04030.3 | 49.231 | 65 | 33 | 0 | 275 | 339 | 46 | 110 | 3.15e-14 | 75.1 |
Msa0367920 | AT2G20400.1 | 57.812 | 64 | 27 | 0 | 276 | 339 | 233 | 296 | 6.02e-14 | 73.9 |
Msa0367920 | AT5G06800.2 | 37.079 | 89 | 52 | 1 | 276 | 360 | 194 | 282 | 7.02e-14 | 73.6 |
Msa0367920 | AT5G06800.1 | 40.698 | 86 | 48 | 2 | 276 | 360 | 194 | 277 | 7.18e-14 | 73.6 |
Msa0367920 | AT2G20400.2 | 57.143 | 63 | 27 | 0 | 276 | 338 | 233 | 295 | 9.75e-14 | 73.6 |
Msa0367920 | AT2G06020.1 | 47.436 | 78 | 40 | 1 | 250 | 327 | 63 | 139 | 2.02e-13 | 71.6 |
Msa0367920 | AT3G13040.3 | 61.818 | 55 | 21 | 0 | 276 | 330 | 243 | 297 | 3.24e-13 | 72.0 |
Msa0367920 | AT3G13040.1 | 61.818 | 55 | 21 | 0 | 276 | 330 | 243 | 297 | 3.24e-13 | 72.0 |
Msa0367920 | AT3G13040.2 | 61.818 | 55 | 21 | 0 | 276 | 330 | 243 | 297 | 3.24e-13 | 72.0 |
Msa0367920 | AT1G69580.1 | 50.877 | 57 | 28 | 0 | 275 | 331 | 35 | 91 | 1.85e-12 | 68.9 |
Msa0367920 | AT1G69580.2 | 50.877 | 57 | 28 | 0 | 275 | 331 | 35 | 91 | 1.92e-12 | 68.9 |
Msa0367920 | AT2G03500.1 | 45.652 | 92 | 44 | 2 | 268 | 359 | 227 | 312 | 3.05e-12 | 68.9 |
Msa0367920 | AT3G04030.2 | 47.692 | 65 | 33 | 1 | 275 | 339 | 46 | 109 | 7.27e-12 | 67.8 |
Msa0367920 | AT1G68670.1 | 43.678 | 87 | 47 | 1 | 273 | 359 | 214 | 298 | 1.52e-11 | 66.2 |
Msa0367920 | AT5G58080.1 | 37.405 | 131 | 68 | 6 | 273 | 391 | 193 | 321 | 6.29e-11 | 65.5 |
Find 121 sgRNAs with CRISPR-Local
Find 591 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGTTCCATGGCTGGTAAAA+AGG | 0.206571 | 3_1:-63933660 | None:intergenic |
GTTCATGCTGTTGAGCTTCT+TGG | 0.223702 | 3_1:+63934055 | Msa0367920:CDS |
AGGGCATCTTCTTTAGAAAA+AGG | 0.292586 | 3_1:-63933178 | None:intergenic |
GTACTTGTCCATCGCATTCT+TGG | 0.295531 | 3_1:-63934016 | None:intergenic |
AGAATTATGAGGTTCATAAT+TGG | 0.296903 | 3_1:-63933315 | None:intergenic |
CACATGAATCACATAAATTA+TGG | 0.301972 | 3_1:+63933551 | Msa0367920:CDS |
AACTAACCTTTGATAATATA+TGG | 0.305714 | 3_1:-63933152 | None:intergenic |
GAGAGAGAGAGGAAGAAGAT+AGG | 0.319296 | 3_1:-63932657 | None:intergenic |
AGTCCTTAATATTGTGTTTG+AGG | 0.320622 | 3_1:+63932995 | Msa0367920:five_prime_UTR |
TTGTTTCGGTGAAGGATCTT+TGG | 0.321420 | 3_1:+63941673 | Msa0367920:CDS |
CATCATCATCACTCACACTA+TGG | 0.323012 | 3_1:+63933908 | Msa0367920:CDS |
AGAGAGAGAGGAAGAAGATA+GGG | 0.328501 | 3_1:-63932656 | None:intergenic |
GACGCTTCAGATGCTTCTTC+AGG | 0.341610 | 3_1:+63942415 | Msa0367920:CDS |
GAAGGAGACGGAGTTGAATT+AGG | 0.345696 | 3_1:-63933725 | None:intergenic |
CCACCATTGCTTCCAATTTG+TGG | 0.346594 | 3_1:-63935358 | None:intergenic |
GGTGTTGTTGATGTTGAAAT+TGG | 0.348173 | 3_1:-63933221 | None:intergenic |
AGTCCTCAAACACAATATTA+AGG | 0.351081 | 3_1:-63932998 | None:intergenic |
ACTCATCCACCAACACTCTA+TGG | 0.365181 | 3_1:+63935443 | Msa0367920:CDS |
ATTTGATGTCCTCCTGATAT+TGG | 0.366341 | 3_1:-63937526 | None:intergenic |
GACAAACCTGCAGCTTCTTC+AGG | 0.367603 | 3_1:+63934953 | Msa0367920:CDS |
GAGGATGATGTGCCACAAAT+TGG | 0.387455 | 3_1:+63935346 | Msa0367920:CDS |
TGGTGATATAAACACATCTT+TGG | 0.387535 | 3_1:-63933698 | None:intergenic |
TAATCCATATCTTGCTGTAT+TGG | 0.398561 | 3_1:-63935421 | None:intergenic |
TTTGGACTTGTTTGTGGCCA+TGG | 0.402795 | 3_1:-63937463 | None:intergenic |
TTCCAATCACAACCAATATC+AGG | 0.403005 | 3_1:+63937514 | Msa0367920:CDS |
ATCAGGAGGACATCAAATTC+AGG | 0.406345 | 3_1:+63937531 | Msa0367920:CDS |
TCTCTTGAATGTTCCATGGC+TGG | 0.423245 | 3_1:-63933668 | None:intergenic |
CTCCTGATATTGGTTGTGAT+TGG | 0.426736 | 3_1:-63937516 | None:intergenic |
CAAAGTCAAGAGAAAGAAGA+AGG | 0.430708 | 3_1:-63932732 | None:intergenic |
TAATTCTTCAAGAACAACTT+TGG | 0.432310 | 3_1:+63933331 | Msa0367920:CDS |
TAGACTGGAATCCCTTTGAT+TGG | 0.435250 | 3_1:-63933620 | None:intergenic |
TACTATACCTATCGGATGTT+CGG | 0.435555 | 3_1:-63941616 | None:intergenic |
TAGACCAATACAGCAAGATA+TGG | 0.437170 | 3_1:+63935417 | Msa0367920:CDS |
ATCAGTTCCAATACTGACTT+TGG | 0.438924 | 3_1:-63934405 | None:intergenic |
CTCTATGGAGTAATTCTTCA+AGG | 0.442637 | 3_1:+63935458 | Msa0367920:CDS |
CTGAAACCATCTATGTCGTT+TGG | 0.446505 | 3_1:-63937481 | None:intergenic |
TTACATCACAAGGGTCATAA+AGG | 0.448826 | 3_1:-63941551 | None:intergenic |
TTAGGCCTTTCAGATGGATC+TGG | 0.451188 | 3_1:+63935322 | Msa0367920:intron |
GTTATTAAACCTTGTGGCTA+CGG | 0.456769 | 3_1:-63933846 | None:intergenic |
TAAACCTCCTGCAGCTATGT+AGG | 0.458036 | 3_1:-63933771 | None:intergenic |
ACAAGTCCAAACGACATAGA+TGG | 0.458406 | 3_1:+63937475 | Msa0367920:CDS |
ACGCTCAAAAGATATTGTTT+CGG | 0.460394 | 3_1:+63941659 | Msa0367920:CDS |
ATGTCGTTTGGACTTGTTTG+TGG | 0.463624 | 3_1:-63937469 | None:intergenic |
TTCCGTAGTGGTTTCTTCGT+CGG | 0.466257 | 3_1:-63941706 | None:intergenic |
CACTCACACTATGGGAGTGT+TGG | 0.469128 | 3_1:+63933917 | Msa0367920:CDS |
TGAAGTGGAGAGAAGAATGA+TGG | 0.475084 | 3_1:-63932619 | None:intergenic |
TTTAAACTCAAGTGGCTCTA+CGG | 0.477786 | 3_1:+63933808 | Msa0367920:CDS |
GAGAGAGAGGAAGAAGATAG+GGG | 0.480199 | 3_1:-63932655 | None:intergenic |
ATACAATACATACCTGCAAA+TGG | 0.483907 | 3_1:-63934464 | None:intergenic |
GCTCACACTGAACTATCTCT+TGG | 0.484804 | 3_1:+63933365 | Msa0367920:CDS |
GGTTGTGATTGGAAGATAGT+TGG | 0.486453 | 3_1:-63937505 | None:intergenic |
CATGCTGTTGAGCTTCTTGG+TGG | 0.491060 | 3_1:+63934058 | Msa0367920:CDS |
AGAGGTGAAGATGACGAAGA+AGG | 0.493765 | 3_1:-63933743 | None:intergenic |
AAACCTCCTGCAGCTATGTA+GGG | 0.495440 | 3_1:-63933770 | None:intergenic |
TAGTCACGCAGATGTGCAAT+TGG | 0.500960 | 3_1:+63941575 | Msa0367920:CDS |
AAAAGATATTGTTTCGGTGA+AGG | 0.502719 | 3_1:+63941665 | Msa0367920:CDS |
GTTGTTCTTGAAGAATTATG+AGG | 0.504302 | 3_1:-63933326 | None:intergenic |
TCCGATAGGTATAGTAGATA+AGG | 0.510714 | 3_1:+63941623 | Msa0367920:CDS |
AGCTTTCCAGATTCTTTCCA+AGG | 0.514638 | 3_1:+63932922 | Msa0367920:five_prime_UTR |
TTGTAACCATATATTATCAA+AGG | 0.515599 | 3_1:+63933146 | Msa0367920:five_prime_UTR |
AAAGTCAGTATTGGAACTGA+TGG | 0.515750 | 3_1:+63934407 | Msa0367920:CDS |
TTCAATGAAAATCCCTTCCA+AGG | 0.520306 | 3_1:-63933198 | None:intergenic |
AGCAACACCAAAGTCAGTAT+TGG | 0.520531 | 3_1:+63934398 | Msa0367920:CDS |
AAGCATCCATGATGAGATCA+AGG | 0.522822 | 3_1:+63933954 | Msa0367920:CDS |
CTAAAGAAGATGCCCTTGGA+AGG | 0.522865 | 3_1:+63933185 | Msa0367920:exon |
CACTATGGGAGTGTTGGACT+TGG | 0.532107 | 3_1:+63933923 | Msa0367920:CDS |
TGGAGAGAAGAATGATGGAA+TGG | 0.532783 | 3_1:-63932614 | None:intergenic |
GAGAAGAATGATGGAATGGA+AGG | 0.535420 | 3_1:-63932610 | None:intergenic |
AGTGAGGAAAATGAGCTTGT+TGG | 0.536485 | 3_1:-63933463 | None:intergenic |
ATTACTCCATAGAGTGTTGG+TGG | 0.540356 | 3_1:-63935449 | None:intergenic |
GAAGAATTAGAAGTACTTGG+TGG | 0.543073 | 3_1:-63933269 | None:intergenic |
GGTTGTTGTTGATGTTGTTG+TGG | 0.543246 | 3_1:-63933419 | None:intergenic |
AATGAACGGTTATGATAGAC+TGG | 0.547430 | 3_1:-63933635 | None:intergenic |
TCCTTATCTACTATACCTAT+CGG | 0.548059 | 3_1:-63941624 | None:intergenic |
ATCATCATCACTCACACTAT+GGG | 0.548466 | 3_1:+63933909 | Msa0367920:CDS |
AAGGGTTAAGACCAATCAAA+GGG | 0.548805 | 3_1:+63933609 | Msa0367920:CDS |
TTCAGATGCTTCTTCAGGAG+TGG | 0.550345 | 3_1:+63942420 | Msa0367920:CDS |
AAAGAAGAATTAGAAGTACT+TGG | 0.553090 | 3_1:-63933272 | None:intergenic |
GAATGATGGAATGGAAGGGA+AGG | 0.554334 | 3_1:-63932605 | None:intergenic |
TGATGATGATGGTGGTGCAA+TGG | 0.555394 | 3_1:-63933893 | None:intergenic |
TTATGAGGTTCATAATTGGA+TGG | 0.559155 | 3_1:-63933311 | None:intergenic |
GAAGGGTTAAGACCAATCAA+AGG | 0.563565 | 3_1:+63933608 | Msa0367920:CDS |
TAAAGAAGATGCCCTTGGAA+GGG | 0.566491 | 3_1:+63933186 | Msa0367920:exon |
GTTGGATTAGGCCTTTCAGA+TGG | 0.566808 | 3_1:+63935316 | Msa0367920:intron |
CCACAAATTGGAAGCAATGG+TGG | 0.568581 | 3_1:+63935358 | Msa0367920:CDS |
GAATTACCTGAAGAAGCTGC+AGG | 0.569581 | 3_1:-63934959 | None:intergenic |
AAAGTCAAGAGAAAGAAGAA+GGG | 0.571326 | 3_1:-63932731 | None:intergenic |
AGGTTCGTTATTAAACCTTG+TGG | 0.572358 | 3_1:-63933852 | None:intergenic |
GTGTCATCAACATCATCAGA+AGG | 0.572682 | 3_1:+63933590 | Msa0367920:CDS |
TACTTCTTCGGGTTCCGTAG+TGG | 0.576637 | 3_1:-63941718 | None:intergenic |
GGATATTGATGAGATTTGAA+AGG | 0.577391 | 3_1:-63933872 | None:intergenic |
TCGGTGAAGGATCTTTGGAA+AGG | 0.577474 | 3_1:+63941678 | Msa0367920:CDS |
