Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369020 | AES71097.2 | 87.586 | 145 | 8 | 1 | 1 | 135 | 1 | 145 | 4.37e-86 | 264 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369020 | sp|Q9FLR3|NAC79_ARATH | 65.493 | 142 | 35 | 2 | 2 | 130 | 11 | 151 | 3.67e-58 | 186 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369020 | G7JAN3 | 87.586 | 145 | 8 | 1 | 1 | 135 | 1 | 145 | 2.09e-86 | 264 |
Gene ID | Type | Classification |
---|---|---|
Msa0369020 | TF | NAC |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369020 | MtrunA17_Chr7g0217721 | 72.500 | 160 | 19 | 2 | 1 | 135 | 12 | 171 | 1.26e-76 | 231 |
Msa0369020 | MtrunA17_Chr7g0217711 | 73.377 | 154 | 22 | 2 | 1 | 135 | 12 | 165 | 6.66e-76 | 223 |
Msa0369020 | MtrunA17_Chr4g0060931 | 67.606 | 142 | 32 | 2 | 2 | 130 | 11 | 151 | 6.28e-61 | 191 |
Msa0369020 | MtrunA17_Chr6g0453451 | 65.753 | 146 | 36 | 2 | 3 | 135 | 15 | 159 | 1.51e-60 | 189 |
Msa0369020 | MtrunA17_Chr3g0091921 | 64.085 | 142 | 37 | 2 | 2 | 130 | 10 | 150 | 1.44e-56 | 178 |
Msa0369020 | MtrunA17_Chr6g0484441 | 67.480 | 123 | 27 | 1 | 12 | 121 | 9 | 131 | 6.50e-56 | 177 |
Msa0369020 | MtrunA17_Chr6g0461661 | 59.864 | 147 | 43 | 3 | 3 | 134 | 13 | 158 | 4.60e-55 | 176 |
Msa0369020 | MtrunA17_Chr2g0316971 | 65.926 | 135 | 30 | 3 | 12 | 131 | 27 | 160 | 3.52e-54 | 174 |
Msa0369020 | MtrunA17_Chr3g0113031 | 98.718 | 78 | 1 | 0 | 58 | 135 | 3 | 80 | 1.16e-52 | 167 |
Msa0369020 | MtrunA17_Chr7g0253011 | 59.589 | 146 | 41 | 4 | 2 | 130 | 11 | 155 | 3.65e-52 | 169 |
Msa0369020 | MtrunA17_Chr1g0147421 | 64.800 | 125 | 28 | 3 | 12 | 120 | 31 | 155 | 9.51e-51 | 164 |
Msa0369020 | MtrunA17_Chr3g0139331 | 63.710 | 124 | 30 | 3 | 12 | 120 | 15 | 138 | 1.70e-49 | 161 |
Msa0369020 | MtrunA17_Chr3g0113001 | 94.805 | 77 | 4 | 0 | 59 | 135 | 29 | 105 | 1.15e-48 | 157 |
Msa0369020 | MtrunA17_Chr3g0144271 | 58.955 | 134 | 39 | 3 | 12 | 129 | 27 | 160 | 8.39e-47 | 156 |
Msa0369020 | MtrunA17_Chr4g0017921 | 58.730 | 126 | 36 | 1 | 12 | 121 | 12 | 137 | 8.15e-44 | 146 |
Msa0369020 | MtrunA17_Chr4g0056541 | 53.125 | 128 | 44 | 1 | 12 | 123 | 11 | 138 | 5.62e-43 | 144 |
Msa0369020 | MtrunA17_Chr2g0312321 | 56.800 | 125 | 37 | 3 | 12 | 122 | 15 | 136 | 9.61e-43 | 142 |
Msa0369020 | MtrunA17_Chr6g0481091 | 54.400 | 125 | 42 | 1 | 12 | 121 | 10 | 134 | 9.69e-43 | 140 |
Msa0369020 | MtrunA17_Chr2g0309891 | 54.839 | 124 | 41 | 1 | 12 | 120 | 10 | 133 | 1.35e-42 | 143 |
Msa0369020 | MtrunA17_Chr5g0433781 | 53.435 | 131 | 46 | 1 | 6 | 121 | 4 | 134 | 2.72e-42 | 147 |
Msa0369020 | MtrunA17_Chr8g0372121 | 52.381 | 126 | 44 | 1 | 12 | 121 | 10 | 135 | 3.34e-42 | 141 |
Msa0369020 | MtrunA17_Chr4g0018391 | 52.344 | 128 | 45 | 1 | 12 | 123 | 11 | 138 | 4.07e-42 | 142 |
Msa0369020 | MtrunA17_Chr2g0309331 | 53.383 | 133 | 45 | 2 | 12 | 127 | 14 | 146 | 4.89e-42 | 142 |
Msa0369020 | MtrunA17_Chr8g0346001 | 50.725 | 138 | 52 | 1 | 12 | 133 | 19 | 156 | 5.07e-42 | 144 |
Msa0369020 | MtrunA17_Chr5g0398971 | 52.713 | 129 | 44 | 2 | 12 | 123 | 11 | 139 | 5.92e-42 | 141 |
Msa0369020 | MtrunA17_Chr5g0405211 | 50.781 | 128 | 47 | 1 | 12 | 123 | 12 | 139 | 8.50e-42 | 141 |
Msa0369020 | MtrunA17_Chr3g0109821 | 52.672 | 131 | 47 | 1 | 6 | 121 | 4 | 134 | 9.23e-42 | 146 |
Msa0369020 | MtrunA17_Chr3g0128111 | 54.472 | 123 | 41 | 1 | 12 | 119 | 46 | 168 | 4.07e-41 | 137 |
Msa0369020 | MtrunA17_Chr7g0214071 | 51.908 | 131 | 51 | 2 | 2 | 120 | 9 | 139 | 8.02e-41 | 136 |
Msa0369020 | MtrunA17_Chr3g0128151 | 56.911 | 123 | 38 | 1 | 12 | 119 | 26 | 148 | 1.23e-40 | 142 |
Msa0369020 | MtrunA17_Chr8g0359921 | 52.239 | 134 | 50 | 2 | 12 | 132 | 18 | 150 | 1.66e-40 | 137 |
Msa0369020 | MtrunA17_Chr1g0183741 | 52.800 | 125 | 44 | 3 | 12 | 121 | 14 | 138 | 6.21e-40 | 134 |
Msa0369020 | MtrunA17_Chr1g0200561 | 48.201 | 139 | 48 | 2 | 12 | 134 | 23 | 153 | 7.32e-40 | 136 |
Msa0369020 | MtrunA17_Chr5g0428991 | 55.285 | 123 | 40 | 1 | 12 | 119 | 29 | 151 | 7.66e-40 | 140 |
Msa0369020 | MtrunA17_Chr5g0417791 | 51.908 | 131 | 50 | 1 | 6 | 123 | 1 | 131 | 1.73e-39 | 133 |
Msa0369020 | MtrunA17_Chr4g0042561 | 52.308 | 130 | 49 | 1 | 7 | 123 | 8 | 137 | 2.36e-39 | 133 |
Msa0369020 | MtrunA17_Chr3g0124761 | 49.612 | 129 | 51 | 2 | 5 | 120 | 4 | 131 | 2.95e-39 | 133 |
Msa0369020 | MtrunA17_Chr2g0318081 | 53.279 | 122 | 44 | 1 | 12 | 120 | 20 | 141 | 8.34e-39 | 134 |
Msa0369020 | MtrunA17_Chr3g0130731 | 51.163 | 129 | 49 | 2 | 5 | 120 | 4 | 131 | 1.11e-38 | 132 |
Msa0369020 | MtrunA17_Chr7g0263931 | 47.887 | 142 | 59 | 2 | 5 | 131 | 8 | 149 | 2.34e-38 | 132 |
Msa0369020 | MtrunA17_Chr7g0261411 | 52.000 | 125 | 45 | 3 | 12 | 121 | 14 | 138 | 3.04e-38 | 130 |
Msa0369020 | MtrunA17_Chr4g0047841 | 49.624 | 133 | 48 | 3 | 12 | 129 | 19 | 147 | 4.79e-38 | 131 |
Msa0369020 | MtrunA17_Chr2g0318101 | 51.181 | 127 | 47 | 2 | 12 | 123 | 19 | 145 | 9.10e-38 | 130 |
