AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0369030

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369030 MtrunA17_Chr7g0217721 68.421 171 13 2 1 130 1 171 3.64e-73 224
Msa0369030 MtrunA17_Chr7g0217711 64.972 177 27 2 1 142 1 177 1.63e-72 217
Msa0369030 MtrunA17_Chr3g0113031 79.208 101 18 2 51 148 1 101 3.09e-51 166
Msa0369030 MtrunA17_Chr3g0113001 88.235 85 7 1 46 130 24 105 1.29e-48 160
Msa0369030 MtrunA17_Chr4g0060931 59.155 142 28 3 13 125 11 151 1.32e-48 162
Msa0369030 MtrunA17_Chr6g0453451 56.849 146 33 2 14 130 15 159 1.36e-47 158
Msa0369030 MtrunA17_Chr3g0091921 54.667 150 38 2 5 125 2 150 6.56e-45 150
Msa0369030 MtrunA17_Chr6g0461661 54.422 147 35 3 14 129 13 158 1.35e-43 149
Msa0369030 MtrunA17_Chr3g0113051 97.101 69 2 0 131 199 123 191 2.16e-42 141
Msa0369030 MtrunA17_Chr6g0484441 54.762 126 28 1 19 115 5 130 7.19e-42 143
Msa0369030 MtrunA17_Chr2g0316971 56.923 130 25 2 19 117 23 152 1.16e-40 141
Msa0369030 MtrunA17_Chr7g0253011 50.000 154 43 4 5 125 3 155 6.17e-39 137
Msa0369030 MtrunA17_Chr1g0147421 51.408 142 34 4 9 115 14 155 3.81e-38 134
Msa0369030 MtrunA17_Chr3g0139331 51.562 128 31 2 19 115 11 138 1.05e-37 133
Msa0369030 MtrunA17_Chr3g0144271 51.449 138 35 3 19 124 23 160 1.41e-36 132
Msa0369030 MtrunA17_Chr4g0056541 48.855 131 35 2 20 118 8 138 1.88e-35 127
Msa0369030 MtrunA17_Chr2g0312321 48.062 129 40 2 16 117 8 136 3.64e-35 125
Msa0369030 MtrunA17_Chr4g0018391 49.219 128 33 2 20 115 8 135 5.65e-35 126
Msa0369030 MtrunA17_Chr8g0346001 47.222 144 44 2 14 125 10 153 1.04e-34 127
Msa0369030 MtrunA17_Chr8g0372121 48.438 128 34 2 20 115 7 134 5.21e-34 122
Msa0369030 MtrunA17_Chr5g0398971 47.727 132 36 3 20 118 8 139 7.16e-34 123
Msa0369030 MtrunA17_Chr5g0405211 45.324 139 44 2 12 118 1 139 9.03e-34 123
Msa0369030 MtrunA17_Chr4g0017921 51.562 128 30 2 20 115 9 136 2.08e-33 122
Msa0369030 MtrunA17_Chr3g0128151 50.000 130 28 2 19 114 22 148 3.77e-33 124
Msa0369030 MtrunA17_Chr7g0214071 46.212 132 43 3 13 116 9 140 7.80e-33 118
Msa0369030 MtrunA17_Chr5g0428991 47.328 131 32 2 18 114 24 151 8.95e-33 123
Msa0369030 MtrunA17_Chr6g0481091 46.565 131 37 2 17 115 4 133 1.28e-32 117
Msa0369030 MtrunA17_Chr1g0200561 43.662 142 40 3 20 129 20 153 2.74e-32 119
Msa0369030 MtrunA17_Chr2g0309331 44.755 143 40 3 16 122 7 146 7.77e-32 117
Msa0369030 MtrunA17_Chr5g0417791 47.328 131 40 2 17 118 1 131 7.84e-32 115
Msa0369030 MtrunA17_Chr4g0042561 46.923 130 40 2 18 118 8 137 2.49e-31 114
Msa0369030 MtrunA17_Chr2g0309891 46.154 130 39 1 17 115 4 133 7.31e-31 115
Msa0369030 MtrunA17_Chr3g0128111 48.031 127 29 4 22 114 45 168 1.10e-30 112
Msa0369030 MtrunA17_Chr5g0433781 45.385 130 40 1 17 115 4 133 5.70e-30 115
Msa0369030 MtrunA17_Chr8g0359921 43.262 141 50 2 16 127 11 150 7.57e-30 112
Msa0369030 MtrunA17_Chr3g0109821 43.846 130 42 1 17 115 4 133 8.62e-30 115
Msa0369030 MtrunA17_Chr8g0384721 43.919 148 49 4 17 131 5 151 9.47e-30 111
Msa0369030 MtrunA17_Chr7g0263931 44.366 142 48 2 16 126 8 149 9.87e-30 112
Msa0369030 MtrunA17_Chr3g0130731 46.923 130 39 3 16 116 4 132 2.90e-29 110
Msa0369030 MtrunA17_Chr1g0183741 43.750 128 41 3 19 115 10 137 3.58e-29 109
Msa0369030 MtrunA17_Chr2g0318081 44.961 129 42 1 16 115 13 141 4.01e-29 110
Msa0369030 MtrunA17_Chr5g0400461 45.185 135 36 3 19 115 6 140 2.20e-28 108
Msa0369030 MtrunA17_Chr3g0124761 43.846 130 43 2 16 116 4 132 2.40e-28 107
Msa0369030 MtrunA17_Chr2g0318101 42.963 135 46 2 15 118 11 145 5.14e-28 107
Msa0369030 MtrunA17_Chr4g0054791 42.754 138 45 3 15 118 2 139 9.49e-28 106
Msa0369030 MtrunA17_Chr4g0047841 43.066 137 43 3 19 124 15 147 9.55e-28 107
Msa0369030 MtrunA17_Chr7g0261411 42.188 128 43 2 19 115 10 137 1.36e-27 105
Msa0369030 MtrunA17_Chr7g0252971 41.379 145 47 2 12 118 1 145 4.77e-27 105
Msa0369030 MtrunA17_Chr1g0197361 42.424 132 44 2 22 121 11 142 1.30e-26 106
Msa0369030 MtrunA17_Chr1g0201021 43.066 137 42 3 22 127 22 153 2.50e-26 105
Msa0369030 MtrunA17_Chr2g0326361 42.029 138 49 2 19 125 14 151 6.14e-26 101
Msa0369030 MtrunA17_Chr2g0311661 38.415 164 61 6 1 126 1 162 2.21e-25 99.8
Msa0369030 MtrunA17_Chr3g0130101 37.086 151 63 3 12 131 1 150 2.52e-25 100
Msa0369030 MtrunA17_Chr3g0092671 41.667 132 45 2 22 121 8 139 2.93e-25 102
Msa0369030 MtrunA17_Chr2g0311651 35.829 187 66 7 1 147 1 173 3.12e-25 99.8
Msa0369030 MtrunA17_Chr8g0364791 38.849 139 54 1 18 125 5 143 5.97e-25 100
Msa0369030 MtrunA17_Chr8g0361731 41.791 134 46 4 15 117 11 143 6.82e-25 100
Msa0369030 MtrunA17_Chr3g0113041 83.019 53 9 0 1 53 1 53 4.56e-24 90.5
Msa0369030 MtrunA17_Chr8g0385991 38.346 133 53 3 12 115 7 139 5.22e-24 94.7
Msa0369030 MtrunA17_Chr5g0417001 42.424 132 44 4 15 115 11 141 1.34e-23 96.7
Msa0369030 MtrunA17_Chr3g0113011 77.358 53 12 0 1 53 1 53 1.56e-23 89.0
Msa0369030 MtrunA17_Chr1g0197351 43.089 123 39 1 22 113 45 167 2.50e-23 96.3
Msa0369030 MtrunA17_Chr6g0453131 41.129 124 43 3 22 115 18 141 4.31e-23 95.1
Msa0369030 MtrunA17_Chr8g0384201 37.500 136 54 2 18 122 5 140 5.63e-23 95.5
Msa0369030 MtrunA17_Chr4g0038751 36.424 151 60 4 1 119 1 147 6.15e-23 93.2
Msa0369030 MtrunA17_Chr4g0076731 41.935 124 42 3 22 115 57 180 1.52e-22 94.0
Msa0369030 MtrunA17_Chr8g0386501 63.934 61 22 0 131 191 115 175 2.36e-22 90.1
Msa0369030 MtrunA17_Chr7g0247111 44.660 103 47 3 99 191 77 179 3.53e-22 89.7
Msa0369030 MtrunA17_Chr8g0349391 63.158 57 21 0 131 187 117 173 4.69e-22 89.0
Msa0369030 MtrunA17_Chr8g0349391 51.923 52 25 0 130 181 22 73 4.94e-12 62.4
Msa0369030 MtrunA17_Chr8g0345691 41.221 131 36 5 20 113 13 139 8.47e-22 91.7
Msa0369030 MtrunA17_Chr7g0243371 56.923 65 26 1 53 115 27 91 1.61e-21 85.1
Msa0369030 MtrunA17_Chr2g0321741 53.521 71 33 0 43 113 46 116 1.85e-21 90.1
Msa0369030 MtrunA17_Chr3g0131911 37.500 136 54 3 12 116 7 142 1.52e-20 85.9
Msa0369030 MtrunA17_Chr8g0345671 40.458 131 43 5 20 116 12 141 1.70e-20 87.8
Msa0369030 MtrunA17_Chr4g0026141 38.931 131 45 3 19 114 5 135 3.58e-20 85.1
Msa0369030 MtrunA17_Chr5g0442771 37.143 140 54 5 8 115 9 146 4.95e-20 85.9
Msa0369030 MtrunA17_Chr2g0321631 38.168 131 45 5 20 114 5 135 1.30e-17 78.2
Msa0369030 MtrunA17_Chr7g0266701 35.606 132 49 3 19 114 4 135 1.35e-17 78.2
Msa0369030 MtrunA17_Chr4g0050701 36.667 120 53 4 19 115 11 130 3.30e-17 75.9
Msa0369030 MtrunA17_Chr1g0152431 62.264 53 20 0 131 183 123 175 8.25e-16 72.4
Msa0369030 MtrunA17_Chr4g0059371 47.458 59 31 0 131 189 123 181 2.40e-15 70.9
Msa0369030 MtrunA17_Chr8g0345741 46.914 81 40 3 38 116 42 121 2.52e-14 67.4
Msa0369030 MtrunA17_Chr8g0345721 47.436 78 38 3 38 113 115 191 2.59e-14 68.6
Msa0369030 MtrunA17_Chr3g0130321 28.571 140 75 2 15 129 3 142 4.65e-13 65.1
Msa0369030 MtrunA17_Chr2g0282871 29.814 161 69 4 2 118 36 196 4.42e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369030 AT5G07680.1 56.944 144 32 2 11 125 9 151 5.31e-47 157
Msa0369030 AT5G61430.1 56.338 142 32 2 13 125 10 150 2.50e-46 155
Msa0369030 AT3G29035.1 56.250 144 34 1 3 117 8 151 4.95e-46 154
Msa0369030 AT5G07680.2 57.971 138 28 2 17 125 1 137 2.09e-45 152
Msa0369030 AT5G39610.1 56.716 134 29 1 13 117 14 147 3.11e-43 146
Msa0369030 AT3G04060.1 53.691 149 38 3 7 125 8 155 2.36e-42 145
Msa0369030 AT5G18270.2 55.639 133 29 2 15 117 17 149 1.16e-41 143
Msa0369030 AT5G18270.1 55.639 133 29 2 15 117 17 149 1.25e-41 143
Msa0369030 AT5G53950.1 56.115 139 29 3 19 126 17 154 1.03e-40 142
