AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0369510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369510 MtrunA17_Chr3g0114161 92.639 1277 41 2 21 1297 25 1248 0.0 2417
Msa0369510 MtrunA17_Chr7g0224051 79.298 855 157 7 443 1296 281 1116 0.0 1359
Msa0369510 MtrunA17_Chr7g0224051 66.352 318 70 4 47 363 1 282 2.49e-122 408
Msa0369510 MtrunA17_Chr5g0437621 54.572 1367 479 29 5 1296 4 1303 0.0 1332
Msa0369510 MtrunA17_Chr1g0191141 72.418 881 213 11 418 1296 250 1102 0.0 1249
Msa0369510 MtrunA17_Chr1g0191141 58.621 261 74 2 21 281 8 234 8.72e-82 292
Msa0369510 MtrunA17_Chr7g0233021 35.359 724 395 18 580 1277 537 1213 2.19e-112 382
Msa0369510 MtrunA17_Chr7g0233031 33.594 768 434 19 542 1283 515 1232 3.17e-112 382
Msa0369510 MtrunA17_Chr7g0225791 33.970 733 432 17 559 1277 574 1268 2.53e-109 374
Msa0369510 MtrunA17_Chr4g0047081 33.750 720 422 16 580 1285 548 1226 1.07e-105 363
Msa0369510 MtrunA17_Chr7g0232971 32.988 773 429 20 559 1297 581 1298 4.90e-105 362
Msa0369510 MtrunA17_Chr7g0224031 73.059 219 58 1 858 1076 25 242 8.81e-101 320
Msa0369510 MtrunA17_Chr7g0232991 32.344 640 373 15 677 1285 38 648 3.94e-90 306
Msa0369510 MtrunA17_Chr2g0296421 31.087 727 399 21 538 1252 365 1001 4.05e-88 309
Msa0369510 MtrunA17_Chr8g0352361 30.374 721 412 21 538 1252 216 852 2.93e-85 298
Msa0369510 MtrunA17_Chr7g0233001 34.015 538 316 12 760 1285 1 511 5.19e-78 268
Msa0369510 MtrunA17_Chr7g0224021 74.336 113 27 1 681 793 1 111 1.31e-52 180
Msa0369510 MtrunA17_Chr2g0320781 35.223 247 144 6 1005 1245 4 240 2.20e-38 144
Msa0369510 MtrunA17_Chr8g0384531 24.399 582 339 18 695 1244 368 880 1.35e-30 131
Msa0369510 MtrunA17_Chr5g0403921 25.730 548 318 18 746 1280 206 677 2.36e-26 117
Msa0369510 MtrunA17_Chr1g0190391 30.290 241 137 8 705 941 576 789 5.71e-24 109
Msa0369510 MtrunA17_Chr4g0052341 23.927 606 332 23 695 1271 728 1233 3.80e-23 107
Msa0369510 MtrunA17_Chr3g0137091 24.780 569 322 19 745 1286 310 799 1.38e-21 102
Msa0369510 MtrunA17_Chr5g0394201 23.732 552 320 17 740 1279 379 841 3.32e-18 90.9
Msa0369510 MtrunA17_Chr1g0190381 34.969 163 94 4 1104 1257 196 355 3.75e-18 89.7
Msa0369510 MtrunA17_Chr1g0205891 23.230 551 323 17 740 1278 392 854 2.87e-16 84.7
Msa0369510 MtrunA17_Chr5g0393461 32.639 144 93 2 1149 1290 585 726 1.25e-15 82.4
Msa0369510 MtrunA17_Chr4g0040301 32.335 167 100 4 1107 1266 389 549 7.54e-15 79.7
Msa0369510 MtrunA17_Chr3g0114111 88.889 36 4 0 1250 1285 1 36 1.16e-13 67.4
Msa0369510 MtrunA17_Chr1g0183681 31.429 140 90 3 1113 1252 750 883 9.46e-13 73.2