Msa0369020 | MtrunA17_Chr8g0384721 | 50.781 | 128 | 49 | 2 | 6 | 120 | 5 | 131 | 1.05e-37 | 129 |
Msa0369020 | MtrunA17_Chr7g0252971 | 50.000 | 134 | 45 | 2 | 12 | 123 | 12 | 145 | 5.57e-37 | 128 |
Msa0369020 | MtrunA17_Chr5g0400461 | 49.618 | 131 | 44 | 2 | 12 | 120 | 10 | 140 | 1.81e-36 | 127 |
Msa0369020 | MtrunA17_Chr3g0113041 | 92.982 | 57 | 4 | 0 | 1 | 57 | 12 | 68 | 2.23e-35 | 117 |
Msa0369020 | MtrunA17_Chr4g0054791 | 48.819 | 127 | 47 | 2 | 12 | 120 | 10 | 136 | 2.31e-35 | 124 |
Msa0369020 | MtrunA17_Chr2g0326361 | 47.101 | 138 | 58 | 2 | 8 | 130 | 14 | 151 | 5.14e-35 | 123 |
Msa0369020 | MtrunA17_Chr3g0130101 | 44.138 | 145 | 65 | 2 | 1 | 130 | 1 | 144 | 5.88e-35 | 124 |
Msa0369020 | MtrunA17_Chr8g0364791 | 44.776 | 134 | 59 | 1 | 12 | 130 | 10 | 143 | 2.23e-34 | 123 |
Msa0369020 | MtrunA17_Chr1g0201021 | 47.287 | 129 | 53 | 1 | 12 | 125 | 23 | 151 | 3.27e-34 | 124 |
Msa0369020 | MtrunA17_Chr1g0197351 | 51.639 | 122 | 44 | 1 | 12 | 118 | 46 | 167 | 5.24e-34 | 123 |
Msa0369020 | MtrunA17_Chr1g0197361 | 47.727 | 132 | 53 | 2 | 12 | 127 | 12 | 143 | 5.27e-34 | 124 |
Msa0369020 | MtrunA17_Chr2g0311661 | 42.953 | 149 | 66 | 4 | 1 | 131 | 15 | 162 | 1.97e-33 | 118 |
Msa0369020 | MtrunA17_Chr3g0113011 | 83.607 | 61 | 10 | 0 | 1 | 61 | 12 | 72 | 3.98e-33 | 111 |
Msa0369020 | MtrunA17_Chr2g0311651 | 44.928 | 138 | 58 | 3 | 12 | 131 | 26 | 163 | 5.28e-33 | 117 |
Msa0369020 | MtrunA17_Chr3g0092671 | 48.031 | 127 | 46 | 3 | 12 | 120 | 9 | 133 | 1.11e-32 | 120 |
Msa0369020 | MtrunA17_Chr5g0417001 | 49.600 | 125 | 46 | 3 | 12 | 120 | 18 | 141 | 1.38e-32 | 118 |
Msa0369020 | MtrunA17_Chr8g0361731 | 45.522 | 134 | 57 | 3 | 4 | 122 | 11 | 143 | 2.49e-32 | 117 |
Msa0369020 | MtrunA17_Chr8g0384201 | 43.511 | 131 | 59 | 1 | 12 | 127 | 10 | 140 | 2.73e-32 | 118 |
Msa0369020 | MtrunA17_Chr6g0453131 | 47.154 | 123 | 51 | 2 | 12 | 120 | 19 | 141 | 8.04e-32 | 116 |
Msa0369020 | MtrunA17_Chr8g0385991 | 45.902 | 122 | 53 | 2 | 12 | 120 | 18 | 139 | 1.91e-31 | 111 |
Msa0369020 | MtrunA17_Chr2g0321741 | 48.113 | 106 | 41 | 1 | 27 | 118 | 11 | 116 | 2.12e-30 | 111 |
Msa0369020 | MtrunA17_Chr4g0076731 | 46.341 | 123 | 52 | 2 | 12 | 120 | 58 | 180 | 4.10e-30 | 112 |
Msa0369020 | MtrunA17_Chr8g0345691 | 49.600 | 125 | 44 | 5 | 12 | 118 | 16 | 139 | 1.98e-29 | 110 |
Msa0369020 | MtrunA17_Chr8g0345671 | 50.400 | 125 | 43 | 5 | 12 | 118 | 15 | 138 | 1.21e-28 | 107 |
Msa0369020 | MtrunA17_Chr5g0442771 | 44.000 | 125 | 54 | 2 | 12 | 120 | 22 | 146 | 1.56e-28 | 105 |
Msa0369020 | MtrunA17_Chr3g0131911 | 44.355 | 124 | 54 | 2 | 12 | 120 | 18 | 141 | 3.34e-28 | 103 |
Msa0369020 | MtrunA17_Chr4g0038751 | 40.714 | 140 | 66 | 3 | 1 | 124 | 9 | 147 | 1.20e-26 | 100 |
Msa0369020 | MtrunA17_Chr4g0050701 | 43.966 | 116 | 58 | 3 | 12 | 120 | 15 | 130 | 2.03e-26 | 97.8 |
Msa0369020 | MtrunA17_Chr2g0321631 | 42.969 | 128 | 53 | 4 | 12 | 119 | 8 | 135 | 4.04e-26 | 98.6 |
Msa0369020 | MtrunA17_Chr4g0026141 | 43.182 | 132 | 54 | 6 | 8 | 119 | 5 | 135 | 2.56e-25 | 96.7 |
Msa0369020 | MtrunA17_Chr8g0345711 | 44.800 | 125 | 50 | 5 | 12 | 118 | 16 | 139 | 3.44e-24 | 91.7 |
Msa0369020 | MtrunA17_Chr8g0345721 | 38.312 | 154 | 47 | 5 | 12 | 118 | 39 | 191 | 4.45e-23 | 89.7 |
Msa0369020 | MtrunA17_Chr8g0345731 | 41.732 | 127 | 54 | 4 | 12 | 118 | 28 | 154 | 3.41e-22 | 86.3 |
Msa0369020 | MtrunA17_Chr8g0345701 | 42.446 | 139 | 45 | 6 | 12 | 118 | 11 | 146 | 7.84e-22 | 85.5 |
Msa0369020 | MtrunA17_Chr7g0243371 | 54.545 | 66 | 28 | 1 | 60 | 123 | 29 | 94 | 1.11e-20 | 80.9 |
Msa0369020 | MtrunA17_Chr8g0345741 | 42.373 | 118 | 49 | 5 | 19 | 118 | 2 | 118 | 1.37e-19 | 79.3 |
Msa0369020 | MtrunA17_Chr7g0266701 | 38.281 | 128 | 59 | 3 | 12 | 119 | 8 | 135 | 1.90e-19 | 81.3 |
Msa0369020 | MtrunA17_Chr8g0384351 | 36.585 | 123 | 65 | 4 | 6 | 123 | 8 | 122 | 3.63e-15 | 68.6 |
Msa0369020 | MtrunA17_Chr3g0130321 | 33.571 | 140 | 84 | 4 | 4 | 134 | 3 | 142 | 1.21e-14 | 67.4 |
Msa0369020 | MtrunA17_Chr7g0251661 | 34.091 | 132 | 72 | 5 | 1 | 118 | 3 | 133 | 1.33e-14 | 66.2 |
Msa0369020 | MtrunA17_Chr7g0251651 | 33.058 | 121 | 66 | 4 | 12 | 118 | 22 | 141 | 1.80e-11 | 58.9 |
Msa0369020 | MtrunA17_Chr4g0040541 | 29.927 | 137 | 67 | 4 | 13 | 120 | 53 | 189 | 7.07e-11 | 58.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0369020 | AT5G07680.1 | 65.493 | 142 | 35 | 2 | 2 | 130 | 11 | 151 | 3.73e-59 | 186 |
Msa0369020 | AT5G61430.1 | 66.197 | 142 | 34 | 3 | 2 | 130 | 10 | 150 | 4.75e-59 | 186 |
Msa0369020 | AT3G29035.1 | 67.910 | 134 | 30 | 1 | 2 | 122 | 18 | 151 | 9.03e-59 | 184 |
Msa0369020 | AT5G07680.2 | 69.697 | 132 | 26 | 2 | 12 | 130 | 7 | 137 | 4.37e-58 | 182 |
Msa0369020 | AT5G39610.1 | 64.286 | 140 | 37 | 1 | 2 | 128 | 14 | 153 | 1.95e-56 | 177 |
Msa0369020 | AT5G53950.1 | 67.407 | 135 | 28 | 3 | 12 | 131 | 21 | 154 | 2.54e-56 | 180 |
Msa0369020 | AT3G18400.1 | 65.323 | 124 | 30 | 1 | 12 | 122 | 9 | 132 | 3.12e-55 | 175 |