Msa0369030 AT3G18400.1 54.762 126 28 2 19 115 5 130 1.55e-40 140
Msa0369030 AT2G24430.2 53.285 137 33 2 10 115 7 143 1.95e-40 140
Msa0369030 AT2G24430.1 53.285 137 33 2 10 115 7 143 1.95e-40 140
Msa0369030 AT3G15170.1 52.703 148 37 5 11 127 13 158 1.00e-39 138
Msa0369030 AT2G46770.1 44.231 156 55 2 14 137 11 166 3.42e-37 132
Msa0369030 AT1G76420.1 50.000 142 40 2 13 123 16 157 1.03e-36 130
Msa0369030 AT5G61430.2 73.750 80 17 2 46 125 12 87 1.44e-36 129
Msa0369030 AT1G62700.1 49.231 130 34 2 18 115 6 135 2.41e-35 128
Msa0369030 AT1G62700.2 49.231 130 34 2 18 115 6 135 2.41e-35 128
Msa0369030 AT3G55770.3 90.323 62 6 0 131 192 121 182 3.03e-35 123
Msa0369030 AT3G55770.3 44.928 69 37 1 130 198 22 89 2.78e-12 63.2
Msa0369030 AT3G55770.5 90.323 62 6 0 131 192 121 182 3.03e-35 123
Msa0369030 AT3G55770.5 44.928 69 37 1 130 198 22 89 2.78e-12 63.2
Msa0369030 AT3G55770.2 90.323 62 6 0 131 192 121 182 3.03e-35 123
Msa0369030 AT3G55770.2 44.928 69 37 1 130 198 22 89 2.78e-12 63.2
Msa0369030 AT3G55770.1 90.323 62 6 0 131 192 121 182 3.03e-35 123
Msa0369030 AT3G55770.1 44.928 69 37 1 130 198 22 89 2.78e-12 63.2
Msa0369030 AT1G12260.2 50.000 128 32 2 20 115 8 135 5.44e-35 126
Msa0369030 AT4G36160.1 47.445 137 40 2 14 118 5 141 6.24e-35 127
Msa0369030 AT4G36160.3 47.445 137 40 2 14 118 5 141 6.24e-35 127
Msa0369030 AT4G36160.2 47.445 137 40 2 14 118 9 145 6.75e-35 127
Msa0369030 AT2G39900.1 91.803 61 5 0 131 191 122 182 6.84e-35 122
Msa0369030 AT1G12260.1 50.000 128 32 2 20 115 8 135 7.97e-35 127
Msa0369030 AT3G55770.7 90.323 62 6 0 131 192 155 216 1.61e-34 122
Msa0369030 AT3G55770.7 44.928 69 37 1 130 198 22 89 4.91e-12 63.2
Msa0369030 AT5G62380.2 48.062 129 35 2 19 115 7 135 4.18e-34 124
Msa0369030 AT5G62380.1 48.062 129 35 2 19 115 7 135 4.18e-34 124
Msa0369030 AT4G10350.1 47.586 145 44 2 20 132 10 154 7.06e-34 123
Msa0369030 AT1G33060.1 48.529 136 33 3 19 120 24 156 1.09e-33 126
Msa0369030 AT1G33060.2 48.529 136 33 3 19 120 24 156 1.10e-33 126
Msa0369030 AT1G71930.2 43.704 135 44 2 19 121 9 143 1.19e-33 122
Msa0369030 AT1G71930.1 43.704 135 44 2 19 121 9 143 1.19e-33 122
Msa0369030 AT4G35580.1 48.819 127 34 3 19 114 9 135 1.59e-33 125
Msa0369030 AT4G35580.3 50.000 130 28 3 19 114 9 135 1.73e-33 125
Msa0369030 AT4G35580.2 50.000 130 28 3 19 114 9 135 1.90e-33 125
Msa0369030 AT2G18060.3 45.588 136 42 2 15 118 5 140 2.14e-33 122
Msa0369030 AT2G18060.1 45.588 136 42 2 15 118 5 140 2.14e-33 122
Msa0369030 AT1G56010.2 42.568 148 55 2 1 118 1 148 2.21e-33 122
Msa0369030 AT2G33480.2 46.825 126 41 2 17 116 13 138 8.37e-33 119
Msa0369030 AT2G33480.1 46.825 126 41 2 17 116 13 138 9.74e-33 119
Msa0369030 AT3G61910.1 45.324 139 44 2 14 120 6 144 1.46e-32 120
Msa0369030 AT3G12977.1 45.802 131 42 2 19 120 18 148 2.20e-32 118
Msa0369030 AT3G17730.1 47.692 130 37 3 17 115 4 133 3.60e-32 116
Msa0369030 AT5G13180.1 44.697 132 45 3 12 115 7 138 4.10e-32 116
Msa0369030 AT1G33280.1 47.656 128 35 2 20 115 9 136 4.98e-32 117
Msa0369030 AT1G32770.1 46.429 140 43 2 14 121 11 150 1.13e-31 118
Msa0369030 AT5G66300.1 45.669 127 37 2 19 113 12 138 3.53e-31 115
Msa0369030 AT3G49530.2 42.308 156 48 5 4 124 2 150 5.58e-31 117
Msa0369030 AT5G46590.1 42.000 150 49 4 19 133 6 152 6.87e-31 114
Msa0369030 AT3G49530.1 42.308 156 48 5 4 124 2 150 6.92e-31 117
Msa0369030 AT5G46590.2 44.604 139 39 4 19 122 6 141 8.03e-31 114
Msa0369030 AT3G10500.1 42.553 141 50 2 22 131 12 152 2.74e-30 116
Msa0369030 AT3G10490.1 49.206 126 33 3 22 116 30 155 4.70e-30 111
Msa0369030 AT5G24590.2 45.255 137 37 4 19 120 13 146 5.05e-30 115
Msa0369030 AT1G65910.1 44.615 130 41 2 17 115 4 133 5.82e-30 116
Msa0369030 AT5G04410.1 43.262 141 49 2 22 131 12 152 1.27e-29 115
Msa0369030 AT5G17260.1 44.615 130 41 1 17 115 4 133 1.58e-29 114
Msa0369030 AT3G10490.2 49.206 126 33 3 22 116 30 155 1.91e-29 113
Msa0369030 AT3G10480.2 49.206 126 33 3 22 116 30 155 2.19e-29 113
Msa0369030 AT3G10480.1 49.206 126 33 3 22 116 30 155 2.28e-29 113
Msa0369030 AT5G08790.1 46.923 130 39 2 16 116 4 132 2.37e-29 110
Msa0369030 AT3G03200.1 44.615 130 41 1 17 115 4 133 2.79e-29 113
Msa0369030 AT1G77450.1 44.961 129 41 2 17 116 8 135 4.61e-29 108
Msa0369030 AT1G69490.1 46.032 126 39 2 19 115 9 134 5.46e-29 108
Msa0369030 AT1G01720.1 43.939 132 44 2 14 116 2 132 6.88e-29 109
Msa0369030 AT4G27410.2 44.186 129 43 2 16 115 11 139 7.37e-29 109
Msa0369030 AT1G61110.1 42.177 147 55 2 5 121 2 148 1.09e-28 109
Msa0369030 AT1G79580.3 42.000 150 51 4 16 132 14 160 1.85e-28 109
Msa0369030 AT1G79580.5 42.000 150 51 4 16 132 14 160 1.85e-28 109
Msa0369030 AT1G79580.4 42.000 150 51 4 16 132 14 160 1.85e-28 109
Msa0369030 AT1G79580.2 42.000 150 51 4 16 132 14 160 1.85e-28 109
Msa0369030 AT1G79580.1 42.000 150 51 4 16 132 14 160 1.85e-28 109
Msa0369030 AT3G15500.1 43.411 129 44 1 16 115 11 139 2.77e-28 108
Msa0369030 AT1G52890.1 44.186 129 43 1 16 115 11 139 3.45e-28 108
Msa0369030 AT2G27300.1 44.961 129 40 4 19 117 15 142 3.85e-28 108
Msa0369030 AT3G12977.2 66.176 68 23 0 53 120 28 95 4.69e-28 105
Msa0369030 AT5G63790.2 45.926 135 42 4 11 116 53 185 6.40e-28 107
Msa0369030 AT5G63790.1 45.926 135 42 4 11 116 43 175 6.72e-28 107
Msa0369030 AT4G10350.2 62.500 80 30 0 53 132 28 107 7.90e-28 106
Msa0369030 AT1G56010.1 68.182 66 21 0 53 118 16 81 8.50e-28 105
Msa0369030 AT3G04070.2 43.478 138 44 3 13 116 4 141 1.44e-27 107
Msa0369030 AT4G17980.1 43.284 134 37 3 19 116 6 136 1.80e-27 105
Msa0369030 AT3G04070.1 43.478 138 44 3 13 116 4 141 2.42e-27 106
Msa0369030 AT1G54330.1 44.615 130 41 1 17 115 4 133 3.43e-27 105
Msa0369030 AT4G17980.2 43.284 134 37 3 19 116 6 136 3.91e-27 104
Msa0369030 AT1G26870.1 43.448 145 48 5 1 114 1 142 4.46e-27 106
Msa0369030 AT5G22290.1 41.045 134 48 3 19 122 22 154 1.98e-26 103
Msa0369030 AT4G28530.1 38.621 145 42 3 18 115 9 153 3.12e-26 103
Msa0369030 AT4G27410.3 39.041 146 43 2 16 115 11 156 3.48e-26 102
Msa0369030 AT1G34190.1 42.963 135 45 3 18 120 14 148 3.78e-26 105
Msa0369030 AT2G33480.3 65.625 64 22 0 53 116 18 81 2.43e-25 98.2
Msa0369030 AT1G32510.1 39.597 149 52 3 19 129 6 154 2.80e-25 99.8
Msa0369030 AT3G10480.3 66.197 71 21 1 46 116 121 188 4.20e-25 102
Msa0369030 AT3G44290.2 40.909 132 47 3 19 120 15 145 4.77e-25 97.8
Msa0369030 AT1G34180.3 43.077 130 42 3 18 115 14 143 5.42e-25 101
Msa0369030 AT1G34180.1 43.077 130 42 3 18 115 14 143 5.95e-25 101
Msa0369030 AT3G15510.1 41.732 127 43 2 23 118 21 147 2.46e-24 98.6
Msa0369030 AT3G44290.1 40.909 132 47 3 19 120 15 145 4.11e-24 97.4
Msa0369030 AT5G39820.1 39.286 140 53 4 15 123 17 155 1.49e-23 95.9
Msa0369030 AT5G09330.5 36.879 141 58 2 16 125 3 143 2.11e-23 97.1
Msa0369030 AT5G09330.2 36.879 141 58 2 16 125 3 143 2.11e-23 97.1
Msa0369030 AT5G09330.4 36.879 141 58 2 16 125 3 143 2.11e-23 97.1
Msa0369030 AT5G09330.3 36.879 141 58 2 16 125 3 143 2.11e-23 97.1
Msa0369030 AT5G09330.1 36.879 141 58 2 16 125 3 143 2.11e-23 97.1
Msa0369030 AT1G34180.2 39.437 142 42 3 18 115 14 155 2.40e-23 97.1
Msa0369030 AT1G34180.4 39.437 142 42 3 18 115 14 155 2.45e-23 96.7
Msa0369030 AT3G10490.4 74.074 54 14 0 63 116 2 55 8.43e-23 94.4
Msa0369030 AT3G10490.3 74.074 54 14 0 63 116 2 55 8.43e-23 94.4
Msa0369030 AT2G02450.1 41.935 124 42 3 22 115 54 177 1.15e-22 94.4
Msa0369030 AT2G02450.2 41.935 124 42 3 22 115 54 177 1.18e-22 94.4
Msa0369030 AT5G64060.1 33.333 141 63 1 16 125 3 143 1.50e-22 93.6