CTTATGTGAAGAGAAAGATC+AGG | 0.587834 | 3_1:-63933245 | None:intergenic |
AGAATTACTCCATAGAGTGT+TGG | 0.593216 | 3_1:-63935452 | None:intergenic |
GTGCCACAAATTGGAAGCAA+TGG | 0.595960 | 3_1:+63935355 | Msa0367920:CDS |
GCGTGACTAATTACATCACA+AGG | 0.597177 | 3_1:-63941561 | None:intergenic |
GAAGATGACGAAGAAGGAGA+CGG | 0.598612 | 3_1:-63933737 | None:intergenic |
ATCGAGCCGCCGTAGCCACA+AGG | 0.603124 | 3_1:+63933837 | Msa0367920:CDS |
ATTAAACCTTGTGGCTACGG+CGG | 0.603335 | 3_1:-63933843 | None:intergenic |
AAGTGCAATATTCACAAGCA+AGG | 0.606675 | 3_1:-63933051 | None:intergenic |
AGAAGAATGATGGAATGGAA+GGG | 0.611147 | 3_1:-63932609 | None:intergenic |
TATTCAAAAGCTATAGCACA+AGG | 0.614588 | 3_1:+63932855 | Msa0367920:five_prime_UTR |
AACCTCCTGCAGCTATGTAG+GGG | 0.620521 | 3_1:-63933769 | None:intergenic |
TGAGAGCACCAAGAATGCGA+TGG | 0.625062 | 3_1:+63934008 | Msa0367920:CDS |
CCTCTCCAGATCCATCTGAA+AGG | 0.630610 | 3_1:-63935327 | None:intergenic |
TTGTTGTGATGTTGAAAGTG+AGG | 0.638425 | 3_1:-63933479 | None:intergenic |
AAACTCAAGTGGCTCTACGG+CGG | 0.640611 | 3_1:+63933811 | Msa0367920:CDS |
TCAATGAAAATCCCTTCCAA+GGG | 0.641425 | 3_1:-63933197 | None:intergenic |
TGTCATCAACATCATCAGAA+GGG | 0.646503 | 3_1:+63933591 | Msa0367920:CDS |
ATTGGAACTGATGGATGTGA+AGG | 0.646666 | 3_1:+63934416 | Msa0367920:CDS |
ACCTCCTGCAGCTATGTAGG+GGG | 0.649226 | 3_1:-63933768 | None:intergenic |
CCTTTCAGATGGATCTGGAG+AGG | 0.652978 | 3_1:+63935327 | Msa0367920:CDS |
ATGTGAAGAGAAAGATCAGG+TGG | 0.665926 | 3_1:-63933242 | None:intergenic |
TCATACACCGAACATCCGAT+AGG | 0.667826 | 3_1:+63941609 | Msa0367920:CDS |
GTGAGTGATGATGATGATGG+TGG | 0.675410 | 3_1:-63933901 | None:intergenic |
ACGGAGTTGAATTAGGCATG+TGG | 0.690652 | 3_1:-63933718 | None:intergenic |
CAATCACAACCAATATCAGG+AGG | 0.694629 | 3_1:+63937517 | Msa0367920:CDS |
GTCCGACGAAGAAACCACTA+CGG | 0.701344 | 3_1:+63941704 | Msa0367920:CDS |
AGTGTGAGTGATGATGATGA+TGG | 0.709391 | 3_1:-63933904 | None:intergenic |
TGATCAGTAGTAGAGAACCA+TGG | 0.715843 | 3_1:+63937446 | Msa0367920:intron |
CGTGACTAATTACATCACAA+GGG | 0.733243 | 3_1:-63941560 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTAATTAATAAATTTATTTT+TGG | + | chr3_1:63935276-63935295 | Msa0367920:intron | 0.0% |
!! | AATATAATATATTATATATA+TGG | + | chr3_1:63941908-63941927 | Msa0367920:intron | 0.0% |
!! | ATTAAAATCAGATTAAAAAA+AGG | - | chr3_1:63933082-63933101 | None:intergenic | 10.0% |
!!! | TTTTAATCTGATTTTAATAA+AGG | + | chr3_1:63933084-63933103 | Msa0367920:five_prime_UTR | 10.0% |
!!! | TTTTTATATATATGTTTAAG+AGG | - | chr3_1:63935179-63935198 | None:intergenic | 10.0% |
!! | ATATATAAAAAATTTAAGCA+AGG | - | chr3_1:63935216-63935235 | None:intergenic | 10.0% |
!!! | TTTTTTATGAAGAATAAAAA+GGG | + | chr3_1:63935650-63935669 | Msa0367920:intron | 10.0% |
!!! | TTATATATGTTTTTTAAAGT+TGG | + | chr3_1:63936051-63936070 | Msa0367920:intron | 10.0% |
!! | GTAACATATAAATTTATAAA+TGG | + | chr3_1:63936218-63936237 | Msa0367920:intron | 10.0% |
!!! | AATATTATTTTTCCAATAAT+TGG | - | chr3_1:63937211-63937230 | None:intergenic | 10.0% |
!! | AAAAAAAATTGATCAAAAAT+AGG | - | chr3_1:63938274-63938293 | None:intergenic | 10.0% |
!! | ATTTAAATTTAAGAGAAATA+AGG | + | chr3_1:63940418-63940437 | Msa0367920:intron | 10.0% |
!!! | TATTATTCTTGTTATATATT+AGG | + | chr3_1:63940860-63940879 | Msa0367920:intron | 10.0% |
!! | TAATTCATAAGAAAATATTA+TGG | + | chr3_1:63942374-63942393 | Msa0367920:intron | 10.0% |
!! | TTAGAAGAAAAAAAAAAGAT+TGG | - | chr3_1:63932820-63932839 | None:intergenic | 15.0% |
!! | TTAAAAGAAGAAAATTAAAG+TGG | - | chr3_1:63934109-63934128 | None:intergenic | 15.0% |
!! | ATATGAAATTGAAATGAAAT+TGG | + | chr3_1:63934497-63934516 | Msa0367920:intron | 15.0% |
!! | TATGAAATTGAAATGAAATT+GGG | + | chr3_1:63934498-63934517 | Msa0367920:intron | 15.0% |
!! | ATATCTTATTCAATACAAAT+AGG | + | chr3_1:63934795-63934814 | Msa0367920:intron | 15.0% |
!! | GTAATTATTAGACTAATTAA+GGG | - | chr3_1:63935013-63935032 | None:intergenic | 15.0% |
!!! | CTTAATTAGTCTAATAATTA+CGG | + | chr3_1:63935012-63935031 | Msa0367920:intron | 15.0% |
!! | AAAAAAATGTGAAAAGAATA+AGG | - | chr3_1:63935098-63935117 | None:intergenic | 15.0% |
!! | GAGTAATTATAAATTAATGT+TGG | + | chr3_1:63935298-63935317 | Msa0367920:intron | 15.0% |
!! | TTATAAATTAATGTTGGATT+AGG | + | chr3_1:63935304-63935323 | Msa0367920:intron | 15.0% |
!!! | CTTTTTTATGAAGAATAAAA+AGG | + | chr3_1:63935649-63935668 | Msa0367920:intron | 15.0% |
!! | TATAAATTGTTAATGTTACT+TGG | - | chr3_1:63936036-63936055 | None:intergenic | 15.0% |
!! | CTTCAAATTAATTTAAACTT+AGG | - | chr3_1:63936515-63936534 | None:intergenic | 15.0% |
!! | AAATATCTTGATTACTATAA+AGG | - | chr3_1:63936732-63936751 | None:intergenic | 15.0% |
!!! | AAGATATTTTAAAAATTGAG+AGG | + | chr3_1:63936743-63936762 | Msa0367920:intron | 15.0% |
!! | TGAAAAAAGTTTATAAATTC+TGG | + | chr3_1:63937255-63937274 | Msa0367920:intron | 15.0% |
!! | GAAACCTAAAATTAATTTAA+GGG | - | chr3_1:63937646-63937665 | None:intergenic | 15.0% |
!! | TGAAACCTAAAATTAATTTA+AGG | - | chr3_1:63937647-63937666 | None:intergenic | 15.0% |
!! | AATGAAACGAAAAAAAATTT+AGG | - | chr3_1:63937737-63937756 | None:intergenic | 15.0% |
!!! | TCAATTTTTTTTCTTTCATT+CGG | + | chr3_1:63938282-63938301 | Msa0367920:intron | 15.0% |
!!! | TTTTCCAACAATTATTTTTT+TGG | + | chr3_1:63938493-63938512 | Msa0367920:intron | 15.0% |
!!! | TTTCCAACAATTATTTTTTT+GGG | + | chr3_1:63938494-63938513 | Msa0367920:intron | 15.0% |
!!! | TGATATTTGATATTTTCATA+TGG | + | chr3_1:63939135-63939154 | Msa0367920:intron | 15.0% |
!!! | ATAAAAGTTCTAAAAACATT+TGG | + | chr3_1:63939976-63939995 | Msa0367920:intron | 15.0% |
!!! | TAAAAGTTCTAAAAACATTT+GGG | + | chr3_1:63939977-63939996 | Msa0367920:intron | 15.0% |
!! | ATTAAGGAGAAAAATATTAT+AGG | + | chr3_1:63940832-63940851 | Msa0367920:intron | 15.0% |
!! | ATCTTGATTCAAATAAATAT+GGG | - | chr3_1:63941758-63941777 | None:intergenic | 15.0% |
!! | AATCTTGATTCAAATAAATA+TGG | - | chr3_1:63941759-63941778 | None:intergenic | 15.0% |
!!! | TATTTTCCCTAATAAAATAA+TGG | - | chr3_1:63941856-63941875 | None:intergenic | 15.0% |
!!! | AATAATTGTTTTAAGAGGAA+AGG | - | chr3_1:63932583-63932602 | None:intergenic | 20.0% |
!!! | AGGAAAATAATTGTTTTAAG+AGG | - | chr3_1:63932588-63932607 | None:intergenic | 20.0% |
!! | TTGTAACCATATATTATCAA+AGG | + | chr3_1:63933146-63933165 | Msa0367920:five_prime_UTR | 20.0% |
!!! | AACTAACCTTTGATAATATA+TGG | - | chr3_1:63933155-63933174 | None:intergenic | 20.0% |
!!! | ATTGTTGTTGTTATTATGTT+TGG | + | chr3_1:63934326-63934345 | Msa0367920:intron | 20.0% |
!! | CGTAATTATTAGACTAATTA+AGG | - | chr3_1:63935014-63935033 | None:intergenic | 20.0% |
!! | TTCACATATATAGACTTTAA+AGG | - | chr3_1:63935138-63935157 | None:intergenic | 20.0% |
!! | AAATTTAAGCAAGGTAATTA+AGG | - | chr3_1:63935207-63935226 | None:intergenic | 20.0% |
!! | CAAAAGTAAATAAACAAAGT+CGG | - | chr3_1:63935572-63935591 | None:intergenic | 20.0% |
!! | TCCTAATATTACAAATTTCA+AGG | + | chr3_1:63935904-63935923 | Msa0367920:intron | 20.0% |
!! | ATATATGAAGGACTTAATTT+GGG | - | chr3_1:63935998-63936017 | None:intergenic | 20.0% |
!! | AATATATGAAGGACTTAATT+TGG | - | chr3_1:63935999-63936018 | None:intergenic | 20.0% |
!! | AATACATAGTCAATATATGA+AGG | - | chr3_1:63936010-63936029 | None:intergenic | 20.0% |
!! | CTATAATTGAAATCTGTTTA+TGG | - | chr3_1:63936111-63936130 | None:intergenic | 20.0% |
!! | AAACCTAACAAATTCTAATA+TGG | + | chr3_1:63936271-63936290 | Msa0367920:intron | 20.0% |
!! | AACATATGGTAATAATTTCA+TGG | - | chr3_1:63936331-63936350 | None:intergenic | 20.0% |
!! | TTATTACCATATGTTGTATT+TGG | + | chr3_1:63936336-63936355 | Msa0367920:intron | 20.0% |
!! | TAAGTGGAAATTTAAGTAAA+GGG | - | chr3_1:63936371-63936390 | None:intergenic | 20.0% |
!! | TTAAGTGGAAATTTAAGTAA+AGG | - | chr3_1:63936372-63936391 | None:intergenic | 20.0% |
!! | TATAATTCGTGTAATTTAAG+TGG | - | chr3_1:63936387-63936406 | None:intergenic | 20.0% |
!! | ATTATATTAGAATAACCATG+TGG | + | chr3_1:63936401-63936420 | Msa0367920:intron | 20.0% |
!!! | CTTTTGCTTTTATTTTTTGA+TGG | - | chr3_1:63936451-63936470 | None:intergenic | 20.0% |
!!! | CAAAAAAAAAAAAGGTGTAT+AGG | - | chr3_1:63936541-63936560 | None:intergenic | 20.0% |