Msa0369510 MtrunA17_Chr5g0442141 30.168 179 114 4 1065 1241 902 1071 3.57e-12 71.6
Msa0369510 MtrunA17_Chr3g0095091 29.609 179 115 4 1065 1241 856 1025 3.68e-12 71.6
Msa0369510 MtrunA17_Chr7g0232121 22.744 554 314 21 745 1262 60 535 5.53e-12 70.5
Msa0369510 MtrunA17_Chr7g0257101 29.545 176 116 5 1079 1253 1173 1341 2.57e-11 68.6
Msa0369510 MtrunA17_Chr8g0348721 23.866 507 277 20 746 1224 1009 1434 4.20e-11 68.2
Msa0369510 MtrunA17_Chr7g0255821 38.298 94 57 1 1143 1235 690 783 5.37e-11 67.4
Msa0369510 MtrunA17_Chr2g0320751 41.379 87 50 1 1149 1235 896 981 9.63e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0369510 AT5G20420.1 61.266 790 280 11 518 1296 486 1260 0.0 947
Msa0369510 AT5G20420.1 37.363 364 153 13 5 351 3 308 3.67e-53 204
Msa0369510 AT3G42670.2 58.274 846 306 14 473 1296 434 1254 0.0 947
Msa0369510 AT3G42670.2 34.270 356 182 10 5 357 3 309 4.71e-48 188
Msa0369510 AT3G42670.3 58.274 846 306 14 473 1296 434 1254 0.0 947
Msa0369510 AT3G42670.3 34.270 356 182 10 5 357 3 309 4.71e-48 188
Msa0369510 AT3G42670.1 58.274 846 306 14 473 1296 434 1254 0.0 947
Msa0369510 AT3G42670.1 34.270 356 182 10 5 357 3 309 4.71e-48 188
Msa0369510 AT3G42670.4 58.175 844 312 13 473 1296 434 1256 0.0 946
Msa0369510 AT3G42670.4 34.270 356 182 10 5 357 3 309 4.41e-48 188
Msa0369510 AT3G24340.1 32.457 761 423 18 540 1285 430 1114 1.67e-106 364
Msa0369510 AT1G05490.1 32.466 730 429 18 578 1281 693 1384 2.54e-101 353
Msa0369510 AT2G16390.2 29.686 795 437 24 488 1252 148 850 2.18e-80 284
Msa0369510 AT2G21450.3 31.003 658 368 20 614 1252 92 682 2.24e-80 280
Msa0369510 AT2G21450.1 31.003 658 368 20 614 1252 183 773 4.29e-80 282
Msa0369510 AT2G21450.2 31.003 658 368 20 614 1252 190 780 4.34e-80 282
Msa0369510 AT2G16390.1 29.686 795 437 24 488 1252 145 847 4.44e-80 283
Msa0369510 AT3G19210.2 23.217 603 348 22 711 1276 180 704 1.29e-28 125
Msa0369510 AT3G19210.1 23.636 605 345 23 711 1276 180 706 3.53e-28 123
Msa0369510 AT3G19210.3 23.636 605 345 22 711 1276 180 706 5.59e-28 122
Msa0369510 AT5G63950.1 24.653 576 332 22 701 1244 367 872 6.97e-28 123
Msa0369510 AT5G63950.2 24.607 573 319 21 701 1244 367 855 1.71e-27 121
Msa0369510 AT1G08600.4 27.193 342 186 14 710 1041 718 1006 4.05e-24 110
Msa0369510 AT1G08600.4 34.356 163 95 4 1104 1257 1123 1282 3.23e-17 88.6
Msa0369510 AT1G08600.3 27.193 342 186 14 710 1041 718 1006 4.05e-24 110
Msa0369510 AT1G08600.3 34.356 163 95 4 1104 1257 1123 1282 3.23e-17 88.6
Msa0369510 AT1G08600.2 27.193 342 186 14 710 1041 718 1006 4.05e-24 110
Msa0369510 AT1G08600.2 34.356 163 95 4 1104 1257 1123 1282 3.23e-17 88.6
