Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369070 | XP_003600854.2 | 92.130 | 216 | 17 | 0 | 30 | 245 | 1 | 216 | 1.04e-135 | 390 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369070 | sp|Q8S9H7|DIV_ANTMA | 36.842 | 133 | 68 | 3 | 77 | 200 | 76 | 201 | 3.10e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369070 | G7JAP1 | 92.130 | 216 | 17 | 0 | 30 | 245 | 1 | 216 | 4.97e-136 | 390 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0369070 | TF | MYB-related |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369070 | MtrunA17_Chr3g0113121 | 92.130 | 216 | 17 | 0 | 30 | 245 | 1 | 216 | 9.57e-140 | 390 |
| Msa0369070 | MtrunA17_Chr5g0436501 | 41.401 | 157 | 78 | 6 | 50 | 200 | 48 | 196 | 8.15e-21 | 88.6 |
| Msa0369070 | MtrunA17_Chr5g0429521 | 37.209 | 129 | 68 | 2 | 78 | 200 | 80 | 201 | 1.78e-17 | 80.1 |
| Msa0369070 | MtrunA17_Chr5g0440731 | 57.143 | 77 | 27 | 4 | 121 | 196 | 102 | 173 | 5.15e-17 | 78.6 |
| Msa0369070 | MtrunA17_Chr3g0104071 | 35.583 | 163 | 85 | 4 | 49 | 200 | 63 | 216 | 6.45e-17 | 78.6 |
| Msa0369070 | MtrunA17_Chr5g0409841 | 36.879 | 141 | 78 | 4 | 67 | 203 | 32 | 165 | 1.83e-16 | 75.9 |
| Msa0369070 | MtrunA17_Chr7g0241761 | 40.708 | 113 | 53 | 3 | 88 | 200 | 111 | 209 | 6.73e-16 | 75.5 |
| Msa0369070 | MtrunA17_Chr5g0440741 | 58.904 | 73 | 24 | 4 | 125 | 196 | 101 | 168 | 8.99e-16 | 75.1 |
| Msa0369070 | MtrunA17_Chr5g0409831 | 43.023 | 86 | 43 | 2 | 90 | 169 | 37 | 122 | 1.24e-15 | 73.6 |
| Msa0369070 | MtrunA17_Chr3g0135671 | 38.462 | 117 | 56 | 2 | 79 | 195 | 58 | 158 | 6.18e-15 | 71.6 |
| Msa0369070 | MtrunA17_Chr1g0210471 | 29.240 | 171 | 94 | 4 | 29 | 199 | 49 | 192 | 4.20e-14 | 69.7 |
| Msa0369070 | MtrunA17_Chr4g0059701 | 33.333 | 117 | 66 | 2 | 53 | 169 | 25 | 129 | 1.22e-13 | 68.9 |
| Msa0369070 | MtrunA17_Chr1g0162081 | 45.570 | 79 | 36 | 2 | 121 | 199 | 119 | 190 | 9.25e-13 | 66.6 |
| Msa0369070 | MtrunA17_Chr6g0488471 | 37.692 | 130 | 57 | 6 | 112 | 241 | 87 | 192 | 1.27e-12 | 65.9 |
| Msa0369070 | MtrunA17_Chr2g0331031 | 39.759 | 83 | 43 | 1 | 115 | 197 | 100 | 175 | 1.51e-12 | 66.2 |
| Msa0369070 | MtrunA17_Chr4g0055931 | 36.607 | 112 | 52 | 2 | 88 | 199 | 71 | 163 | 2.93e-12 | 65.5 |
| Msa0369070 | MtrunA17_Chr4g0062741 | 44.304 | 79 | 37 | 2 | 121 | 199 | 135 | 206 | 4.14e-12 | 64.7 |
| Msa0369070 | MtrunA17_Chr5g0415191 | 55.102 | 49 | 22 | 0 | 121 | 169 | 99 | 147 | 4.92e-12 | 64.7 |
| Msa0369070 | MtrunA17_Chr8g0365011 | 35.948 | 153 | 64 | 7 | 61 | 199 | 42 | 174 | 7.91e-12 | 63.5 |
| Msa0369070 | MtrunA17_Chr5g0432921 | 45.833 | 96 | 43 | 5 | 93 | 187 | 85 | 172 | 7.92e-12 | 63.2 |
| Msa0369070 | MtrunA17_Chr8g0389241 | 44.000 | 75 | 34 | 1 | 121 | 195 | 102 | 168 | 1.14e-11 | 63.2 |
