Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0368030 | XP_024626574.1 | 57.826 | 230 | 42 | 4 | 1 | 227 | 1 | 178 | 1.18e-68 | 225 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0368030 | A0A072TYR1 | 59.130 | 230 | 44 | 5 | 1 | 227 | 1 | 183 | 2.52e-68 | 230 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0368030 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0368030 | MtrunA17_Chr2g0287651 | 63.077 | 65 | 24 | 0 | 222 | 286 | 494 | 558 | 1.05e-19 | 90.1 |
| Msa0368030 | MtrunA17_Chr2g0287651 | 46.479 | 71 | 38 | 0 | 147 | 217 | 58 | 128 | 9.73e-18 | 84.3 |
| Msa0368030 | MtrunA17_Chr6g0479721 | 46.667 | 120 | 44 | 3 | 1 | 119 | 1 | 101 | 1.76e-11 | 60.8 |
| Msa0368030 | MtrunA17_Chr8g0389811 | 36.170 | 94 | 56 | 2 | 132 | 221 | 48 | 141 | 2.34e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 65 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAATGACTTTACGGATTT+TGG | 0.057115 | 3_1:-64089753 | Msa0368030:CDS |
| CATTAACTGCTGAAGGAATA+AGG | 0.236547 | 3_1:-64089290 | Msa0368030:CDS |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 3_1:-64089525 | Msa0368030:CDS |
| AAACAACAACAATGACTTTA+CGG | 0.325210 | 3_1:-64089760 | Msa0368030:CDS |
| CTGTTAGGAAGAGTGATATT+AGG | 0.340554 | 3_1:-64089197 | Msa0368030:CDS |
| GGTACACCGGAACATGATTA+CGG | 0.407134 | 3_1:-64089732 | Msa0368030:CDS |
| TGCTGAAGGAATAAGGGAAA+TGG | 0.412429 | 3_1:-64089283 | Msa0368030:CDS |
| CAGCACAGGGGATGAAAACT+TGG | 0.418956 | 3_1:+64087954 | None:intergenic |
| GCTGATAGATATGATGAAAC+TGG | 0.418978 | 3_1:-64089558 | Msa0368030:CDS |
| GATTATAGTGCTGGTGATAA+AGG | 0.421954 | 3_1:-64089501 | Msa0368030:CDS |
| AGAAGTGAAAGAAGAGATCA+TGG | 0.423624 | 3_1:-64087869 | Msa0368030:CDS |
| ATTAACTGCTGAAGGAATAA+GGG | 0.439851 | 3_1:-64089289 | Msa0368030:CDS |
| GAGAGAAGAAGCATTTATCA+AGG | 0.445750 | 3_1:-64089115 | Msa0368030:intron |
| GATATTAGGCGCAATGTTAA+CGG | 0.449906 | 3_1:-64089183 | Msa0368030:CDS |
| TGAGGCTGCTGAAATCTATA+CGG | 0.453437 | 3_1:-64087905 | Msa0368030:CDS |
| TGAGGCAGTATCTATGCAAT+AGG | 0.454261 | 3_1:-64089149 | Msa0368030:CDS |
| TATAAGTACGGTAAGTGTAA+AGG | 0.460291 | 3_1:-64089225 | Msa0368030:CDS |
| AAACATATCCGATGATTGTT+GGG | 0.461967 | 3_1:-64089683 | Msa0368030:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.464499 | 3_1:-64089325 | Msa0368030:CDS |
| GAAACATATCCGATGATTGT+TGG | 0.469215 | 3_1:-64089684 | Msa0368030:CDS |
| TGATTACGGTTCTACGGATG+TGG | 0.481654 | 3_1:-64089718 | Msa0368030:CDS |
| GAAGATGATAATGTAGTTGT+TGG | 0.483174 | 3_1:-64089336 | Msa0368030:CDS |
| TGTTCTGGTGATTATAGTGC+TGG | 0.489646 | 3_1:-64089510 | Msa0368030:CDS |
| CGCAGATGAGTTGTCAGCAC+AGG | 0.491267 | 3_1:+64087940 | None:intergenic |
| GCAGTATCTATGCAATAGGC+AGG | 0.492780 | 3_1:-64089145 | Msa0368030:CDS |
| GTAGAACCGTAATCATGTTC+CGG | 0.492886 | 3_1:+64089726 | None:intergenic |
| TACCATGACCTTCATTATCA+TGG | 0.501933 | 3_1:+64089382 | None:intergenic |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 3_1:-64089297 | Msa0368030:CDS |
| TGTGCAGTGAGTGGTCTTGT+GGG | 0.531632 | 3_1:+64087751 | Msa0368020:CDS |
| ATGTGCAGTGAGTGGTCTTG+TGG | 0.536239 | 3_1:+64087750 | Msa0368020:CDS |
| GGAACATGATTACGGTTCTA+CGG | 0.552732 | 3_1:-64089724 | Msa0368030:CDS |
| GTGAAAGAAGAGATCATGGA+AGG | 0.557230 | 3_1:-64087865 | Msa0368030:CDS |
| ACACCACTCCCAACAATCAT+CGG | 0.562059 | 3_1:+64089675 | None:intergenic |
| AGTGAAGGCCATGATAATGA+AGG | 0.569097 | 3_1:-64089390 | Msa0368030:CDS |
| GTAGATGATGATGACAATGA+TGG | 0.572452 | 3_1:-64089624 | Msa0368030:CDS |
| GCAGATGAGTTGTCAGCACA+GGG | 0.575960 | 3_1:+64087941 | None:intergenic |
| ATTTCACATCTCGCATGCAG+TGG | 0.576373 | 3_1:-64087802 | Msa0368030:CDS |
| GGTGATGAAGGTGAAGGTGA+TGG | 0.578030 | 3_1:-64089444 | Msa0368030:CDS |
| GATGAAAGTCAAGGTGATGA+AGG | 0.579998 | 3_1:-64089456 | Msa0368030:CDS |
| AGTATCTATGCAATAGGCAG+GGG | 0.585986 | 3_1:-64089143 | Msa0368030:CDS |
| GGTGATAAAGGTGAAGATGA+TGG | 0.589452 | 3_1:-64089489 | Msa0368030:CDS |
| CTTGCGCGATGTGCAGTGAG+TGG | 0.592425 | 3_1:+64087742 | Msa0368020:CDS |
| CAGTATCTATGCAATAGGCA+GGG | 0.594663 | 3_1:-64089144 | Msa0368030:CDS |
| GGCCATGATAATGAAGGTCA+TGG | 0.596256 | 3_1:-64089384 | Msa0368030:CDS |
| GGTGAAGGTGATGGAGGTGA+AGG | 0.600974 | 3_1:-64089435 | Msa0368030:CDS |
| GGAGACAATGAAAGTGATGA+TGG | 0.609236 | 3_1:-64089537 | Msa0368030:CDS |