!!! | ATACACCTTTTTTTTTTTTG+AGG | + | chr3_1:63936541-63936560 | Msa0367920:intron | 20.0% |
!!! | TACACCTTTTTTTTTTTTGA+GGG | + | chr3_1:63936542-63936561 | Msa0367920:intron | 20.0% |
!! | AGATATTTCATGTTTACTTA+AGG | - | chr3_1:63936907-63936926 | None:intergenic | 20.0% |
!! | GAATTATATTTGAGTGTAAT+TGG | + | chr3_1:63937023-63937042 | Msa0367920:intron | 20.0% |
!! | AAATGAAAAACAAACACTTA+TGG | - | chr3_1:63937084-63937103 | None:intergenic | 20.0% |
!! | GGAAAAATAATATTCTACAT+TGG | + | chr3_1:63937217-63937236 | Msa0367920:intron | 20.0% |
!!! | TAGTCCCTTAAATTAATTTT+AGG | + | chr3_1:63937639-63937658 | Msa0367920:intron | 20.0% |
!!! | GACATTTTAGTTTATCATTT+CGG | + | chr3_1:63937812-63937831 | Msa0367920:intron | 20.0% |
!!! | ACATTTTAGTTTATCATTTC+GGG | + | chr3_1:63937813-63937832 | Msa0367920:intron | 20.0% |
!! | ATCTTAATATTTGTAACTTC+AGG | + | chr3_1:63937845-63937864 | Msa0367920:intron | 20.0% |
!! | ACCAAAAGAAATAATAAGAT+CGG | - | chr3_1:63938217-63938236 | None:intergenic | 20.0% |
!!! | TTATTTTTTTGGGTTGTTTT+TGG | + | chr3_1:63938504-63938523 | Msa0367920:intron | 20.0% |
!!! | TATTTTTTTGGGTTGTTTTT+GGG | + | chr3_1:63938505-63938524 | Msa0367920:intron | 20.0% |
!!! | GATCAAAGTTATATTGATTA+AGG | - | chr3_1:63938810-63938829 | None:intergenic | 20.0% |
!!! | GGAATATTTAATTTGATTTG+TGG | + | chr3_1:63939289-63939308 | Msa0367920:intron | 20.0% |
!!! | AAATCTAAGGTTAAATCATA+TGG | - | chr3_1:63939878-63939897 | None:intergenic | 20.0% |
!! | TATGATTTAACCTTAGATTT+AGG | + | chr3_1:63939878-63939897 | Msa0367920:intron | 20.0% |
!! | TCTAATAAGTTATTGAAAGT+AGG | + | chr3_1:63939902-63939921 | Msa0367920:intron | 20.0% |
!! | TAAACAAATTCAATTATCCT+TGG | - | chr3_1:63939931-63939950 | None:intergenic | 20.0% |
!!! | AGGATAATTGAATTTGTTTA+TGG | + | chr3_1:63939931-63939950 | Msa0367920:intron | 20.0% |
!!! | TAACAATGTAAGTTATTTCT+AGG | - | chr3_1:63940114-63940133 | None:intergenic | 20.0% |
!! | AGAAATAACTTACATTGTTA+AGG | + | chr3_1:63940114-63940133 | Msa0367920:intron | 20.0% |
!! | GAAATAACTTACATTGTTAA+GGG | + | chr3_1:63940115-63940134 | Msa0367920:intron | 20.0% |
!!! | AATGGTATTGATTATAAGTA+AGG | + | chr3_1:63940199-63940218 | Msa0367920:intron | 20.0% |
!! | TAAATTTAAGAGAAATAAGG+TGG | + | chr3_1:63940421-63940440 | Msa0367920:intron | 20.0% |
!!! | TTTTGTAACCCTTTAATTAT+AGG | - | chr3_1:63940546-63940565 | None:intergenic | 20.0% |
!!! | ATTTTAGCTTGATTATTCAA+TGG | + | chr3_1:63940587-63940606 | Msa0367920:intron | 20.0% |
!!! | ACAAACTTCTTATTTGATTT+AGG | + | chr3_1:63940706-63940725 | Msa0367920:intron | 20.0% |
!! | ATTATGTGTTCACTAAATTA+AGG | + | chr3_1:63940816-63940835 | Msa0367920:intron | 20.0% |
!!! | ATTTACGAAAATTTTAGTGA+TGG | + | chr3_1:63940903-63940922 | Msa0367920:intron | 20.0% |
!!! | TTTACGAAAATTTTAGTGAT+GGG | + | chr3_1:63940904-63940923 | Msa0367920:intron | 20.0% |
!! | ACTAATTAAGAATCATTCTT+AGG | - | chr3_1:63941090-63941109 | None:intergenic | 20.0% |
!!! | ATATGTGTAATTTTTCTCAT+GGG | - | chr3_1:63942099-63942118 | None:intergenic | 20.0% |
!!! | TATATGTGTAATTTTTCTCA+TGG | - | chr3_1:63942100-63942119 | None:intergenic | 20.0% |
!!! | ATATAATCAAAGCTATTTCA+TGG | + | chr3_1:63942115-63942134 | Msa0367920:intron | 20.0% |
!! | AATTCAATTAGTGCTAATTT+AGG | + | chr3_1:63942255-63942274 | Msa0367920:intron | 20.0% |
!! | AGAGTTAAGAATATATACTA+TGG | + | chr3_1:63942305-63942324 | Msa0367920:intron | 20.0% |
!! | GAGTTAAGAATATATACTAT+GGG | + | chr3_1:63942306-63942325 | Msa0367920:intron | 20.0% |
!! | AGTTAAGAATATATACTATG+GGG | + | chr3_1:63942307-63942326 | Msa0367920:intron | 20.0% |
!!! | GCTCTTTGTTTTCTTTTTTT+AGG | - | chr3_1:63932953-63932972 | None:intergenic | 25.0% |
! | TTGAACAAAAACAAAAGGAT+TGG | + | chr3_1:63933021-63933040 | Msa0367920:five_prime_UTR | 25.0% |
!!! | AAAGAAGAATTAGAAGTACT+TGG | - | chr3_1:63933275-63933294 | None:intergenic | 25.0% |
! | AGAATTATGAGGTTCATAAT+TGG | - | chr3_1:63933318-63933337 | None:intergenic | 25.0% |
! | TAATTCTTCAAGAACAACTT+TGG | + | chr3_1:63933331-63933350 | Msa0367920:CDS | 25.0% |
!!! | TTTTGATAATAAGGGTTATG+TGG | - | chr3_1:63933443-63933462 | None:intergenic | 25.0% |
!!! | CTTGTTGGTTTTGATAATAA+GGG | - | chr3_1:63933451-63933470 | None:intergenic | 25.0% |
! | CACATGAATCACATAAATTA+TGG | + | chr3_1:63933551-63933570 | Msa0367920:CDS | 25.0% |
! | GAGAAAAATGTTTACTTTCA+TGG | - | chr3_1:63934084-63934103 | None:intergenic | 25.0% |
!!! | TTATGTTTGGTGTTATAGAT+AGG | + | chr3_1:63934339-63934358 | Msa0367920:intron | 25.0% |
!! | TGATTTAGATGGTGAATTTT+AGG | + | chr3_1:63934375-63934394 | Msa0367920:intron | 25.0% |
! | TAAAATATGCATTAATCACG+AGG | - | chr3_1:63934763-63934782 | None:intergenic | 25.0% |
! | AATTTCTTGTGTTGAAATTG+TGG | + | chr3_1:63934848-63934867 | Msa0367920:intron | 25.0% |
! | GACTAATTAAGGGAAAAAAA+TGG | - | chr3_1:63935003-63935022 | None:intergenic | 25.0% |
!! | TATATATGTGAACACTTTTG+AGG | + | chr3_1:63935146-63935165 | Msa0367920:intron | 25.0% |
!!! | TATTTACTTTTGCTTTTGCA+TGG | + | chr3_1:63935580-63935599 | Msa0367920:intron | 25.0% |
! | AAGGTACAAAAGATATACAA+AGG | - | chr3_1:63935734-63935753 | None:intergenic | 25.0% |
! | GCCTTGAAATTTGTAATATT+AGG | - | chr3_1:63935908-63935927 | None:intergenic | 25.0% |
! | TCAAGATCCATATCAATATT+CGG | - | chr3_1:63935949-63935968 | None:intergenic | 25.0% |
! | TATAGTGTTACACTTCATAT+TGG | + | chr3_1:63936126-63936145 | Msa0367920:intron | 25.0% |
!! | TGTCAACTTATCAACTATTT+TGG | - | chr3_1:63936167-63936186 | None:intergenic | 25.0% |
!! | GATAAGTTGACAATATAATC+TGG | + | chr3_1:63936175-63936194 | Msa0367920:intron | 25.0% |
! | ACATTTCCAAATACAACATA+TGG | - | chr3_1:63936345-63936364 | None:intergenic | 25.0% |
!! | AGATTGATTTAGATTCAAAG+AGG | + | chr3_1:63936469-63936488 | Msa0367920:intron | 25.0% |
!! | GATTGATTTAGATTCAAAGA+GGG | + | chr3_1:63936470-63936489 | Msa0367920:intron | 25.0% |
! | CTTTCCCTCAAAAAAAAAAA+AGG | - | chr3_1:63936549-63936568 | None:intergenic | 25.0% |
! | TGTCAAAAACAAAATCAAGA+AGG | - | chr3_1:63936583-63936602 | None:intergenic | 25.0% |
! | TCTCATTAAGTAAACATTAG+TGG | + | chr3_1:63936959-63936978 | Msa0367920:intron | 25.0% |
! | AAAAAAATGCATCAGTTCAA+TGG | - | chr3_1:63937391-63937410 | None:intergenic | 25.0% |
!!! | CTGATGCATTTTTTTTTTCT+TGG | + | chr3_1:63937396-63937415 | Msa0367920:intron | 25.0% |
! | TCTAACGTTTGTAATTTAAG+GGG | - | chr3_1:63937704-63937723 | None:intergenic | 25.0% |
! | GTCTAACGTTTGTAATTTAA+GGG | - | chr3_1:63937705-63937724 | None:intergenic | 25.0% |
! | TGTCTAACGTTTGTAATTTA+AGG | - | chr3_1:63937706-63937725 | None:intergenic | 25.0% |
!!! | CATTTTAGTTTATCATTTCG+GGG | + | chr3_1:63937814-63937833 | Msa0367920:intron | 25.0% |
!! | AACAGATTTTTGCAAGTAAA+TGG | - | chr3_1:63938166-63938185 | None:intergenic | 25.0% |
! | AAAAATCTGTTTGCATTCTA+TGG | + | chr3_1:63938175-63938194 | Msa0367920:intron | 25.0% |
!!! | TCCGATCTTATTATTTCTTT+TGG | + | chr3_1:63938213-63938232 | Msa0367920:intron | 25.0% |
! | CAACCCAAAAAAATAATTGT+TGG | - | chr3_1:63938500-63938519 | None:intergenic | 25.0% |
!! | AATCTAAGACAAACAAATCT+TGG | + | chr3_1:63938540-63938559 | Msa0367920:intron | 25.0% |
! | ACTATTCAGAACAAACTAAA+AGG | - | chr3_1:63938787-63938806 | None:intergenic | 25.0% |
! | TGTCAAACTTATGACATTAT+TGG | - | chr3_1:63938842-63938861 | None:intergenic | 25.0% |
!! | AAGTTATGATTTGAGAGTTT+TGG | + | chr3_1:63939010-63939029 | Msa0367920:intron | 25.0% |
!! | TTTTCATATGGCATTTTCAA+TGG | + | chr3_1:63939147-63939166 | Msa0367920:intron | 25.0% |
! | AGTCATTTCTTGCAAAAATT+TGG | - | chr3_1:63939394-63939413 | None:intergenic | 25.0% |
! | TGAAGTTATACTTGATCATT+AGG | + | chr3_1:63939450-63939469 | Msa0367920:intron | 25.0% |
! | GAAGTTATACTTGATCATTA+GGG | + | chr3_1:63939451-63939470 | Msa0367920:intron | 25.0% |
! | CAAAATCATAGGTTATATCA+TGG | + | chr3_1:63939533-63939552 | Msa0367920:intron | 25.0% |
! | TTAAGTATGTCATATCAGAA+GGG | + | chr3_1:63939663-63939682 | Msa0367920:intron | 25.0% |
!!! | TCGTGTTAGTATTGATTTAT+AGG | + | chr3_1:63939739-63939758 | Msa0367920:intron | 25.0% |
!!! | TAGTTTGTTATAATGGACTA+TGG | - | chr3_1:63939796-63939815 | None:intergenic | 25.0% |