Msa0369020 | AT5G18270.2 | 64.662 | 133 | 33 | 2 | 4 | 122 | 17 | 149 | 7.55e-55 | 175 |
Msa0369020 | AT5G18270.1 | 63.910 | 133 | 34 | 2 | 4 | 122 | 17 | 149 | 2.88e-54 | 173 |
Msa0369020 | AT3G04060.1 | 60.839 | 143 | 41 | 3 | 2 | 130 | 14 | 155 | 8.72e-53 | 169 |
Msa0369020 | AT3G15170.1 | 61.765 | 136 | 36 | 3 | 12 | 132 | 24 | 158 | 1.94e-50 | 163 |
Msa0369020 | AT2G24430.2 | 62.500 | 128 | 33 | 2 | 12 | 124 | 20 | 147 | 4.85e-50 | 162 |
Msa0369020 | AT2G24430.1 | 62.500 | 128 | 33 | 2 | 12 | 124 | 20 | 147 | 4.85e-50 | 162 |
Msa0369020 | AT1G76420.1 | 59.848 | 132 | 38 | 2 | 12 | 128 | 26 | 157 | 3.36e-48 | 157 |
Msa0369020 | AT3G12977.1 | 50.394 | 127 | 50 | 1 | 12 | 125 | 22 | 148 | 1.77e-43 | 144 |
Msa0369020 | AT4G10350.1 | 53.237 | 139 | 49 | 1 | 12 | 134 | 13 | 151 | 4.09e-43 | 145 |
Msa0369020 | AT1G65910.1 | 54.400 | 125 | 42 | 1 | 12 | 121 | 10 | 134 | 1.46e-42 | 148 |
Msa0369020 | AT2G46770.1 | 46.939 | 147 | 62 | 1 | 3 | 133 | 11 | 157 | 1.84e-42 | 144 |
Msa0369020 | AT3G17730.1 | 53.600 | 125 | 43 | 1 | 12 | 121 | 10 | 134 | 2.23e-42 | 140 |
Msa0369020 | AT1G56010.2 | 51.587 | 126 | 47 | 2 | 12 | 123 | 23 | 148 | 2.31e-42 | 142 |
Msa0369020 | AT1G33280.1 | 54.762 | 126 | 41 | 1 | 12 | 121 | 12 | 137 | 2.97e-42 | 142 |
Msa0369020 | AT1G33060.1 | 56.911 | 123 | 38 | 1 | 12 | 119 | 28 | 150 | 4.06e-42 | 147 |
Msa0369020 | AT1G33060.2 | 56.911 | 123 | 38 | 1 | 12 | 119 | 28 | 150 | 4.21e-42 | 147 |
Msa0369020 | AT1G12260.2 | 52.344 | 128 | 45 | 1 | 12 | 123 | 11 | 138 | 8.62e-42 | 141 |
Msa0369020 | AT1G12260.1 | 53.175 | 126 | 43 | 1 | 12 | 121 | 11 | 136 | 1.51e-41 | 142 |
Msa0369020 | AT1G71930.2 | 48.092 | 131 | 52 | 1 | 12 | 126 | 13 | 143 | 1.77e-41 | 140 |
Msa0369020 | AT1G71930.1 | 48.092 | 131 | 52 | 1 | 12 | 126 | 13 | 143 | 1.77e-41 | 140 |
Msa0369020 | AT4G36160.2 | 51.562 | 128 | 46 | 1 | 12 | 123 | 18 | 145 | 1.79e-41 | 141 |
Msa0369020 | AT4G36160.1 | 51.562 | 128 | 46 | 1 | 12 | 123 | 14 | 141 | 1.80e-41 | 141 |
Msa0369020 | AT4G36160.3 | 51.562 | 128 | 46 | 1 | 12 | 123 | 14 | 141 | 1.80e-41 | 141 |
Msa0369020 | AT3G03200.1 | 51.724 | 145 | 52 | 2 | 6 | 135 | 4 | 145 | 1.86e-41 | 143 |
Msa0369020 | AT5G17260.1 | 53.237 | 139 | 47 | 2 | 12 | 135 | 10 | 145 | 2.98e-41 | 142 |
Msa0369020 | AT4G35580.1 | 55.285 | 123 | 40 | 1 | 12 | 119 | 13 | 135 | 4.91e-41 | 142 |
Msa0369020 | AT4G35580.3 | 55.285 | 123 | 40 | 1 | 12 | 119 | 13 | 135 | 5.51e-41 | 143 |
Msa0369020 | AT4G35580.2 | 55.285 | 123 | 40 | 1 | 12 | 119 | 13 | 135 | 5.86e-41 | 142 |
Msa0369020 | AT2G18060.3 | 50.000 | 128 | 48 | 1 | 12 | 123 | 13 | 140 | 1.12e-40 | 139 |
Msa0369020 | AT2G18060.1 | 50.000 | 128 | 48 | 1 | 12 | 123 | 13 | 140 | 1.12e-40 | 139 |
Msa0369020 | AT1G62700.1 | 53.175 | 126 | 43 | 1 | 12 | 121 | 11 | 136 | 1.48e-40 | 139 |
Msa0369020 | AT1G62700.2 | 53.175 | 126 | 43 | 1 | 12 | 121 | 11 | 136 | 1.48e-40 | 139 |
Msa0369020 | AT3G10500.1 | 51.938 | 129 | 47 | 1 | 12 | 125 | 13 | 141 | 8.01e-40 | 140 |
Msa0369020 | AT5G13180.1 | 47.727 | 132 | 57 | 2 | 1 | 120 | 7 | 138 | 8.96e-40 | 134 |
Msa0369020 | AT5G04410.1 | 52.713 | 129 | 46 | 1 | 12 | 125 | 13 | 141 | 1.20e-39 | 139 |
Msa0369020 | AT3G10490.1 | 54.839 | 124 | 41 | 1 | 12 | 120 | 31 | 154 | 1.45e-39 | 133 |
Msa0369020 | AT2G33480.2 | 53.782 | 119 | 45 | 1 | 12 | 120 | 19 | 137 | 1.61e-39 | 134 |
Msa0369020 | AT2G33480.1 | 53.782 | 119 | 45 | 1 | 12 | 120 | 19 | 137 | 1.81e-39 | 133 |
Msa0369020 | AT1G32770.1 | 50.382 | 131 | 49 | 1 | 12 | 126 | 20 | 150 | 2.11e-39 | 135 |
Msa0369020 | AT1G01720.1 | 49.618 | 131 | 52 | 2 | 3 | 120 | 2 | 131 | 2.28e-39 | 134 |
Msa0369020 | AT5G62380.2 | 50.000 | 126 | 47 | 1 | 12 | 121 | 11 | 136 | 2.33e-39 | 135 |
Msa0369020 | AT5G62380.1 | 50.000 | 126 | 47 | 1 | 12 | 121 | 11 | 136 | 2.33e-39 | 135 |
Msa0369020 | AT3G61910.1 | 48.462 | 130 | 51 | 1 | 12 | 125 | 15 | 144 | 2.48e-39 | 135 |
Msa0369020 | AT5G66300.1 | 50.407 | 123 | 45 | 1 | 12 | 118 | 16 | 138 | 2.87e-39 | 134 |
Msa0369020 | AT4G27410.2 | 52.459 | 122 | 45 | 1 | 12 | 120 | 18 | 139 | 6.00e-39 | 133 |
Msa0369020 | AT1G54330.1 | 55.645 | 124 | 40 | 1 | 12 | 120 | 10 | 133 | 6.16e-39 | 133 |
Msa0369020 | AT2G27300.1 | 50.400 | 125 | 48 | 1 | 12 | 122 | 18 | 142 | 8.11e-39 | 133 |
Msa0369020 | AT1G61110.1 | 51.938 | 129 | 48 | 2 | 12 | 126 | 20 | 148 | 9.56e-39 | 133 |
Msa0369020 | AT3G10480.1 | 54.839 | 124 | 41 | 1 | 12 | 120 | 31 | 154 | 1.14e-38 | 135 |
Msa0369020 | AT3G15500.1 | 53.279 | 122 | 44 | 1 | 12 | 120 | 18 | 139 | 1.21e-38 | 132 |
Msa0369020 | AT3G10480.2 | 54.839 | 124 | 41 | 1 | 12 | 120 | 31 | 154 | 1.22e-38 | 135 |
Msa0369020 | AT3G49530.1 | 50.000 | 134 | 51 | 2 | 12 | 129 | 17 | 150 | 2.05e-38 | 135 |
Msa0369020 | AT3G49530.2 | 50.000 | 134 | 51 | 2 | 12 | 129 | 17 | 150 | 2.12e-38 | 134 |