| GATGAAGGTGAAGGTGATGG+AGG | 0.613749 | 3_1:-64089441 | Msa0368030:CDS |
| AATGAAGGTCATGGTAGTGA+AGG | 0.627821 | 3_1:-64089375 | Msa0368030:CDS |
| TCTGCGTTGTCTTGAACGTG+AGG | 0.635704 | 3_1:-64087923 | Msa0368030:CDS |
| ACTGCACATCGCGCAAGCAG+TGG | 0.641913 | 3_1:-64087736 | Msa0368030:CDS |
| TAGATGATGATGACAATGAT+GGG | 0.643158 | 3_1:-64089623 | Msa0368030:CDS |
| GGCAGATCCGACGTTTGCAT+AGG | 0.643266 | 3_1:-64087715 | None:intergenic |
| GATGACAATGATGGGAGTCA+TGG | 0.643643 | 3_1:-64089615 | Msa0368030:CDS |
| TATCCGATGATTGTTGGGAG+TGG | 0.653545 | 3_1:-64089678 | Msa0368030:CDS |
| TGATAATGTAGTTGTTGGTG+AGG | 0.656667 | 3_1:-64089331 | Msa0368030:CDS |
| AGGTGTTGCACTGAGTGTGA+AGG | 0.673574 | 3_1:-64087845 | Msa0368030:CDS |
| CAATGTACCTATGCAAACGT+CGG | 0.674204 | 3_1:+64087708 | Msa0368020:CDS |
| TTAACGGTGAGATTGTAATG+AGG | 0.680367 | 3_1:-64089167 | Msa0368030:CDS |
| AGTCAAGGTGATGAAGGTGA+AGG | 0.696692 | 3_1:-64089450 | Msa0368030:CDS |
| GACAATGAAAGTGATGATGG+TGG | 0.706532 | 3_1:-64089534 | Msa0368030:CDS |
| GTATCTATGCAATAGGCAGG+GGG | 0.707463 | 3_1:-64089142 | Msa0368030:CDS |
| CAATGTACGTATACAAACGT+CGG | 0.708230 | 3_1:+64087774 | Msa0368020:CDS |
| AGTGAATGTGATGAAAGTCA+AGG | 0.717258 | 3_1:-64089465 | Msa0368030:CDS |
| AGTGAAGATGATGAAAGTGA+AGG | 0.718504 | 3_1:-64089405 | Msa0368030:CDS |
| CAGATGAGTTGTCAGCACAG+GGG | 0.773409 | 3_1:+64087942 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TACAATTTTTATTATAAGTA+CGG | - | chr3_1:64088245-64088264 | Msa0368030:intron | 10.0% |
| !!! | TACAATTTTTATTATAAGTA+CGG | - | chr3_1:64088245-64088264 | Msa0368030:intron | 10.0% |
| !! | AAATCATAAAAAGTTATGTT+AGG | - | chr3_1:64089418-64089437 | Msa0368030:CDS | 15.0% |
| !! | AAATCATAAAAAGTTATGTT+AGG | - | chr3_1:64089418-64089437 | Msa0368030:CDS | 15.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr3_1:64088608-64088627 | Msa0368030:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr3_1:64088609-64088628 | Msa0368030:intron | 20.0% |
| !! | AAAAATGTGTGATGTTATTA+AGG | - | chr3_1:64088706-64088725 | Msa0368030:intron | 20.0% |
| !!! | AGATAAGATTATTTCTGTTT+TGG | - | chr3_1:64088867-64088886 | Msa0368030:intron | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr3_1:64089012-64089031 | Msa0368030:intron | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr3_1:64089013-64089032 | Msa0368030:intron | 20.0% |
| !! | AAAAAGTTATGTTAGGAAAA+AGG | - | chr3_1:64089425-64089444 | Msa0368030:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr3_1:64088608-64088627 | Msa0368030:intron | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr3_1:64088609-64088628 | Msa0368030:intron | 20.0% |
| !! | AAAAATGTGTGATGTTATTA+AGG | - | chr3_1:64088706-64088725 | Msa0368030:intron | 20.0% |
| !!! | AGATAAGATTATTTCTGTTT+TGG | - | chr3_1:64088867-64088886 | Msa0368030:intron | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr3_1:64089012-64089031 | Msa0368030:intron | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr3_1:64089013-64089032 | Msa0368030:intron | 20.0% |
| !! | AAAAAGTTATGTTAGGAAAA+AGG | - | chr3_1:64089425-64089444 | Msa0368030:CDS | 20.0% |
| ! | AAACAACAACAATGACTTTA+CGG | - | chr3_1:64087722-64087741 | Msa0368030:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr3_1:64088185-64088204 | Msa0368030:intron | 25.0% |
| !!! | TGTCAAGAATTCAACTTTTT+TGG | - | chr3_1:64089190-64089209 | Msa0368030:CDS | 25.0% |
| !!! | AAGAATTCAACTTTTTTGGA+TGG | - | chr3_1:64089194-64089213 | Msa0368030:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | - | chr3_1:64089460-64089479 | Msa0368030:CDS | 25.0% |
| ! | AAACAACAACAATGACTTTA+CGG | - | chr3_1:64087722-64087741 | Msa0368030:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr3_1:64088185-64088204 | Msa0368030:intron | 25.0% |
| !!! | TGTCAAGAATTCAACTTTTT+TGG | - | chr3_1:64089190-64089209 | Msa0368030:CDS | 25.0% |
| !!! | AAGAATTCAACTTTTTTGGA+TGG | - | chr3_1:64089194-64089213 | Msa0368030:CDS | 25.0% |
| !!! | ATTTCTGCATAATTTTGATG+AGG | - | chr3_1:64089460-64089479 | Msa0368030:CDS | 25.0% |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr3_1:64087729-64087748 | Msa0368030:CDS | 30.0% |
| AAACATATCCGATGATTGTT+GGG | - | chr3_1:64087799-64087818 | Msa0368030:CDS | 30.0% | |
| ! | TAGATGATGATGACAATGAT+GGG | - | chr3_1:64087859-64087878 | Msa0368030:CDS | 30.0% |
| ! | AATTTTACGAGGAATACTCA+AGG | - | chr3_1:64087891-64087910 | Msa0368030:CDS | 30.0% |