Msa0369030 AT3G61230.1 59.016 61 25 0 131 191 120 180 5.89e-22 89.4
Msa0369030 AT3G61230.1 43.103 58 33 0 130 187 23 80 9.80e-12 62.0
Msa0369030 AT3G12910.1 40.441 136 47 4 13 115 16 150 8.26e-22 90.9
Msa0369030 AT2G17040.1 36.567 134 52 3 17 118 5 137 8.51e-22 90.1
Msa0369030 AT2G45800.2 58.462 65 27 0 131 195 88 152 1.25e-21 88.2
Msa0369030 AT2G45800.1 58.462 65 27 0 131 195 119 183 2.06e-21 88.2
Msa0369030 AT2G45800.1 48.077 52 27 0 130 181 22 73 6.76e-12 62.8
Msa0369030 AT1G32870.1 41.600 125 40 2 22 115 13 135 2.57e-21 91.3
Msa0369030 AT1G32870.2 41.600 125 40 2 22 115 13 135 2.59e-21 91.3
Msa0369030 AT1G32870.3 41.600 125 40 2 22 115 49 171 2.89e-21 91.3
Msa0369030 AT2G43000.1 35.099 151 68 3 1 122 1 150 3.69e-21 88.6
Msa0369030 AT1G52880.1 40.310 129 44 2 23 118 21 149 7.90e-20 85.5
Msa0369030 AT5G04395.1 36.552 145 47 3 19 118 28 172 9.84e-20 82.8
Msa0369030 AT2G18060.2 64.706 51 18 0 68 118 2 52 1.26e-19 84.3
Msa0369030 AT1G01780.1 48.438 64 33 0 131 194 117 180 1.29e-19 83.2
Msa0369030 AT1G01780.1 46.154 52 28 0 130 181 22 73 1.73e-11 61.2
Msa0369030 AT4G01550.1 39.259 135 47 5 17 116 2 136 1.91e-18 82.8
Msa0369030 AT4G01520.1 35.294 136 52 4 17 116 2 137 7.29e-18 80.1
Msa0369030 AT4G01540.4 36.641 131 47 4 22 116 7 137 3.76e-17 79.0
Msa0369030 AT4G01540.2 36.641 131 47 4 22 116 7 137 4.34e-17 79.0
Msa0369030 AT4G01540.3 36.641 131 47 4 22 116 7 137 4.36e-17 79.0
Msa0369030 AT4G01540.1 36.641 131 47 4 22 116 7 137 4.68e-17 79.0
Msa0369030 AT1G10200.2 40.000 115 62 3 71 183 24 133 6.66e-17 74.3
Msa0369030 AT5G22380.1 32.857 140 58 3 22 125 8 147 8.05e-17 76.3
Msa0369030 AT5G22290.2 55.556 54 24 0 69 122 2 55 8.13e-17 76.3
Msa0369030 AT2G43000.2 47.826 69 36 0 54 122 4 72 8.80e-17 75.5
Msa0369030 AT3G04420.2 35.556 135 49 3 12 113 1 130 9.34e-17 77.0
Msa0369030 AT3G04420.1 35.556 135 49 3 12 113 1 130 1.13e-16 77.0
Msa0369030 AT1G10200.1 40.000 115 62 3 71 183 66 175 2.25e-16 73.9
Msa0369030 AT3G44350.1 34.109 129 50 4 21 114 7 135 2.21e-15 70.9
Msa0369030 AT3G44350.2 34.109 129 50 4 21 114 7 135 7.70e-15 70.9
Msa0369030 AT1G02220.1 31.496 127 51 2 20 113 4 127 2.11e-13 68.2
Msa0369030 AT3G55770.6 44.928 69 37 1 130 198 22 89 2.85e-13 64.7
Msa0369030 AT3G55770.4 44.928 69 37 1 130 198 22 89 5.35e-13 63.9
Msa0369030 AT1G01010.1 30.556 144 55 5 21 123 5 144 6.25e-12 63.9
Msa0369030 AT5G50820.1 30.233 129 65 4 12 115 10 138 1.37e-11 61.2
Msa0369030 AT5G64530.1 30.081 123 59 4 17 116 1 119 5.40e-11 59.7

Find 42 sgRNAs with CRISPR-Local

Find 478 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAAGGGAAATGCATTAAT+TGG 0.121823 3_1:-66154175 Msa0369030:CDS
GCATAATTTGATGGAGTTAT+AGG 0.293254 3_1:+66147461 None:intergenic
AAATGAAAAGGTCAAATTTC+CGG 0.296027 3_1:-66155305 Msa0369030:CDS
GGCACCAACATTCAAGATTC+TGG 0.320266 3_1:+66147323 None:intergenic
TAGTAGCTCTATTGGTCCTT+TGG 0.349158 3_1:+66154239 None:intergenic
TGAACACTTGAAACATGATT+TGG 0.352807 3_1:+66147496 None:intergenic
TATTGGTCCTTTGGCCAGTT+GGG 0.376646 3_1:+66154248 None:intergenic
GAGCTACTAATGCTGGCTAT+TGG 0.387868 3_1:-66154225 Msa0369030:CDS
GCCAGCATTAGTAGCTCTAT+TGG 0.388516 3_1:+66154231 None:intergenic
TCAAATTATGCAGCCCTTGA+AGG 0.395217 3_1:-66147449 Msa0369030:CDS
TGCAGTACAAAATGCCTTCA+AGG 0.396606 3_1:+66147435 None:intergenic
TCAAGGGCTGCATAATTTGA+TGG 0.397175 3_1:+66147452 None:intergenic
TCAAGGGAAATGCATTAATT+GGG 0.420828 3_1:-66154174 Msa0369030:CDS
CTATTGGTCCTTTGGCCAGT+TGG 0.450132 3_1:+66154247 None:intergenic
GAACACTTGAAACATGATTT+GGG 0.456736 3_1:+66147497 None:intergenic
GTATTCATGCATGACCCAAT+TGG 0.462426 3_1:+66154099 None:intergenic
AAATCAATACCTTGTCAAGA+AGG 0.466786 3_1:-66155245 Msa0369030:CDS
GCTGGCTATTGGAAAGCAAC+AGG 0.467708 3_1:-66154214 Msa0369030:CDS
ACCAATAGAGCTACTAATGC+TGG 0.495849 3_1:-66154232 Msa0369030:CDS
TTGATTTATAAGCTCTTCAT+CGG 0.497039 3_1:+66155261 None:intergenic
AGGGAGAGAAAATACCCAAC+TGG 0.520226 3_1:-66154262 Msa0369030:intron
TTACCATTCCATGTGTGGAT+AGG 0.526862 3_1:+66154044 None:intergenic
GTAGGTAACAGTCGAAAGCC+AGG 0.532163 3_1:-66147525 Msa0369030:intron
TTTATAAGCTCTTCATCGGT+CGG 0.540210 3_1:+66155265 None:intergenic
GAAAAGGTCAAATTTCCGGC+TGG 0.542041 3_1:-66155301 Msa0369030:CDS
ATGCATGAATACCGATTGGC+GGG 0.543086 3_1:-66154088 Msa0369030:CDS
CAACCTATCCACACATGGAA+TGG 0.547037 3_1:-66154047 Msa0369030:intron
CTTGAAACATGATTTGGGAT+AGG 0.554637 3_1:+66147502 None:intergenic
CAATATTACCATTCCATGTG+TGG 0.569497 3_1:+66154039 None:intergenic
AGAGTGTGTTACCCGCCAAT+CGG 0.570583 3_1:+66154077 None:intergenic
CATTCAAGATTCTGGAACAG+AGG 0.575708 3_1:+66147331 None:intergenic
CATGCATGAATACCGATTGG+CGG 0.600090 3_1:-66154089 Msa0369030:CDS
AACATGATTTGGGATAGGCC+TGG 0.600433 3_1:+66147507 None:intergenic
TGTCATCAACCTTCTTGACA+AGG 0.607463 3_1:+66155236 None:intergenic
GGTCATGCATGAATACCGAT+TGG 0.609797 3_1:-66154092 Msa0369030:CDS
GCAGTACAAAATGCCTTCAA+GGG 0.612938 3_1:+66147436 None:intergenic
TCATGTTTCAAGTGTTCACA+CGG 0.626317 3_1:-66147491 Msa0369030:CDS
GGAGAGAATCGATAACCAGC+CGG 0.632530 3_1:+66155286 None:intergenic
GAAAATACCCAACTGGCCAA+AGG 0.637584 3_1:-66154255 Msa0369030:CDS
GAGCACAACCTATCCACACA+TGG 0.663138 3_1:-66154052 Msa0369030:CDS
TGTTTCAAGTGTTCACACGG+AGG 0.708270 3_1:-66147488 Msa0369030:CDS
TACAAAGGAAGAGCGCCGAG+TGG 0.721558 3_1:-66154130 Msa0369030:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAAAAAAAAAAAAAAAAA+AGG + chr3_1:66149237-66149256 None:intergenic 0.0%
!!! AATTTACTTTATTTAGAAAA+AGG + chr3_1:66148958-66148977 None:intergenic 10.0%
!! AGAAAATAATCAAATATATA+TGG + chr3_1:66150739-66150758 None:intergenic 10.0%
!!! TATATTTGATTATTTTCTTA+AGG - chr3_1:66150741-66150760 Msa0369030:intron 10.0%
!! TTTCTTTATATATATTCTTA+TGG + chr3_1:66151148-66151167 None:intergenic 10.0%
!!! TAAAAACTAATTTTTATCAA+GGG + chr3_1:66152837-66152856 None:intergenic 10.0%
!!! ATAAAAACTAATTTTTATCA+AGG + chr3_1:66152838-66152857 None:intergenic 10.0%
!!! TAAAAGTTAGTTTTTATTTT+AGG + chr3_1:66153069-66153088 None:intergenic 10.0%
!! ATTATATTATATTAGTAGTC+TGG - chr3_1:66147569-66147588 Msa0369030:intron 15.0%
!! TTAAAAAAAAAAAAACTCCA+AGG + chr3_1:66147610-66147629 None:intergenic 15.0%
!! TTAAAGACATTAAAAACTAA+AGG - chr3_1:66147668-66147687 Msa0369030:intron 15.0%
!! TAAAGACATTAAAAACTAAA+GGG - chr3_1:66147669-66147688 Msa0369030:intron 15.0%
!!! TAAAGTTTTTGTCAAAATTA+CGG + chr3_1:66148777-66148796 None:intergenic 15.0%
!!! TAGTGATTTTGATTTTTTTT+AGG - chr3_1:66148892-66148911 Msa0369030:intron 15.0%
!!! AGTGATTTTGATTTTTTTTA+GGG - chr3_1:66148893-66148912 Msa0369030:intron 15.0%
!!! TTTTTTTTTTATAGAGTGAA+TGG - chr3_1:66149244-66149263 Msa0369030:intron 15.0%
!!! TTTTTTTTTATAGAGTGAAT+GGG - chr3_1:66149245-66149264 Msa0369030:intron 15.0%
!! AAAAAAAAAAAAGATGCATA+AGG - chr3_1:66150533-66150552 Msa0369030:intron 15.0%
!!! ATGCATTTTTTAACTTTAAA+GGG + chr3_1:66151582-66151601 None:intergenic 15.0%
!!! TGCTTTTATATATTATGAAT+GGG + chr3_1:66151946-66151965 None:intergenic 15.0%
!!! ATGCTTTTATATATTATGAA+TGG + chr3_1:66151947-66151966 None:intergenic 15.0%
!! GTAAAAAAGAAAAAAATGAA+GGG + chr3_1:66152004-66152023 None:intergenic 15.0%
!! TTGTAAAGTTTATATAACAA+AGG - chr3_1:66152702-66152721 Msa0369030:intron 15.0%
!! AAAATTTATATATCAAAGGA+AGG + chr3_1:66153208-66153227 None:intergenic 15.0%
!!! AATTTTAAAATCACAATATG+AGG - chr3_1:66153222-66153241 Msa0369030:intron 15.0%