Msa0369020 | AT1G52890.1 | 53.279 | 122 | 44 | 1 | 12 | 120 | 18 | 139 | 4.05e-38 | 131 |
Msa0369020 | AT3G10490.2 | 54.839 | 124 | 41 | 1 | 12 | 120 | 31 | 154 | 5.77e-38 | 134 |
Msa0369020 | AT3G04070.2 | 50.360 | 139 | 50 | 3 | 12 | 132 | 14 | 151 | 1.07e-37 | 130 |
Msa0369020 | AT1G79580.3 | 52.756 | 127 | 43 | 2 | 12 | 121 | 21 | 147 | 1.19e-37 | 131 |
Msa0369020 | AT1G79580.5 | 52.756 | 127 | 43 | 2 | 12 | 121 | 21 | 147 | 1.19e-37 | 131 |
Msa0369020 | AT1G79580.4 | 52.756 | 127 | 43 | 2 | 12 | 121 | 21 | 147 | 1.19e-37 | 131 |
Msa0369020 | AT1G79580.2 | 52.756 | 127 | 43 | 2 | 12 | 121 | 21 | 147 | 1.19e-37 | 131 |
Msa0369020 | AT1G79580.1 | 52.756 | 127 | 43 | 2 | 12 | 121 | 21 | 147 | 1.19e-37 | 131 |
Msa0369020 | AT3G04070.1 | 50.360 | 139 | 50 | 3 | 12 | 132 | 14 | 151 | 1.58e-37 | 130 |
Msa0369020 | AT5G08790.1 | 53.279 | 122 | 43 | 2 | 12 | 120 | 11 | 131 | 1.81e-37 | 129 |
Msa0369020 | AT1G77450.1 | 48.438 | 128 | 52 | 2 | 6 | 120 | 8 | 134 | 5.35e-37 | 127 |
Msa0369020 | AT5G24590.2 | 51.613 | 124 | 44 | 2 | 12 | 119 | 17 | 140 | 7.02e-37 | 130 |
Msa0369020 | AT5G46590.1 | 46.043 | 139 | 59 | 2 | 12 | 134 | 10 | 148 | 1.07e-36 | 127 |
Msa0369020 | AT5G46590.2 | 47.727 | 132 | 53 | 2 | 12 | 127 | 10 | 141 | 1.42e-36 | 126 |
Msa0369020 | AT3G15510.1 | 50.000 | 124 | 47 | 2 | 12 | 120 | 21 | 144 | 1.46e-36 | 128 |
Msa0369020 | AT5G61430.2 | 79.452 | 73 | 14 | 1 | 58 | 130 | 16 | 87 | 2.69e-36 | 125 |
Msa0369020 | AT4G17980.1 | 50.000 | 126 | 46 | 2 | 12 | 120 | 10 | 135 | 2.78e-36 | 125 |
Msa0369020 | AT4G27410.3 | 46.763 | 139 | 44 | 2 | 12 | 120 | 18 | 156 | 3.09e-36 | 126 |
Msa0369020 | AT4G17980.2 | 50.000 | 126 | 46 | 2 | 12 | 120 | 10 | 135 | 6.62e-36 | 125 |
Msa0369020 | AT5G63790.1 | 50.820 | 122 | 46 | 2 | 12 | 120 | 54 | 174 | 3.07e-35 | 124 |
Msa0369020 | AT5G22290.1 | 45.385 | 130 | 57 | 1 | 12 | 127 | 25 | 154 | 3.62e-35 | 124 |
Msa0369020 | AT5G63790.2 | 50.820 | 122 | 46 | 2 | 12 | 120 | 64 | 184 | 3.75e-35 | 124 |
Msa0369020 | AT1G69490.1 | 50.820 | 122 | 47 | 1 | 12 | 120 | 13 | 134 | 4.41e-35 | 122 |
Msa0369020 | AT4G28530.1 | 46.099 | 141 | 45 | 4 | 12 | 121 | 14 | 154 | 8.53e-35 | 123 |
Msa0369020 | AT3G44290.2 | 46.875 | 128 | 54 | 1 | 12 | 125 | 18 | 145 | 3.31e-34 | 119 |
Msa0369020 | AT3G10480.3 | 43.949 | 157 | 40 | 1 | 12 | 120 | 31 | 187 | 9.43e-34 | 123 |
Msa0369020 | AT5G64060.1 | 41.135 | 141 | 68 | 1 | 5 | 130 | 3 | 143 | 1.05e-33 | 120 |
Msa0369020 | AT1G34190.1 | 47.287 | 129 | 53 | 1 | 12 | 125 | 20 | 148 | 1.50e-33 | 123 |
Msa0369020 | AT3G44290.1 | 46.970 | 132 | 55 | 2 | 8 | 125 | 15 | 145 | 4.09e-33 | 119 |
Msa0369020 | AT1G32510.1 | 44.138 | 145 | 59 | 2 | 12 | 134 | 10 | 154 | 4.27e-33 | 117 |
Msa0369020 | AT1G34180.3 | 47.287 | 129 | 53 | 1 | 12 | 125 | 20 | 148 | 4.62e-33 | 120 |
Msa0369020 | AT5G09330.5 | 41.844 | 141 | 67 | 1 | 5 | 130 | 3 | 143 | 9.16e-33 | 120 |
Msa0369020 | AT5G09330.2 | 41.844 | 141 | 67 | 1 | 5 | 130 | 3 | 143 | 9.16e-33 | 120 |
Msa0369020 | AT5G09330.4 | 41.844 | 141 | 67 | 1 | 5 | 130 | 3 | 143 | 9.16e-33 | 120 |
Msa0369020 | AT5G09330.3 | 41.844 | 141 | 67 | 1 | 5 | 130 | 3 | 143 | 9.16e-33 | 120 |
Msa0369020 | AT5G09330.1 | 41.844 | 141 | 67 | 1 | 5 | 130 | 3 | 143 | 9.16e-33 | 120 |
Msa0369020 | AT1G26870.1 | 50.000 | 124 | 45 | 3 | 12 | 119 | 20 | 142 | 1.00e-32 | 119 |
Msa0369020 | AT1G34180.1 | 47.287 | 129 | 53 | 1 | 12 | 125 | 20 | 148 | 2.56e-32 | 119 |
Msa0369020 | AT1G34180.2 | 43.972 | 141 | 52 | 1 | 12 | 125 | 20 | 160 | 3.96e-32 | 119 |
Msa0369020 | AT1G52880.1 | 48.062 | 129 | 50 | 2 | 12 | 123 | 21 | 149 | 4.03e-32 | 115 |
Msa0369020 | AT1G34180.4 | 43.972 | 141 | 52 | 1 | 12 | 125 | 20 | 160 | 5.83e-32 | 117 |
Msa0369020 | AT2G43000.1 | 41.860 | 129 | 62 | 1 | 12 | 127 | 22 | 150 | 2.56e-31 | 112 |
Msa0369020 | AT3G12910.1 | 46.825 | 126 | 50 | 3 | 12 | 120 | 25 | 150 | 5.71e-31 | 112 |
Msa0369020 | AT5G39820.1 | 45.113 | 133 | 58 | 2 | 12 | 129 | 24 | 156 | 5.81e-31 | 113 |
Msa0369020 | AT2G02450.1 | 46.341 | 123 | 52 | 2 | 12 | 120 | 55 | 177 | 1.52e-30 | 112 |
Msa0369020 | AT2G02450.2 | 46.341 | 123 | 52 | 2 | 12 | 120 | 55 | 177 | 6.73e-30 | 111 |
Msa0369020 | AT2G17040.1 | 43.284 | 134 | 59 | 3 | 6 | 123 | 5 | 137 | 1.12e-28 | 105 |
Msa0369020 | AT3G12977.2 | 61.333 | 75 | 29 | 0 | 51 | 125 | 21 | 95 | 3.45e-28 | 103 |
Msa0369020 | AT1G56010.1 | 63.014 | 73 | 27 | 0 | 51 | 123 | 9 | 81 | 4.34e-28 | 103 |
Msa0369020 | AT4G10350.2 | 63.636 | 77 | 28 | 0 | 58 | 134 | 28 | 104 | 1.70e-27 | 103 |
Msa0369020 | AT1G32870.2 | 48.387 | 124 | 47 | 2 | 12 | 120 | 14 | 135 | 5.26e-27 | 104 |
Msa0369020 | AT1G32870.1 | 48.387 | 124 | 47 | 2 | 12 | 120 | 14 | 135 | 5.27e-27 | 104 |
Msa0369020 | AT1G32870.3 | 48.387 | 124 | 47 | 2 | 12 | 120 | 50 | 171 | 6.55e-27 | 104 |
Msa0369020 | AT5G04395.1 | 41.135 | 141 | 54 | 2 | 12 | 123 | 32 | 172 | 7.93e-27 | 99.0 |