| ! | ATTTTACGAGGAATACTCAA+GGG | - | chr3_1:64087892-64087911 | Msa0368030:CDS | 30.0% |
| ! | GAAGATGATAATGTAGTTGT+TGG | - | chr3_1:64088146-64088165 | Msa0368030:intron | 30.0% |
| ATTAACTGCTGAAGGAATAA+GGG | - | chr3_1:64088193-64088212 | Msa0368030:intron | 30.0% | |
| TATAAGTACGGTAAGTGTAA+AGG | - | chr3_1:64088257-64088276 | Msa0368030:intron | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr3_1:64088376-64088395 | Msa0368030:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr3_1:64088465-64088484 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr3_1:64088479-64088498 | Msa0368030:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr3_1:64088480-64088499 | Msa0368030:intron | 30.0% |
| !! | CGGATATTTTTCGATAAACA+GGG | + | chr3_1:64088548-64088567 | None:intergenic | 30.0% |
| !! | TCGGATATTTTTCGATAAAC+AGG | + | chr3_1:64088549-64088568 | None:intergenic | 30.0% |
| AATCTGTGCTTTATCTACTT+CGG | + | chr3_1:64088568-64088587 | None:intergenic | 30.0% | |
| GTAGATAAAGCACAGATTAA+TGG | - | chr3_1:64088570-64088589 | Msa0368030:intron | 30.0% | |
| ATTAATGGTCTTCAGTTACA+CGG | - | chr3_1:64088585-64088604 | Msa0368030:intron | 30.0% | |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr3_1:64088617-64088636 | Msa0368030:intron | 30.0% |
| ATGTGTGATGTTATTAAGGA+TGG | - | chr3_1:64088710-64088729 | Msa0368030:intron | 30.0% | |
| GAATATTCACAAAAGGAATG+TGG | + | chr3_1:64088785-64088804 | None:intergenic | 30.0% | |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr3_1:64088819-64088838 | Msa0368030:intron | 30.0% |
| !!! | TTATTTCTGTTTTGGAGATG+TGG | - | chr3_1:64088875-64088894 | Msa0368030:intron | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr3_1:64088971-64088990 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr3_1:64088969-64088988 | Msa0368030:intron | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr3_1:64089041-64089060 | Msa0368030:intron | 30.0% |
| ! | AGCAATGTGCTCTAATTTTA+CGG | - | chr3_1:64089227-64089246 | Msa0368030:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr3_1:64089250-64089269 | Msa0368030:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr3_1:64089251-64089270 | Msa0368030:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr3_1:64089252-64089271 | Msa0368030:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr3_1:64089253-64089272 | Msa0368030:CDS | 30.0% |
| ! | TTCTTTGTTCTCATACGTTT+TGG | + | chr3_1:64089322-64089341 | None:intergenic | 30.0% |
| GTATGAGAACAAAGAATTGT+GGG | - | chr3_1:64089326-64089345 | Msa0368030:CDS | 30.0% | |
| ! | AACAATGACTTTACGGATTT+TGG | - | chr3_1:64087729-64087748 | Msa0368030:CDS | 30.0% |
| AAACATATCCGATGATTGTT+GGG | - | chr3_1:64087799-64087818 | Msa0368030:CDS | 30.0% | |
| ! | TAGATGATGATGACAATGAT+GGG | - | chr3_1:64087859-64087878 | Msa0368030:CDS | 30.0% |
| ! | AATTTTACGAGGAATACTCA+AGG | - | chr3_1:64087891-64087910 | Msa0368030:CDS | 30.0% |
| ! | ATTTTACGAGGAATACTCAA+GGG | - | chr3_1:64087892-64087911 | Msa0368030:CDS | 30.0% |
| ! | GAAGATGATAATGTAGTTGT+TGG | - | chr3_1:64088146-64088165 | Msa0368030:intron | 30.0% |
| ATTAACTGCTGAAGGAATAA+GGG | - | chr3_1:64088193-64088212 | Msa0368030:intron | 30.0% | |
| TATAAGTACGGTAAGTGTAA+AGG | - | chr3_1:64088257-64088276 | Msa0368030:intron | 30.0% | |
| AGCATTTATCAAGGTTAGAT+AGG | - | chr3_1:64088376-64088395 | Msa0368030:intron | 30.0% | |
| ! | ACAACATATCTACCCTTTTT+GGG | + | chr3_1:64088465-64088484 | None:intergenic | 30.0% |
| !!! | TGTTGTGTCTATTTTTGAAG+AGG | - | chr3_1:64088479-64088498 | Msa0368030:intron | 30.0% |
| !!! | GTTGTGTCTATTTTTGAAGA+GGG | - | chr3_1:64088480-64088499 | Msa0368030:intron | 30.0% |
| !! | CGGATATTTTTCGATAAACA+GGG | + | chr3_1:64088548-64088567 | None:intergenic | 30.0% |
| !! | TCGGATATTTTTCGATAAAC+AGG | + | chr3_1:64088549-64088568 | None:intergenic | 30.0% |
| AATCTGTGCTTTATCTACTT+CGG | + | chr3_1:64088568-64088587 | None:intergenic | 30.0% | |
| GTAGATAAAGCACAGATTAA+TGG | - | chr3_1:64088570-64088589 | Msa0368030:intron | 30.0% | |
| ATTAATGGTCTTCAGTTACA+CGG | - | chr3_1:64088585-64088604 | Msa0368030:intron | 30.0% | |
| ! | TTGTCATATAATGGGATACA+TGG | - | chr3_1:64088617-64088636 | Msa0368030:intron | 30.0% |
| ATGTGTGATGTTATTAAGGA+TGG | - | chr3_1:64088710-64088729 | Msa0368030:intron | 30.0% | |