!!! GTTATTTTCAAATATTTCAA+AGG + chr3_1:66153647-66153666 None:intergenic 15.0%
!! TAATTACATATCAACAAAAA+GGG + chr3_1:66154771-66154790 None:intergenic 15.0%
!! TTAATTACATATCAACAAAA+AGG + chr3_1:66154772-66154791 None:intergenic 15.0%
!! GAATGTTTACAATCAAAAAA+TGG - chr3_1:66147348-66147367 Msa0369030:CDS 20.0%
!! TCAAAAAATGGAAAATGAAA+AGG - chr3_1:66147360-66147379 Msa0369030:CDS 20.0%
!! AAAAAAACAATAAATTCACC+TGG + chr3_1:66147529-66147548 None:intergenic 20.0%
!! AAAGACATTAAAAACTAAAG+GGG - chr3_1:66147670-66147689 Msa0369030:intron 20.0%
!!! TTTTAAAGTTATTATGAGTG+CGG - chr3_1:66148264-66148283 Msa0369030:intron 20.0%
!!! ACTTATGCTTTCTTATTTTT+TGG - chr3_1:66148339-66148358 Msa0369030:intron 20.0%
!! AGAGATTTATTAGTATTTGA+TGG + chr3_1:66149357-66149376 None:intergenic 20.0%
!! TTACAAACAAAATTTCATGT+TGG - chr3_1:66149738-66149757 Msa0369030:intron 20.0%
!!! TGTGGTATACATATTTTATA+AGG - chr3_1:66149796-66149815 Msa0369030:intron 20.0%
!! AACTGAAATTTAGATAAGTT+CGG + chr3_1:66149869-66149888 None:intergenic 20.0%
!! TATATATATTATCAAGTGAG+AGG - chr3_1:66149897-66149916 Msa0369030:intron 20.0%
!!! AACCAATTATCTTTTAATTG+CGG + chr3_1:66150443-66150462 None:intergenic 20.0%
!! CAATTAAAAGATAATTGGTT+GGG - chr3_1:66150443-66150462 Msa0369030:intron 20.0%
!!! TAGTGTTTTAAATAGCTTTT+CGG + chr3_1:66150885-66150904 None:intergenic 20.0%
!!! TATTTAAAACACTACTAAGA+AGG - chr3_1:66150891-66150910 Msa0369030:intron 20.0%
!!! ATTTAAAACACTACTAAGAA+GGG - chr3_1:66150892-66150911 Msa0369030:intron 20.0%
!!! TGATATCATAACCATTTTTA+TGG + chr3_1:66150980-66150999 None:intergenic 20.0%
!!! TGCATTTTTTAACTTTAAAG+GGG + chr3_1:66151581-66151600 None:intergenic 20.0%
!!! CATGCATTTTTTAACTTTAA+AGG + chr3_1:66151583-66151602 None:intergenic 20.0%
!!! CTTTAAAGTTAAAAAATGCA+TGG - chr3_1:66151581-66151600 Msa0369030:intron 20.0%
!! TATATATTATGAATGGGAAT+TGG + chr3_1:66151940-66151959 None:intergenic 20.0%
!! CGTAAAAAAGAAAAAAATGA+AGG + chr3_1:66152005-66152024 None:intergenic 20.0%
!! TTTCAATCAAAATATCACAA+GGG + chr3_1:66152187-66152206 None:intergenic 20.0%
!! ATTTCAATCAAAATATCACA+AGG + chr3_1:66152188-66152207 None:intergenic 20.0%
!! CAAATATTCAAAAACATCTT+TGG + chr3_1:66152431-66152450 None:intergenic 20.0%
!! CTTATCATAAAAAATAACCT+TGG + chr3_1:66152653-66152672 None:intergenic 20.0%
!!! CAAGGTTATTTTTTATGATA+AGG - chr3_1:66152651-66152670 Msa0369030:intron 20.0%
!! AAAGTTTATATAACAAAGGA+AGG - chr3_1:66152706-66152725 Msa0369030:intron 20.0%
!!! GGTGTAATTTTTTTATGATA+AGG + chr3_1:66153263-66153282 None:intergenic 20.0%
!!! ACTATTTCAGCAATTTTTTT+TGG - chr3_1:66153875-66153894 Msa0369030:intron 20.0%
!! TCAGCATAATAAAAAAAACT+TGG + chr3_1:66153947-66153966 None:intergenic 20.0%
!!! GTAGAACAAAAACATAATTT+TGG + chr3_1:66154292-66154311 None:intergenic 20.0%
!!! AACTAAAAGTACCTTTTAAA+TGG + chr3_1:66154957-66154976 None:intergenic 20.0%
!! AAATGCATAAAATTGAAGAT+TGG + chr3_1:66155010-66155029 None:intergenic 20.0%
!! AGTAATTAGATTTACTCATT+CGG + chr3_1:66155045-66155064 None:intergenic 20.0%
!! ATATATCTTATTCTGAATGT+AGG - chr3_1:66155134-66155153 Msa0369030:intron 20.0%
! AAATGAAAAGGTCAAATTTC+CGG - chr3_1:66147372-66147391 Msa0369030:CDS 25.0%
! TTGATTTATAAGCTCTTCAT+CGG + chr3_1:66147419-66147438 None:intergenic 25.0%
! AACCAGAAAGAAAAACAATT+TGG - chr3_1:66147991-66148010 Msa0369030:intron 25.0%
!!! TTCCAAATTGTTTTTCTTTC+TGG + chr3_1:66147996-66148015 None:intergenic 25.0%
! GAAAGAAAAACAATTTGGAA+TGG - chr3_1:66147996-66148015 Msa0369030:intron 25.0%
! TCTAATGTATGTATGTCTTT+CGG - chr3_1:66148303-66148322 Msa0369030:intron 25.0%
!! AAAGACAAAGAGATTTTCAA+GGG - chr3_1:66148487-66148506 Msa0369030:intron 25.0%
! AATTGGGATGAAAAAAACAT+TGG - chr3_1:66148519-66148538 Msa0369030:intron 25.0%
!!! AAAACATTGGTTTTCTACAA+AGG - chr3_1:66148532-66148551 Msa0369030:intron 25.0%
! TAAGTTTGACAATAATGACA+CGG + chr3_1:66148822-66148841 None:intergenic 25.0%
! TGATTTCTCTTCAAAACAAA+TGG - chr3_1:66149416-66149435 Msa0369030:intron 25.0%
!! TAAACCAAGAGTTTTCTTTT+GGG - chr3_1:66149589-66149608 Msa0369030:intron 25.0%
! CATTTATCTATTGTGATTTG+TGG - chr3_1:66149778-66149797 Msa0369030:intron 25.0%
!!! TAGATTCATGAATTTGGTTT+TGG + chr3_1:66150302-66150321 None:intergenic 25.0%
!! TTGCTTTAGATTCATGAATT+TGG + chr3_1:66150308-66150327 None:intergenic 25.0%
!!! ACCAATTATCTTTTAATTGC+GGG + chr3_1:66150442-66150461 None:intergenic 25.0%
! GCAATTAAAAGATAATTGGT+TGG - chr3_1:66150442-66150461 Msa0369030:intron 25.0%
! AAGCTAATATGTTTAGATCA+TGG + chr3_1:66150477-66150496 None:intergenic 25.0%
! ATAATAGATGTCTTGTCTTA+AGG - chr3_1:66150642-66150661 Msa0369030:intron 25.0%
! TGAAAATAGATAGCTATCAA+TGG + chr3_1:66150956-66150975 None:intergenic 25.0%
!! TCTATTTTCAGCCATAAAAA+TGG - chr3_1:66150966-66150985 Msa0369030:intron 25.0%
! ATACAACAAAAATCATCAAG+AGG + chr3_1:66151100-66151119 None:intergenic 25.0%
! ATGGAAAAAAAATCATCAAG+AGG + chr3_1:66151129-66151148 None:intergenic 25.0%
! TACAATTAAAACTGCCAAAA+CGG - chr3_1:66151415-66151434 Msa0369030:intron 25.0%
! CACTTGAAGTAAATAATACA+CGG - chr3_1:66151511-66151530 Msa0369030:intron 25.0%
! GAAAATGAATGACATCAAAT+CGG - chr3_1:66151673-66151692 Msa0369030:intron 25.0%
!!! GTTGATTTTAAGAGAAATAG+TGG - chr3_1:66151832-66151851 Msa0369030:intron 25.0%
! GAATTGAAAGCAATGATAAT+TGG - chr3_1:66151889-66151908 Msa0369030:intron 25.0%
! AAAGAAAAAAATGAAGGGAA+AGG + chr3_1:66151999-66152018 None:intergenic 25.0%
! ATGATTGGACAAATAGTATT+CGG + chr3_1:66152103-66152122 None:intergenic 25.0%
!! CAAAAGTCATTCACAAATTT+TGG - chr3_1:66152225-66152244 Msa0369030:intron 25.0%
!! TTGAATCTTTGAGAAAAAAC+AGG + chr3_1:66152352-66152371 None:intergenic 25.0%
! AATTGTCTTATCAGGTAAAA+TGG + chr3_1:66152396-66152415 None:intergenic 25.0%
! CTGACAAAAAATCAATATGT+TGG + chr3_1:66152482-66152501 None:intergenic 25.0%
!!! CAACATATTGATTTTTTGTC+AGG - chr3_1:66152480-66152499 Msa0369030:intron 25.0%
!!! AAAGGAGGTAAGTTTTTTTA+TGG - chr3_1:66152741-66152760 Msa0369030:intron 25.0%
!!! AAGGAGGTAAGTTTTTTTAT+GGG - chr3_1:66152742-66152761 Msa0369030:intron 25.0%
! GTGCTATAACTTAAATAATG+AGG + chr3_1:66152939-66152958 None:intergenic 25.0%
!! TTCAAATCAATCCATTCTTT+TGG - chr3_1:66152989-66153008 Msa0369030:intron 25.0%
!!! ATGTCTTACAATTTTGAGAA+TGG + chr3_1:66153037-66153056 None:intergenic 25.0%
! GCAAATGTTTATTTCATCTT+AGG + chr3_1:66153109-66153128 None:intergenic 25.0%
!!! ATATATCAAAGGAAGGTATT+TGG + chr3_1:66153201-66153220 None:intergenic 25.0%
! AATGTTGCCATAGAATATTT+GGG - chr3_1:66153553-66153572 Msa0369030:intron 25.0%
! ATAAAGCCATTCATAAACTT+AGG + chr3_1:66153681-66153700 None:intergenic 25.0%
! CTATTTAATGTTCTCATGTA+TGG - chr3_1:66154014-66154033 Msa0369030:intron 25.0%
! TACAATGTCAAACTCAATAA+AGG - chr3_1:66154135-66154154 Msa0369030:CDS 25.0%
! ACAATGTCAAACTCAATAAA+GGG - chr3_1:66154136-66154155 Msa0369030:CDS 25.0%
!! TTTTACTTGGAAGTTTTTCA+AGG - chr3_1:66154345-66154364 Msa0369030:intron 25.0%
!! TATCTAGTCCTGTAATTTTA+AGG + chr3_1:66154374-66154393 None:intergenic 25.0%
! AAAAAAAGTTAACTTTGAGC+AGG - chr3_1:66154663-66154682 Msa0369030:intron 25.0%
!! TTTTAGTAGAAACCAACATT+TGG + chr3_1:66154736-66154755 None:intergenic 25.0%
! ATATCAACAAAAAGGGAAAA+GGG + chr3_1:66154764-66154783 None:intergenic 25.0%
! AAATTTGTATGATCCTCAAA+AGG - chr3_1:66154914-66154933 Msa0369030:intron 25.0%
! GTAATTAGATTTACTCATTC+GGG + chr3_1:66155044-66155063 None:intergenic 25.0%