Msa0369020 | AT2G33480.3 | 65.574 | 61 | 21 | 0 | 60 | 120 | 20 | 80 | 3.05e-24 | 93.2 |
Msa0369020 | AT3G10490.4 | 75.472 | 53 | 13 | 0 | 68 | 120 | 2 | 54 | 1.29e-22 | 91.3 |
Msa0369020 | AT3G10490.3 | 75.472 | 53 | 13 | 0 | 68 | 120 | 2 | 54 | 1.29e-22 | 91.3 |
Msa0369020 | AT5G22380.1 | 36.111 | 144 | 72 | 3 | 7 | 130 | 4 | 147 | 2.18e-22 | 88.6 |
Msa0369020 | AT3G44350.1 | 39.394 | 132 | 61 | 4 | 7 | 119 | 4 | 135 | 1.66e-21 | 84.7 |
Msa0369020 | AT4G01550.1 | 42.188 | 128 | 55 | 5 | 12 | 120 | 8 | 135 | 3.13e-21 | 88.2 |
Msa0369020 | AT3G44350.2 | 39.394 | 132 | 61 | 4 | 7 | 119 | 4 | 135 | 7.73e-21 | 84.7 |
Msa0369020 | AT5G64530.2 | 38.793 | 116 | 60 | 4 | 12 | 120 | 7 | 118 | 1.05e-20 | 82.4 |
Msa0369020 | AT5G64530.1 | 38.793 | 116 | 60 | 4 | 12 | 120 | 7 | 118 | 2.22e-20 | 82.4 |
Msa0369020 | AT3G04420.2 | 37.097 | 124 | 61 | 2 | 12 | 118 | 7 | 130 | 4.46e-20 | 83.6 |
Msa0369020 | AT1G02230.1 | 40.945 | 127 | 52 | 5 | 12 | 118 | 7 | 130 | 4.58e-20 | 84.3 |
Msa0369020 | AT3G04420.1 | 37.097 | 124 | 61 | 2 | 12 | 118 | 7 | 130 | 5.17e-20 | 84.3 |
Msa0369020 | AT2G18060.2 | 64.706 | 51 | 18 | 0 | 73 | 123 | 2 | 52 | 1.15e-19 | 82.4 |
Msa0369020 | AT4G28530.2 | 41.346 | 104 | 32 | 3 | 12 | 86 | 14 | 117 | 1.74e-18 | 79.7 |
Msa0369020 | AT5G22290.2 | 57.407 | 54 | 23 | 0 | 74 | 127 | 2 | 55 | 1.89e-18 | 78.6 |
Msa0369020 | AT4G01540.4 | 37.984 | 129 | 60 | 4 | 12 | 120 | 8 | 136 | 5.25e-18 | 79.0 |
Msa0369020 | AT2G43000.2 | 47.826 | 69 | 36 | 0 | 59 | 127 | 4 | 72 | 5.75e-18 | 76.3 |
Msa0369020 | AT4G01540.3 | 37.984 | 129 | 60 | 4 | 12 | 120 | 8 | 136 | 6.04e-18 | 79.0 |
Msa0369020 | AT4G01540.1 | 37.984 | 129 | 60 | 4 | 12 | 120 | 8 | 136 | 6.14e-18 | 79.0 |
Msa0369020 | AT4G01540.2 | 37.984 | 129 | 60 | 4 | 12 | 120 | 8 | 136 | 6.64e-18 | 79.0 |
Msa0369020 | AT4G01520.1 | 36.434 | 129 | 62 | 5 | 12 | 120 | 8 | 136 | 1.22e-17 | 77.4 |
Msa0369020 | AT1G01010.1 | 35.417 | 144 | 60 | 6 | 12 | 128 | 7 | 144 | 1.75e-17 | 77.8 |
Msa0369020 | AT1G02220.1 | 36.290 | 124 | 59 | 4 | 12 | 118 | 7 | 127 | 1.72e-16 | 74.7 |
Msa0369020 | AT1G02250.1 | 35.433 | 127 | 59 | 4 | 12 | 118 | 7 | 130 | 3.32e-15 | 70.9 |
Msa0369020 | AT5G50820.1 | 35.294 | 119 | 66 | 3 | 12 | 120 | 21 | 138 | 4.82e-15 | 68.6 |
Msa0369020 | AT5G14000.2 | 32.258 | 124 | 71 | 3 | 12 | 122 | 19 | 142 | 7.78e-14 | 64.7 |
Msa0369020 | AT3G56530.1 | 30.556 | 144 | 84 | 4 | 8 | 135 | 52 | 195 | 9.40e-14 | 66.6 |
Msa0369020 | AT5G14000.1 | 32.258 | 124 | 71 | 3 | 12 | 122 | 19 | 142 | 2.88e-13 | 64.3 |
Msa0369020 | AT5G18300.1 | 35.484 | 124 | 67 | 5 | 10 | 123 | 16 | 136 | 2.25e-11 | 58.2 |
Msa0369020 | AT3G04430.1 | 34.848 | 132 | 59 | 5 | 14 | 119 | 6 | 136 | 2.37e-11 | 58.9 |
Find 31 sgRNAs with CRISPR-Local
Find 154 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCAAGGGAAATGCATTAAT+TGG | 0.121823 | 3_1:-66143904 | Msa0369020:CDS |
AAATCATTACCTTGTCAAAA+AGG | 0.228485 | 3_1:-66145021 | Msa0369020:CDS |
GAGCTACTAATGCTGGATAT+TGG | 0.349984 | 3_1:-66143954 | Msa0369020:CDS |
TCCAGCATTAGTAGCTCTAT+TGG | 0.388516 | 3_1:+66143960 | None:intergenic |
TATTGGTCCTTTGACCAGTT+GGG | 0.417126 | 3_1:+66143977 | None:intergenic |
TCAAGGGAAATGCATTAATT+GGG | 0.420828 | 3_1:-66143903 | Msa0369020:CDS |
CGAGTGGTGAAAAGACCAAT+TGG | 0.426528 | 3_1:-66143843 | Msa0369020:CDS |
CTATTGGTCCTTTGACCAGT+TGG | 0.441493 | 3_1:+66143976 | None:intergenic |
ACCAATAGAGCTACTAATGC+TGG | 0.453301 | 3_1:-66143961 | Msa0369020:CDS |
GCTGGATATTGGAAAGCAAC+AGG | 0.464158 | 3_1:-66143943 | Msa0369020:CDS |
TCAAAATATGGAAAATGAAA+AGG | 0.477070 | 3_1:-66145093 | None:intergenic |
GTATTCATGCATGACCCAAT+TGG | 0.496635 | 3_1:+66143828 | None:intergenic |
AGGGAGAGAAAATACCCAAC+TGG | 0.524633 | 3_1:-66143991 | Msa0369020:intron |
TTACCATTCCATGTGTGGAT+AGG | 0.526862 | 3_1:+66143773 | None:intergenic |
ATGATTTATAAGCTCTTCAT+CGG | 0.528076 | 3_1:+66145037 | None:intergenic |
TTTATAAGCTCTTCATCGGT+CGG | 0.530344 | 3_1:+66145041 | None:intergenic |
AATTGGGATGAAGAAAACAT+TGG | 0.537739 | 3_1:-66143887 | Msa0369020:CDS |
GAGTGGTGAAAAGACCAATT+GGG | 0.539850 | 3_1:-66143842 | Msa0369020:CDS |
CAACCTATCCACACATGGAA+TGG | 0.547037 | 3_1:-66143776 | None:intergenic |
AATTTACCTGGCAAATCCCA+TGG | 0.560572 | 3_1:+66144939 | None:intergenic |
TGTGAACCATGGGATTTGCC+AGG | 0.562377 | 3_1:-66144945 | Msa0369020:CDS |
CAATATTACCATTCCATGTG+TGG | 0.569497 | 3_1:+66143768 | None:intergenic |
GGTCATGCATGAATACCGAT+TGG | 0.581760 | 3_1:-66143821 | Msa0369020:CDS |
AGAGTGTGTTACCCTCCAAT+CGG | 0.588761 | 3_1:+66143806 | None:intergenic |
CATGCATGAATACCGATTGG+AGG | 0.592763 | 3_1:-66143818 | Msa0369020:CDS |
GAAAATACCCAACTGGTCAA+AGG | 0.598845 | 3_1:-66143984 | Msa0369020:CDS |
ATGCATGAATACCGATTGGA+GGG | 0.621001 | 3_1:-66143817 | Msa0369020:CDS |
TATGAATAAGTGTGAACCAT+GGG | 0.641317 | 3_1:-66144955 | Msa0369020:CDS |
GAGCACAACCTATCCACACA+TGG | 0.663138 | 3_1:-66143781 | Msa0369020:CDS |