| GAATATTCACAAAAGGAATG+TGG | + | chr3_1:64088785-64088804 | None:intergenic | 30.0% | |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr3_1:64088819-64088838 | Msa0368030:intron | 30.0% |
| !!! | TTATTTCTGTTTTGGAGATG+TGG | - | chr3_1:64088875-64088894 | Msa0368030:intron | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr3_1:64088971-64088990 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr3_1:64088969-64088988 | Msa0368030:intron | 30.0% | |
| ! | ACCAGTTTTCTAGATTGTAT+GGG | - | chr3_1:64089041-64089060 | Msa0368030:intron | 30.0% |
| ! | AGCAATGTGCTCTAATTTTA+CGG | - | chr3_1:64089227-64089246 | Msa0368030:CDS | 30.0% |
| ! | AGGATGAATTTGAAGAGTTT+TGG | - | chr3_1:64089250-64089269 | Msa0368030:CDS | 30.0% |
| ! | GGATGAATTTGAAGAGTTTT+GGG | - | chr3_1:64089251-64089270 | Msa0368030:CDS | 30.0% |
| ! | GATGAATTTGAAGAGTTTTG+GGG | - | chr3_1:64089252-64089271 | Msa0368030:CDS | 30.0% |
| !! | ATGAATTTGAAGAGTTTTGG+GGG | - | chr3_1:64089253-64089272 | Msa0368030:CDS | 30.0% |
| ! | TTCTTTGTTCTCATACGTTT+TGG | + | chr3_1:64089322-64089341 | None:intergenic | 30.0% |
| GTATGAGAACAAAGAATTGT+GGG | - | chr3_1:64089326-64089345 | Msa0368030:CDS | 30.0% | |
| GAAACATATCCGATGATTGT+TGG | - | chr3_1:64087798-64087817 | Msa0368030:CDS | 35.0% | |
| ! | GTAGATGATGATGACAATGA+TGG | - | chr3_1:64087858-64087877 | Msa0368030:CDS | 35.0% |
| GCTGATAGATATGATGAAAC+TGG | - | chr3_1:64087924-64087943 | Msa0368030:CDS | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr3_1:64087981-64088000 | Msa0368030:CDS | 35.0% |
| AGTGAATGTGATGAAAGTCA+AGG | - | chr3_1:64088017-64088036 | Msa0368030:intron | 35.0% | |
| AGTGAAGATGATGAAAGTGA+AGG | - | chr3_1:64088077-64088096 | Msa0368030:intron | 35.0% | |
| TACCATGACCTTCATTATCA+TGG | + | chr3_1:64088103-64088122 | None:intergenic | 35.0% | |
| ! | TGATAATGTAGTTGTTGGTG+AGG | - | chr3_1:64088151-64088170 | Msa0368030:intron | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr3_1:64088192-64088211 | Msa0368030:intron | 35.0% | |
| !!! | AGTGTAAAGGTTTTGCTGTT+AGG | - | chr3_1:64088270-64088289 | Msa0368030:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr3_1:64088285-64088304 | Msa0368030:intron | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr3_1:64088299-64088318 | Msa0368030:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr3_1:64088315-64088334 | Msa0368030:intron | 35.0% | |
| !! | GAGAGAAGAAGCATTTATCA+AGG | - | chr3_1:64088367-64088386 | Msa0368030:intron | 35.0% |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr3_1:64088466-64088485 | None:intergenic | 35.0% |
| TGTAAATGCACAACATTGGT+TGG | + | chr3_1:64088525-64088544 | None:intergenic | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr3_1:64088620-64088639 | Msa0368030:intron | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr3_1:64088792-64088811 | None:intergenic | 35.0% | |
| TTTCAAACGTCAATCATCAG+TGG | + | chr3_1:64088810-64088829 | None:intergenic | 35.0% | |
| !!! | AAATGTCTATTTTGGCGATG+TGG | - | chr3_1:64088827-64088846 | Msa0368030:intron | 35.0% |
| ATATAACTGTTTGTGAGTGG+TGG | + | chr3_1:64088968-64088987 | None:intergenic | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr3_1:64088980-64088999 | Msa0368030:intron | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr3_1:64089040-64089059 | Msa0368030:intron | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr3_1:64089045-64089064 | None:intergenic | 35.0% | |
| ! | AATGTGCTCTAATTTTACGG+AGG | - | chr3_1:64089230-64089249 | Msa0368030:CDS | 35.0% |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr3_1:64089254-64089273 | Msa0368030:CDS | 35.0% |
| CGTATGAGAACAAAGAATTG+TGG | - | chr3_1:64089325-64089344 | Msa0368030:CDS | 35.0% | |
| TACCTACGTGATGATTTCTT+TGG | - | chr3_1:64089357-64089376 | Msa0368030:CDS | 35.0% | |
| TACCAAAGAAATCATCACGT+AGG | + | chr3_1:64089362-64089381 | None:intergenic | 35.0% | |
| !! | AATTTTGATGAGGCAATGAG+AGG | - | chr3_1:64089470-64089489 | Msa0368030:CDS | 35.0% |
| AGAAGTGAAAGAAGAGATCA+TGG | - | chr3_1:64089613-64089632 | Msa0368030:CDS | 35.0% | |
| TGTGAAGGAAAAAGAAGTGA+AGG | - | chr3_1:64089652-64089671 | Msa0368030:CDS | 35.0% | |
| CAATGTACGTATACAAACGT+CGG | + | chr3_1:64089711-64089730 | None:intergenic | 35.0% | |
| GAAACATATCCGATGATTGT+TGG | - | chr3_1:64087798-64087817 | Msa0368030:CDS | 35.0% | |
| ! | GTAGATGATGATGACAATGA+TGG | - | chr3_1:64087858-64087877 | Msa0368030:CDS | 35.0% |