Msa0369510 AT5G44800.1 25.180 556 309 22 742 1279 707 1173 7.32e-21 100
Msa0369510 AT1G08600.1 34.356 163 95 4 1104 1257 1102 1261 3.41e-17 88.6
Msa0369510 AT3G06010.1 23.732 552 321 17 740 1279 419 882 4.36e-17 87.8
Msa0369510 AT2G44980.1 25.832 511 288 22 752 1248 80 513 8.39e-17 86.7
Msa0369510 AT1G03750.1 30.939 181 111 5 1094 1266 523 697 9.37e-16 83.2
Msa0369510 AT5G66750.1 34.091 176 109 4 1114 1288 540 709 1.45e-15 82.4
Msa0369510 AT2G25170.1 25.620 363 202 14 887 1235 419 727 4.28e-15 81.6
Msa0369510 AT2G25170.4 25.620 363 202 14 887 1235 419 727 4.28e-15 81.6
Msa0369510 AT2G25170.2 25.620 363 202 14 887 1235 436 744 4.52e-15 81.3
Msa0369510 AT2G25170.3 25.620 363 202 14 887 1235 445 753 5.46e-15 81.3
Msa0369510 AT2G44980.3 24.584 541 310 22 745 1258 72 541 1.52e-14 79.3
Msa0369510 AT2G44980.2 25.000 524 295 22 752 1248 80 532 2.71e-14 78.6
Msa0369510 AT2G13370.1 33.846 130 79 2 1116 1244 957 1080 3.99e-12 72.0
Msa0369510 AT2G13370.2 33.846 130 79 2 1116 1244 957 1080 3.99e-12 72.0
Msa0369510 AT2G13370.3 33.846 130 79 2 1116 1244 957 1080 3.99e-12 72.0
Msa0369510 AT2G28290.6 31.847 157 105 2 1130 1285 1102 1257 4.60e-12 71.6
Msa0369510 AT3G57300.1 32.414 145 92 3 1114 1258 1222 1360 4.66e-12 71.6
Msa0369510 AT3G57300.4 32.414 145 92 3 1114 1258 1222 1360 4.66e-12 71.6
Msa0369510 AT2G28290.1 39.623 106 63 1 1130 1235 1101 1205 4.69e-12 71.6
Msa0369510 AT2G28290.5 39.623 106 63 1 1130 1235 1102 1206 4.69e-12 71.6
Msa0369510 AT2G28290.2 31.847 157 105 2 1130 1285 1101 1256 4.88e-12 71.6
Msa0369510 AT2G28290.3 39.623 106 63 1 1130 1235 1101 1205 4.88e-12 71.6
Msa0369510 AT2G28290.4 39.623 106 63 1 1130 1235 1101 1205 4.88e-12 71.6
Msa0369510 AT2G18760.3 38.542 96 58 1 1157 1252 840 934 5.84e-12 71.2
Msa0369510 AT3G57300.2 32.414 145 92 3 1114 1258 1255 1393 5.93e-12 71.2
Msa0369510 AT2G18760.4 38.542 96 58 1 1157 1252 781 875 6.99e-12 70.9
Msa0369510 AT2G18760.1 38.542 96 58 1 1157 1252 781 875 6.99e-12 70.9
Msa0369510 AT2G18760.2 38.542 96 58 1 1157 1252 781 875 6.99e-12 70.9
Msa0369510 AT2G18760.7 38.542 96 58 1 1157 1252 781 875 6.99e-12 70.9
Msa0369510 AT2G18760.5 38.542 96 58 1 1157 1252 781 875 6.99e-12 70.9
Msa0369510 AT2G18760.6 38.542 96 58 1 1157 1252 781 875 6.99e-12 70.9
Msa0369510 AT5G19310.2 28.796 191 123 4 1095 1284 427 605 2.02e-11 69.3
Msa0369510 AT5G19310.1 28.796 191 123 4 1095 1284 691 869 2.36e-11 69.3
Msa0369510 AT5G05130.1 39.362 94 56 1 1143 1235 749 842 4.48e-11 68.2

Find 195 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGGAAGAATCATTGATTT+TGG 0.165047 3_1:+66841909 None:intergenic