! | CTTATTAGATCCTAAATCTA+AGG | - | chr3_1:63939891-63939910 | None:intergenic | 25.0% |
! | GATTAGATTCTTTATAGACT+TGG | + | chr3_1:63940046-63940065 | Msa0367920:intron | 25.0% |
! | CAATAAATCTCTTATTGAGA+AGG | - | chr3_1:63940154-63940173 | None:intergenic | 25.0% |
!! | CTTTTATGGATTTGATGAAT+TGG | + | chr3_1:63940258-63940277 | Msa0367920:intron | 25.0% |
! | TGTATTTCAAGAGTAAACAA+AGG | + | chr3_1:63940337-63940356 | Msa0367920:intron | 25.0% |
!!! | AAAGGCATTATCTATATGAA+AGG | + | chr3_1:63940355-63940374 | Msa0367920:intron | 25.0% |
! | AAATTAGACTATAACCTTTG+TGG | - | chr3_1:63940402-63940421 | None:intergenic | 25.0% |
! | ACTCATTTAGACAAAATGAA+TGG | + | chr3_1:63940519-63940538 | Msa0367920:intron | 25.0% |
! | ATGAATGGACCTATAATTAA+AGG | + | chr3_1:63940534-63940553 | Msa0367920:intron | 25.0% |
! | TGAATGGACCTATAATTAAA+GGG | + | chr3_1:63940535-63940554 | Msa0367920:intron | 25.0% |
! | TGATTATTCAATGGCATTAT+TGG | + | chr3_1:63940596-63940615 | Msa0367920:intron | 25.0% |
!!! | TAGGTAAGTTGATAGATAAT+GGG | + | chr3_1:63940668-63940687 | Msa0367920:intron | 25.0% |
!! | CTTCTTATTTGATTTAGGTT+TGG | + | chr3_1:63940711-63940730 | Msa0367920:intron | 25.0% |
!! | ATTTGATTTAGGTTTGGTAT+AGG | + | chr3_1:63940717-63940736 | Msa0367920:intron | 25.0% |
!! | AAGCTTCTTAGTTAATTTTG+AGG | + | chr3_1:63940771-63940790 | Msa0367920:intron | 25.0% |
!! | AGCTTCTTAGTTAATTTTGA+GGG | + | chr3_1:63940772-63940791 | Msa0367920:intron | 25.0% |
! | ATTTAGTGAACACATAATCA+AGG | - | chr3_1:63940814-63940833 | None:intergenic | 25.0% |
! | AAGGAGAAAAATATTATAGG+AGG | + | chr3_1:63940835-63940854 | Msa0367920:intron | 25.0% |
! | TATTCGAAAGACTTTCTAAA+CGG | - | chr3_1:63941028-63941047 | None:intergenic | 25.0% |
! | TTAGGATCGATATTTATCTA+AGG | + | chr3_1:63941170-63941189 | Msa0367920:intron | 25.0% |
!! | ATTTATCTAAGGTGGAAATT+TGG | + | chr3_1:63941181-63941200 | Msa0367920:intron | 25.0% |
!!! | GATTCAAGATGTTATTTCAA+AGG | + | chr3_1:63941295-63941314 | Msa0367920:intron | 25.0% |
!! | AAGTAATAAAAAGCACACAA+AGG | + | chr3_1:63941339-63941358 | Msa0367920:intron | 25.0% |
! | ATGATGCTCGTAAAAATAAA+TGG | - | chr3_1:63941386-63941405 | None:intergenic | 25.0% |
! | AAGACAAAAATATGAAAGAC+CGG | - | chr3_1:63941523-63941542 | None:intergenic | 25.0% |
! | GTGATAAAACAAAAAATTCG+AGG | + | chr3_1:63941791-63941810 | Msa0367920:intron | 25.0% |
!!! | ACCGTTCCATTATTTTATTA+GGG | + | chr3_1:63941847-63941866 | Msa0367920:intron | 25.0% |
!! | TCCCTAATAAAATAATGGAA+CGG | - | chr3_1:63941851-63941870 | None:intergenic | 25.0% |
!! | TATGTGTAATTTTTCTCATG+GGG | - | chr3_1:63942098-63942117 | None:intergenic | 25.0% |
!!! | AACAATTTTGGGTAAAGTTT+TGG | + | chr3_1:63942142-63942161 | Msa0367920:intron | 25.0% |
!!! | ATAGACAAGTTTTATGAGAT+GGG | - | chr3_1:63942203-63942222 | None:intergenic | 25.0% |
!!! | AATAGACAAGTTTTATGAGA+TGG | - | chr3_1:63942204-63942223 | None:intergenic | 25.0% |
!! | TATATACTATGGGGATTTTA+TGG | + | chr3_1:63942316-63942335 | Msa0367920:intron | 25.0% |
!!! | TGTTTTAAGAGGAAAGGAAA+AGG | - | chr3_1:63932577-63932596 | None:intergenic | 30.0% |
AAAGTCAAGAGAAAGAAGAA+GGG | - | chr3_1:63932734-63932753 | None:intergenic | 30.0% | |
AAGCTAAGAAGAAAAAGAAG+AGG | - | chr3_1:63932786-63932805 | None:intergenic | 30.0% | |
TATTCAAAAGCTATAGCACA+AGG | + | chr3_1:63932855-63932874 | Msa0367920:five_prime_UTR | 30.0% | |
!!! | TCTTTTTTTAGGCTTTTCCT+TGG | - | chr3_1:63932942-63932961 | None:intergenic | 30.0% |
AGTCCTTAATATTGTGTTTG+AGG | + | chr3_1:63932995-63933014 | Msa0367920:five_prime_UTR | 30.0% | |
AGTCCTCAAACACAATATTA+AGG | - | chr3_1:63933001-63933020 | None:intergenic | 30.0% | |
GGACTTTGAACAAAAACAAA+AGG | + | chr3_1:63933016-63933035 | Msa0367920:five_prime_UTR | 30.0% | |
TTATGAGGTTCATAATTGGA+TGG | - | chr3_1:63933314-63933333 | None:intergenic | 30.0% | |
GTTGTTCTTGAAGAATTATG+AGG | - | chr3_1:63933329-63933348 | None:intergenic | 30.0% | |
!!! | CTTGGAAGAAATTTTAGTTG+TGG | + | chr3_1:63933383-63933402 | Msa0367920:CDS | 30.0% |
!!! | GCTTGTTGGTTTTGATAATA+AGG | - | chr3_1:63933452-63933471 | None:intergenic | 30.0% |
! | TTTTTCTCTTGAATGTTCCA+TGG | - | chr3_1:63933675-63933694 | None:intergenic | 30.0% |
TGGTGATATAAACACATCTT+TGG | - | chr3_1:63933701-63933720 | None:intergenic | 30.0% | |
CTTGAGTTTAAAAACGACAT+GGG | - | chr3_1:63933800-63933819 | None:intergenic | 30.0% | |
ACTTGAGTTTAAAAACGACA+TGG | - | chr3_1:63933801-63933820 | None:intergenic | 30.0% | |
!!! | ATGTCGTTTTTAAACTCAAG+TGG | + | chr3_1:63933800-63933819 | Msa0367920:CDS | 30.0% |
GGATATTGATGAGATTTGAA+AGG | - | chr3_1:63933875-63933894 | None:intergenic | 30.0% | |
AATCTGATACAGGTGTAAAA+TGG | - | chr3_1:63934160-63934179 | None:intergenic | 30.0% | |
TTTGGCTAATGTGATTTAGA+TGG | + | chr3_1:63934364-63934383 | Msa0367920:intron | 30.0% | |
ATACAATACATACCTGCAAA+TGG | - | chr3_1:63934467-63934486 | None:intergenic | 30.0% | |
AGTGAATATGAATGAATGTG+TGG | + | chr3_1:63934551-63934570 | Msa0367920:intron | 30.0% | |
GTGAATATGAATGAATGTGT+GGG | + | chr3_1:63934552-63934571 | Msa0367920:intron | 30.0% | |
TAGTAAGTAGTAAGCTAAGA+AGG | + | chr3_1:63934590-63934609 | Msa0367920:intron | 30.0% | |
ATGAGAGATTGTTGCATTAT+TGG | - | chr3_1:63934715-63934734 | None:intergenic | 30.0% | |
!! | GAGGTTGATGTTTGATAATA+AGG | - | chr3_1:63934744-63934763 | None:intergenic | 30.0% |
TTTAAGCAAGGTAATTAAGG+TGG | - | chr3_1:63935204-63935223 | None:intergenic | 30.0% | |
! | GTCAATTTTCAGATCAAAGA+GGG | + | chr3_1:63935386-63935405 | Msa0367920:CDS | 30.0% |
! | TAATCCATATCTTGCTGTAT+TGG | - | chr3_1:63935424-63935443 | None:intergenic | 30.0% |
!! | CTTCATAAAAAAGAGTGTTG+TGG | - | chr3_1:63935642-63935661 | None:intergenic | 30.0% |
AAGAATAAAAAGGGTTCTTG+TGG | + | chr3_1:63935659-63935678 | Msa0367920:intron | 30.0% | |
! | TCTTTTGTACCTTAGTGATT+TGG | + | chr3_1:63935741-63935760 | Msa0367920:intron | 30.0% |
! | ATAATCGAACGTTGATTAGT+AGG | + | chr3_1:63935804-63935823 | Msa0367920:intron | 30.0% |
! | ACGTTGATTAGTAGGATAAA+AGG | + | chr3_1:63935812-63935831 | Msa0367920:intron | 30.0% |
TCATAACCCGAATATTGATA+TGG | + | chr3_1:63935939-63935958 | Msa0367920:intron | 30.0% | |
CAAGATCCATATCAATATTC+GGG | - | chr3_1:63935948-63935967 | None:intergenic | 30.0% | |
!! | TTGGGTTTTATGTAATCTAC+AGG | - | chr3_1:63935980-63935999 | None:intergenic | 30.0% |
TTGCACAAATCAAGAAATAG+TGG | + | chr3_1:63936075-63936094 | Msa0367920:intron | 30.0% | |
! | GGTCCATATTAGAATTTGTT+AGG | - | chr3_1:63936277-63936296 | None:intergenic | 30.0% |
! | ACCTCTAAAAAATAGTCTAC+AGG | + | chr3_1:63936294-63936313 | Msa0367920:intron | 30.0% |
!!! | ACCTGTAGACTATTTTTTAG+AGG | - | chr3_1:63936298-63936317 | None:intergenic | 30.0% |
ATTTAAACTTAGGTGCAAGA+GGG | - | chr3_1:63936505-63936524 | None:intergenic | 30.0% | |
AATTTAAACTTAGGTGCAAG+AGG | - | chr3_1:63936506-63936525 | None:intergenic | 30.0% | |
! | ACAAAATCAAGAAGGTGTAT+AGG | - | chr3_1:63936575-63936594 | None:intergenic | 30.0% |
GATTACTATAAAGGTAGAAC+TGG | - | chr3_1:63936723-63936742 | None:intergenic | 30.0% | |
AATGACAGACAGTAGTTAAT+AGG | - | chr3_1:63936834-63936853 | None:intergenic | 30.0% | |
!! | GATAATTTGTTTGTGTCACA+AGG | - | chr3_1:63936930-63936949 | None:intergenic | 30.0% |
CATTAAGTAAACATTAGTGG+TGG | + | chr3_1:63936962-63936981 | Msa0367920:intron | 30.0% | |
AAGGCTCATAATAGTAAGTT+TGG | + | chr3_1:63937001-63937020 | Msa0367920:intron | 30.0% | |
! | TTTGAGTGTAATTGGCATTT+TGG | + | chr3_1:63937031-63937050 | Msa0367920:intron | 30.0% |
CTTATGGATGATACATTGAT+AGG | - | chr3_1:63937068-63937087 | None:intergenic | 30.0% | |
TAGTTGTAATACATAGCCTT+AGG | + | chr3_1:63937146-63937165 | Msa0367920:intron | 30.0% | |
TGTCCAACATTCATAACTTA+AGG | + | chr3_1:63937876-63937895 | Msa0367920:intron | 30.0% | |
GTCCAACATTCATAACTTAA+GGG | + | chr3_1:63937877-63937896 | Msa0367920:intron | 30.0% | |
!!! | TTTTTTTCTTTCATTCGGTG+AGG | + | chr3_1:63938287-63938306 | Msa0367920:intron | 30.0% |
!!! | TTTTTTCTTTCATTCGGTGA+GGG | + | chr3_1:63938288-63938307 | Msa0367920:intron | 30.0% |
AAGGGAAGATAATTCCTTAT+GGG | + | chr3_1:63938339-63938358 | Msa0367920:intron | 30.0% | |
AATAACCAATGTGATAGTAG+AGG | + | chr3_1:63938931-63938950 | Msa0367920:intron | 30.0% | |