| GCTGATAGATATGATGAAAC+TGG | - | chr3_1:64087924-64087943 | Msa0368030:CDS | 35.0% | |
| !! | GATTATAGTGCTGGTGATAA+AGG | - | chr3_1:64087981-64088000 | Msa0368030:CDS | 35.0% |
| AGTGAATGTGATGAAAGTCA+AGG | - | chr3_1:64088017-64088036 | Msa0368030:intron | 35.0% | |
| AGTGAAGATGATGAAAGTGA+AGG | - | chr3_1:64088077-64088096 | Msa0368030:intron | 35.0% | |
| TACCATGACCTTCATTATCA+TGG | + | chr3_1:64088103-64088122 | None:intergenic | 35.0% | |
| ! | TGATAATGTAGTTGTTGGTG+AGG | - | chr3_1:64088151-64088170 | Msa0368030:intron | 35.0% |
| CATTAACTGCTGAAGGAATA+AGG | - | chr3_1:64088192-64088211 | Msa0368030:intron | 35.0% | |
| !!! | AGTGTAAAGGTTTTGCTGTT+AGG | - | chr3_1:64088270-64088289 | Msa0368030:intron | 35.0% |
| CTGTTAGGAAGAGTGATATT+AGG | - | chr3_1:64088285-64088304 | Msa0368030:intron | 35.0% | |
| GATATTAGGCGCAATGTTAA+CGG | - | chr3_1:64088299-64088318 | Msa0368030:intron | 35.0% | |
| TTAACGGTGAGATTGTAATG+AGG | - | chr3_1:64088315-64088334 | Msa0368030:intron | 35.0% | |
| !! | GAGAGAAGAAGCATTTATCA+AGG | - | chr3_1:64088367-64088386 | Msa0368030:intron | 35.0% |
| ! | CACAACATATCTACCCTTTT+TGG | + | chr3_1:64088466-64088485 | None:intergenic | 35.0% |
| TGTAAATGCACAACATTGGT+TGG | + | chr3_1:64088525-64088544 | None:intergenic | 35.0% | |
| ! | TCATATAATGGGATACATGG+TGG | - | chr3_1:64088620-64088639 | Msa0368030:intron | 35.0% |
| AGTGGCAGAATATTCACAAA+AGG | + | chr3_1:64088792-64088811 | None:intergenic | 35.0% | |
| TTTCAAACGTCAATCATCAG+TGG | + | chr3_1:64088810-64088829 | None:intergenic | 35.0% | |
| !!! | AAATGTCTATTTTGGCGATG+TGG | - | chr3_1:64088827-64088846 | Msa0368030:intron | 35.0% |
| ATATAACTGTTTGTGAGTGG+TGG | + | chr3_1:64088968-64088987 | None:intergenic | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr3_1:64088980-64088999 | Msa0368030:intron | 35.0% |
| ! | GACCAGTTTTCTAGATTGTA+TGG | - | chr3_1:64089040-64089059 | Msa0368030:intron | 35.0% |
| TCCCATACAATCTAGAAAAC+TGG | + | chr3_1:64089045-64089064 | None:intergenic | 35.0% | |
| ! | AATGTGCTCTAATTTTACGG+AGG | - | chr3_1:64089230-64089249 | Msa0368030:CDS | 35.0% |
| !!! | TGAATTTGAAGAGTTTTGGG+GGG | - | chr3_1:64089254-64089273 | Msa0368030:CDS | 35.0% |
| CGTATGAGAACAAAGAATTG+TGG | - | chr3_1:64089325-64089344 | Msa0368030:CDS | 35.0% | |
| TACCTACGTGATGATTTCTT+TGG | - | chr3_1:64089357-64089376 | Msa0368030:CDS | 35.0% | |
| TACCAAAGAAATCATCACGT+AGG | + | chr3_1:64089362-64089381 | None:intergenic | 35.0% | |
| !! | AATTTTGATGAGGCAATGAG+AGG | - | chr3_1:64089470-64089489 | Msa0368030:CDS | 35.0% |
| AGAAGTGAAAGAAGAGATCA+TGG | - | chr3_1:64089613-64089632 | Msa0368030:CDS | 35.0% | |
| TGTGAAGGAAAAAGAAGTGA+AGG | - | chr3_1:64089652-64089671 | Msa0368030:CDS | 35.0% | |
| CAATGTACGTATACAAACGT+CGG | + | chr3_1:64089711-64089730 | None:intergenic | 35.0% | |
| !! | CTTTACGGATTTTGGTACAC+CGG | - | chr3_1:64087737-64087756 | Msa0368030:CDS | 40.0% |
| GTAGAACCGTAATCATGTTC+CGG | + | chr3_1:64087759-64087778 | Msa0368020:CDS | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr3_1:64087758-64087777 | Msa0368030:CDS | 40.0% | |
| ! | GGAGTCATGGTAATTTTACG+AGG | - | chr3_1:64087880-64087899 | Msa0368030:CDS | 40.0% |
| GGAGACAATGAAAGTGATGA+TGG | - | chr3_1:64087945-64087964 | Msa0368030:CDS | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr3_1:64087948-64087967 | Msa0368030:CDS | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr3_1:64087972-64087991 | Msa0368030:CDS | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr3_1:64087993-64088012 | Msa0368030:CDS | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr3_1:64088026-64088045 | Msa0368030:intron | 40.0% | |
| ! | AGTGAAGGCCATGATAATGA+AGG | - | chr3_1:64088092-64088111 | Msa0368030:intron | 40.0% |
| ! | AATGAAGGTCATGGTAGTGA+AGG | - | chr3_1:64088107-64088126 | Msa0368030:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr3_1:64088157-64088176 | Msa0368030:intron | 40.0% |
| TGCTGAAGGAATAAGGGAAA+TGG | - | chr3_1:64088199-64088218 | Msa0368030:intron | 40.0% | |
| TGAGGCAGTATCTATGCAAT+AGG | - | chr3_1:64088333-64088352 | Msa0368030:intron | 40.0% | |
| CAGTATCTATGCAATAGGCA+GGG | - | chr3_1:64088338-64088357 | Msa0368030:intron | 40.0% | |