ATATGAATAAGTGTGAACCA+TGG | 0.681966 | 3_1:-66144956 | Msa0369020:CDS |
TACATAGGAAGAGCTCCGAG+TGG | 0.745847 | 3_1:-66143859 | Msa0369020:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAGAAAGAAAAACAATT+TGG | - | chr3_1:66144429-66144448 | Msa0369020:intron | 15.0% |
!!! | AATTATGCTTTCTTATTTTT+TGG | - | chr3_1:66144796-66144815 | Msa0369020:intron | 15.0% |
!! | AAAAAGAAAGAAAAACAATT+TGG | - | chr3_1:66144429-66144448 | Msa0369020:intron | 15.0% |
!!! | AATTATGCTTTCTTATTTTT+TGG | - | chr3_1:66144796-66144815 | Msa0369020:intron | 15.0% |
!! | AAAAACACATTAAATTTACC+TGG | + | chr3_1:66143939-66143958 | None:intergenic | 20.0% |
!!! | CATACTACTATTGTTTTTTT+TGG | + | chr3_1:66144006-66144025 | None:intergenic | 20.0% |
!! | CAAAAAAAACAATAGTAGTA+TGG | - | chr3_1:66144004-66144023 | Msa0369020:intron | 20.0% |
!! | ATGAAAAAGAAGAAGAAAAA+TGG | - | chr3_1:66144507-66144526 | Msa0369020:intron | 20.0% |
!! | AAAAACACATTAAATTTACC+TGG | + | chr3_1:66143939-66143958 | None:intergenic | 20.0% |
!!! | CATACTACTATTGTTTTTTT+TGG | + | chr3_1:66144006-66144025 | None:intergenic | 20.0% |
!! | CAAAAAAAACAATAGTAGTA+TGG | - | chr3_1:66144004-66144023 | Msa0369020:intron | 20.0% |
!! | ATGAAAAAGAAGAAGAAAAA+TGG | - | chr3_1:66144507-66144526 | Msa0369020:intron | 20.0% |
!! | AAATGAAAAGGTCGAATTTT+CGG | - | chr3_1:66143782-66143801 | Msa0369020:CDS | 25.0% |
! | ATGATTTATAAGCTCTTCAT+CGG | + | chr3_1:66143829-66143848 | None:intergenic | 25.0% |
! | AAATCATTACCTTGTCAAAA+AGG | - | chr3_1:66143842-66143861 | Msa0369020:CDS | 25.0% |
! | CACATAAATTAAGTCTTCTT+TGG | + | chr3_1:66144389-66144408 | None:intergenic | 25.0% |
! | CAAAGAAGACTTAATTTATG+TGG | - | chr3_1:66144387-66144406 | Msa0369020:intron | 25.0% |
! | GAAAGAAAAACAATTTGGAA+TGG | - | chr3_1:66144434-66144453 | Msa0369020:intron | 25.0% |
!! | TGATAACGACAATATTTCTA+AGG | + | chr3_1:66144579-66144598 | None:intergenic | 25.0% |
!!! | TTTTAAAGTTATTACGAGTG+TGG | - | chr3_1:66144718-66144737 | Msa0369020:intron | 25.0% |
!!! | TTTTTTGGTTTATTCAGAGA+TGG | - | chr3_1:66144811-66144830 | Msa0369020:intron | 25.0% |
!! | AAAGACAAAGAGATTTTCAA+GGG | - | chr3_1:66144944-66144963 | Msa0369020:CDS | 25.0% |
!!! | AAAACATTGGTTTTCTACAT+AGG | - | chr3_1:66144989-66145008 | Msa0369020:CDS | 25.0% |
!! | AAATGAAAAGGTCGAATTTT+CGG | - | chr3_1:66143782-66143801 | Msa0369020:CDS | 25.0% |
! | ATGATTTATAAGCTCTTCAT+CGG | + | chr3_1:66143829-66143848 | None:intergenic | 25.0% |
! | AAATCATTACCTTGTCAAAA+AGG | - | chr3_1:66143842-66143861 | Msa0369020:CDS | 25.0% |
! | CACATAAATTAAGTCTTCTT+TGG | + | chr3_1:66144389-66144408 | None:intergenic | 25.0% |
! | CAAAGAAGACTTAATTTATG+TGG | - | chr3_1:66144387-66144406 | Msa0369020:intron | 25.0% |
! | GAAAGAAAAACAATTTGGAA+TGG | - | chr3_1:66144434-66144453 | Msa0369020:intron | 25.0% |
!! | TGATAACGACAATATTTCTA+AGG | + | chr3_1:66144579-66144598 | None:intergenic | 25.0% |
!!! | TTTTAAAGTTATTACGAGTG+TGG | - | chr3_1:66144718-66144737 | Msa0369020:intron | 25.0% |
!!! | TTTTTTGGTTTATTCAGAGA+TGG | - | chr3_1:66144811-66144830 | Msa0369020:intron | 25.0% |
!! | AAAGACAAAGAGATTTTCAA+GGG | - | chr3_1:66144944-66144963 | Msa0369020:CDS | 25.0% |
!!! | AAAACATTGGTTTTCTACAT+AGG | - | chr3_1:66144989-66145008 | Msa0369020:CDS | 25.0% |
! | AATGAAAAGGTCGAATTTTC+GGG | - | chr3_1:66143783-66143802 | Msa0369020:CDS | 30.0% |
ATATGAATAAGTGTGAACCA+TGG | - | chr3_1:66143907-66143926 | Msa0369020:CDS | 30.0% | |
TATGAATAAGTGTGAACCAT+GGG | - | chr3_1:66143908-66143927 | Msa0369020:CDS | 30.0% | |
CATCAATGTTACAGATATGT+AGG | + | chr3_1:66144206-66144225 | None:intergenic | 30.0% | |
! | ACAATTTGGAATGGTGATTA+CGG | - | chr3_1:66144443-66144462 | Msa0369020:intron | 30.0% |
! | TACCAATGAAGGATGTTTTA+GGG | + | chr3_1:66144480-66144499 | None:intergenic | 30.0% |
TCGTTATCATCTTACTTTGA+TGG | - | chr3_1:66144590-66144609 | Msa0369020:intron | 30.0% | |
AATGTATGCACTATGTCTTT+CGG | - | chr3_1:66144760-66144779 | Msa0369020:intron | 30.0% | |
TTATTCAGAGATGGCTAAAA+TGG | - | chr3_1:66144820-66144839 | Msa0369020:intron | 30.0% | |
TATTCAGAGATGGCTAAAAT+GGG | - | chr3_1:66144821-66144840 | Msa0369020:intron | 30.0% | |
!!! | AATGGTATTTTTTCTGTGTG+AGG | - | chr3_1:66144852-66144871 | Msa0369020:intron | 30.0% |
!!! | ATGGTATTTTTTCTGTGTGA+GGG | - | chr3_1:66144853-66144872 | Msa0369020:intron | 30.0% |
! | CAAAGACAAAGAGATTTTCA+AGG | - | chr3_1:66144943-66144962 | Msa0369020:CDS | 30.0% |
TTCAAGGGAAATGCATTAAT+TGG | - | chr3_1:66144959-66144978 | Msa0369020:CDS | 30.0% | |
TCAAGGGAAATGCATTAATT+GGG | - | chr3_1:66144960-66144979 | Msa0369020:CDS | 30.0% | |
AATTGGGATGAAGAAAACAT+TGG | - | chr3_1:66144976-66144995 | Msa0369020:CDS | 30.0% | |
! | AATGAAAAGGTCGAATTTTC+GGG | - | chr3_1:66143783-66143802 | Msa0369020:CDS | 30.0% |
ATATGAATAAGTGTGAACCA+TGG | - | chr3_1:66143907-66143926 | Msa0369020:CDS | 30.0% | |