GTAAATAAAGAGAGCCTATA+TGG | + | chr3_1:63939052-63939071 | Msa0367920:intron | 30.0% | |
! | CAACACATCTTTTCTATGAT+AGG | - | chr3_1:63939267-63939286 | None:intergenic | 30.0% |
TTTGATCTAATTGTACTACG+CGG | + | chr3_1:63939312-63939331 | Msa0367920:intron | 30.0% | |
ATTAGGCAACGAAATCTTAA+GGG | + | chr3_1:63939358-63939377 | Msa0367920:intron | 30.0% | |
ATTGATTATTCTTAGCGTGA+TGG | + | chr3_1:63939427-63939446 | Msa0367920:intron | 30.0% | |
GCAAACATAAATATCACAAG+TGG | + | chr3_1:63939477-63939496 | Msa0367920:intron | 30.0% | |
ACATAAATATCACAAGTGGA+TGG | + | chr3_1:63939481-63939500 | Msa0367920:intron | 30.0% | |
! | GTTCAAGTAGACAAACTTTT+GGG | + | chr3_1:63939503-63939522 | Msa0367920:intron | 30.0% |
!! | GTAGAATCAAAAGTACTCTA+TGG | - | chr3_1:63939581-63939600 | None:intergenic | 30.0% |
!! | GAGTACTTTTGATTCTACAA+TGG | + | chr3_1:63939583-63939602 | Msa0367920:intron | 30.0% |
! | TGAAAAGTATGATTTCAACG+TGG | + | chr3_1:63939640-63939659 | Msa0367920:intron | 30.0% |
GTTAAGTATGTCATATCAGA+AGG | + | chr3_1:63939662-63939681 | Msa0367920:intron | 30.0% | |
!! | TTTGTTATAATGGACTATGG+CGG | - | chr3_1:63939793-63939812 | None:intergenic | 30.0% |
!! | TTCTACTTTTGAGAAAAACG+TGG | + | chr3_1:63939845-63939864 | Msa0367920:intron | 30.0% |
!! | TTCTAGGTCATTTGATAATG+AGG | - | chr3_1:63940098-63940117 | None:intergenic | 30.0% |
TTTGTTTCCTTGAGGATTAA+TGG | + | chr3_1:63940181-63940200 | Msa0367920:intron | 30.0% | |
ATCAATACCATTAATCCTCA+AGG | - | chr3_1:63940191-63940210 | None:intergenic | 30.0% | |
ATCAAATCCATAAAAGACGT+TGG | - | chr3_1:63940254-63940273 | None:intergenic | 30.0% | |
TTAAACCTTTCTTAGACAGA+TGG | + | chr3_1:63940286-63940305 | Msa0367920:intron | 30.0% | |
TAAACCTTTCTTAGACAGAT+GGG | + | chr3_1:63940287-63940306 | Msa0367920:intron | 30.0% | |
TAGATTTATAACAGCCACAA+AGG | + | chr3_1:63940385-63940404 | Msa0367920:intron | 30.0% | |
ATGAAGTCTCTTAAAAGACT+TGG | + | chr3_1:63940444-63940463 | Msa0367920:intron | 30.0% | |
!! | TTGTTGTAGATGTTTTGAGT+AGG | + | chr3_1:63940478-63940497 | Msa0367920:intron | 30.0% |
!! | TGTTTTGAGTAGGAAAAACA+TGG | + | chr3_1:63940488-63940507 | Msa0367920:intron | 30.0% |
AAAGGGTTACAAAAACTTGT+TGG | + | chr3_1:63940552-63940571 | Msa0367920:intron | 30.0% | |
CACCATAGTTTACAATATCA+GGG | + | chr3_1:63940637-63940656 | Msa0367920:intron | 30.0% | |
!! | GTAGGTAAGTTGATAGATAA+TGG | + | chr3_1:63940667-63940686 | Msa0367920:intron | 30.0% |
TATAGGTGGTATATAATGTG+TGG | + | chr3_1:63940734-63940753 | Msa0367920:intron | 30.0% | |
!!! | TTAATTTTGAGGGTGTTTTG+TGG | + | chr3_1:63940782-63940801 | Msa0367920:intron | 30.0% |
!! | GAAAATTTTAGTGATGGGAA+GGG | + | chr3_1:63940909-63940928 | Msa0367920:intron | 30.0% |
! | AGGTTTTACAGAGATTCAAT+CGG | - | chr3_1:63941063-63941082 | None:intergenic | 30.0% |
AAGAATCATTCTTAGGATGA+AGG | - | chr3_1:63941083-63941102 | None:intergenic | 30.0% | |
! | ACTTTTGTTCTTGAACTTTG+AGG | + | chr3_1:63941144-63941163 | Msa0367920:intron | 30.0% |
! | CTTTTGTTCTTGAACTTTGA+GGG | + | chr3_1:63941145-63941164 | Msa0367920:intron | 30.0% |
GTAACATCTAAACACTAGAT+TGG | - | chr3_1:63941222-63941241 | None:intergenic | 30.0% | |
AAGATAAGACCAAAGTTCTT+TGG | + | chr3_1:63941439-63941458 | Msa0367920:intron | 30.0% | |
AGATAAGACCAAAGTTCTTT+GGG | + | chr3_1:63941440-63941459 | Msa0367920:intron | 30.0% | |
TTAAGGTTGTAGCTTATTGT+TGG | + | chr3_1:63941467-63941486 | Msa0367920:intron | 30.0% | |
TAAGGTTGTAGCTTATTGTT+GGG | + | chr3_1:63941468-63941487 | Msa0367920:intron | 30.0% | |
TCCTTATCTACTATACCTAT+CGG | - | chr3_1:63941627-63941646 | None:intergenic | 30.0% | |
ACGCTCAAAAGATATTGTTT+CGG | + | chr3_1:63941659-63941678 | Msa0367920:CDS | 30.0% | |
AAAAGATATTGTTTCGGTGA+AGG | + | chr3_1:63941665-63941684 | Msa0367920:CDS | 30.0% | |
!! | CACCGTTCCATTATTTTATT+AGG | + | chr3_1:63941846-63941865 | Msa0367920:intron | 30.0% |
AGAAAATGAAAAGGAAAGGT+GGG | - | chr3_1:63942033-63942052 | None:intergenic | 30.0% | |
GAAGAGAAAATGAAAAGGAA+AGG | - | chr3_1:63942037-63942056 | None:intergenic | 30.0% | |
AGGAAGAAGAGAAAATGAAA+AGG | - | chr3_1:63942042-63942061 | None:intergenic | 30.0% | |
! | TTTCATGGCACAAACAATTT+TGG | + | chr3_1:63942130-63942149 | Msa0367920:intron | 30.0% |
! | TTCATGGCACAAACAATTTT+GGG | + | chr3_1:63942131-63942150 | Msa0367920:intron | 30.0% |
! | AGAAGAATGATGGAATGGAA+GGG | - | chr3_1:63932612-63932631 | None:intergenic | 35.0% |
! | CTCATCACACTTTTCTTTCA+TGG | + | chr3_1:63932707-63932726 | Msa0367920:intron | 35.0% |
CAAAGTCAAGAGAAAGAAGA+AGG | - | chr3_1:63932735-63932754 | None:intergenic | 35.0% | |
AGAAGAAAAAGAAGAGGTCA+TGG | - | chr3_1:63932780-63932799 | None:intergenic | 35.0% | |
AAGTGCAATATTCACAAGCA+AGG | - | chr3_1:63933054-63933073 | None:intergenic | 35.0% | |
! | GCATCTTCTTTAGAAAAAGG+TGG | - | chr3_1:63933178-63933197 | None:intergenic | 35.0% |
! | AGGGCATCTTCTTTAGAAAA+AGG | - | chr3_1:63933181-63933200 | None:intergenic | 35.0% |
!! | TTTTCTAAAGAAGATGCCCT+TGG | + | chr3_1:63933181-63933200 | Msa0367920:exon | 35.0% |
TCAATGAAAATCCCTTCCAA+GGG | - | chr3_1:63933200-63933219 | None:intergenic | 35.0% | |
TTCAATGAAAATCCCTTCCA+AGG | - | chr3_1:63933201-63933220 | None:intergenic | 35.0% | |
!! | GGTGTTGTTGATGTTGAAAT+TGG | - | chr3_1:63933224-63933243 | None:intergenic | 35.0% |
CTTATGTGAAGAGAAAGATC+AGG | - | chr3_1:63933248-63933267 | None:intergenic | 35.0% | |
!! | GAAGAATTAGAAGTACTTGG+TGG | - | chr3_1:63933272-63933291 | None:intergenic | 35.0% |
TTGTTGTGATGTTGAAAGTG+AGG | - | chr3_1:63933482-63933501 | None:intergenic | 35.0% | |
TGTCATCAACATCATCAGAA+GGG | + | chr3_1:63933591-63933610 | Msa0367920:CDS | 35.0% | |
AAGGGTTAAGACCAATCAAA+GGG | + | chr3_1:63933609-63933628 | Msa0367920:CDS | 35.0% | |
AATGAACGGTTATGATAGAC+TGG | - | chr3_1:63933638-63933657 | None:intergenic | 35.0% | |
! | TTTAAACTCAAGTGGCTCTA+CGG | + | chr3_1:63933808-63933827 | Msa0367920:CDS | 35.0% |
GTTATTAAACCTTGTGGCTA+CGG | - | chr3_1:63933849-63933868 | None:intergenic | 35.0% | |
AGGTTCGTTATTAAACCTTG+TGG | - | chr3_1:63933855-63933874 | None:intergenic | 35.0% | |
ATCATCATCACTCACACTAT+GGG | + | chr3_1:63933909-63933928 | Msa0367920:CDS | 35.0% | |
CAAAAACCTTGATCTCATCA+TGG | - | chr3_1:63933963-63933982 | None:intergenic | 35.0% | |
! | CTTCTTTTTGTCGGCAATTT+AGG | - | chr3_1:63933986-63934005 | None:intergenic | 35.0% |
ACGAAGATCAAATCTGATAC+AGG | - | chr3_1:63934170-63934189 | None:intergenic | 35.0% | |
CTTGTGAGAGTAAGACTATT+AGG | + | chr3_1:63934269-63934288 | Msa0367920:intron | 35.0% | |
TGAGAGTAAGACTATTAGGT+GGG | + | chr3_1:63934273-63934292 | Msa0367920:intron | 35.0% | |
!! | TGGTGTTATAGATAGGTGTT+TGG | + | chr3_1:63934346-63934365 | Msa0367920:intron | 35.0% |
!! | ATCAGTTCCAATACTGACTT+TGG | - | chr3_1:63934408-63934427 | None:intergenic | 35.0% |
! | AAAGTCAGTATTGGAACTGA+TGG | + | chr3_1:63934407-63934426 | Msa0367920:CDS | 35.0% |
TCATGTAAAAAGCCATTTGC+AGG | + | chr3_1:63934452-63934471 | Msa0367920:CDS | 35.0% | |
ATAGCCAATGAAGAAGAAAG+TGG | + | chr3_1:63934525-63934544 | Msa0367920:intron | 35.0% | |
! | CGTCAATTTTCAGATCAAAG+AGG | + | chr3_1:63935385-63935404 | Msa0367920:CDS | 35.0% |
TAGACCAATACAGCAAGATA+TGG | + | chr3_1:63935417-63935436 | Msa0367920:CDS | 35.0% | |
AGAATTACTCCATAGAGTGT+TGG | - | chr3_1:63935455-63935474 | None:intergenic | 35.0% | |
CTCTATGGAGTAATTCTTCA+AGG | + | chr3_1:63935458-63935477 | Msa0367920:CDS | 35.0% | |
! | TTTGTACCTTAGTGATTTGG+TGG | + | chr3_1:63935744-63935763 | Msa0367920:intron | 35.0% |
CAAACATACACACAAGTCAA+AGG | - | chr3_1:63935882-63935901 | None:intergenic | 35.0% | |
AGGCATGTCTTTCTCTTATT+AGG | + | chr3_1:63936763-63936782 | Msa0367920:intron | 35.0% | |
TAAGTAAACATTAGTGGTGG+TGG | + | chr3_1:63936965-63936984 | Msa0367920:intron | 35.0% | |
TTACTATTATGAGCCTTGCA+TGG | - | chr3_1:63936998-63937017 | None:intergenic | 35.0% | |
! | GTAATACATAGCCTTAGGAT+TGG | + | chr3_1:63937151-63937170 | Msa0367920:intron | 35.0% |
TACCACTTAAACCAATCCTA+AGG | - | chr3_1:63937165-63937184 | None:intergenic | 35.0% | |
ATAATTGGAGATGCTCTTGA+TGG | - | chr3_1:63937196-63937215 | None:intergenic | 35.0% | |
!! | TCAAGAGCATCTCCAATTAT+TGG | + | chr3_1:63937196-63937215 | Msa0367920:intron | 35.0% |