| AGTATCTATGCAATAGGCAG+GGG | - | chr3_1:64088339-64088358 | Msa0368030:intron | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr3_1:64088449-64088468 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr3_1:64088449-64088468 | Msa0368030:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr3_1:64088450-64088469 | Msa0368030:intron | 40.0% | |
| AGGGTGTAAATGCACAACAT+TGG | + | chr3_1:64088529-64088548 | None:intergenic | 40.0% | |
| TTCTTAGTGAATCCAACACC+AGG | + | chr3_1:64088662-64088681 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr3_1:64088774-64088793 | None:intergenic | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | - | chr3_1:64088923-64088942 | Msa0368030:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr3_1:64088935-64088954 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr3_1:64088936-64088955 | Msa0368030:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr3_1:64089077-64089096 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr3_1:64089074-64089093 | Msa0368030:intron | 40.0% | |
| TTCTATGAGAGAGGCGATAA+AGG | - | chr3_1:64089103-64089122 | Msa0368030:intron | 40.0% | |
| GCATTCGAACAAGAATGCTA+TGG | - | chr3_1:64089163-64089182 | Msa0368030:CDS | 40.0% | |
| ATTGCCTTGAGAACAATCCA+TGG | - | chr3_1:64089292-64089311 | Msa0368030:CDS | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | - | chr3_1:64089293-64089312 | Msa0368030:CDS | 40.0% | |
| ! | TAACCCATGGATTGTTCTCA+AGG | + | chr3_1:64089299-64089318 | None:intergenic | 40.0% |
| !! | TCATACGTTTTGGTAACCCA+TGG | + | chr3_1:64089312-64089331 | None:intergenic | 40.0% |
| TGAGGCTGCTGAAATCTATA+CGG | - | chr3_1:64089577-64089596 | Msa0368030:CDS | 40.0% | |
| GTGAAAGAAGAGATCATGGA+AGG | - | chr3_1:64089617-64089636 | Msa0368030:CDS | 40.0% | |
| !! | CTTTACGGATTTTGGTACAC+CGG | - | chr3_1:64087737-64087756 | Msa0368030:CDS | 40.0% |
| GTAGAACCGTAATCATGTTC+CGG | + | chr3_1:64087759-64087778 | Msa0368020:CDS | 40.0% | |
| GGAACATGATTACGGTTCTA+CGG | - | chr3_1:64087758-64087777 | Msa0368030:CDS | 40.0% | |
| ! | GGAGTCATGGTAATTTTACG+AGG | - | chr3_1:64087880-64087899 | Msa0368030:CDS | 40.0% |
| GGAGACAATGAAAGTGATGA+TGG | - | chr3_1:64087945-64087964 | Msa0368030:CDS | 40.0% | |
| !! | GACAATGAAAGTGATGATGG+TGG | - | chr3_1:64087948-64087967 | Msa0368030:CDS | 40.0% |
| TGTTCTGGTGATTATAGTGC+TGG | - | chr3_1:64087972-64087991 | Msa0368030:CDS | 40.0% | |
| GGTGATAAAGGTGAAGATGA+TGG | - | chr3_1:64087993-64088012 | Msa0368030:CDS | 40.0% | |
| GATGAAAGTCAAGGTGATGA+AGG | - | chr3_1:64088026-64088045 | Msa0368030:intron | 40.0% | |
| ! | AGTGAAGGCCATGATAATGA+AGG | - | chr3_1:64088092-64088111 | Msa0368030:intron | 40.0% |
| ! | AATGAAGGTCATGGTAGTGA+AGG | - | chr3_1:64088107-64088126 | Msa0368030:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr3_1:64088157-64088176 | Msa0368030:intron | 40.0% |
| TGCTGAAGGAATAAGGGAAA+TGG | - | chr3_1:64088199-64088218 | Msa0368030:intron | 40.0% | |
| TGAGGCAGTATCTATGCAAT+AGG | - | chr3_1:64088333-64088352 | Msa0368030:intron | 40.0% | |
| CAGTATCTATGCAATAGGCA+GGG | - | chr3_1:64088338-64088357 | Msa0368030:intron | 40.0% | |
| AGTATCTATGCAATAGGCAG+GGG | - | chr3_1:64088339-64088358 | Msa0368030:intron | 40.0% | |
| !! | TTTTGGGTCTGTAGTGAACA+CGG | + | chr3_1:64088449-64088468 | None:intergenic | 40.0% |
| TGTTCACTACAGACCCAAAA+AGG | - | chr3_1:64088449-64088468 | Msa0368030:intron | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr3_1:64088450-64088469 | Msa0368030:intron | 40.0% | |
| AGGGTGTAAATGCACAACAT+TGG | + | chr3_1:64088529-64088548 | None:intergenic | 40.0% | |
| TTCTTAGTGAATCCAACACC+AGG | + | chr3_1:64088662-64088681 | None:intergenic | 40.0% | |
| AAAGGAATGTGGATCAGTTG+AGG | + | chr3_1:64088774-64088793 | None:intergenic | 40.0% | |
| GAACAAATACCACTATCCGT+TGG | - | chr3_1:64088923-64088942 | Msa0368030:intron | 40.0% | |
| ACAAAATCACCAACGGATAG+TGG | + | chr3_1:64088935-64088954 | None:intergenic | 40.0% | |
| !!! | TATCCGTTGGTGATTTTGTC+TGG | - | chr3_1:64088936-64088955 | Msa0368030:intron | 40.0% |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr3_1:64089077-64089096 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr3_1:64089074-64089093 | Msa0368030:intron | 40.0% | |
| TTCTATGAGAGAGGCGATAA+AGG | - | chr3_1:64089103-64089122 | Msa0368030:intron | 40.0% | |
| GCATTCGAACAAGAATGCTA+TGG | - | chr3_1:64089163-64089182 | Msa0368030:CDS | 40.0% | |
| ATTGCCTTGAGAACAATCCA+TGG | - | chr3_1:64089292-64089311 | Msa0368030:CDS | 40.0% | |