TATGAATAAGTGTGAACCAT+GGG | - | chr3_1:66143908-66143927 | Msa0369020:CDS | 30.0% | |
CATCAATGTTACAGATATGT+AGG | + | chr3_1:66144206-66144225 | None:intergenic | 30.0% | |
! | ACAATTTGGAATGGTGATTA+CGG | - | chr3_1:66144443-66144462 | Msa0369020:intron | 30.0% |
! | TACCAATGAAGGATGTTTTA+GGG | + | chr3_1:66144480-66144499 | None:intergenic | 30.0% |
TCGTTATCATCTTACTTTGA+TGG | - | chr3_1:66144590-66144609 | Msa0369020:intron | 30.0% | |
AATGTATGCACTATGTCTTT+CGG | - | chr3_1:66144760-66144779 | Msa0369020:intron | 30.0% | |
TTATTCAGAGATGGCTAAAA+TGG | - | chr3_1:66144820-66144839 | Msa0369020:intron | 30.0% | |
TATTCAGAGATGGCTAAAAT+GGG | - | chr3_1:66144821-66144840 | Msa0369020:intron | 30.0% | |
!!! | AATGGTATTTTTTCTGTGTG+AGG | - | chr3_1:66144852-66144871 | Msa0369020:intron | 30.0% |
!!! | ATGGTATTTTTTCTGTGTGA+GGG | - | chr3_1:66144853-66144872 | Msa0369020:intron | 30.0% |
! | CAAAGACAAAGAGATTTTCA+AGG | - | chr3_1:66144943-66144962 | Msa0369020:CDS | 30.0% |
TTCAAGGGAAATGCATTAAT+TGG | - | chr3_1:66144959-66144978 | Msa0369020:CDS | 30.0% | |
TCAAGGGAAATGCATTAATT+GGG | - | chr3_1:66144960-66144979 | Msa0369020:CDS | 30.0% | |
AATTGGGATGAAGAAAACAT+TGG | - | chr3_1:66144976-66144995 | Msa0369020:CDS | 30.0% | |
TTTATAAGCTCTTCATCGGT+CGG | + | chr3_1:66143825-66143844 | None:intergenic | 35.0% | |
! | TGTCATCAACCTTTTTGACA+AGG | + | chr3_1:66143854-66143873 | None:intergenic | 35.0% |
! | TTTTCGCAGATTCATCTGTT+TGG | + | chr3_1:66144123-66144142 | None:intergenic | 35.0% |
ATGCAGTGTTTATTTGACTC+AGG | + | chr3_1:66144280-66144299 | None:intergenic | 35.0% | |
CAAACAATGTCCTACTAAGA+CGG | - | chr3_1:66144345-66144364 | Msa0369020:intron | 35.0% | |
TATGATTTCACCGTCTTAGT+AGG | + | chr3_1:66144358-66144377 | None:intergenic | 35.0% | |
! | CAATTTGGAATGGTGATTAC+GGG | - | chr3_1:66144444-66144463 | Msa0369020:intron | 35.0% |
AACCCTAAAACATCCTTCAT+TGG | - | chr3_1:66144475-66144494 | Msa0369020:intron | 35.0% | |
! | CTACCAATGAAGGATGTTTT+AGG | + | chr3_1:66144481-66144500 | None:intergenic | 35.0% |
AAGAAAAATGGTGACCACTA+GGG | - | chr3_1:66144519-66144538 | Msa0369020:intron | 35.0% | |
CCTTACACATTATGATGTGT+CGG | + | chr3_1:66144647-66144666 | None:intergenic | 35.0% | |
! | CTAAAATGGGAGAAGCATAA+TGG | - | chr3_1:66144834-66144853 | Msa0369020:intron | 35.0% |
TTTATAAGCTCTTCATCGGT+CGG | + | chr3_1:66143825-66143844 | None:intergenic | 35.0% | |
! | TGTCATCAACCTTTTTGACA+AGG | + | chr3_1:66143854-66143873 | None:intergenic | 35.0% |
! | TTTTCGCAGATTCATCTGTT+TGG | + | chr3_1:66144123-66144142 | None:intergenic | 35.0% |
ATGCAGTGTTTATTTGACTC+AGG | + | chr3_1:66144280-66144299 | None:intergenic | 35.0% | |
CAAACAATGTCCTACTAAGA+CGG | - | chr3_1:66144345-66144364 | Msa0369020:intron | 35.0% | |
TATGATTTCACCGTCTTAGT+AGG | + | chr3_1:66144358-66144377 | None:intergenic | 35.0% | |
! | CAATTTGGAATGGTGATTAC+GGG | - | chr3_1:66144444-66144463 | Msa0369020:intron | 35.0% |
AACCCTAAAACATCCTTCAT+TGG | - | chr3_1:66144475-66144494 | Msa0369020:intron | 35.0% | |
! | CTACCAATGAAGGATGTTTT+AGG | + | chr3_1:66144481-66144500 | None:intergenic | 35.0% |
AAGAAAAATGGTGACCACTA+GGG | - | chr3_1:66144519-66144538 | Msa0369020:intron | 35.0% | |
CCTTACACATTATGATGTGT+CGG | + | chr3_1:66144647-66144666 | None:intergenic | 35.0% | |
! | CTAAAATGGGAGAAGCATAA+TGG | - | chr3_1:66144834-66144853 | Msa0369020:intron | 35.0% |
AATTTACCTGGCAAATCCCA+TGG | + | chr3_1:66143927-66143946 | None:intergenic | 40.0% | |
CCAGATCTAATCAATGACTC+TGG | + | chr3_1:66144232-66144251 | None:intergenic | 40.0% | |
! | CCAGAGTCATTGATTAGATC+TGG | - | chr3_1:66144229-66144248 | Msa0369020:intron | 40.0% |
ACATCCTTCATTGGTAGATC+TGG | - | chr3_1:66144484-66144503 | Msa0369020:intron | 40.0% | |
TCATCCAGATCTACCAATGA+AGG | + | chr3_1:66144491-66144510 | None:intergenic | 40.0% | |
GAAGAAAAATGGTGACCACT+AGG | - | chr3_1:66144518-66144537 | Msa0369020:intron | 40.0% | |
CCGACACATCATAATGTGTA+AGG | - | chr3_1:66144644-66144663 | Msa0369020:intron | 40.0% | |
! | CACATCTGATAGTGTCATGT+TGG | + | chr3_1:66144678-66144697 | None:intergenic | 40.0% |
CAACATGACACTATCAGATG+TGG | - | chr3_1:66144676-66144695 | Msa0369020:intron | 40.0% | |
GAAAATACCCAACTGGTCAA+AGG | - | chr3_1:66144879-66144898 | Msa0369020:intron | 40.0% | |
TATTGGTCCTTTGACCAGTT+GGG | + | chr3_1:66144889-66144908 | None:intergenic | 40.0% | |
ACCAATAGAGCTACTAATGC+TGG | - | chr3_1:66144902-66144921 | Msa0369020:intron | 40.0% | |
! | TCCAGCATTAGTAGCTCTAT+TGG | + | chr3_1:66144906-66144925 | None:intergenic | 40.0% |
GAGCTACTAATGCTGGATAT+TGG | - | chr3_1:66144909-66144928 | Msa0369020:intron | 40.0% | |
!!! | CAATTGGTCTTTTCACCACT+CGG | + | chr3_1:66145022-66145041 | None:intergenic | 40.0% |
GAGTGGTGAAAAGACCAATT+GGG | - | chr3_1:66145021-66145040 | Msa0369020:CDS | 40.0% | |
GTATTCATGCATGACCCAAT+TGG | + | chr3_1:66145038-66145057 | None:intergenic | 40.0% | |