| Msa0369070 | MtrunA17_Chr6g0452791 | 56.522 | 46 | 20 | 0 | 124 | 169 | 80 | 125 | 7.74e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0369070 | AT5G05790.2 | 41.406 | 128 | 63 | 3 | 78 | 201 | 82 | 201 | 5.90e-20 | 86.7 |
| Msa0369070 | AT5G05790.1 | 41.406 | 128 | 63 | 3 | 78 | 201 | 82 | 201 | 5.90e-20 | 86.7 |
| Msa0369070 | AT3G11280.2 | 35.870 | 184 | 90 | 9 | 25 | 201 | 35 | 197 | 4.35e-19 | 84.0 |
| Msa0369070 | AT3G11280.1 | 35.870 | 184 | 90 | 9 | 25 | 201 | 35 | 197 | 4.35e-19 | 84.0 |
| Msa0369070 | AT5G01200.1 | 45.299 | 117 | 50 | 4 | 85 | 200 | 112 | 215 | 2.68e-18 | 82.0 |
| Msa0369070 | AT2G38090.1 | 37.069 | 116 | 63 | 2 | 88 | 200 | 102 | 210 | 2.18e-16 | 77.0 |
| Msa0369070 | AT5G58900.1 | 44.681 | 94 | 45 | 1 | 107 | 200 | 124 | 210 | 4.24e-16 | 76.3 |
| Msa0369070 | AT5G08520.1 | 36.207 | 174 | 84 | 9 | 41 | 198 | 23 | 185 | 1.52e-15 | 74.7 |
| Msa0369070 | AT4G09450.1 | 39.837 | 123 | 61 | 4 | 99 | 215 | 66 | 181 | 4.18e-14 | 69.3 |
| Msa0369070 | AT5G04760.1 | 49.367 | 79 | 33 | 2 | 121 | 199 | 96 | 167 | 1.43e-13 | 68.2 |
| Msa0369070 | AT1G19000.2 | 50.877 | 57 | 28 | 0 | 113 | 169 | 91 | 147 | 5.05e-13 | 67.4 |
| Msa0369070 | AT1G19000.1 | 50.877 | 57 | 28 | 0 | 113 | 169 | 91 | 147 | 5.05e-13 | 67.4 |
| Msa0369070 | AT5G47390.1 | 35.878 | 131 | 66 | 3 | 115 | 245 | 87 | 199 | 6.92e-13 | 67.8 |
| Msa0369070 | AT1G70000.1 | 41.096 | 73 | 41 | 1 | 99 | 169 | 71 | 143 | 1.37e-12 | 65.9 |
| Msa0369070 | AT1G70000.2 | 41.096 | 73 | 41 | 1 | 99 | 169 | 71 | 143 | 1.37e-12 | 65.9 |
| Msa0369070 | AT3G10580.1 | 46.835 | 79 | 33 | 1 | 121 | 199 | 92 | 161 | 2.55e-12 | 65.5 |
| Msa0369070 | AT3G10580.2 | 46.835 | 79 | 33 | 1 | 121 | 199 | 92 | 161 | 2.58e-12 | 65.1 |
| Msa0369070 | AT1G49010.1 | 45.570 | 79 | 36 | 2 | 121 | 199 | 131 | 202 | 3.78e-12 | 65.5 |
| Msa0369070 | AT5G56840.1 | 52.632 | 57 | 27 | 0 | 121 | 177 | 88 | 144 | 2.31e-11 | 62.4 |
| Msa0369070 | AT5G61620.1 | 45.570 | 79 | 36 | 1 | 121 | 199 | 105 | 176 | 3.69e-11 | 62.4 |
| Msa0369070 | AT1G74840.2 | 55.102 | 49 | 22 | 0 | 121 | 169 | 93 | 141 | 5.95e-11 | 61.2 |
| Msa0369070 | AT1G74840.1 | 55.102 | 49 | 22 | 0 | 121 | 169 | 93 | 141 | 6.49e-11 | 61.2 |
| Msa0369070 | AT3G10590.1 | 41.667 | 108 | 50 | 4 | 114 | 221 | 101 | 195 | 8.70e-11 | 60.1 |
Find 36 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGATCTTGATCACATTCT+TGG | 0.190525 | 3_1:+66193621 | None:intergenic |
| TCAACCAATAATCATCTTCT+TGG | 0.216049 | 3_1:+66194288 | None:intergenic |
| ATTTCCAAGAAGATGATTAT+TGG | 0.238910 | 3_1:-66194292 | Msa0369070:CDS |
| GACTCATATGCGTGGTTATT+TGG | 0.243758 | 3_1:-66193704 | Msa0369070:CDS |