| TTGCCTTGAGAACAATCCAT+GGG | - | chr3_1:64089293-64089312 | Msa0368030:CDS | 40.0% | |
| ! | TAACCCATGGATTGTTCTCA+AGG | + | chr3_1:64089299-64089318 | None:intergenic | 40.0% |
| !! | TCATACGTTTTGGTAACCCA+TGG | + | chr3_1:64089312-64089331 | None:intergenic | 40.0% |
| TGAGGCTGCTGAAATCTATA+CGG | - | chr3_1:64089577-64089596 | Msa0368030:CDS | 40.0% | |
| GTGAAAGAAGAGATCATGGA+AGG | - | chr3_1:64089617-64089636 | Msa0368030:CDS | 40.0% | |
| GGTACACCGGAACATGATTA+CGG | - | chr3_1:64087750-64087769 | Msa0368030:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr3_1:64087764-64087783 | Msa0368030:CDS | 45.0% | |
| TATCCGATGATTGTTGGGAG+TGG | - | chr3_1:64087804-64087823 | Msa0368030:CDS | 45.0% | |
| ACACCACTCCCAACAATCAT+CGG | + | chr3_1:64087810-64087829 | None:intergenic | 45.0% | |
| ! | GATGACAATGATGGGAGTCA+TGG | - | chr3_1:64087867-64087886 | Msa0368030:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr3_1:64087957-64087976 | Msa0368030:CDS | 45.0% |
| AGTCAAGGTGATGAAGGTGA+AGG | - | chr3_1:64088032-64088051 | Msa0368030:intron | 45.0% | |
| ! | GGCCATGATAATGAAGGTCA+TGG | - | chr3_1:64088098-64088117 | Msa0368030:intron | 45.0% |
| GCAGTATCTATGCAATAGGC+AGG | - | chr3_1:64088337-64088356 | Msa0368030:intron | 45.0% | |
| GTATCTATGCAATAGGCAGG+GGG | - | chr3_1:64088340-64088359 | Msa0368030:intron | 45.0% | |
| ! | TGCACAACATTGGTTGGAGT+AGG | + | chr3_1:64088519-64088538 | None:intergenic | 45.0% |
| ATACATGGTGGCTCAAAAGG+TGG | - | chr3_1:64088632-64088651 | Msa0368030:intron | 45.0% | |
| AAAGGTGGATATCCTGGTGT+TGG | - | chr3_1:64088647-64088666 | Msa0368030:intron | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr3_1:64088942-64088961 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr3_1:64088986-64089005 | Msa0368030:intron | 45.0% |
| GCAGTTGTAACAGATGGTGA+TGG | - | chr3_1:64089080-64089099 | Msa0368030:intron | 45.0% | |
| !! | TGGTGATGGTTCTATGAGAG+AGG | - | chr3_1:64089094-64089113 | Msa0368030:intron | 45.0% |
| ATTTCACATCTCGCATGCAG+TGG | - | chr3_1:64089680-64089699 | Msa0368030:CDS | 45.0% | |
| GGTACACCGGAACATGATTA+CGG | - | chr3_1:64087750-64087769 | Msa0368030:CDS | 45.0% | |
| TGATTACGGTTCTACGGATG+TGG | - | chr3_1:64087764-64087783 | Msa0368030:CDS | 45.0% | |
| TATCCGATGATTGTTGGGAG+TGG | - | chr3_1:64087804-64087823 | Msa0368030:CDS | 45.0% | |
| ACACCACTCCCAACAATCAT+CGG | + | chr3_1:64087810-64087829 | None:intergenic | 45.0% | |
| ! | GATGACAATGATGGGAGTCA+TGG | - | chr3_1:64087867-64087886 | Msa0368030:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr3_1:64087957-64087976 | Msa0368030:CDS | 45.0% |
| AGTCAAGGTGATGAAGGTGA+AGG | - | chr3_1:64088032-64088051 | Msa0368030:intron | 45.0% | |
| ! | GGCCATGATAATGAAGGTCA+TGG | - | chr3_1:64088098-64088117 | Msa0368030:intron | 45.0% |
| GCAGTATCTATGCAATAGGC+AGG | - | chr3_1:64088337-64088356 | Msa0368030:intron | 45.0% | |
| GTATCTATGCAATAGGCAGG+GGG | - | chr3_1:64088340-64088359 | Msa0368030:intron | 45.0% | |
| ! | TGCACAACATTGGTTGGAGT+AGG | + | chr3_1:64088519-64088538 | None:intergenic | 45.0% |
| ATACATGGTGGCTCAAAAGG+TGG | - | chr3_1:64088632-64088651 | Msa0368030:intron | 45.0% | |
| AAAGGTGGATATCCTGGTGT+TGG | - | chr3_1:64088647-64088666 | Msa0368030:intron | 45.0% | |
| CAGCCAGACAAAATCACCAA+CGG | + | chr3_1:64088942-64088961 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr3_1:64088986-64089005 | Msa0368030:intron | 45.0% |
| GCAGTTGTAACAGATGGTGA+TGG | - | chr3_1:64089080-64089099 | Msa0368030:intron | 45.0% | |
| !! | TGGTGATGGTTCTATGAGAG+AGG | - | chr3_1:64089094-64089113 | Msa0368030:intron | 45.0% |
| ATTTCACATCTCGCATGCAG+TGG | - | chr3_1:64089680-64089699 | Msa0368030:CDS | 45.0% | |
| GGTGATGAAGGTGAAGGTGA+TGG | - | chr3_1:64088038-64088057 | Msa0368030:intron | 50.0% | |
| ! | GATGAAGGTGAAGGTGATGG+AGG | - | chr3_1:64088041-64088060 | Msa0368030:intron | 50.0% |
| ACTTTGTGCGAGTGAGACGT+CGG | + | chr3_1:64088413-64088432 | None:intergenic | 50.0% | |
| ! | CATTGGTTGGAGTAGGCTCA+TGG | + | chr3_1:64088512-64088531 | None:intergenic | 50.0% |
| GGGATACATGGTGGCTCAAA+AGG | - | chr3_1:64088629-64088648 | Msa0368030:intron | 50.0% | |
| GGCTCAAAAGGTGGATATCC+TGG | - | chr3_1:64088641-64088660 | Msa0368030:intron | 50.0% | |
| CAAAGACGATGACGCGTACT+TGG | + | chr3_1:64089137-64089156 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr3_1:64089260-64089279 | Msa0368030:CDS | 50.0% |