!! | TGCATGAACTGTTTTGTTGA+TGG | - | chr3_1:63937347-63937366 | None:intergenic | 35.0% |
CAAAACAGTTCATGCATGTT+TGG | + | chr3_1:63937351-63937370 | Msa0367920:intron | 35.0% | |
TTCCAATCACAACCAATATC+AGG | + | chr3_1:63937514-63937533 | Msa0367920:CDS | 35.0% | |
ATTTGATGTCCTCCTGATAT+TGG | - | chr3_1:63937529-63937548 | None:intergenic | 35.0% | |
GTCCCTTAAGTTATGAATGT+TGG | - | chr3_1:63937882-63937901 | None:intergenic | 35.0% | |
ATTCTATGTCTGCAGCTATT+AGG | - | chr3_1:63938105-63938124 | None:intergenic | 35.0% | |
CTGCAGACATAGAATGAAAA+TGG | + | chr3_1:63938110-63938129 | Msa0367920:intron | 35.0% | |
CTAGTGGTGATCATAGAATT+GGG | - | chr3_1:63938319-63938338 | None:intergenic | 35.0% | |
TCTAGTGGTGATCATAGAAT+TGG | - | chr3_1:63938320-63938339 | None:intergenic | 35.0% | |
ATTCTATGATCACCACTAGA+AGG | + | chr3_1:63938320-63938339 | Msa0367920:intron | 35.0% | |
TTCTATGATCACCACTAGAA+GGG | + | chr3_1:63938321-63938340 | Msa0367920:intron | 35.0% | |
GAAGGGAAGATAATTCCTTA+TGG | + | chr3_1:63938338-63938357 | Msa0367920:intron | 35.0% | |
TTGACTAGGATCTTAAGGTT+GGG | - | chr3_1:63938372-63938391 | None:intergenic | 35.0% | |
TTTGACTAGGATCTTAAGGT+TGG | - | chr3_1:63938373-63938392 | None:intergenic | 35.0% | |
AAAGAGGTTGTGGTTTCTTA+TGG | + | chr3_1:63938390-63938409 | Msa0367920:intron | 35.0% | |
GATTGTAAGAGTAGTTAGTG+TGG | + | chr3_1:63938437-63938456 | Msa0367920:intron | 35.0% | |
CTAAGACAAACAAATCTTGG+CGG | + | chr3_1:63938543-63938562 | Msa0367920:intron | 35.0% | |
CAAATGACAATTGAAGTACG+AGG | + | chr3_1:63938746-63938765 | Msa0367920:intron | 35.0% | |
TTGAAGTACGAGGAATATGT+TGG | + | chr3_1:63938756-63938775 | Msa0367920:intron | 35.0% | |
GTCATAAGTTTGACAGTTCA+AGG | + | chr3_1:63938847-63938866 | Msa0367920:intron | 35.0% | |
AATCAAGATCTGCTCCATAT+AGG | - | chr3_1:63939069-63939088 | None:intergenic | 35.0% | |
! | CTTGATTCAGTTAAGTTGTG+CGG | + | chr3_1:63939082-63939101 | Msa0367920:intron | 35.0% |
! | TCAATGGATTCTCACTAGTA+CGG | + | chr3_1:63939163-63939182 | Msa0367920:intron | 35.0% |
ACTTGTTTGATAGAGCTCAT+AGG | + | chr3_1:63939229-63939248 | Msa0367920:intron | 35.0% | |
TCATAGAAAAGATGTGTTGC+TGG | + | chr3_1:63939268-63939287 | Msa0367920:intron | 35.0% | |
GATTAGGCAACGAAATCTTA+AGG | + | chr3_1:63939357-63939376 | Msa0367920:intron | 35.0% | |
! | GGTTCAAGTAGACAAACTTT+TGG | + | chr3_1:63939502-63939521 | Msa0367920:intron | 35.0% |
ACTATTATCTAGTCATGCGT+TGG | + | chr3_1:63939710-63939729 | Msa0367920:intron | 35.0% | |
!! | CTCTCGCTAGTTTGTTATAA+TGG | - | chr3_1:63939803-63939822 | None:intergenic | 35.0% |
!! | ACTTTTGAGAAAAACGTGGT+TGG | + | chr3_1:63939849-63939868 | Msa0367920:intron | 35.0% |
!! | CTTTTGAGAAAAACGTGGTT+GGG | + | chr3_1:63939850-63939869 | Msa0367920:intron | 35.0% |
TTATTGAAAGTAGGTTGCCA+AGG | + | chr3_1:63939911-63939930 | Msa0367920:intron | 35.0% | |
TGATGTTGTCTTGAACTTCT+TGG | + | chr3_1:63940005-63940024 | Msa0367920:intron | 35.0% | |
! | TGATAATGAGGTATGGATGT+GGG | - | chr3_1:63940086-63940105 | None:intergenic | 35.0% |
!! | TTGATAATGAGGTATGGATG+TGG | - | chr3_1:63940087-63940106 | None:intergenic | 35.0% |
!! | GGTCATTTGATAATGAGGTA+TGG | - | chr3_1:63940093-63940112 | None:intergenic | 35.0% |
ATCCTCAAGGAAACAAACTT+AGG | - | chr3_1:63940178-63940197 | None:intergenic | 35.0% | |
! | TAATGCTCCAACGTCTTTTA+TGG | + | chr3_1:63940244-63940263 | Msa0367920:intron | 35.0% |
TTGAGTAGGAAAAACATGGA+TGG | + | chr3_1:63940492-63940511 | Msa0367920:intron | 35.0% | |
TGAGTAGGAAAAACATGGAT+GGG | + | chr3_1:63940493-63940512 | Msa0367920:intron | 35.0% | |
CCTGATATTGTAAACTATGG+TGG | - | chr3_1:63940639-63940658 | None:intergenic | 35.0% | |
CCACCATAGTTTACAATATC+AGG | + | chr3_1:63940636-63940655 | Msa0367920:intron | 35.0% | |
CTCCCTGATATTGTAAACTA+TGG | - | chr3_1:63940642-63940661 | None:intergenic | 35.0% | |
TTTACAATATCAGGGAGACT+CGG | + | chr3_1:63940645-63940664 | Msa0367920:intron | 35.0% | |
!! | GTAAGTTGATAGATAATGGG+AGG | + | chr3_1:63940671-63940690 | Msa0367920:intron | 35.0% |
! | TGATTTAGGTTTGGTATAGG+TGG | + | chr3_1:63940720-63940739 | Msa0367920:intron | 35.0% |
!! | CGAAAATTTTAGTGATGGGA+AGG | + | chr3_1:63940908-63940927 | Msa0367920:intron | 35.0% |
TAATCACATGTAGCAGAGAT+CGG | - | chr3_1:63940986-63941005 | None:intergenic | 35.0% | |
! | GGTTTTACAGAGATTCAATC+GGG | - | chr3_1:63941062-63941081 | None:intergenic | 35.0% |
GAAAGTTATACACATCCTAG+AGG | + | chr3_1:63941110-63941129 | Msa0367920:intron | 35.0% | |
! | TCTTGAACTTTGAGGGATTT+AGG | + | chr3_1:63941152-63941171 | Msa0367920:intron | 35.0% |
GGATCGATATTTATCTAAGG+TGG | + | chr3_1:63941173-63941192 | Msa0367920:intron | 35.0% | |
TAGTGTTTAGATGTTACCCT+TGG | + | chr3_1:63941225-63941244 | Msa0367920:intron | 35.0% | |
AGTGTTTAGATGTTACCCTT+GGG | + | chr3_1:63941226-63941245 | Msa0367920:intron | 35.0% | |
TTACGAGCATCATTAGTAGA+AGG | + | chr3_1:63941393-63941412 | Msa0367920:intron | 35.0% | |
TTAAACGTCCCAAAGAACTT+TGG | - | chr3_1:63941451-63941470 | None:intergenic | 35.0% | |
!! | AAAGTTCTTTGGGACGTTTA+AGG | + | chr3_1:63941450-63941469 | Msa0367920:intron | 35.0% |
TTACATCACAAGGGTCATAA+AGG | - | chr3_1:63941554-63941573 | None:intergenic | 35.0% | |
CGTGACTAATTACATCACAA+GGG | - | chr3_1:63941563-63941582 | None:intergenic | 35.0% | |
TACTATACCTATCGGATGTT+CGG | - | chr3_1:63941619-63941638 | None:intergenic | 35.0% | |
TCCGATAGGTATAGTAGATA+AGG | + | chr3_1:63941623-63941642 | Msa0367920:CDS | 35.0% | |
! | TTTTGACGCATTACTTCTTC+GGG | - | chr3_1:63941732-63941751 | None:intergenic | 35.0% |
! | CTTTTGACGCATTACTTCTT+CGG | - | chr3_1:63941733-63941752 | None:intergenic | 35.0% |
! | TTCGAGGACGAATTTTCTTA+AGG | + | chr3_1:63941807-63941826 | Msa0367920:intron | 35.0% |
! | TCGAGGACGAATTTTCTTAA+GGG | + | chr3_1:63941808-63941827 | Msa0367920:intron | 35.0% |
GAGAAAATGAAAAGGAAAGG+TGG | - | chr3_1:63942034-63942053 | None:intergenic | 35.0% | |
!! | GTTTGATTTGGTGATGGAAT+TGG | - | chr3_1:63942076-63942095 | None:intergenic | 35.0% |
! | TTTTCTCATGGGGTTTGATT+TGG | - | chr3_1:63942088-63942107 | None:intergenic | 35.0% |
!!! | TTTGGGTAAAGTTTTGGAGT+TGG | + | chr3_1:63942148-63942167 | Msa0367920:intron | 35.0% |
TTGTCTATTGAGACTCTTTG+AGG | + | chr3_1:63942215-63942234 | Msa0367920:intron | 35.0% | |
! | GAGAAGAATGATGGAATGGA+AGG | - | chr3_1:63932613-63932632 | None:intergenic | 40.0% |
! | TGGAGAGAAGAATGATGGAA+TGG | - | chr3_1:63932617-63932636 | None:intergenic | 40.0% |
TGAAGTGGAGAGAAGAATGA+TGG | - | chr3_1:63932622-63932641 | None:intergenic | 40.0% | |
!!! | GGAAGACTAGTGTTTTGAAG+TGG | - | chr3_1:63932637-63932656 | None:intergenic | 40.0% |
AGAGAGAGAGGAAGAAGATA+GGG | - | chr3_1:63932659-63932678 | None:intergenic | 40.0% | |
AGCTTTCCAGATTCTTTCCA+AGG | + | chr3_1:63932922-63932941 | Msa0367920:five_prime_UTR | 40.0% | |
! | GCTTTTCCTTGGAAAGAATC+TGG | - | chr3_1:63932931-63932950 | None:intergenic | 40.0% |
TAAAGAAGATGCCCTTGGAA+GGG | + | chr3_1:63933186-63933205 | Msa0367920:exon | 40.0% | |
ATGTGAAGAGAAAGATCAGG+TGG | - | chr3_1:63933245-63933264 | None:intergenic | 40.0% | |
! | GGTTGTTGTTGATGTTGTTG+TGG | - | chr3_1:63933422-63933441 | None:intergenic | 40.0% |
AGTGAGGAAAATGAGCTTGT+TGG | - | chr3_1:63933466-63933485 | None:intergenic | 40.0% | |
GTGTCATCAACATCATCAGA+AGG | + | chr3_1:63933590-63933609 | Msa0367920:CDS | 40.0% | |
GAAGGGTTAAGACCAATCAA+AGG | + | chr3_1:63933608-63933627 | Msa0367920:CDS | 40.0% | |
TAGACTGGAATCCCTTTGAT+TGG | - | chr3_1:63933623-63933642 | None:intergenic | 40.0% | |
CTGGTAAAAAGGGGAATGAA+CGG | - | chr3_1:63933652-63933671 | None:intergenic | 40.0% | |
TGTTCCATGGCTGGTAAAAA+GGG | - | chr3_1:63933662-63933681 | None:intergenic | 40.0% | |
ATGTTCCATGGCTGGTAAAA+AGG | - | chr3_1:63933663-63933682 | None:intergenic | 40.0% | |
! | AGTGTGAGTGATGATGATGA+TGG | - | chr3_1:63933907-63933926 | None:intergenic | 40.0% |
CATCATCATCACTCACACTA+TGG | + | chr3_1:63933908-63933927 | Msa0367920:CDS | 40.0% | |
AAGCATCCATGATGAGATCA+AGG | + | chr3_1:63933954-63933973 | Msa0367920:CDS | 40.0% | |
! | GCTCTCATGCTTCTTTTTGT+CGG | - | chr3_1:63933995-63934014 | None:intergenic | 40.0% |
GTGAGAGTAAGACTATTAGG+TGG | + | chr3_1:63934272-63934291 | Msa0367920:intron | 40.0% | |