| ATAACTACTCTTGATCTTCT+TGG | 0.251399 | 3_1:-66193734 | Msa0369070:CDS |
| AGTTCTATTGTTATTATTAT+CGG | 0.281602 | 3_1:+66194121 | None:intergenic |
| TAGAATGGTAGAGAATATTC+TGG | 0.354560 | 3_1:-66194342 | Msa0369070:CDS |
| TTTGAGCATGGCTTGCTACT+TGG | 0.356659 | 3_1:+66193837 | None:intergenic |
| AAAATATCAAAAGGAAACTT+AGG | 0.373972 | 3_1:-66193772 | Msa0369070:CDS |
| CATTCAAGAAAGTGGTTCAT+TGG | 0.387227 | 3_1:-66194070 | Msa0369070:CDS |
| TTGAGCATGGCTTGCTACTT+GGG | 0.417939 | 3_1:+66193838 | None:intergenic |
| TATTTGTAGGCGTTTCTTGA+AGG | 0.450413 | 3_1:-66193930 | Msa0369070:intron |
| TCAAACTCAAATAATAGTTA+TGG | 0.460594 | 3_1:-66194395 | Msa0369070:CDS |
| AAATATCAAAAGGAAACTTA+GGG | 0.461487 | 3_1:-66193771 | Msa0369070:CDS |
| AGATGATTATTGGTTGATGA+AGG | 0.467158 | 3_1:-66194282 | Msa0369070:CDS |
| AAAGTGGAAAGAAATCTCTA+AGG | 0.476209 | 3_1:-66193885 | Msa0369070:CDS |
| AAAGAAATCATTCAAGAAAG+TGG | 0.476326 | 3_1:-66194078 | Msa0369070:CDS |
| ATTTGTAGGCGTTTCTTGAA+GGG | 0.494586 | 3_1:-66193929 | Msa0369070:intron |
| GATCAAGAGTAGTTATATCA+TGG | 0.499404 | 3_1:+66193741 | None:intergenic |
| GCATGGCTTGCTACTTGGGA+TGG | 0.505418 | 3_1:+66193842 | None:intergenic |
| GGACTTCTACACGGCAAAGA+AGG | 0.509282 | 3_1:-66193908 | Msa0369070:CDS |
| TGTTGTCGTCTTCAATCACT+TGG | 0.511632 | 3_1:+66193678 | None:intergenic |
| CATCGAAGAAAGTAGTAGAA+TGG | 0.523965 | 3_1:-66194357 | Msa0369070:CDS |
| AGAATGGTAGAGAATATTCT+GGG | 0.545240 | 3_1:-66194341 | Msa0369070:CDS |
| TACACGGCAAAGAAGGAAAG+TGG | 0.551960 | 3_1:-66193901 | Msa0369070:CDS |
| TTGATCAACACTACATAGCA+TGG | 0.559638 | 3_1:+66194256 | None:intergenic |
| ACTCAGCATTAACAATGGAA+TGG | 0.588865 | 3_1:-66194439 | None:intergenic |
| ATACATATGAACATATCAAG+TGG | 0.590413 | 3_1:+66193586 | None:intergenic |
| TTCTTGAAGGGACTTCTACA+CGG | 0.594579 | 3_1:-66193917 | Msa0369070:CDS |
| GAAGACGACAACAATAACAA+TGG | 0.605151 | 3_1:-66193668 | Msa0369070:CDS |
| TCAGCACAACATCGATGAAG+TGG | 0.609150 | 3_1:-66194228 | Msa0369070:CDS |
| CAATAGAACTACGAATATCG+TGG | 0.625780 | 3_1:-66194108 | Msa0369070:CDS |
| TTATTATTATCGGTTGCATG+AGG | 0.632701 | 3_1:+66194131 | None:intergenic |
| GCACAACATCGATGAAGTGG+TGG | 0.668571 | 3_1:-66194225 | Msa0369070:CDS |
| AATATCAAAAGGAAACTTAG+GGG | 0.670754 | 3_1:-66193770 | Msa0369070:CDS |
| GAAGTGATGACTCATATGCG+TGG | 0.764866 | 3_1:-66193712 | Msa0369070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGTTCTATTGTTATTATTAT+CGG | + | chr3_1:66193908-66193927 | None:intergenic | 15.0% |
| !!! | AGTTCTATTGTTATTATTAT+CGG | + | chr3_1:66193908-66193927 | None:intergenic | 15.0% |
| !! | TCAAACTCAAATAATAGTTA+TGG | - | chr3_1:66193631-66193650 | Msa0369070:CDS | 20.0% |