| CAGCACAGGGGATGAAAACT+TGG | + | chr3_1:64089531-64089550 | None:intergenic | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr3_1:64089543-64089562 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr3_1:64089544-64089563 | None:intergenic | 50.0% | |
| TCTGCGTTGTCTTGAACGTG+AGG | - | chr3_1:64089559-64089578 | Msa0368030:CDS | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr3_1:64089637-64089656 | Msa0368030:CDS | 50.0% |
| !! | TGTGCAGTGAGTGGTCTTGT+GGG | + | chr3_1:64089734-64089753 | None:intergenic | 50.0% |
| ! | ATGTGCAGTGAGTGGTCTTG+TGG | + | chr3_1:64089735-64089754 | None:intergenic | 50.0% |
| GGTGATGAAGGTGAAGGTGA+TGG | - | chr3_1:64088038-64088057 | Msa0368030:intron | 50.0% | |
| ! | GATGAAGGTGAAGGTGATGG+AGG | - | chr3_1:64088041-64088060 | Msa0368030:intron | 50.0% |
| ACTTTGTGCGAGTGAGACGT+CGG | + | chr3_1:64088413-64088432 | None:intergenic | 50.0% | |
| ! | CATTGGTTGGAGTAGGCTCA+TGG | + | chr3_1:64088512-64088531 | None:intergenic | 50.0% |
| GGGATACATGGTGGCTCAAA+AGG | - | chr3_1:64088629-64088648 | Msa0368030:intron | 50.0% | |
| GGCTCAAAAGGTGGATATCC+TGG | - | chr3_1:64088641-64088660 | Msa0368030:intron | 50.0% | |
| CAAAGACGATGACGCGTACT+TGG | + | chr3_1:64089137-64089156 | None:intergenic | 50.0% | |
| !!! | TGAAGAGTTTTGGGGGGACT+TGG | - | chr3_1:64089260-64089279 | Msa0368030:CDS | 50.0% |
| CAGCACAGGGGATGAAAACT+TGG | + | chr3_1:64089531-64089550 | None:intergenic | 50.0% | |
| CAGATGAGTTGTCAGCACAG+GGG | + | chr3_1:64089543-64089562 | None:intergenic | 50.0% | |
| GCAGATGAGTTGTCAGCACA+GGG | + | chr3_1:64089544-64089563 | None:intergenic | 50.0% | |
| TCTGCGTTGTCTTGAACGTG+AGG | - | chr3_1:64089559-64089578 | Msa0368030:CDS | 50.0% | |
| ! | AGGTGTTGCACTGAGTGTGA+AGG | - | chr3_1:64089637-64089656 | Msa0368030:CDS | 50.0% |
| !! | TGTGCAGTGAGTGGTCTTGT+GGG | + | chr3_1:64089734-64089753 | None:intergenic | 50.0% |
| ! | ATGTGCAGTGAGTGGTCTTG+TGG | + | chr3_1:64089735-64089754 | None:intergenic | 50.0% |
| !! | GGTGAAGGTGATGGAGGTGA+AGG | - | chr3_1:64088047-64088066 | Msa0368030:intron | 55.0% |
| ! | CTCGCACAAAGTGTCCAGCT+AGG | - | chr3_1:64088421-64088440 | Msa0368030:intron | 55.0% |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr3_1:64088438-64088457 | None:intergenic | 55.0% | |
| CGCGTCATCGTCTTTGTGCT+TGG | - | chr3_1:64089141-64089160 | Msa0368030:CDS | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr3_1:64089265-64089284 | Msa0368030:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr3_1:64089266-64089285 | Msa0368030:CDS | 55.0% |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr3_1:64089545-64089564 | None:intergenic | 55.0% | |
| !! | GGTGAAGGTGATGGAGGTGA+AGG | - | chr3_1:64088047-64088066 | Msa0368030:intron | 55.0% |
| ! | CTCGCACAAAGTGTCCAGCT+AGG | - | chr3_1:64088421-64088440 | Msa0368030:intron | 55.0% |
| TAGTGAACACGGAGCCTAGC+TGG | + | chr3_1:64088438-64088457 | None:intergenic | 55.0% | |
| CGCGTCATCGTCTTTGTGCT+TGG | - | chr3_1:64089141-64089160 | Msa0368030:CDS | 55.0% | |
| !!! | AGTTTTGGGGGGACTTGGTG+AGG | - | chr3_1:64089265-64089284 | Msa0368030:CDS | 55.0% |
| !!! | GTTTTGGGGGGACTTGGTGA+GGG | - | chr3_1:64089266-64089285 | Msa0368030:CDS | 55.0% |
| CGCAGATGAGTTGTCAGCAC+AGG | + | chr3_1:64089545-64089564 | None:intergenic | 55.0% | |
| CTTGCGCGATGTGCAGTGAG+TGG | + | chr3_1:64089743-64089762 | None:intergenic | 60.0% | |
| ACTGCACATCGCGCAAGCAG+TGG | - | chr3_1:64089746-64089765 | Msa0368030:CDS | 60.0% | |
| CTTGCGCGATGTGCAGTGAG+TGG | + | chr3_1:64089743-64089762 | None:intergenic | 60.0% | |
| ACTGCACATCGCGCAAGCAG+TGG | - | chr3_1:64089746-64089765 | Msa0368030:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 64087717 | 64089787 | 64087717 | ID=Msa0368030;Name=Msa0368030 |
| chr3_1 | mRNA | 64087717 | 64089787 | 64087717 | ID=Msa0368030-mRNA-1;Parent=Msa0368030;Name=Msa0368030-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|1|0.5|2|0|326 |
| chr3_1 | exon | 64089116 | 64089787 | 64089116 | ID=Msa0368030-mRNA-1:exon:12817;Parent=Msa0368030-mRNA-1 |
| chr3_1 | exon | 64087717 | 64088022 | 64087717 | ID=Msa0368030-mRNA-1:exon:12816;Parent=Msa0368030-mRNA-1 |
| chr3_1 | CDS | 64089116 | 64089787 | 64089116 | ID=Msa0368030-mRNA-1:cds;Parent=Msa0368030-mRNA-1 |
| chr3_1 | CDS | 64087717 | 64088022 | 64087717 | ID=Msa0368030-mRNA-1:cds;Parent=Msa0368030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