AGCAACACCAAAGTCAGTAT+TGG | + | chr3_1:63934398-63934417 | Msa0367920:CDS | 40.0% | |
! | ATTGGAACTGATGGATGTGA+AGG | + | chr3_1:63934416-63934435 | Msa0367920:CDS | 40.0% |
TGCACCACTTTCTTCTTCAT+TGG | - | chr3_1:63934532-63934551 | None:intergenic | 40.0% | |
TATGAATGAATGTGTGGGAG+TGG | + | chr3_1:63934557-63934576 | Msa0367920:intron | 40.0% | |
!! | ATTACTCCATAGAGTGTTGG+TGG | - | chr3_1:63935452-63935471 | None:intergenic | 40.0% |
!! | AAAAAGAGTGTTGTGGACGT+GGG | - | chr3_1:63935635-63935654 | None:intergenic | 40.0% |
!! | AAAAAAGAGTGTTGTGGACG+TGG | - | chr3_1:63935636-63935655 | None:intergenic | 40.0% |
!! | ACCTTAGTGATTTGGTGGAT+TGG | + | chr3_1:63935749-63935768 | Msa0367920:intron | 40.0% |
ACCAATCCACCAAATCACTA+AGG | - | chr3_1:63935753-63935772 | None:intergenic | 40.0% | |
!! | AGCCTTAGGATTGGTTTAAG+TGG | + | chr3_1:63937160-63937179 | Msa0367920:intron | 40.0% |
TGATCAGTAGTAGAGAACCA+TGG | + | chr3_1:63937446-63937465 | Msa0367920:intron | 40.0% | |
! | ATGTCGTTTGGACTTGTTTG+TGG | - | chr3_1:63937472-63937491 | None:intergenic | 40.0% |
ACAAGTCCAAACGACATAGA+TGG | + | chr3_1:63937475-63937494 | Msa0367920:CDS | 40.0% | |
CTGAAACCATCTATGTCGTT+TGG | - | chr3_1:63937484-63937503 | None:intergenic | 40.0% | |
GGTTGTGATTGGAAGATAGT+TGG | - | chr3_1:63937508-63937527 | None:intergenic | 40.0% | |
! | CTCCTGATATTGGTTGTGAT+TGG | - | chr3_1:63937519-63937538 | None:intergenic | 40.0% |
CAATCACAACCAATATCAGG+AGG | + | chr3_1:63937517-63937536 | Msa0367920:CDS | 40.0% | |
ATCAGGAGGACATCAAATTC+AGG | + | chr3_1:63937531-63937550 | Msa0367920:CDS | 40.0% | |
!! | NNAAATTCTAGTTCGTGCGC+CGG | + | chr3_1:63938023-63938042 | Msa0367920:intron | 40.0% |
CCAAAATTCACAATCGTGAC+CGG | - | chr3_1:63938045-63938064 | None:intergenic | 40.0% | |
! | CGGTCACGATTGTGAATTTT+GGG | + | chr3_1:63938043-63938062 | Msa0367920:intron | 40.0% |
!! | ATTTTGGGTCGTGACAAAGT+TGG | + | chr3_1:63938058-63938077 | Msa0367920:intron | 40.0% |
TGCTAGTAAATTGTGAACCG+CGG | + | chr3_1:63938138-63938157 | Msa0367920:intron | 40.0% | |
GGAATTATCTTCCCTTCTAG+TGG | - | chr3_1:63938335-63938354 | None:intergenic | 40.0% | |
CCTCTTTGACTAGGATCTTA+AGG | - | chr3_1:63938377-63938396 | None:intergenic | 40.0% | |
CCTTAAGATCCTAGTCAAAG+AGG | + | chr3_1:63938374-63938393 | Msa0367920:intron | 40.0% | |
AAACCACAACCTCTTTGACT+AGG | - | chr3_1:63938386-63938405 | None:intergenic | 40.0% | |
TGTAAGAGTAGTTAGTGTGG+AGG | + | chr3_1:63938440-63938459 | Msa0367920:intron | 40.0% | |
!! | GTCTTGTTTGGAGTATGTCT+AGG | - | chr3_1:63938631-63938650 | None:intergenic | 40.0% |
!! | GTCTTTCGTATGGTCTTGTT+TGG | - | chr3_1:63938643-63938662 | None:intergenic | 40.0% |
ACCATACGAAAGACCTTTCT+AGG | + | chr3_1:63938649-63938668 | Msa0367920:intron | 40.0% | |
TCCTAGAAAGGTCTTTCGTA+TGG | - | chr3_1:63938653-63938672 | None:intergenic | 40.0% | |
ACTCGTCACTCACTAAGATA+GGG | - | chr3_1:63938708-63938727 | None:intergenic | 40.0% | |
TACTCGTCACTCACTAAGAT+AGG | - | chr3_1:63938709-63938728 | None:intergenic | 40.0% | |
CAACACCTCTACTATCACAT+TGG | - | chr3_1:63938939-63938958 | None:intergenic | 40.0% | |
!! | GTGATAGTAGAGGTGTTGTT+TGG | + | chr3_1:63938941-63938960 | Msa0367920:intron | 40.0% |
! | AGTTAAGTTGTGCGGAAGTT+CGG | + | chr3_1:63939090-63939109 | Msa0367920:intron | 40.0% |
!!! | ACGGAGGATATGTCACTTTT+AGG | + | chr3_1:63939199-63939218 | Msa0367920:intron | 40.0% |
!!! | CGGAGGATATGTCACTTTTA+GGG | + | chr3_1:63939200-63939219 | Msa0367920:intron | 40.0% |
TGAACCTGACACTTCAGATT+AGG | + | chr3_1:63939341-63939360 | Msa0367920:intron | 40.0% | |
! | CAAGTAGACAAACTTTTGGG+CGG | + | chr3_1:63939506-63939525 | Msa0367920:intron | 40.0% |
TAGTTGTGTTGTAACTGCAG+AGG | - | chr3_1:63939694-63939713 | None:intergenic | 40.0% | |
CTCTTATTGAGAAGGTCTTG+TGG | - | chr3_1:63940146-63940165 | None:intergenic | 40.0% | |
! | GACCTAAGTTTGTTTCCTTG+AGG | + | chr3_1:63940173-63940192 | Msa0367920:intron | 40.0% |
ATCACCCATCTGTCTAAGAA+AGG | - | chr3_1:63940294-63940313 | None:intergenic | 40.0% | |
AAGTACGAAGCATATCCTCT+AGG | - | chr3_1:63941128-63941147 | None:intergenic | 40.0% | |
GTGTTTAGATGTTACCCTTG+GGG | + | chr3_1:63941227-63941246 | Msa0367920:intron | 40.0% | |
TGTTTAGATGTTACCCTTGG+GGG | + | chr3_1:63941228-63941247 | Msa0367920:intron | 40.0% | |
! | AAAAAGCACACAAAGGACGT+AGG | + | chr3_1:63941346-63941365 | Msa0367920:intron | 40.0% |
TTATTGTTGGGTACTTCCAC+TGG | + | chr3_1:63941480-63941499 | Msa0367920:intron | 40.0% | |
GCGTGACTAATTACATCACA+AGG | - | chr3_1:63941564-63941583 | None:intergenic | 40.0% | |
TTGTTTCGGTGAAGGATCTT+TGG | + | chr3_1:63941673-63941692 | Msa0367920:CDS | 40.0% | |
! | CGAGGACGAATTTTCTTAAG+GGG | + | chr3_1:63941809-63941828 | Msa0367920:intron | 40.0% |
! | GAGGACGAATTTTCTTAAGG+GGG | + | chr3_1:63941810-63941829 | Msa0367920:intron | 40.0% |
! | AGGACGAATTTTCTTAAGGG+GGG | + | chr3_1:63941811-63941830 | Msa0367920:intron | 40.0% |
TGGAATTGGCGGTTTGTAAA+AGG | - | chr3_1:63942062-63942081 | None:intergenic | 40.0% | |
!! | TGATTTGGTGATGGAATTGG+CGG | - | chr3_1:63942073-63942092 | None:intergenic | 40.0% |
TGGGTATTCTTCTCCTTCTT+TGG | - | chr3_1:63942184-63942203 | None:intergenic | 40.0% | |
! | GAATGATGGAATGGAAGGGA+AGG | - | chr3_1:63932608-63932627 | None:intergenic | 45.0% |
GAGAGAGAGGAAGAAGATAG+GGG | - | chr3_1:63932658-63932677 | None:intergenic | 45.0% | |
GAGAGAGAGAGGAAGAAGAT+AGG | - | chr3_1:63932660-63932679 | None:intergenic | 45.0% | |
CTAAAGAAGATGCCCTTGGA+AGG | + | chr3_1:63933185-63933204 | Msa0367920:exon | 45.0% | |
GCTCACACTGAACTATCTCT+TGG | + | chr3_1:63933365-63933384 | Msa0367920:CDS | 45.0% | |
! | ATTCCCCTTTTTACCAGCCA+TGG | + | chr3_1:63933655-63933674 | Msa0367920:CDS | 45.0% |
GTTCCATGGCTGGTAAAAAG+GGG | - | chr3_1:63933661-63933680 | None:intergenic | 45.0% | |
TCTCTTGAATGTTCCATGGC+TGG | - | chr3_1:63933671-63933690 | None:intergenic | 45.0% | |
ACGGAGTTGAATTAGGCATG+TGG | - | chr3_1:63933721-63933740 | None:intergenic | 45.0% | |
GAAGGAGACGGAGTTGAATT+AGG | - | chr3_1:63933728-63933747 | None:intergenic | 45.0% | |
GAAGATGACGAAGAAGGAGA+CGG | - | chr3_1:63933740-63933759 | None:intergenic | 45.0% | |
AGAGGTGAAGATGACGAAGA+AGG | - | chr3_1:63933746-63933765 | None:intergenic | 45.0% | |
AAACCTCCTGCAGCTATGTA+GGG | - | chr3_1:63933773-63933792 | None:intergenic | 45.0% | |
TAAACCTCCTGCAGCTATGT+AGG | - | chr3_1:63933774-63933793 | None:intergenic | 45.0% | |
ATTAAACCTTGTGGCTACGG+CGG | - | chr3_1:63933846-63933865 | None:intergenic | 45.0% | |
!! | TGATGATGATGGTGGTGCAA+TGG | - | chr3_1:63933896-63933915 | None:intergenic | 45.0% |
!! | GTGAGTGATGATGATGATGG+TGG | - | chr3_1:63933904-63933923 | None:intergenic | 45.0% |
GTACTTGTCCATCGCATTCT+TGG | - | chr3_1:63934019-63934038 | None:intergenic | 45.0% | |
GTTCATGCTGTTGAGCTTCT+TGG | + | chr3_1:63934055-63934074 | Msa0367920:CDS | 45.0% | |
ATCAGAGACTGTGTCATGTC+TGG | - | chr3_1:63934637-63934656 | None:intergenic | 45.0% | |
GAATTACCTGAAGAAGCTGC+AGG | - | chr3_1:63934962-63934981 | None:intergenic | 45.0% | |
! | GTTGGATTAGGCCTTTCAGA+TGG | + | chr3_1:63935316-63935335 | Msa0367920:intron | 45.0% |
TTAGGCCTTTCAGATGGATC+TGG | + | chr3_1:63935322-63935341 | Msa0367920:intron | 45.0% | |
GAGGATGATGTGCCACAAAT+TGG | + | chr3_1:63935346-63935365 | Msa0367920:CDS | 45.0% | |
GTGCCACAAATTGGAAGCAA+TGG | + | chr3_1:63935355-63935374 | Msa0367920:CDS | 45.0% | |
CCACCATTGCTTCCAATTTG+TGG | - | chr3_1:63935361-63935380 | None:intergenic | 45.0% | |
CCACAAATTGGAAGCAATGG+TGG | + | chr3_1:63935358-63935377 | Msa0367920:CDS | 45.0% | |
ACTCATCCACCAACACTCTA+TGG | + | chr3_1:63935443-63935462 | Msa0367920:CDS | 45.0% | |
ACCATGTGGTGAAATCCTTG+TGG | + | chr3_1:63936415-63936434 | Msa0367920:intron | 45.0% | |
ACCACAAGGATTTCACCACA+TGG | - | chr3_1:63936419-63936438 | None:intergenic | 45.0% | |
GATGGAAAATCACGACCACA+AGG | - | chr3_1:63936433-63936452 | None:intergenic | 45.0% | |
!! | GTAAACATTAGTGGTGGTGG+AGG | + | chr3_1:63936968-63936987 | Msa0367920:intron | 45.0% |
! | TTTGGACTTGTTTGTGGCCA+TGG | - | chr3_1:63937466-63937485 | None:intergenic | 45.0% |
! | CCGGTCACGATTGTGAATTT+TGG | + | chr3_1:63938042-63938061 | Msa0367920:intron | 45.0% |
!! | ACAAAGTTGGTATCAGAGCC+CGG | + | chr3_1:63938071-63938090 | Msa0367920:intron | 45.0% |