AAATCAATACCTTGTCAAGA+AGG - chr3_1:66147432-66147451 Msa0369030:CDS 30.0%
ATATGAATAAGTGTGAACCA+TGG - chr3_1:66147497-66147516 Msa0369030:CDS 30.0%
TATGAATAAGTGTGAACCAT+GGG - chr3_1:66147498-66147517 Msa0369030:CDS 30.0%
ATGCAGTGTTTATTTGATTC+AGG + chr3_1:66147846-66147865 None:intergenic 30.0%
TAAACTAAGTCTTCTTTGGT+AGG + chr3_1:66147953-66147972 None:intergenic 30.0%
CACATAAACTAAGTCTTCTT+TGG + chr3_1:66147957-66147976 None:intergenic 30.0%
CAAAGAAGACTTAGTTTATG+TGG - chr3_1:66147955-66147974 Msa0369030:intron 30.0%
CTAAGGTGTAATTAAACCAT+TGG + chr3_1:66148120-66148139 None:intergenic 30.0%
AGATAACGACAATATCTCTA+AGG + chr3_1:66148137-66148156 None:intergenic 30.0%
TTGTCGTTATCTTACTTTGA+TGG - chr3_1:66148145-66148164 Msa0369030:intron 30.0%
!!! TTTTTTGGTTTATTCAGAGC+TGG - chr3_1:66148354-66148373 Msa0369030:intron 30.0%
CTAAAATGGGAGAAACAAAA+TGG - chr3_1:66148377-66148396 Msa0369030:intron 30.0%
!!! AATGGTATTTTTTCTGTGTG+AGG - chr3_1:66148395-66148414 Msa0369030:intron 30.0%
!!! ATGGTATTTTTTCTGTGTGA+GGG - chr3_1:66148396-66148415 Msa0369030:intron 30.0%
! CAAAGACAAAGAGATTTTCA+AGG - chr3_1:66148486-66148505 Msa0369030:intron 30.0%
TTCAAGGGAAATGCATTAAT+TGG - chr3_1:66148502-66148521 Msa0369030:intron 30.0%
TCAAGGGAAATGCATTAATT+GGG - chr3_1:66148503-66148522 Msa0369030:intron 30.0%
AGGTAATTCTATCAAACACA+TGG + chr3_1:66148747-66148766 None:intergenic 30.0%
!! ACAACTTTTAGAGAAACTAC+TGG - chr3_1:66149045-66149064 Msa0369030:intron 30.0%
! GTCTTTAAGAAGGATAATTG+TGG - chr3_1:66149279-66149298 Msa0369030:intron 30.0%
GGATAATTGTGGAAAGAAAA+TGG - chr3_1:66149290-66149309 Msa0369030:intron 30.0%
AATTGTGGAAAGAAAATGGA+TGG - chr3_1:66149294-66149313 Msa0369030:intron 30.0%
AAAATGGATGGTTCAAAACA+TGG - chr3_1:66149306-66149325 Msa0369030:intron 30.0%
!!! GTTTGGTTTTCACTATTGTA+TGG + chr3_1:66149387-66149406 None:intergenic 30.0%
CAAAAGAAAACTCTTGGTTT+AGG + chr3_1:66149590-66149609 None:intergenic 30.0%
! CTAAACCAAGAGTTTTCTTT+TGG - chr3_1:66149588-66149607 Msa0369030:intron 30.0%
ATCCATTGGATCAAAATACA+CGG + chr3_1:66149950-66149969 None:intergenic 30.0%
TGAGTTTCAGTTATATCCAT+TGG + chr3_1:66149964-66149983 None:intergenic 30.0%
ATGGATATAACTGAAACTCA+TGG - chr3_1:66149964-66149983 Msa0369030:intron 30.0%
TCGAAAAAGGTTGCAAAATT+AGG + chr3_1:66150064-66150083 None:intergenic 30.0%
!! TAATTTTGCAACCTTTTTCG+AGG - chr3_1:66150063-66150082 Msa0369030:intron 30.0%
! TTTTTCATCTTCCTCGAAAA+AGG + chr3_1:66150077-66150096 None:intergenic 30.0%
GGAAGATGAAAAATCAACTA+TGG - chr3_1:66150084-66150103 Msa0369030:intron 30.0%
AAATCAACTATGGAACACAT+TGG - chr3_1:66150094-66150113 Msa0369030:intron 30.0%
ATGTTTGTATCGAGTTTAGT+GGG + chr3_1:66150222-66150241 None:intergenic 30.0%
GTTTCTGTGATAGATTATGT+TGG - chr3_1:66150260-66150279 Msa0369030:intron 30.0%
ACCCGCAATTAAAAGATAAT+TGG - chr3_1:66150438-66150457 Msa0369030:intron 30.0%
! CTAAACATATTAGCTTCCTA+AGG - chr3_1:66150481-66150500 Msa0369030:intron 30.0%
! ATCTATTATTTTCCCCTTGA+AGG + chr3_1:66150631-66150650 None:intergenic 30.0%
ATTGCAACACTTCAATGAAA+CGG - chr3_1:66151035-66151054 Msa0369030:intron 30.0%
TGCTAACATTGGATCTAAAT+TGG - chr3_1:66151344-66151363 Msa0369030:intron 30.0%
TAACATTGGATCTAAATTGG+TGG - chr3_1:66151347-66151366 Msa0369030:intron 30.0%
ATCTAAATTGGTGGAAAACA+TGG - chr3_1:66151356-66151375 Msa0369030:intron 30.0%
CATTATCGTAACAGAAAACA+GGG - chr3_1:66151476-66151495 Msa0369030:intron 30.0%
ATGGCTATATATTGAATGAG+TGG - chr3_1:66151600-66151619 Msa0369030:intron 30.0%
TATCCATTGTGATAAGAAAG+TGG - chr3_1:66151645-66151664 Msa0369030:intron 30.0%
TCTTAAAATCAACGAGTACT+TGG + chr3_1:66151825-66151844 None:intergenic 30.0%
TTGAAAGCAATGATAATTGG+AGG - chr3_1:66151892-66151911 Msa0369030:intron 30.0%
TGATTGGACAAATAGTATTC+GGG + chr3_1:66152102-66152121 None:intergenic 30.0%
TTTGCTTACAAAGACAACAA+TGG - chr3_1:66152154-66152173 Msa0369030:intron 30.0%
! TACCTGATAAGACAATTTTC+TGG - chr3_1:66152399-66152418 Msa0369030:intron 30.0%
! ACCTGATAAGACAATTTTCT+GGG - chr3_1:66152400-66152419 Msa0369030:intron 30.0%
!! AGTTGACTTGACATTAGAAT+TGG + chr3_1:66152568-66152587 None:intergenic 30.0%
CACATTCAAGGATAACTTTA+AGG + chr3_1:66152615-66152634 None:intergenic 30.0%
! ATGATAAGGCATATGAGTTT+TGG - chr3_1:66152665-66152684 Msa0369030:intron 30.0%
!! AACAAAGGAAGGTATTTGAA+AGG - chr3_1:66152717-66152736 Msa0369030:intron 30.0%
!!! AGGAGGTAAGTTTTTTTATG+GGG - chr3_1:66152743-66152762 Msa0369030:intron 30.0%
!!! TAAGTTTTTTTATGGGGAGT+AGG - chr3_1:66152749-66152768 Msa0369030:intron 30.0%
! AGCATGTCAATCTTTTACAA+TGG - chr3_1:66152784-66152803 Msa0369030:intron 30.0%
!!! CTTAGGTTGATTTTCTTACT+TGG + chr3_1:66153092-66153111 None:intergenic 30.0%
GAATGCAATGACAAGTAAAA+CGG + chr3_1:66153289-66153308 None:intergenic 30.0%
TTTACTTGTCATTGCATTCA+AGG - chr3_1:66153290-66153309 Msa0369030:intron 30.0%
CTTGAATACTTGGCTAAATA+AGG + chr3_1:66153476-66153495 None:intergenic 30.0%
CAAAGATGTTCTTGAATACT+TGG + chr3_1:66153486-66153505 None:intergenic 30.0%
CAAGTATTCAAGAACATCTT+TGG - chr3_1:66153484-66153503 Msa0369030:intron 30.0%
CCTGAAGAAGATAATTCTTT+GGG + chr3_1:66153515-66153534 None:intergenic 30.0%
ACCTGAAGAAGATAATTCTT+TGG + chr3_1:66153516-66153535 None:intergenic 30.0%
CAATGTTGCCATAGAATATT+TGG - chr3_1:66153552-66153571 Msa0369030:intron 30.0%
ACTAGTCCTAAGTTTATGAA+TGG - chr3_1:66153672-66153691 Msa0369030:intron 30.0%
!! TATGAATGGCTTTATAGAGT+TGG - chr3_1:66153686-66153705 Msa0369030:intron 30.0%
TTATGCTGAATATAGTTTCC+TGG - chr3_1:66153958-66153977 Msa0369030:intron 30.0%
! AGTATTATTTCTTATGAGCC+AGG + chr3_1:66153979-66153998 None:intergenic 30.0%
!!! TATTGGTTTGGTTCCTTTTT+TGG - chr3_1:66154080-66154099 Msa0369030:CDS 30.0%
!!! ATTGGTTTGGTTCCTTTTTT+GGG - chr3_1:66154081-66154100 Msa0369030:CDS 30.0%
AATAAAGGGTAGAATTGTTC+AGG - chr3_1:66154150-66154169 Msa0369030:CDS 30.0%
! CACTCTTTTATTAGTACGAA+TGG + chr3_1:66154201-66154220 None:intergenic 30.0%
! AATAAAAGAGTGCAAGTTGA+TGG - chr3_1:66154209-66154228 Msa0369030:CDS 30.0%
! ATCAGTAGATTTTCAGCTAT+AGG - chr3_1:66154416-66154435 Msa0369030:intron 30.0%
CATATCAACAAAAAGGGAAA+AGG + chr3_1:66154765-66154784 None:intergenic 30.0%
AACAAATTAACATTCATCGC+AGG + chr3_1:66154857-66154876 None:intergenic 30.0%
!!! TTAGTTCTGTTTTACTCCTA+TGG - chr3_1:66154971-66154990 Msa0369030:intron 30.0%
! TATAAATCTGCAGTTTTGCA+CGG - chr3_1:66155064-66155083 Msa0369030:intron 30.0%
GAACACTTGAAACATGATTT+GGG + chr3_1:66155183-66155202 None:intergenic 30.0%
TGAACACTTGAAACATGATT+TGG + chr3_1:66155184-66155203 None:intergenic 30.0%
GCATAATTTGATGGAGTTAT+AGG + chr3_1:66155219-66155238 None:intergenic 30.0%
TTTATAAGCTCTTCATCGGT+CGG + chr3_1:66147415-66147434 None:intergenic 35.0%
CCAGATCTAATCAATGACTT+TGG + chr3_1:66147799-66147818 None:intergenic 35.0%
! CCAAAGTCATTGATTAGATC+TGG - chr3_1:66147796-66147815 Msa0369030:intron 35.0%
CAAACAATGTCGTACTAAGA+CGG - chr3_1:66147913-66147932 Msa0369030:intron 35.0%
!! ACAATTTGGAATGGTGCTTT+TGG - chr3_1:66148005-66148024 Msa0369030:intron 35.0%
!! CAATTTGGAATGGTGCTTTT+GGG - chr3_1:66148006-66148025 Msa0369030:intron 35.0%
TGGTGGAAAAAGAAGAAAAG+TGG - chr3_1:66148065-66148084 Msa0369030:intron 35.0%
CACATTTATTAGTGTCGTGT+TGG + chr3_1:66148223-66148242 None:intergenic 35.0%
CAACACGACACTAATAAATG+TGG - chr3_1:66148221-66148240 Msa0369030:intron 35.0%
TTATTCAGAGCTGGCTAAAA+TGG - chr3_1:66148363-66148382 Msa0369030:intron 35.0%