TTCTCCTCTTTGTACCTCTT+TGG 0.168701 3_1:+66842407 None:intergenic
ATTAGTCAAATAATGATATT+TGG 0.190711 3_1:+66843755 None:intergenic
TGATGGTGATGGCAAGTTTA+AGG 0.208095 3_1:-66843802 Msa0369510:CDS
TTTAGATTGGATGAAGAAAT+TGG 0.208762 3_1:-66842843 Msa0369510:CDS
CCTCTGAAATTAAGCCTTAT+AGG 0.223041 3_1:-66844373 Msa0369510:CDS
AACAAGACTGTTGGAGAAAA+AGG 0.259687 3_1:-66843331 Msa0369510:CDS
TCATCACTTGATATTGTTGT+AGG 0.263435 3_1:+66843672 None:intergenic
AACCTTGATTTAGTGCTTCT+AGG 0.271299 3_1:+66841675 None:intergenic
ACTATCCCTGGATTCTTTCT+TGG 0.272245 3_1:+66842878 None:intergenic
CATATAAGTTGTTCTCTTGT+AGG 0.274870 3_1:+66843941 None:intergenic
TTATAATCTTCATCAACTTT+TGG 0.276698 3_1:+66842347 None:intergenic
TAGTGATGTCAAACATGTTT+TGG 0.279882 3_1:-66841871 Msa0369510:CDS
GCATAACATTGCTGGCTCTA+TGG 0.281856 3_1:-66842189 Msa0369510:CDS
TCTCCTCTTTGTACCTCTTT+GGG 0.286021 3_1:+66842408 None:intergenic
ACTATCTATTATTTCCTTGC+AGG 0.289125 3_1:+66843419 None:intergenic
TGGTGTTGATGTATTGAATT+TGG 0.296843 3_1:-66843709 Msa0369510:CDS
ACATCAAGTTATCTTCTTGA+TGG 0.297384 3_1:-66843222 Msa0369510:CDS
GCAAAATGGTAAAGAGATTA+TGG 0.302598 3_1:-66840938 Msa0369510:CDS
AGAACTTCATGAACAAATTT+CGG 0.305114 3_1:+66841546 None:intergenic
CTTACTGGAATAGACGTAAA+TGG 0.306756 3_1:+66845171 None:intergenic
ATTCAATGGCGCCCATAAAA+AGG 0.307589 3_1:-66846320 None:intergenic
CAAGATTGTGTATCAAGTTA+TGG 0.313307 3_1:-66844216 Msa0369510:CDS
TCGACCGGGCCAGCAGAAAA+TGG 0.318508 3_1:-66840716 Msa0369510:CDS
CTAATGATATCGACAATGTT+TGG 0.321273 3_1:-66842277 Msa0369510:CDS
TTCTCTGCTTGCCATTTAGA+AGG 0.325243 3_1:+66840580 None:intergenic
CCAAAATCAATGATTCTTCC+TGG 0.329198 3_1:-66841909 Msa0369510:CDS
AACAGCCTCTTGTGTAAAAC+AGG 0.332338 3_1:+66844945 None:intergenic
ATTGATATATCTATGCTATT+AGG 0.336391 3_1:-66845219 Msa0369510:CDS
ACTTCATGTTGTGGATGATA+TGG 0.339055 3_1:-66843580 Msa0369510:CDS
ACATTGTTTCAGAACAATTT+CGG 0.344101 3_1:-66841600 Msa0369510:CDS
TCTGATGAATCCCACCTATA+AGG 0.345661 3_1:+66844359 None:intergenic
CTCAACCTCAAGAGGGTAAC+TGG 0.345817 3_1:+66841212 None:intergenic
AGGGCTTTCTCTCAATGCTT+TGG 0.345836 3_1:+66841728 None:intergenic
AATTCTTCTGAGACTCTTCC+TGG 0.348075 3_1:-66841321 Msa0369510:CDS
AGCAAATTTGATTTGAGAAA+AGG 0.352698 3_1:-66841087 Msa0369510:CDS
GCACTTTGTCATCAGATATT+CGG 0.354010 3_1:-66845296 Msa0369510:CDS
TCAACTTCATGTGATGGCTT+TGG 0.355507 3_1:+66844059 None:intergenic
AAGTATTATGTTGAAGCCTT+TGG 0.358364 3_1:+66844423 None:intergenic
TTGTGGAAGATCCTTCTAAA+TGG 0.362063 3_1:-66840591 Msa0369510:CDS