AGCTATTAGGACCAACAACC+GGG | - | chr3_1:63938092-63938111 | None:intergenic | 45.0% | |
CAGCTATTAGGACCAACAAC+CGG | - | chr3_1:63938093-63938112 | None:intergenic | 45.0% | |
! | TTTGCAAGTAAATGGTGCCG+CGG | - | chr3_1:63938158-63938177 | None:intergenic | 45.0% |
GATCCTAGTCAAAGAGGTTG+TGG | + | chr3_1:63938380-63938399 | Msa0367920:intron | 45.0% | |
TTAGTGTGGAGGTTCACAGA+GGG | + | chr3_1:63938451-63938470 | Msa0367920:intron | 45.0% | |
!! | AGGGAGGCGAATTTTGCTAT+TGG | + | chr3_1:63938470-63938489 | Msa0367920:intron | 45.0% |
GAGACATGACACTCCTAGAA+AGG | - | chr3_1:63938665-63938684 | None:intergenic | 45.0% | |
!! | AGGTGTTGTTTGGCAGTGTT+GGG | + | chr3_1:63938951-63938970 | Msa0367920:intron | 45.0% |
TTCTCACTAGTACGGAGTGT+TGG | + | chr3_1:63939171-63939190 | Msa0367920:intron | 45.0% | |
!! | GTACGGAGTGTTGGAACAAA+CGG | + | chr3_1:63939180-63939199 | Msa0367920:intron | 45.0% |
! | GTTGCCTAATCTGAAGTGTC+AGG | - | chr3_1:63939348-63939367 | None:intergenic | 45.0% |
TGGGCGGAATGCAAAATCAT+AGG | + | chr3_1:63939522-63939541 | Msa0367920:intron | 45.0% | |
CTAGCGAGAGTTGAGATACT+AGG | + | chr3_1:63939813-63939832 | Msa0367920:intron | 45.0% | |
TGATGGGAAGGGATGAATGA+GGG | + | chr3_1:63940920-63940939 | Msa0367920:intron | 45.0% | |
CTACAATACAAAGCCCCCAA+GGG | - | chr3_1:63941244-63941263 | None:intergenic | 45.0% | |
TGAACTGTTGAGAGAACCAG+TGG | - | chr3_1:63941499-63941518 | None:intergenic | 45.0% | |
GGTTCTCTCAACAGTTCATC+CGG | + | chr3_1:63941501-63941520 | Msa0367920:intron | 45.0% | |
TAGTCACGCAGATGTGCAAT+TGG | + | chr3_1:63941575-63941594 | Msa0367920:CDS | 45.0% | |
TCATACACCGAACATCCGAT+AGG | + | chr3_1:63941609-63941628 | Msa0367920:CDS | 45.0% | |
! | TCGGTGAAGGATCTTTGGAA+AGG | + | chr3_1:63941678-63941697 | Msa0367920:CDS | 45.0% |
TTCCGTAGTGGTTTCTTCGT+CGG | - | chr3_1:63941709-63941728 | None:intergenic | 45.0% | |
!! | CATGGGGTTTGATTTGGTGA+TGG | - | chr3_1:63942082-63942101 | None:intergenic | 45.0% |
TGGAGTTAGTGCTCCAAAGA+AGG | + | chr3_1:63942168-63942187 | Msa0367920:intron | 45.0% | |
TTCAGATGCTTCTTCAGGAG+TGG | + | chr3_1:63942420-63942439 | Msa0367920:CDS | 45.0% | |
!!! | ATTAAATACAATTTTTTTTT+TGG | - | chr3_1:63937599-63937618 | None:intergenic | 5.0% |
!!! | AAAAAAATTGTATTTAATTT+AGG | + | chr3_1:63937601-63937620 | Msa0367920:intron | 5.0% |
AGAGAGAGAGAGAGAGAGAG+AGG | - | chr3_1:63932669-63932688 | None:intergenic | 50.0% | |
AACCTCCTGCAGCTATGTAG+GGG | - | chr3_1:63933772-63933791 | None:intergenic | 50.0% | |
! | AAACTCAAGTGGCTCTACGG+CGG | + | chr3_1:63933811-63933830 | Msa0367920:CDS | 50.0% |
! | CACTCACACTATGGGAGTGT+TGG | + | chr3_1:63933917-63933936 | Msa0367920:CDS | 50.0% |
!! | CACTATGGGAGTGTTGGACT+TGG | + | chr3_1:63933923-63933942 | Msa0367920:CDS | 50.0% |
!! | TGAGAGCACCAAGAATGCGA+TGG | + | chr3_1:63934008-63934027 | Msa0367920:CDS | 50.0% |
CATGCTGTTGAGCTTCTTGG+TGG | + | chr3_1:63934058-63934077 | Msa0367920:CDS | 50.0% | |
GACAAACCTGCAGCTTCTTC+AGG | + | chr3_1:63934953-63934972 | Msa0367920:CDS | 50.0% | |
CCTCTCCAGATCCATCTGAA+AGG | - | chr3_1:63935330-63935349 | None:intergenic | 50.0% | |
CCTTTCAGATGGATCTGGAG+AGG | + | chr3_1:63935327-63935346 | Msa0367920:CDS | 50.0% | |
GGTTGGGCAGTAAACCCATA+AGG | - | chr3_1:63938356-63938375 | None:intergenic | 50.0% | |
GTTAGTGTGGAGGTTCACAG+AGG | + | chr3_1:63938450-63938469 | Msa0367920:intron | 50.0% | |
!! | GAGGTGTTGTTTGGCAGTGT+TGG | + | chr3_1:63938950-63938969 | Msa0367920:intron | 50.0% |
! | TTGGCAGTGTTGGGTTTCTG+AGG | + | chr3_1:63938960-63938979 | Msa0367920:intron | 50.0% |
!! | AATGGACTATGGCGGCATGT+TGG | - | chr3_1:63939785-63939804 | None:intergenic | 50.0% |
! | TGGATGTGGGTTGAGTGGTA+GGG | - | chr3_1:63940073-63940092 | None:intergenic | 50.0% |
! | ATGGATGTGGGTTGAGTGGT+AGG | - | chr3_1:63940074-63940093 | None:intergenic | 50.0% |
! | AGGTATGGATGTGGGTTGAG+TGG | - | chr3_1:63940078-63940097 | None:intergenic | 50.0% |
! | CAATATCAGGGAGACTCGGT+AGG | + | chr3_1:63940649-63940668 | Msa0367920:intron | 50.0% |
! | GTGATGGGAAGGGATGAATG+AGG | + | chr3_1:63940919-63940938 | Msa0367920:intron | 50.0% |
CCTACAATACAAAGCCCCCA+AGG | - | chr3_1:63941245-63941264 | None:intergenic | 50.0% | |
! | CCTTGGGGGCTTTGTATTGT+AGG | + | chr3_1:63941242-63941261 | Msa0367920:intron | 50.0% |
GTCCGACGAAGAAACCACTA+CGG | + | chr3_1:63941704-63941723 | Msa0367920:CDS | 50.0% | |
! | TACTTCTTCGGGTTCCGTAG+TGG | - | chr3_1:63941721-63941740 | None:intergenic | 50.0% |
AACAGAGAGAGTTACGGGGA+GGG | - | chr3_1:63942010-63942029 | None:intergenic | 50.0% | |
TGGGAACAGAGAGAGTTACG+GGG | - | chr3_1:63942014-63942033 | None:intergenic | 50.0% | |
GTGGGAACAGAGAGAGTTAC+GGG | - | chr3_1:63942015-63942034 | None:intergenic | 50.0% | |
GGTGGGAACAGAGAGAGTTA+CGG | - | chr3_1:63942016-63942035 | None:intergenic | 50.0% | |
GACGCTTCAGATGCTTCTTC+AGG | + | chr3_1:63942415-63942434 | Msa0367920:CDS | 50.0% | |
GCAGCTATGTAGGGGGAAAG+AGG | - | chr3_1:63933764-63933783 | None:intergenic | 55.0% | |
CTTTCCCCCTACATAGCTGC+AGG | + | chr3_1:63933764-63933783 | Msa0367920:CDS | 55.0% | |
ACCTCCTGCAGCTATGTAGG+GGG | - | chr3_1:63933771-63933790 | None:intergenic | 55.0% | |
TGGTGGAGGCTTACCATGCA+AGG | + | chr3_1:63936982-63937001 | Msa0367920:intron | 55.0% | |
TGGTATCAGAGCCCGGTTGT+TGG | + | chr3_1:63938078-63938097 | Msa0367920:intron | 55.0% | |
!! | CGGAGTGTTGGAACAAACGG+AGG | + | chr3_1:63939183-63939202 | Msa0367920:intron | 55.0% |
GACTATGGCGGCATGTTGGA+AGG | - | chr3_1:63939781-63939800 | None:intergenic | 55.0% | |
CGGGGAGGGAGTAAGAATGA+GGG | - | chr3_1:63941996-63942015 | None:intergenic | 55.0% | |
ACGGGGAGGGAGTAAGAATG+AGG | - | chr3_1:63941997-63942016 | None:intergenic | 55.0% | |
GAACAGAGAGAGTTACGGGG+AGG | - | chr3_1:63942011-63942030 | None:intergenic | 55.0% | |
TCCCCCTACATAGCTGCAGG+AGG | + | chr3_1:63933767-63933786 | Msa0367920:CDS | 60.0% | |
GTGTGGAGGTTCACAGAGGG+AGG | + | chr3_1:63938454-63938473 | Msa0367920:intron | 60.0% | |
ATCGAGCCGCCGTAGCCACA+AGG | + | chr3_1:63933837-63933856 | Msa0367920:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 63932560 | 63942459 | 63932560 | ID=Msa0367920;Name=Msa0367920 |
chr3_1 | mRNA | 63932560 | 63942459 | 63932560 | ID=Msa0367920-mRNA-1;Parent=Msa0367920;Name=Msa0367920-mRNA-1;_AED=0.10;_eAED=0.10;_QI=608|0.57|0.5|0.75|0.85|0.75|8|0|509 |
chr3_1 | exon | 63932560 | 63932682 | 63932560 | ID=Msa0367920-mRNA-1:exon:12717;Parent=Msa0367920-mRNA-1 |
chr3_1 | exon | 63932709 | 63934088 | 63932709 | ID=Msa0367920-mRNA-1:exon:12718;Parent=Msa0367920-mRNA-1 |
chr3_1 | exon | 63934397 | 63934473 | 63934397 | ID=Msa0367920-mRNA-1:exon:12719;Parent=Msa0367920-mRNA-1 |
chr3_1 | exon | 63934929 | 63934974 | 63934929 | ID=Msa0367920-mRNA-1:exon:12720;Parent=Msa0367920-mRNA-1 |
chr3_1 | exon | 63935326 | 63935479 | 63935326 | ID=Msa0367920-mRNA-1:exon:12721;Parent=Msa0367920-mRNA-1 |
chr3_1 | exon | 63937453 | 63937552 | 63937453 | ID=Msa0367920-mRNA-1:exon:12722;Parent=Msa0367920-mRNA-1 |
chr3_1 | exon | 63941549 | 63941751 | 63941549 | ID=Msa0367920-mRNA-1:exon:12723;Parent=Msa0367920-mRNA-1 |
chr3_1 | exon | 63942405 | 63942459 | 63942405 | ID=Msa0367920-mRNA-1:exon:12724;Parent=Msa0367920-mRNA-1 |
chr3_1 | five_prime_UTR | 63932560 | 63932682 | 63932560 | ID=Msa0367920-mRNA-1:five_prime_utr;Parent=Msa0367920-mRNA-1 |
chr3_1 | five_prime_UTR | 63932709 | 63933193 | 63932709 | ID=Msa0367920-mRNA-1:five_prime_utr;Parent=Msa0367920-mRNA-1 |
chr3_1 | CDS | 63933194 | 63934088 | 63933194 | ID=Msa0367920-mRNA-1:cds;Parent=Msa0367920-mRNA-1 |
chr3_1 | CDS | 63934397 | 63934473 | 63934397 | ID=Msa0367920-mRNA-1:cds;Parent=Msa0367920-mRNA-1 |
chr3_1 | CDS | 63934929 | 63934974 | 63934929 | ID=Msa0367920-mRNA-1:cds;Parent=Msa0367920-mRNA-1 |
chr3_1 | CDS | 63935326 | 63935479 | 63935326 | ID=Msa0367920-mRNA-1:cds;Parent=Msa0367920-mRNA-1 |
chr3_1 | CDS | 63937453 | 63937552 | 63937453 | ID=Msa0367920-mRNA-1:cds;Parent=Msa0367920-mRNA-1 |
chr3_1 | CDS | 63941549 | 63941751 | 63941549 | ID=Msa0367920-mRNA-1:cds;Parent=Msa0367920-mRNA-1 |
chr3_1 | CDS | 63942405 | 63942459 | 63942405 | ID=Msa0367920-mRNA-1:cds;Parent=Msa0367920-mRNA-1 |
Gene Sequence |
Protein sequence |