| !!! | TTTCTTGAATGATTTCTTTT+TGG | + | chr3_1:66193947-66193966 | None:intergenic | 20.0% |
| !! | ATGATAGCAAAAATATCAAA+AGG | - | chr3_1:66194245-66194264 | Msa0369070:CDS | 20.0% |
| !! | AAAATATCAAAAGGAAACTT+AGG | - | chr3_1:66194254-66194273 | Msa0369070:CDS | 20.0% |
| !! | AAATATCAAAAGGAAACTTA+GGG | - | chr3_1:66194255-66194274 | Msa0369070:CDS | 20.0% |
| !! | TCAAACTCAAATAATAGTTA+TGG | - | chr3_1:66193631-66193650 | Msa0369070:CDS | 20.0% |
| !!! | TTTCTTGAATGATTTCTTTT+TGG | + | chr3_1:66193947-66193966 | None:intergenic | 20.0% |
| !! | ATGATAGCAAAAATATCAAA+AGG | - | chr3_1:66194245-66194264 | Msa0369070:CDS | 20.0% |
| !! | AAAATATCAAAAGGAAACTT+AGG | - | chr3_1:66194254-66194273 | Msa0369070:CDS | 20.0% |
| !! | AAATATCAAAAGGAAACTTA+GGG | - | chr3_1:66194255-66194274 | Msa0369070:CDS | 20.0% |
| ! | ATTTCCAAGAAGATGATTAT+TGG | - | chr3_1:66193734-66193753 | Msa0369070:CDS | 25.0% |
| ! | AAAGAAATCATTCAAGAAAG+TGG | - | chr3_1:66193948-66193967 | Msa0369070:intron | 25.0% |
| ! | GAAACAATAAACGATGAAAA+AGG | + | chr3_1:66194005-66194024 | None:intergenic | 25.0% |
| !!! | GACATGGATTTTTTATTTGT+AGG | - | chr3_1:66194083-66194102 | Msa0369070:CDS | 25.0% |
| !!! | TTTTTTCATACTTTTGAGCA+TGG | + | chr3_1:66194204-66194223 | None:intergenic | 25.0% |
| !! | ATGCTCAAAAGTATGAAAAA+AGG | - | chr3_1:66194203-66194222 | Msa0369070:CDS | 25.0% |
| ! | AATATCAAAAGGAAACTTAG+GGG | - | chr3_1:66194256-66194275 | Msa0369070:CDS | 25.0% |
| ! | ATTTCCAAGAAGATGATTAT+TGG | - | chr3_1:66193734-66193753 | Msa0369070:CDS | 25.0% |
| ! | AAAGAAATCATTCAAGAAAG+TGG | - | chr3_1:66193948-66193967 | Msa0369070:intron | 25.0% |
| ! | GAAACAATAAACGATGAAAA+AGG | + | chr3_1:66194005-66194024 | None:intergenic | 25.0% |
| !!! | GACATGGATTTTTTATTTGT+AGG | - | chr3_1:66194083-66194102 | Msa0369070:CDS | 25.0% |
| !!! | TTTTTTCATACTTTTGAGCA+TGG | + | chr3_1:66194204-66194223 | None:intergenic | 25.0% |
| !! | ATGCTCAAAAGTATGAAAAA+AGG | - | chr3_1:66194203-66194222 | Msa0369070:CDS | 25.0% |
| ! | AATATCAAAAGGAAACTTAG+GGG | - | chr3_1:66194256-66194275 | Msa0369070:CDS | 25.0% |
| TAGAATGGTAGAGAATATTC+TGG | - | chr3_1:66193684-66193703 | Msa0369070:CDS | 30.0% | |
| AGAATGGTAGAGAATATTCT+GGG | - | chr3_1:66193685-66193704 | Msa0369070:CDS | 30.0% | |
| TCAACCAATAATCATCTTCT+TGG | + | chr3_1:66193741-66193760 | None:intergenic | 30.0% | |
| !! | AGATGATTATTGGTTGATGA+AGG | - | chr3_1:66193744-66193763 | Msa0369070:CDS | 30.0% |
| ! | TTATTATTATCGGTTGCATG+AGG | + | chr3_1:66193898-66193917 | None:intergenic | 30.0% |
| AAAGTGGAAAGAAATCTCTA+AGG | - | chr3_1:66194141-66194160 | Msa0369070:CDS | 30.0% | |