GAGTGATCAAAAGGTTAATA+AGG 0.362826 3_1:-66843871 Msa0369510:CDS
CTCTATGGAACCATCACTTA+TGG 0.362889 3_1:-66842174 Msa0369510:CDS
TTTCTTTGGCATAACATTGC+TGG 0.370580 3_1:-66842197 Msa0369510:CDS
GAAATGTATCCCTTCCCATT+TGG 0.379249 3_1:+66843548 None:intergenic
ACAGTGCAGTGAAGAAAATA+AGG 0.381838 3_1:-66842384 Msa0369510:CDS
AAGATTGTGTATCAAGTTAT+GGG 0.386679 3_1:-66844215 Msa0369510:CDS
GGAAGAATATCCTGATGATT+TGG 0.399058 3_1:-66843277 Msa0369510:CDS
TCATCAAGTATCAAGATTCC+AGG 0.400291 3_1:+66841708 None:intergenic
GCTCAAAACAAATCTTACTT+TGG 0.400942 3_1:+66841062 None:intergenic
ACAGAAACTACAGAGGAAAA+TGG 0.408346 3_1:-66841244 Msa0369510:CDS
AGTTACTTGAAGTTATTTCC+AGG 0.421538 3_1:-66842065 Msa0369510:CDS
TAATGATATCGACAATGTTT+GGG 0.425400 3_1:-66842276 Msa0369510:CDS
CACAATCTAGATTACTCGTT+GGG 0.425426 3_1:-66844319 Msa0369510:CDS
AGTAATATTCTCAATTCTGT+TGG 0.426455 3_1:+66841630 None:intergenic
AGCATAGATATATCAATTCC+AGG 0.429264 3_1:+66845225 None:intergenic
TCATTAGTCAATGGTTCATC+AGG 0.430750 3_1:+66842293 None:intergenic
GCATTTGAAGCAGTATTGAA+TGG 0.430979 3_1:-66845399 Msa0369510:CDS
AAACTGACATTATTAGTCCT+TGG 0.435671 3_1:-66844187 Msa0369510:CDS
ATATAAGTTGTTCTCTTGTA+GGG 0.439124 3_1:+66843942 None:intergenic
ATTTCTTGTGCAAAGAAGAA+TGG 0.444673 3_1:-66843729 Msa0369510:CDS
TGATGATTTGGATGCCTTGT+GGG 0.445174 3_1:-66843265 Msa0369510:CDS
AAGGTCACGGGTTCAAGTCT+TGG 0.445349 3_1:+66844921 None:intergenic
TCAAGTGATGAAGAAGTTGA+TGG 0.452513 3_1:-66843660 Msa0369510:CDS
GTCGTACACATCAATAAAAC+CGG 0.453824 3_1:+66841350 None:intergenic
AAGAAAAGAAATGATGAGAA+AGG 0.454786 3_1:+66842091 None:intergenic
TTGACATCACTAGAAGGTCT+TGG 0.457036 3_1:+66841882 None:intergenic
GGTGTCGTCGAACTTGAACC+TGG 0.461275 3_1:+66841930 None:intergenic
GTTAACTTATATGATGATCA+AGG 0.462568 3_1:-66844518 Msa0369510:CDS
CATGATTATGAAGAATGAAA+AGG 0.465758 3_1:-66840500 Msa0369510:CDS
CTCTTGTGTAAAACAGGGTA+AGG 0.466337 3_1:+66844951 None:intergenic
CATGGCCGTCGAACCTCTCC+AGG 0.467950 3_1:-66841948 Msa0369510:CDS
CACAAGGCATCCAAATCATC+AGG 0.468278 3_1:+66843267 None:intergenic
ATCAAAAGCTCAACCTCAAG+AGG 0.468504 3_1:+66841204 None:intergenic
CATGAAGAACAAGATCATAA+AGG 0.469713 3_1:-66843465 Msa0369510:CDS
ACATCAAATTGAGAAACAAT+AGG 0.472158 3_1:+66844119 None:intergenic
ATATCACATGCTCCTGGAGC+AGG 0.473334 3_1:-66842119 Msa0369510:CDS
TCTTTAAAGAGAAGATAAAG+AGG 0.473356 3_1:-66843608 Msa0369510:CDS
GATTGAAGATGATATACTTA+GGG 0.473462 3_1:-66840557 Msa0369510:CDS
AGATTGAAGATGATATACTT+AGG 0.475140 3_1:-66840558 Msa0369510:CDS
ACACAACCTACGTAACGTTC+AGG 0.477670 3_1:+66844002 None:intergenic