TATTCAGAGCTGGCTAAAAT+GGG - chr3_1:66148364-66148383 Msa0369030:intron 35.0%
!!! CAATTGGTTTTTTCACCACT+CGG + chr3_1:66148565-66148584 None:intergenic 35.0%
GAGTGGTGAAAAAACCAATT+GGG - chr3_1:66148564-66148583 Msa0369030:intron 35.0%
CAATATTACCATTCCATGTG+TGG + chr3_1:66148641-66148660 None:intergenic 35.0%
GTCAAAATTACGGTAACACA+AGG + chr3_1:66148767-66148786 None:intergenic 35.0%
! TCTCAGTAGAGTCTTTAAGA+AGG - chr3_1:66149269-66149288 Msa0369030:intron 35.0%
! TGGTTTTCACTATTGTATGG+AGG + chr3_1:66149384-66149403 None:intergenic 35.0%
AGAAATCAGAAAGAGTGGTT+TGG + chr3_1:66149404-66149423 None:intergenic 35.0%
TGAAGAGAAATCAGAAAGAG+TGG + chr3_1:66149409-66149428 None:intergenic 35.0%
GCAGTTATTACTTCAGCTAA+AGG + chr3_1:66149450-66149469 None:intergenic 35.0%
TTAGCTGAAGTAATAACTGC+TGG - chr3_1:66149450-66149469 Msa0369030:intron 35.0%
AAAACTCTTGGTTTAGGCTT+TGG + chr3_1:66149584-66149603 None:intergenic 35.0%
GATATCTCATCTGTGGTATA+TGG - chr3_1:66149627-66149646 Msa0369030:intron 35.0%
TCATCTGTGGTATATGGAAA+TGG - chr3_1:66149633-66149652 Msa0369030:intron 35.0%
ATGGAAATGGCATGTTTCAA+AGG - chr3_1:66149646-66149665 Msa0369030:intron 35.0%
ATGTTGCTCCTGTCAATAAA+GGG + chr3_1:66150180-66150199 None:intergenic 35.0%
AATGTTGCTCCTGTCAATAA+AGG + chr3_1:66150181-66150200 None:intergenic 35.0%
CATGTTTGTATCGAGTTTAG+TGG + chr3_1:66150223-66150242 None:intergenic 35.0%
CACTAAACTCGATACAAACA+TGG - chr3_1:66150221-66150240 Msa0369030:intron 35.0%
GATACAAACATGGATAGACA+TGG - chr3_1:66150231-66150250 Msa0369030:intron 35.0%
!!! GAATTTGGTTTTGGTAACCT+TGG + chr3_1:66150293-66150312 None:intergenic 35.0%
!!! GTTAGCTTTTGTGATGTCAA+AGG + chr3_1:66150717-66150736 None:intergenic 35.0%
! CCTTGACTAGAGGAATTTTA+TGG + chr3_1:66150792-66150811 None:intergenic 35.0%
CCATAAAATTCCTCTAGTCA+AGG - chr3_1:66150789-66150808 Msa0369030:intron 35.0%
GTTTAAGCTAGCTGATAAGT+GGG - chr3_1:66150918-66150937 Msa0369030:intron 35.0%
TGATAAGTGGGTGACATAAA+TGG - chr3_1:66150930-66150949 Msa0369030:intron 35.0%
TCTTCTAAATCATGTGCGTT+TGG + chr3_1:66151007-66151026 None:intergenic 35.0%
ACACTTCAATGAAACGGAAA+TGG - chr3_1:66151041-66151060 Msa0369030:intron 35.0%
ATGAAACGGAAATGGAAACT+TGG - chr3_1:66151049-66151068 Msa0369030:intron 35.0%
AGCATTGCTATATCAAGTGA+AGG - chr3_1:66151170-66151189 Msa0369030:intron 35.0%
AAATTGGTGGAAAACATGGA+TGG - chr3_1:66151360-66151379 Msa0369030:intron 35.0%
GCATTATCGTAACAGAAAAC+AGG - chr3_1:66151475-66151494 Msa0369030:intron 35.0%
GAACCACTTTCTTATCACAA+TGG + chr3_1:66151651-66151670 None:intergenic 35.0%
GTCAATCAAGACTTGATCAA+TGG - chr3_1:66151785-66151804 Msa0369030:intron 35.0%
TAGTCTTTGAATGACACTAG+TGG + chr3_1:66152031-66152050 None:intergenic 35.0%
GCTGTTTAGAAGAGAATGAT+TGG + chr3_1:66152118-66152137 None:intergenic 35.0%
! ATGACTTTTGCTGCTAAACA+AGG + chr3_1:66152215-66152234 None:intergenic 35.0%
GCTCAAGATGCATTGTTAAA+AGG - chr3_1:66152304-66152323 Msa0369030:intron 35.0%
ACCCAGAAAATTGTCTTATC+AGG + chr3_1:66152404-66152423 None:intergenic 35.0%
TATCCTTGAATGTGATGACA+AGG - chr3_1:66152621-66152640 Msa0369030:intron 35.0%
TTTCCTTGTCATCACATTCA+AGG + chr3_1:66152627-66152646 None:intergenic 35.0%
AACTTTACAATCACCACATG+CGG + chr3_1:66152692-66152711 None:intergenic 35.0%
!! GGAAGGTATTTGAAAGGTAA+AGG - chr3_1:66152723-66152742 Msa0369030:intron 35.0%
AGGTATTTGAAAGGTAAAGG+AGG - chr3_1:66152726-66152745 Msa0369030:intron 35.0%
ATAGAACAGCAAGAATGTTG+AGG - chr3_1:66152889-66152908 Msa0369030:intron 35.0%
TAGAACAGCAAGAATGTTGA+GGG - chr3_1:66152890-66152909 Msa0369030:intron 35.0%
TAAATAATGAGGACCCCTTA+TGG + chr3_1:66152928-66152947 None:intergenic 35.0%
TGGAACAACAAAAATGACGA+GGG + chr3_1:66153017-66153036 None:intergenic 35.0%
ATGGAACAACAAAAATGACG+AGG + chr3_1:66153018-66153037 None:intergenic 35.0%
! AAGGAGGAAAGTCTTTTTAC+CGG + chr3_1:66153172-66153191 None:intergenic 35.0%
!! ATCAAAGGAAGGTATTTGGA+AGG + chr3_1:66153197-66153216 None:intergenic 35.0%
TTCATATGTTGCAGTTGATC+CGG - chr3_1:66153337-66153356 Msa0369030:intron 35.0%
AGTTGATCCGGTATTGTAAT+TGG - chr3_1:66153349-66153368 Msa0369030:intron 35.0%
TTGAGTGCCAATTACAATAC+CGG + chr3_1:66153359-66153378 None:intergenic 35.0%
! GCACTCAAGTTTTTGTTGAT+GGG - chr3_1:66153371-66153390 Msa0369030:intron 35.0%
! CCAACAGATTGATTCTTTGT+TGG + chr3_1:66153436-66153455 None:intergenic 35.0%
CCAACAAAGAATCAATCTGT+TGG - chr3_1:66153433-66153452 Msa0369030:intron 35.0%
CCCAAAGAATTATCTTCTTC+AGG - chr3_1:66153512-66153531 Msa0369030:intron 35.0%
ATTCTATGGCAACATTGCTA+AGG + chr3_1:66153549-66153568 None:intergenic 35.0%
GCTCTTTCCCAAATATTCTA+TGG + chr3_1:66153563-66153582 None:intergenic 35.0%
TAGAATATTTGGGAAAGAGC+AGG - chr3_1:66153563-66153582 Msa0369030:intron 35.0%
TTATAGAGTTGGATGCAAAG+AGG - chr3_1:66153697-66153716 Msa0369030:intron 35.0%
TATAGAGTTGGATGCAAAGA+GGG - chr3_1:66153698-66153717 Msa0369030:intron 35.0%
ATCATCACATGATGAAGACA+TGG - chr3_1:66153750-66153769 Msa0369030:intron 35.0%
AGAAGCTTGACAACAATGAA+AGG - chr3_1:66153776-66153795 Msa0369030:intron 35.0%
TAGCACACTAAATACAAGCT+CGG + chr3_1:66153806-66153825 None:intergenic 35.0%
CATCGTTAATTATGTGACCA+GGG - chr3_1:66154242-66154261 Msa0369030:CDS 35.0%
!! CTAGTCCTGTAATTTTAAGG+AGG + chr3_1:66154371-66154390 None:intergenic 35.0%
TTAGAGTAAGTACGTGGATT+AGG - chr3_1:66154445-66154464 Msa0369030:intron 35.0%
!!! GTTGTTTTTTTAGCCTGCTT+AGG - chr3_1:66154525-66154544 Msa0369030:intron 35.0%
!! TTTTTAGCCTGCTTAGGTTT+TGG - chr3_1:66154531-66154550 Msa0369030:intron 35.0%
!! TTTGGTGTTCCGTATATATG+CGG - chr3_1:66154549-66154568 Msa0369030:intron 35.0%
TGGAAGCAACAATAAACCAT+AGG + chr3_1:66154990-66155009 None:intergenic 35.0%
!! AACCAAGACATTCTAGTTCA+GGG + chr3_1:66155093-66155112 None:intergenic 35.0%
!! AAACCAAGACATTCTAGTTC+AGG + chr3_1:66155094-66155113 None:intergenic 35.0%
! CTTGAAACATGATTTGGGAT+AGG + chr3_1:66155178-66155197 None:intergenic 35.0%
! TCATGTTTCAAGTGTTCACA+CGG - chr3_1:66155186-66155205 Msa0369030:intron 35.0%
TGTCATCAACCTTCTTGACA+AGG + chr3_1:66147444-66147463 None:intergenic 40.0%
TGTTACAGATCTCTAGGCAT+CGG + chr3_1:66147767-66147786 None:intergenic 40.0%
CATCGATGTTACAGATCTCT+AGG + chr3_1:66147773-66147792 None:intergenic 40.0%
! GTCATTGATTAGATCTGGAC+TGG - chr3_1:66147801-66147820 Msa0369030:intron 40.0%
TAACCCTAAAACACCCTCAT+TGG - chr3_1:66148036-66148055 Msa0369030:intron 40.0%
!!! CTACCAATGAGGGTGTTTTA+GGG + chr3_1:66148042-66148061 None:intergenic 40.0%
!!! TCTACCAATGAGGGTGTTTT+AGG + chr3_1:66148043-66148062 None:intergenic 40.0%
! AAGAAAAGTGGTGACGACTA+GGG - chr3_1:66148077-66148096 Msa0369030:intron 40.0%
! TTATTAGTGTCGTGTTGGTG+CGG + chr3_1:66148218-66148237 None:intergenic 40.0%
! TAGTAGCTCTATTGGTCCTT+TGG + chr3_1:66148441-66148460 None:intergenic 40.0%
ACCAATAGAGCTACTAATGC+TGG - chr3_1:66148445-66148464 Msa0369030:intron 40.0%
CGAGTGGTGAAAAAACCAAT+TGG - chr3_1:66148563-66148582 Msa0369030:intron 40.0%
GTATTCATGCATGACCCAAT+TGG + chr3_1:66148581-66148600 None:intergenic 40.0%
TTACCATTCCATGTGTGGAT+AGG + chr3_1:66148636-66148655 None:intergenic 40.0%
ACAGATCCTCGATGAATGTT+TGG + chr3_1:66148853-66148872 None:intergenic 40.0%
TGGATGGTTCAAAACATGGA+AGG - chr3_1:66149310-66149329 Msa0369030:intron 40.0%
! AGGTTTAACTCCTCTAGAGA+AGG - chr3_1:66149330-66149349 Msa0369030:intron 40.0%
! ATTTGATGGTCCTTCTCTAG+AGG + chr3_1:66149343-66149362 None:intergenic 40.0%
TTGAACCAAACCTCAATGGT+CGG - chr3_1:66149474-66149493 Msa0369030:intron 40.0%