| GATCAAGAGTAGTTATATCA+TGG | + | chr3_1:66194288-66194307 | None:intergenic | 30.0% | |
| ATAACTACTCTTGATCTTCT+TGG | - | chr3_1:66194292-66194311 | Msa0369070:CDS | 30.0% | |
| TAGAATGGTAGAGAATATTC+TGG | - | chr3_1:66193684-66193703 | Msa0369070:CDS | 30.0% | |
| AGAATGGTAGAGAATATTCT+GGG | - | chr3_1:66193685-66193704 | Msa0369070:CDS | 30.0% | |
| TCAACCAATAATCATCTTCT+TGG | + | chr3_1:66193741-66193760 | None:intergenic | 30.0% | |
| !! | AGATGATTATTGGTTGATGA+AGG | - | chr3_1:66193744-66193763 | Msa0369070:CDS | 30.0% |
| ! | TTATTATTATCGGTTGCATG+AGG | + | chr3_1:66193898-66193917 | None:intergenic | 30.0% |
| AAAGTGGAAAGAAATCTCTA+AGG | - | chr3_1:66194141-66194160 | Msa0369070:CDS | 30.0% | |
| GATCAAGAGTAGTTATATCA+TGG | + | chr3_1:66194288-66194307 | None:intergenic | 30.0% | |
| ATAACTACTCTTGATCTTCT+TGG | - | chr3_1:66194292-66194311 | Msa0369070:CDS | 30.0% | |
| CATCGAAGAAAGTAGTAGAA+TGG | - | chr3_1:66193669-66193688 | Msa0369070:CDS | 35.0% | |
| TTGATCAACACTACATAGCA+TGG | + | chr3_1:66193773-66193792 | None:intergenic | 35.0% | |
| CAATAGAACTACGAATATCG+TGG | - | chr3_1:66193918-66193937 | Msa0369070:CDS | 35.0% | |
| CATTCAAGAAAGTGGTTCAT+TGG | - | chr3_1:66193956-66193975 | Msa0369070:intron | 35.0% | |
| TATTTGTAGGCGTTTCTTGA+AGG | - | chr3_1:66194096-66194115 | Msa0369070:CDS | 35.0% | |
| ATTTGTAGGCGTTTCTTGAA+GGG | - | chr3_1:66194097-66194116 | Msa0369070:CDS | 35.0% | |
| GAAGACGACAACAATAACAA+TGG | - | chr3_1:66194358-66194377 | Msa0369070:CDS | 35.0% | |
| CATGATCTTGATCACATTCT+TGG | + | chr3_1:66194408-66194427 | None:intergenic | 35.0% | |
| CATCGAAGAAAGTAGTAGAA+TGG | - | chr3_1:66193669-66193688 | Msa0369070:CDS | 35.0% | |
| TTGATCAACACTACATAGCA+TGG | + | chr3_1:66193773-66193792 | None:intergenic | 35.0% | |
| CAATAGAACTACGAATATCG+TGG | - | chr3_1:66193918-66193937 | Msa0369070:CDS | 35.0% | |
| CATTCAAGAAAGTGGTTCAT+TGG | - | chr3_1:66193956-66193975 | Msa0369070:intron | 35.0% | |
| TATTTGTAGGCGTTTCTTGA+AGG | - | chr3_1:66194096-66194115 | Msa0369070:CDS | 35.0% | |
| ATTTGTAGGCGTTTCTTGAA+GGG | - | chr3_1:66194097-66194116 | Msa0369070:CDS | 35.0% | |
| GAAGACGACAACAATAACAA+TGG | - | chr3_1:66194358-66194377 | Msa0369070:CDS | 35.0% | |
| CATGATCTTGATCACATTCT+TGG | + | chr3_1:66194408-66194427 | None:intergenic | 35.0% | |
| TTCTTGAAGGGACTTCTACA+CGG | - | chr3_1:66194109-66194128 | Msa0369070:CDS | 40.0% | |
| GACTCATATGCGTGGTTATT+TGG | - | chr3_1:66194322-66194341 | Msa0369070:CDS | 40.0% | |
| TGTTGTCGTCTTCAATCACT+TGG | + | chr3_1:66194351-66194370 | None:intergenic | 40.0% | |
| TTCTTGAAGGGACTTCTACA+CGG | - | chr3_1:66194109-66194128 | Msa0369070:CDS | 40.0% | |