CTAGAAGGTCTTGGAAATCC+AGG 0.479150 3_1:+66841891 None:intergenic
ACACCCTAGTGTTCTTGTCA+TGG 0.484111 3_1:-66841817 Msa0369510:CDS
AGGACTAGAGGTCGTTTCCC+TGG 0.486339 3_1:+66842047 None:intergenic
TTCCTTGCAGGCATCAGCGT+TGG 0.488224 3_1:+66843431 None:intergenic
CACCCTAGTGTTCTTGTCAT+GGG 0.490664 3_1:-66841816 Msa0369510:CDS
CTGGAGAGGTTCGACGGCCA+TGG 0.491604 3_1:+66841949 None:intergenic
GTGCCGGTTTATCTTATCCA+TGG 0.492001 3_1:-66841966 Msa0369510:CDS
TTACGATAATTAGCATCAAA+TGG 0.492300 3_1:+66846276 None:intergenic
ACAGTAGGCTCTTCTTCAGT+TGG 0.493427 3_1:+66843372 None:intergenic
GAGCTAGACTTGTTTGAAAG+AGG 0.495712 3_1:-66840904 Msa0369510:CDS
AAAGAGATTATGGTACTAAC+GGG 0.497650 3_1:-66840928 Msa0369510:CDS
TATTATGTTGAAGCCTTTGG+AGG 0.500254 3_1:+66844426 None:intergenic
TTGTCGATATCATTAGTCAA+TGG 0.500652 3_1:+66842284 None:intergenic
TGGTGGTAAGAGTGATCAAA+AGG 0.501525 3_1:-66843880 Msa0369510:CDS
ATCATGTTCACAACTATCCC+TGG 0.505981 3_1:+66842866 None:intergenic
AAGCAGTATTGAATGGATCA+TGG 0.507736 3_1:-66845392 Msa0369510:CDS
AAAATGGAAGATTCCTGTGC+CGG 0.511195 3_1:-66841982 Msa0369510:CDS
TATTGATGAGGAGAAGATGC+AGG 0.512826 3_1:-66841400 Msa0369510:CDS
AAGCCATCACATGAAGTTGA+AGG 0.513509 3_1:-66844056 Msa0369510:CDS
CAGATATTCGGATAAGATCA+AGG 0.513601 3_1:-66845284 Msa0369510:CDS
TTCAGTATCAATGAAACGTA+AGG 0.514290 3_1:+66845329 None:intergenic
ACTTCATGTGATGGCTTTGG+TGG 0.514522 3_1:+66844062 None:intergenic
CTTCAACATAATACTTGTGA+AGG 0.515406 3_1:-66844416 Msa0369510:CDS
TCAATCAATGCTTGTGCTGA+AGG 0.515842 3_1:-66840826 Msa0369510:CDS
AACACAGCCACCACTTGAGT+TGG 0.516402 3_1:+66842142 None:intergenic
GAAGAACTACTTGGAAAGAG+TGG 0.517977 3_1:-66840642 Msa0369510:CDS
AGGTTGTGTTGTTGAGAAGT+TGG 0.518892 3_1:-66843988 Msa0369510:CDS
CGGCCATGGATAAGATAAAC+CGG 0.521874 3_1:+66841963 None:intergenic
TTCACAACATTTATAAGCCA+AGG 0.522728 3_1:+66844170 None:intergenic
AACTCTATTAAGAATCTCAC+AGG 0.523720 3_1:+66840982 None:intergenic
GTTACTGACGACCGGGTCGA+TGG 0.527013 3_1:-66840680 Msa0369510:CDS
CTGATACCAAGAAAGAATCC+AGG 0.527093 3_1:-66842884 Msa0369510:CDS
GTGTATCAGTTACTGACGAC+CGG 0.528339 3_1:-66840688 Msa0369510:CDS
GTTACTTGAAGTTATTTCCA+GGG 0.528637 3_1:-66842064 Msa0369510:CDS
ACATGTTTGACATCACTAGA+AGG 0.528845 3_1:+66841876 None:intergenic
AAGCCTTCAACTTCATGTGA+TGG 0.530172 3_1:+66844053 None:intergenic
TACAATCTCATGCTGTTCAT+CGG 0.532890 3_1:+66841266 None:intergenic
CTCAGAAATGTCTCGTATTG+CGG 0.533698 3_1:+66842788 None:intergenic
AGATGATATACTTAGGGAGA+TGG 0.537029 3_1:-66840551 Msa0369510:CDS
GTTGTTGAGAAGTTGGAAGT+TGG 0.537957 3_1:-66843981 Msa0369510:CDS