CTCAAGAACAATCACTGTTG+AGG - chr3_1:66149520-66149539 Msa0369030:intron 40.0%
CAGTTGGAGAATGAGAATCT+TGG - chr3_1:66149546-66149565 Msa0369030:intron 40.0%
!! TTGGTTTAGGCTTTGGTTTG+AGG + chr3_1:66149577-66149596 None:intergenic 40.0%
CTCTCCCAAAAGAAAACTCT+TGG + chr3_1:66149596-66149615 None:intergenic 40.0%
TGATGCTGATATCTCATCTG+TGG - chr3_1:66149620-66149639 Msa0369030:intron 40.0%
GAAATGGCATGTTTCAAAGG+TGG - chr3_1:66149649-66149668 Msa0369030:intron 40.0%
CAAGAATTGTCATCAGCTTC+AGG - chr3_1:66149681-66149700 Msa0369030:intron 40.0%
ATGTGGTCAATGATAGCTTG+TGG - chr3_1:66149706-66149725 Msa0369030:intron 40.0%
!!! GACCGTGTATTTTGATCCAA+TGG - chr3_1:66149945-66149964 Msa0369030:intron 40.0%
CTGTCAACTTTCTCAGGATA+TGG + chr3_1:66150010-66150029 None:intergenic 40.0%
TCCTGAGAAAGTTGACAGAT+TGG - chr3_1:66150012-66150031 Msa0369030:intron 40.0%
ACCAATCTGTCAACTTTCTC+AGG + chr3_1:66150016-66150035 None:intergenic 40.0%
! TTAGGAGTCTTGTAACCTCT+AGG + chr3_1:66150046-66150065 None:intergenic 40.0%
CAGTTGTTCCCTTTATTGAC+AGG - chr3_1:66150169-66150188 Msa0369030:intron 40.0%
!! ATTATGTTGGCTTCAGTCCA+AGG - chr3_1:66150273-66150292 Msa0369030:intron 40.0%
!! TAGTTGCTGACTTCCTTAAG+AGG - chr3_1:66150340-66150359 Msa0369030:intron 40.0%
GATGGTTTCTGAACCTCTTA+AGG + chr3_1:66150356-66150375 None:intergenic 40.0%
AAGAGGTTCAGAAACCATCT+AGG - chr3_1:66150357-66150376 Msa0369030:intron 40.0%
ATGCCTAGTCCAATTTCATG+AGG - chr3_1:66150382-66150401 Msa0369030:intron 40.0%
CATATCCAGCCTCATGAAAT+TGG + chr3_1:66150394-66150413 None:intergenic 40.0%
TTTCTCTATGTGTGCTCCTT+AGG + chr3_1:66150500-66150519 None:intergenic 40.0%
TAGAACGTCTTCCATTGGAT+CGG + chr3_1:66150597-66150616 None:intergenic 40.0%
TTGTCTTAAGGTCAACCGAA+AGG - chr3_1:66150654-66150673 Msa0369030:intron 40.0%
TGAGCTTGTGTTCTTCCTTT+CGG + chr3_1:66150672-66150691 None:intergenic 40.0%
! CTTTTGATCTCCTTGACTAG+AGG + chr3_1:66150802-66150821 None:intergenic 40.0%
TCAAGGAGATCAAAAGCAAG+AGG - chr3_1:66150806-66150825 Msa0369030:intron 40.0%
AAAACACTACTAAGAAGGGC+AGG - chr3_1:66150896-66150915 Msa0369030:intron 40.0%
GGTTTAAGCTAGCTGATAAG+TGG - chr3_1:66150917-66150936 Msa0369030:intron 40.0%
CGCGAAATGATTGCTAACAT+TGG - chr3_1:66151333-66151352 Msa0369030:intron 40.0%
TATCGTAACAGAAAACAGGG+AGG - chr3_1:66151479-66151498 Msa0369030:intron 40.0%
ATCGTAACAGAAAACAGGGA+GGG - chr3_1:66151480-66151499 Msa0369030:intron 40.0%
!! AGTATTCGGGCTAGTAAAGT+TGG + chr3_1:66152089-66152108 None:intergenic 40.0%
GGCAATCAAGTTTGTGTTGT+TGG + chr3_1:66152547-66152566 None:intergenic 40.0%
TGATGACAAGGAAAACTCCA+AGG - chr3_1:66152633-66152652 Msa0369030:intron 40.0%
GGAGCCAAAAAAAGCCATAA+GGG - chr3_1:66152911-66152930 Msa0369030:intron 40.0%
GAGCCAAAAAAAGCCATAAG+GGG - chr3_1:66152912-66152931 Msa0369030:intron 40.0%
AAGTTGTAAGTTCCTACTGC+CGG - chr3_1:66153150-66153169 Msa0369030:intron 40.0%
! AAAGTCTTTTTACCGGCAGT+AGG + chr3_1:66153165-66153184 None:intergenic 40.0%
AGGTATTTGGAAGGTAAAGG+AGG + chr3_1:66153188-66153207 None:intergenic 40.0%
!! GGAAGGTATTTGGAAGGTAA+AGG + chr3_1:66153191-66153210 None:intergenic 40.0%
CAATGACAAGTAAAACGGCA+AGG + chr3_1:66153284-66153303 None:intergenic 40.0%
! GGCACTCAAGTTTTTGTTGA+TGG - chr3_1:66153370-66153389 Msa0369030:intron 40.0%
AGCTTGACAACAATGAAAGG+AGG - chr3_1:66153779-66153798 Msa0369030:intron 40.0%
CCATTTGATCCTCCCAAAAA+AGG + chr3_1:66154096-66154115 None:intergenic 40.0%
!!! CCTTTTTTGGGAGGATCAAA+TGG - chr3_1:66154093-66154112 Msa0369030:CDS 40.0%
!! TTTTTGGGAGGATCAAATGG+TGG - chr3_1:66154096-66154115 Msa0369030:CDS 40.0%
CCTGGTCACATAATTAACGA+TGG + chr3_1:66154244-66154263 None:intergenic 40.0%
CCATCGTTAATTATGTGACC+AGG - chr3_1:66154241-66154260 Msa0369030:CDS 40.0%
!! GAGCTTTTTCTTCTGCAATC+TGG - chr3_1:66154313-66154332 Msa0369030:intron 40.0%
CAAGGCCTCCTTAAAATTAC+AGG - chr3_1:66154363-66154382 Msa0369030:intron 40.0%
AGACTGTTAGAGTAAGTACG+TGG - chr3_1:66154439-66154458 Msa0369030:intron 40.0%
TCATAGCAGAGTGGAGTTTA+GGG - chr3_1:66154498-66154517 Msa0369030:intron 40.0%
! CAACAAGTGCCGCATATATA+CGG + chr3_1:66154561-66154580 None:intergenic 40.0%
TGGATCGTTCATCGAGTTAT+CGG + chr3_1:66154716-66154735 None:intergenic 40.0%
TCGATGAACGATCCAAATGT+TGG - chr3_1:66154721-66154740 Msa0369030:intron 40.0%
!! CCTCATCAAAGTACCTTTTG+AGG + chr3_1:66154930-66154949 None:intergenic 40.0%
!! CCTCAAAAGGTACTTTGATG+AGG - chr3_1:66154927-66154946 Msa0369030:intron 40.0%
!! GATGAGGAGTGCCATTTAAA+AGG - chr3_1:66154943-66154962 Msa0369030:intron 40.0%
TACCCTGAACTAGAATGTCT+TGG - chr3_1:66155088-66155107 Msa0369030:intron 40.0%
TCAAGGGCTGCATAATTTGA+TGG + chr3_1:66155228-66155247 None:intergenic 40.0%
TCAAATTATGCAGCCCTTGA+AGG - chr3_1:66155228-66155247 Msa0369030:CDS 40.0%
GCAGTACAAAATGCCTTCAA+GGG + chr3_1:66155244-66155263 None:intergenic 40.0%
TGCAGTACAAAATGCCTTCA+AGG + chr3_1:66155245-66155264 None:intergenic 40.0%
CCTCAAAAAGCTGAGAGAAA+TGG + chr3_1:66155272-66155291 None:intergenic 40.0%
! CCATTTCTCTCAGCTTTTTG+AGG - chr3_1:66155269-66155288 Msa0369030:CDS 40.0%
!! TCTCAGCTTTTTGAGGAGAA+AGG - chr3_1:66155276-66155295 Msa0369030:CDS 40.0%
!! CTCAGCTTTTTGAGGAGAAA+GGG - chr3_1:66155277-66155296 Msa0369030:CDS 40.0%
GAAAAGGTCAAATTTCCGGC+TGG - chr3_1:66147376-66147395 Msa0369030:CDS 45.0%
AATTCACCTGGCAAATCCCA+TGG + chr3_1:66147517-66147536 None:intergenic 45.0%
GGATTTGAAAAGCTACGCCT+TGG - chr3_1:66147590-66147609 Msa0369030:intron 45.0%
AACACCCTCATTGGTAGATC+TGG - chr3_1:66148045-66148064 Msa0369030:intron 45.0%
TCCACCAGATCTACCAATGA+GGG + chr3_1:66148052-66148071 None:intergenic 45.0%
TTCCACCAGATCTACCAATG+AGG + chr3_1:66148053-66148072 None:intergenic 45.0%
! GAAGAAAAGTGGTGACGACT+AGG - chr3_1:66148076-66148095 Msa0369030:intron 45.0%
CTATGTACCACCGACACATA+AGG - chr3_1:66148189-66148208 Msa0369030:intron 45.0%
AGGGAGAGAAAATACCCAAC+TGG - chr3_1:66148415-66148434 Msa0369030:intron 45.0%
GAAAATACCCAACTGGCCAA+AGG - chr3_1:66148422-66148441 Msa0369030:intron 45.0%
TATTGGTCCTTTGGCCAGTT+GGG + chr3_1:66148432-66148451 None:intergenic 45.0%
! GCCAGCATTAGTAGCTCTAT+TGG + chr3_1:66148449-66148468 None:intergenic 45.0%
! GAGCTACTAATGCTGGCTAT+TGG - chr3_1:66148452-66148471 Msa0369030:intron 45.0%
GGTCATGCATGAATACCGAT+TGG - chr3_1:66148585-66148604 Msa0369030:intron 45.0%
! CATGCATGAATACCGATTGG+CGG - chr3_1:66148588-66148607 Msa0369030:intron 45.0%
! ATGCATGAATACCGATTGGC+GGG - chr3_1:66148589-66148608 Msa0369030:intron 45.0%
CAACCTATCCACACATGGAA+TGG - chr3_1:66148630-66148649 Msa0369030:intron 45.0%
GTCGATCCAAACATTCATCG+AGG - chr3_1:66148844-66148863 Msa0369030:intron 45.0%
TGGCTTGAACCAAACCTCAA+TGG - chr3_1:66149470-66149489 Msa0369030:intron 45.0%
TGAACCAAACCTCAATGGTC+GGG - chr3_1:66149475-66149494 Msa0369030:intron 45.0%
AATTCCCGACCATTGAGGTT+TGG + chr3_1:66149482-66149501 None:intergenic 45.0%
ATCACTGTTGAGGATGCAGT+TGG - chr3_1:66149530-66149549 Msa0369030:intron 45.0%
!! GTTTAGGCTTTGGTTTGAGG+TGG + chr3_1:66149574-66149593 None:intergenic 45.0%
GCATGTTTCAAAGGTGGTCT+GGG - chr3_1:66149655-66149674 Msa0369030:intron 45.0%
GTCTTGTAACCTCTAGGTAG+AGG + chr3_1:66150040-66150059 None:intergenic 45.0%
ACTTATTGTGCAGTGTGACG+AGG - chr3_1:66150120-66150139 Msa0369030:intron 45.0%
CTTATTGTGCAGTGTGACGA+GGG - chr3_1:66150121-66150140 Msa0369030:intron 45.0%
TATCGAGTTTAGTGGGAGAG+AGG + chr3_1:66150215-66150234 None:intergenic 45.0%
! TGGACTAGGCATTTCCTAGA+TGG + chr3_1:66150374-66150393 None:intergenic 45.0%