! | ATGCATGAATACCGATTGGA+GGG | - | chr3_1:66145046-66145065 | Msa0369020:CDS | 40.0% |
AATTTACCTGGCAAATCCCA+TGG | + | chr3_1:66143927-66143946 | None:intergenic | 40.0% | |
CCAGATCTAATCAATGACTC+TGG | + | chr3_1:66144232-66144251 | None:intergenic | 40.0% | |
! | CCAGAGTCATTGATTAGATC+TGG | - | chr3_1:66144229-66144248 | Msa0369020:intron | 40.0% |
ACATCCTTCATTGGTAGATC+TGG | - | chr3_1:66144484-66144503 | Msa0369020:intron | 40.0% | |
TCATCCAGATCTACCAATGA+AGG | + | chr3_1:66144491-66144510 | None:intergenic | 40.0% | |
GAAGAAAAATGGTGACCACT+AGG | - | chr3_1:66144518-66144537 | Msa0369020:intron | 40.0% | |
CCGACACATCATAATGTGTA+AGG | - | chr3_1:66144644-66144663 | Msa0369020:intron | 40.0% | |
! | CACATCTGATAGTGTCATGT+TGG | + | chr3_1:66144678-66144697 | None:intergenic | 40.0% |
CAACATGACACTATCAGATG+TGG | - | chr3_1:66144676-66144695 | Msa0369020:intron | 40.0% | |
GAAAATACCCAACTGGTCAA+AGG | - | chr3_1:66144879-66144898 | Msa0369020:intron | 40.0% | |
TATTGGTCCTTTGACCAGTT+GGG | + | chr3_1:66144889-66144908 | None:intergenic | 40.0% | |
ACCAATAGAGCTACTAATGC+TGG | - | chr3_1:66144902-66144921 | Msa0369020:intron | 40.0% | |
! | TCCAGCATTAGTAGCTCTAT+TGG | + | chr3_1:66144906-66144925 | None:intergenic | 40.0% |
GAGCTACTAATGCTGGATAT+TGG | - | chr3_1:66144909-66144928 | Msa0369020:intron | 40.0% | |
!!! | CAATTGGTCTTTTCACCACT+CGG | + | chr3_1:66145022-66145041 | None:intergenic | 40.0% |
GAGTGGTGAAAAGACCAATT+GGG | - | chr3_1:66145021-66145040 | Msa0369020:CDS | 40.0% | |
GTATTCATGCATGACCCAAT+TGG | + | chr3_1:66145038-66145057 | None:intergenic | 40.0% | |
! | ATGCATGAATACCGATTGGA+GGG | - | chr3_1:66145046-66145065 | Msa0369020:CDS | 40.0% |
AAATGGTGACCACTAGGGTT+TGG | - | chr3_1:66144524-66144543 | Msa0369020:intron | 45.0% | |
AGGGAGAGAAAATACCCAAC+TGG | - | chr3_1:66144872-66144891 | Msa0369020:intron | 45.0% | |
CTATTGGTCCTTTGACCAGT+TGG | + | chr3_1:66144890-66144909 | None:intergenic | 45.0% | |
GCTGGATATTGGAAAGCAAC+AGG | - | chr3_1:66144920-66144939 | Msa0369020:intron | 45.0% | |
CGAGTGGTGAAAAGACCAAT+TGG | - | chr3_1:66145020-66145039 | Msa0369020:CDS | 45.0% | |
GGTCATGCATGAATACCGAT+TGG | - | chr3_1:66145042-66145061 | Msa0369020:CDS | 45.0% | |
! | CATGCATGAATACCGATTGG+AGG | - | chr3_1:66145045-66145064 | Msa0369020:CDS | 45.0% |
AGAGTGTGTTACCCTCCAAT+CGG | + | chr3_1:66145060-66145079 | None:intergenic | 45.0% | |
AAATGGTGACCACTAGGGTT+TGG | - | chr3_1:66144524-66144543 | Msa0369020:intron | 45.0% | |
AGGGAGAGAAAATACCCAAC+TGG | - | chr3_1:66144872-66144891 | Msa0369020:intron | 45.0% | |
CTATTGGTCCTTTGACCAGT+TGG | + | chr3_1:66144890-66144909 | None:intergenic | 45.0% | |
GCTGGATATTGGAAAGCAAC+AGG | - | chr3_1:66144920-66144939 | Msa0369020:intron | 45.0% | |
CGAGTGGTGAAAAGACCAAT+TGG | - | chr3_1:66145020-66145039 | Msa0369020:CDS | 45.0% | |
GGTCATGCATGAATACCGAT+TGG | - | chr3_1:66145042-66145061 | Msa0369020:CDS | 45.0% | |
! | CATGCATGAATACCGATTGG+AGG | - | chr3_1:66145045-66145064 | Msa0369020:CDS | 45.0% |
AGAGTGTGTTACCCTCCAAT+CGG | + | chr3_1:66145060-66145079 | None:intergenic | 45.0% | |
TGTGAACCATGGGATTTGCC+AGG | - | chr3_1:66143918-66143937 | Msa0369020:CDS | 50.0% | |
TTCTCCTTGCCAAACCCTAG+TGG | + | chr3_1:66144536-66144555 | None:intergenic | 50.0% | |
TTGGCAAGGAGAAAAGCGAG+TGG | - | chr3_1:66144543-66144562 | Msa0369020:intron | 50.0% | |
TACATAGGAAGAGCTCCGAG+TGG | - | chr3_1:66145004-66145023 | Msa0369020:CDS | 50.0% | |
GAGCACAACCTATCCACACA+TGG | - | chr3_1:66145082-66145101 | Msa0369020:CDS | 50.0% | |
TGTGAACCATGGGATTTGCC+AGG | - | chr3_1:66143918-66143937 | Msa0369020:CDS | 50.0% | |
TTCTCCTTGCCAAACCCTAG+TGG | + | chr3_1:66144536-66144555 | None:intergenic | 50.0% | |
TTGGCAAGGAGAAAAGCGAG+TGG | - | chr3_1:66144543-66144562 | Msa0369020:intron | 50.0% | |
TACATAGGAAGAGCTCCGAG+TGG | - | chr3_1:66145004-66145023 | Msa0369020:CDS | 50.0% | |
GAGCACAACCTATCCACACA+TGG | - | chr3_1:66145082-66145101 | Msa0369020:CDS | 50.0% | |
GTGACCACTAGGGTTTGGCA+AGG | - | chr3_1:66144529-66144548 | Msa0369020:intron | 55.0% | |
GTGACCACTAGGGTTTGGCA+AGG | - | chr3_1:66144529-66144548 | Msa0369020:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 66143777 | 66145108 | 66143777 | ID=Msa0369020;Name=Msa0369020 |
chr3_1 | mRNA | 66143777 | 66145108 | 66143777 | ID=Msa0369020-mRNA-1;Parent=Msa0369020;Name=Msa0369020-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|0|0|2|0|135 |
chr3_1 | exon | 66144935 | 66145108 | 66144935 | ID=Msa0369020-mRNA-1:exon:13368;Parent=Msa0369020-mRNA-1 |
chr3_1 | exon | 66143777 | 66144007 | 66143777 | ID=Msa0369020-mRNA-1:exon:13367;Parent=Msa0369020-mRNA-1 |
chr3_1 | CDS | 66144935 | 66145108 | 66144935 | ID=Msa0369020-mRNA-1:cds;Parent=Msa0369020-mRNA-1 |
chr3_1 | CDS | 66143777 | 66144007 | 66143777 | ID=Msa0369020-mRNA-1:cds;Parent=Msa0369020-mRNA-1 |
Gene Sequence |
Protein sequence |