CTCTTCTTCAGATTCAGAAG+AGG 0.540428 3_1:-66843904 Msa0369510:CDS
ATCCTAGAAGCACTAAATCA+AGG 0.543534 3_1:-66841677 Msa0369510:CDS
AGCTAGACTTGTTTGAAAGA+GGG 0.545005 3_1:-66840903 Msa0369510:CDS
TGTGTTATATCACATGCTCC+TGG 0.545385 3_1:-66842125 Msa0369510:CDS
AAATTGACATGAACATTGAT+CGG 0.547067 3_1:+66844544 None:intergenic
GGAATCTTGATACTTGATGA+AGG 0.550715 3_1:-66841705 Msa0369510:CDS
ATCCAACGCTGATGCCTGCA+AGG 0.554717 3_1:-66843433 Msa0369510:CDS
TTCCGCTTCTCATTTACAGT+AGG 0.555775 3_1:+66843357 None:intergenic
TCTTCAGATTCAGAAGAGGA+TGG 0.556076 3_1:-66843900 Msa0369510:CDS
TGGATAAGATAAACCGGCAC+AGG 0.556571 3_1:+66841969 None:intergenic
ATAAGTATAGAAGAACTACT+TGG 0.563508 3_1:-66840651 Msa0369510:CDS
TAAAGAGATTATGGTACTAA+CGG 0.563657 3_1:-66840929 Msa0369510:CDS
GATGTATTGAATTTGGAGTA+CGG 0.563713 3_1:-66843702 Msa0369510:CDS
AAGAACTACTTGGAAAGAGT+GGG 0.567137 3_1:-66840641 Msa0369510:CDS
GCGGAAGGAAACAAGACTGT+TGG 0.570396 3_1:-66843340 Msa0369510:CDS
TATGATGATCAAGGTTCACT+TGG 0.572239 3_1:-66844509 Msa0369510:CDS
TGAAATTAAGCCTTATAGGT+GGG 0.572501 3_1:-66844369 Msa0369510:CDS
CACTTGGATCAATACATCCA+TGG 0.573583 3_1:-66841179 Msa0369510:CDS
CCTATAAGGCTTAATTTCAG+AGG 0.573942 3_1:+66844373 None:intergenic
GATTCTAAATACCGAAGGAA+AGG 0.574058 3_1:-66841513 Msa0369510:CDS
TTTATTGATGTGTACGACAG+TGG 0.574824 3_1:-66841345 Msa0369510:CDS
CATCAAGTATCAAGATTCCA+GGG 0.577717 3_1:+66841709 None:intergenic
GAGTACCAGTTACCCTCTTG+AGG 0.579454 3_1:-66841217 Msa0369510:CDS
TCACAATCTAGATTACTCGT+TGG 0.580048 3_1:-66844320 Msa0369510:CDS
CAACTTTACTAGTTGCGCCA+AGG 0.580993 3_1:-66844883 Msa0369510:intron
ACTTAGGGAGATGGTTGAAG+AGG 0.582988 3_1:-66840542 Msa0369510:CDS
GCTTGCGACGTTCGAAACGT+AGG 0.587148 3_1:-66844034 Msa0369510:CDS
GAAGCACTAAATCAAGGTTG+AGG 0.587727 3_1:-66841671 Msa0369510:CDS
ATTGTTCTGAAACAATGTGC+CGG 0.589502 3_1:+66841605 None:intergenic
TGATACCAAGAAAGAATCCA+GGG 0.590473 3_1:-66842883 Msa0369510:CDS
TTGAACCTGGAGAGGTTCGA+CGG 0.591619 3_1:+66841943 None:intergenic
CTGATGATTTGGATGCCTTG+TGG 0.592293 3_1:-66843266 Msa0369510:CDS
AGCCTACTGTAAATGAGAAG+CGG 0.593553 3_1:-66843359 Msa0369510:CDS
TAGCCCATGACAAGAACACT+AGG 0.596138 3_1:+66841813 None:intergenic
TCATGTGACTGAAAGGTCAC+GGG 0.600522 3_1:+66844909 None:intergenic
CTGAAATTAAGCCTTATAGG+TGG 0.602209 3_1:-66844370 Msa0369510:CDS
CTTATCTTCTTCCATCGACC+CGG 0.602308 3_1:+66840669 None:intergenic
GTCATGTGACTGAAAGGTCA+CGG 0.605109 3_1:+66844908 None:intergenic
GAAAGAACGTCATTTGCTTG+AGG 0.606173 3_1:-66841475 Msa0369510:CDS
TCTAAATACCGAAGGAAAGG+CGG 0.606320 3_1:-66841510 Msa0369510:CDS