| GACTCATATGCGTGGTTATT+TGG | - | chr3_1:66194322-66194341 | Msa0369070:CDS | 40.0% | |
| TGTTGTCGTCTTCAATCACT+TGG | + | chr3_1:66194351-66194370 | None:intergenic | 40.0% | |
| TCAGCACAACATCGATGAAG+TGG | - | chr3_1:66193798-66193817 | Msa0369070:CDS | 45.0% | |
| !! | TCGACGAGCGTTTCACTTTT+TGG | - | chr3_1:66193841-66193860 | Msa0369070:CDS | 45.0% |
| TACACGGCAAAGAAGGAAAG+TGG | - | chr3_1:66194125-66194144 | Msa0369070:CDS | 45.0% | |
| !! | TTGAGCATGGCTTGCTACTT+GGG | + | chr3_1:66194191-66194210 | None:intergenic | 45.0% |
| !! | TTTGAGCATGGCTTGCTACT+TGG | + | chr3_1:66194192-66194211 | None:intergenic | 45.0% |
| GAAGTGATGACTCATATGCG+TGG | - | chr3_1:66194314-66194333 | Msa0369070:CDS | 45.0% | |
| TCAGCACAACATCGATGAAG+TGG | - | chr3_1:66193798-66193817 | Msa0369070:CDS | 45.0% | |
| !! | TCGACGAGCGTTTCACTTTT+TGG | - | chr3_1:66193841-66193860 | Msa0369070:CDS | 45.0% |
| TACACGGCAAAGAAGGAAAG+TGG | - | chr3_1:66194125-66194144 | Msa0369070:CDS | 45.0% | |
| !! | TTGAGCATGGCTTGCTACTT+GGG | + | chr3_1:66194191-66194210 | None:intergenic | 45.0% |
| !! | TTTGAGCATGGCTTGCTACT+TGG | + | chr3_1:66194192-66194211 | None:intergenic | 45.0% |
| GAAGTGATGACTCATATGCG+TGG | - | chr3_1:66194314-66194333 | Msa0369070:CDS | 45.0% | |
| GCACAACATCGATGAAGTGG+TGG | - | chr3_1:66193801-66193820 | Msa0369070:CDS | 50.0% | |
| GCGCACACATGTGTTTGACA+TGG | - | chr3_1:66194067-66194086 | Msa0369070:CDS | 50.0% | |
| GGACTTCTACACGGCAAAGA+AGG | - | chr3_1:66194118-66194137 | Msa0369070:CDS | 50.0% | |
| GCACAACATCGATGAAGTGG+TGG | - | chr3_1:66193801-66193820 | Msa0369070:CDS | 50.0% | |
| GCGCACACATGTGTTTGACA+TGG | - | chr3_1:66194067-66194086 | Msa0369070:CDS | 50.0% | |
| GGACTTCTACACGGCAAAGA+AGG | - | chr3_1:66194118-66194137 | Msa0369070:CDS | 50.0% | |
| !! | GCATGGCTTGCTACTTGGGA+TGG | + | chr3_1:66194187-66194206 | None:intergenic | 55.0% |
| !! | GCATGGCTTGCTACTTGGGA+TGG | + | chr3_1:66194187-66194206 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 66193601 | 66194447 | 66193601 | ID=Msa0369070;Name=Msa0369070 |
| chr3_1 | mRNA | 66193601 | 66194447 | 66193601 | ID=Msa0369070-mRNA-1;Parent=Msa0369070;Name=Msa0369070-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|2|0|245 |
| chr3_1 | exon | 66194053 | 66194447 | 66194053 | ID=Msa0369070-mRNA-1:exon:13399;Parent=Msa0369070-mRNA-1 |
| chr3_1 | exon | 66193601 | 66193943 | 66193601 | ID=Msa0369070-mRNA-1:exon:13398;Parent=Msa0369070-mRNA-1 |
| chr3_1 | CDS | 66194053 | 66194447 | 66194053 | ID=Msa0369070-mRNA-1:cds;Parent=Msa0369070-mRNA-1 |
| chr3_1 | CDS | 66193601 | 66193943 | 66193601 | ID=Msa0369070-mRNA-1:cds;Parent=Msa0369070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