CAGCCTCATGAAATTGGACT+AGG + chr3_1:66150388-66150407 None:intergenic 45.0%
CTAGTCCAATTTCATGAGGC+TGG - chr3_1:66150386-66150405 Msa0369030:intron 45.0%
TCGGTTGAACGATGGAGATA+AGG + chr3_1:66150565-66150584 None:intergenic 45.0%
TCGCATATTCGGTTGAACGA+TGG + chr3_1:66150573-66150592 None:intergenic 45.0%
!! ATTGGATCGGCTCGCATATT+CGG + chr3_1:66150584-66150603 None:intergenic 45.0%
TAACGCCTGAGATCCTTCAA+GGG - chr3_1:66150615-66150634 Msa0369030:intron 45.0%
! TTTTCCCCTTGAAGGATCTC+AGG + chr3_1:66150623-66150642 None:intergenic 45.0%
CAGCGCAATTAGCTATGACT+TGG + chr3_1:66150858-66150877 None:intergenic 45.0%
! CGAAATCATCACGACCGTTT+TGG + chr3_1:66151432-66151451 None:intergenic 45.0%
ACAGAAAACAGGGAGGGTAA+TGG - chr3_1:66151486-66151505 Msa0369030:intron 45.0%
GGAGGATCATACAGATACCT+TGG - chr3_1:66151910-66151929 Msa0369030:intron 45.0%
!! GAATGGGAATTGGTTTGCCA+AGG + chr3_1:66151930-66151949 None:intergenic 45.0%
GCATCTTGAGCTTGTCTCAA+TGG + chr3_1:66152295-66152314 None:intergenic 45.0%
!!! TATGAGTTTTGGACCGCATG+TGG - chr3_1:66152676-66152695 Msa0369030:intron 45.0%
GGGAGCCAAAAAAAGCCATA+AGG - chr3_1:66152910-66152929 Msa0369030:intron 45.0%
!!! GGACCCCTTATGGCTTTTTT+TGG + chr3_1:66152918-66152937 None:intergenic 45.0%
GGATGCAAAGAGGGATATCT+CGG - chr3_1:66153707-66153726 Msa0369030:intron 45.0%
GATGCAAAGAGGGATATCTC+GGG - chr3_1:66153708-66153727 Msa0369030:intron 45.0%
GTGTTAAGATTGTGTCCCTC+AGG - chr3_1:66154053-66154072 Msa0369030:CDS 45.0%
TTAAGATTGTGTCCCTCAGG+TGG - chr3_1:66154056-66154075 Msa0369030:CDS 45.0%
CCAAACCAATATCCACCTGA+GGG + chr3_1:66154071-66154090 None:intergenic 45.0%
ACCAAACCAATATCCACCTG+AGG + chr3_1:66154072-66154091 None:intergenic 45.0%
!!! GGTTTGGTTCCTTTTTTGGG+AGG - chr3_1:66154084-66154103 Msa0369030:CDS 45.0%
!! GTGGATTAGGAACTTTGAGC+AGG - chr3_1:66154458-66154477 Msa0369030:intron 45.0%
TTGCAACTGTCATAGCAGAG+TGG - chr3_1:66154489-66154508 Msa0369030:intron 45.0%
GTCATAGCAGAGTGGAGTTT+AGG - chr3_1:66154497-66154516 Msa0369030:intron 45.0%
CATAGCAGAGTGGAGTTTAG+GGG - chr3_1:66154499-66154518 Msa0369030:intron 45.0%
TTTGAGCAGGAGACTGTCAA+AGG - chr3_1:66154676-66154695 Msa0369030:intron 45.0%
TCGTTCATCGAGTTATCGGA+CGG + chr3_1:66154712-66154731 None:intergenic 45.0%
! AACATGATTTGGGATAGGCC+TGG + chr3_1:66155173-66155192 None:intergenic 45.0%
! TGTTTCAAGTGTTCACACGG+AGG - chr3_1:66155189-66155208 Msa0369030:intron 45.0%
!!! TAAAAATTAGTTTTTATTTT+AGG - chr3_1:66152841-66152860 Msa0369030:intron 5.0%
!!! TTTTAAAATTTATATATCAA+AGG + chr3_1:66153212-66153231 None:intergenic 5.0%
!!! TTTTTTTTTTTTTTTTGAAA+CGG + chr3_1:66150524-66150543 None:intergenic 5.0%
GGAGAGAATCGATAACCAGC+CGG + chr3_1:66147394-66147413 None:intergenic 50.0%
TGTGAACCATGGGATTTGCC+AGG - chr3_1:66147508-66147527 Msa0369030:CDS 50.0%
ACCCTCATTGGTAGATCTGG+TGG - chr3_1:66148048-66148067 Msa0369030:intron 50.0%
! AAGTGGTGACGACTAGGGTT+TGG - chr3_1:66148082-66148101 Msa0369030:intron 50.0%
CTAGGGTTTGGCAAGGAGAA+AGG - chr3_1:66148094-66148113 Msa0369030:intron 50.0%
TTGGCAAGGAGAAAGGCCAA+TGG - chr3_1:66148101-66148120 Msa0369030:intron 50.0%
GGTGCGGTTACCTTATGTGT+CGG + chr3_1:66148202-66148221 None:intergenic 50.0%
CTATTGGTCCTTTGGCCAGT+TGG + chr3_1:66148433-66148452 None:intergenic 50.0%
GCTGGCTATTGGAAAGCAAC+AGG - chr3_1:66148463-66148482 Msa0369030:intron 50.0%
AGAGTGTGTTACCCGCCAAT+CGG + chr3_1:66148603-66148622 None:intergenic 50.0%
GAGCACAACCTATCCACACA+TGG - chr3_1:66148625-66148644 Msa0369030:intron 50.0%
TGACGAATTCCCGACCATTG+AGG + chr3_1:66149487-66149506 None:intergenic 50.0%
GGCATGTTTCAAAGGTGGTC+TGG - chr3_1:66149654-66149673 Msa0369030:intron 50.0%
GTCATCAGCTTCAGGACATG+TGG - chr3_1:66149689-66149708 Msa0369030:intron 50.0%
! AGATTGGTGCCTCTACCTAG+AGG - chr3_1:66150028-66150047 Msa0369030:intron 50.0%
TTGCGGGTGCATGTCAATGA+TGG + chr3_1:66150426-66150445 None:intergenic 50.0%
GAATATGCGAGCCGATCCAA+TGG - chr3_1:66150583-66150602 Msa0369030:intron 50.0%
GGCGTTAGAACGTCTTCCAT+TGG + chr3_1:66150602-66150621 None:intergenic 50.0%
CTAACGCCTGAGATCCTTCA+AGG - chr3_1:66150614-66150633 Msa0369030:intron 50.0%
AACGCCTGAGATCCTTCAAG+GGG - chr3_1:66150616-66150635 Msa0369030:intron 50.0%
!! TGACGAGGGTGCCAAAAGAA+TGG + chr3_1:66153003-66153022 None:intergenic 50.0%
TGTGTCCCTCAGGTGGATAT+TGG - chr3_1:66154063-66154082 Msa0369030:CDS 50.0%
! CCCTCAGGTGGATATTGGTT+TGG - chr3_1:66154068-66154087 Msa0369030:CDS 50.0%
GCTAGTAGAGAAAGAAGCCC+TGG + chr3_1:66154262-66154281 None:intergenic 50.0%
! CTGGCGCAACAGGTTTTACT+TGG - chr3_1:66154332-66154351 Msa0369030:intron 50.0%
CGGAACACCAAAACCTAAGC+AGG + chr3_1:66154541-66154560 None:intergenic 50.0%
GTCCATACCTTGCGTCTTGT+GGG - chr3_1:66154593-66154612 Msa0369030:intron 50.0%
TCCATACCTTGCGTCTTGTG+GGG - chr3_1:66154594-66154613 Msa0369030:intron 50.0%
GTAGGTAACAGTCGAAAGCC+AGG - chr3_1:66155152-66155171 Msa0369030:intron 50.0%
GTGACGACTAGGGTTTGGCA+AGG - chr3_1:66148087-66148106 Msa0369030:intron 55.0%
GCGGTTACCTTATGTGTCGG+TGG + chr3_1:66148199-66148218 None:intergenic 55.0%
!! TACAAAGGAAGAGCGCCGAG+TGG - chr3_1:66148547-66148566 Msa0369030:intron 55.0%
CTTCTGCAATCTGGCGCAAC+AGG - chr3_1:66154322-66154341 Msa0369030:intron 55.0%
AGCAGAGTGGAGTTTAGGGG+TGG - chr3_1:66154502-66154521 Msa0369030:intron 55.0%
GCAGAGTGGAGTTTAGGGGT+GGG - chr3_1:66154503-66154522 Msa0369030:intron 55.0%
CGTCCATACCTTGCGTCTTG+TGG - chr3_1:66154592-66154611 Msa0369030:intron 55.0%
TCCCCACAAGACGCAAGGTA+TGG + chr3_1:66154598-66154617 None:intergenic 55.0%
TACCTTGCGTCTTGTGGGGA+TGG - chr3_1:66154598-66154617 Msa0369030:intron 55.0%
CGCCATCCCCACAAGACGCA+AGG + chr3_1:66154603-66154622 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 66147334 66155365 66147334 ID=Msa0369030;Name=Msa0369030
chr3_1 mRNA 66147334 66155365 66147334 ID=Msa0369030-mRNA-1;Parent=Msa0369030;Name=Msa0369030-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|0|0|1|0|0.33|3|0|199
chr3_1 exon 66155207 66155365 66155207 ID=Msa0369030-mRNA-1:exon:13366;Parent=Msa0369030-mRNA-1
chr3_1 exon 66154048 66154278 66154048 ID=Msa0369030-mRNA-1:exon:13365;Parent=Msa0369030-mRNA-1
chr3_1 exon 66147334 66147543 66147334 ID=Msa0369030-mRNA-1:exon:13364;Parent=Msa0369030-mRNA-1
chr3_1 CDS 66155207 66155365 66155207 ID=Msa0369030-mRNA-1:cds;Parent=Msa0369030-mRNA-1
chr3_1 CDS 66154048 66154278 66154048 ID=Msa0369030-mRNA-1:cds;Parent=Msa0369030-mRNA-1
chr3_1 CDS 66147334 66147543 66147334 ID=Msa0369030-mRNA-1:cds;Parent=Msa0369030-mRNA-1
Gene Sequence

>Msa0369030

ATGGGATCAAATGAGAATGTTTACAATCAAAAAATGGAAAATGAAAAGGTCAAATTTCCGGCTGGTTATCGATTCTCTCCGACCGATGAAGAGCTTATAAATCAATACCTTGTCAAGAAGGTTGATGACAATAATTTCTGTGCTATAGATATTGCTGAAAGAAAATACCCAACTGGCCAAAGGACCAATAGAGCTACTAATGCTGGCTATTGGAAAGCAACAGGCAAAGACAAAGAGATTTTCAAGGGAAATGCATTAATTGGGATGAAAAAAACATTGGTTTTCTACAAAGGAAGAGCGCCGAGTGGTGAAAAAACCAATTGGGTCATGCATGAATACCGATTGGCGGGTAACACACTCTCTGAGCACAACCTATCCACACATGGAATGGTAACAGTCGAAAGCCAGGCCTATCCCAAATCATGTTTCAAGTGTTCACACGGAGGTTGTCCTATAACTCCATCAAATTATGCAGCCCTTGAAGGCATTTTGTACTGCAAGCACCATTTCTCTCAGCTTTTTGAGGAGAAAGGGAGCTACAATCATCTTATCAAGTCTGCATCAATCAAACGTGCAGCAGCCTCTGTTCCAGAATCTTGA
Protein sequence

>Msa0369030

MGSNENVYNQKMENEKVKFPAGYRFSPTDEELINQYLVKKVDDNNFCAIDIAERKYPTGQRTNRATNAGYWKATGKDKEIFKGNALIGMKKTLVFYKGRAPSGEKTNWVMHEYRLAGNTLSEHNLSTHGMVTVESQAYPKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFEEKGSYNHLIKSASIKRAAASVPES*