ATTCGAACACAGAAAATACA+TGG 0.608984 3_1:-66841751 Msa0369510:CDS
TCGAGTTATTTGTCTAACAG+AGG 0.609980 3_1:-66843495 Msa0369510:CDS
AAAGCATTGAGAGAAAGCCC+TGG 0.610887 3_1:-66841726 Msa0369510:CDS
GTTGTTGTCATGTGACTGAA+AGG 0.616439 3_1:+66844902 None:intergenic
AATGTATAGATTTGTAAACC+AGG 0.619375 3_1:+66841303 None:intergenic
TTAAGAATCTCACAGGTGCA+AGG 0.619647 3_1:+66840989 None:intergenic
TGTATTCATTTCTTCCCACA+AGG 0.620617 3_1:+66843251 None:intergenic
CGTCGAACTTGAACCTGGAG+AGG 0.620998 3_1:+66841935 None:intergenic
GAATTGAGAATATTACTCTC+CGG 0.621894 3_1:-66841624 Msa0369510:CDS
GAGGAAGAGACTTCATGTTG+TGG 0.623646 3_1:-66843589 Msa0369510:CDS
TACTGTAAATGAGAAGCGGA+AGG 0.625752 3_1:-66843355 Msa0369510:CDS
GGAATCTACTGCCTTCGATG+TGG 0.627188 3_1:-66842822 Msa0369510:CDS
TTTGAGCCTAATCTCACGAG+TGG 0.632989 3_1:-66841046 Msa0369510:CDS
TCAAGGTTCACTTGGTACAG+AGG 0.634309 3_1:-66844501 Msa0369510:CDS
AGTTAGATTCTAAATACCGA+AGG 0.636709 3_1:-66841518 Msa0369510:CDS
AGTATCGAAAAGCAATGATG+AGG 0.640512 3_1:-66843298 Msa0369510:CDS
AAGCTATTAATGTGAGCACA+AGG 0.641563 3_1:-66843836 Msa0369510:CDS
GTCTTCGCAAGATACAGAAG+TGG 0.643128 3_1:-66841845 Msa0369510:CDS
ATAGCAGGGTTCAACTGCTG+AGG 0.645924 3_1:-66842913 Msa0369510:intron
AATTAACTCAGATATTGATG+AGG 0.647649 3_1:-66841412 Msa0369510:CDS
AAATTTGAAGATCAAAGCAG+CGG 0.654526 3_1:-66840868 Msa0369510:CDS
ATTGATGAGGAGAAGATGCA+GGG 0.655538 3_1:-66841399 Msa0369510:CDS
TGTATCAGTTACTGACGACC+GGG 0.657785 3_1:-66840687 Msa0369510:CDS
GAATGGATCATGGCAACCTG+TGG 0.660516 3_1:-66845382 Msa0369510:CDS
TCAAAAGCTCAACCTCAAGA+GGG 0.663408 3_1:+66841205 None:intergenic
TCAGATTCAGAAGAGGATGG+TGG 0.664458 3_1:-66843897 Msa0369510:CDS
GATAGGTGGAATGCCCAAAG+AGG 0.668768 3_1:-66842421 Msa0369510:intron
ATGCCCAAAGAGGTACAAAG+AGG 0.679372 3_1:-66842411 Msa0369510:CDS
TTATCTTCTTGATGGAACCG+CGG 0.688834 3_1:-66843214 Msa0369510:intron
GAAGAACAAGATCATAAAGG+CGG 0.691605 3_1:-66843462 Msa0369510:CDS
GAACATTGATCGGATTTGTG+AGG 0.698234 3_1:+66844554 None:intergenic
AGCCCATGACAAGAACACTA+GGG 0.709112 3_1:+66841814 None:intergenic
GTACAGCCTGAACGTTACGT+AGG 0.720601 3_1:-66844008 Msa0369510:CDS
ACAGCCTCTTGTGTAAAACA+GGG 0.731493 3_1:+66844946 None:intergenic
AGATTGTACAGAAACTACAG+AGG 0.767273 3_1:-66841251 Msa0369510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATATATAGTAATAAAATTA+AGG + chr3_1:66840564-66840583 None:intergenic 10.0%
!!! AATTAATACATTTTAATTAC+AGG - chr3_1:66841238-66841257 Msa0369510:CDS 10.0%
!! TAATTTCTTGATAAAAAAAA+AGG - chr3_1:66841720-66841739 Msa0369510:CDS 10.0%
!! AATTTCTTGATAAAAAAAAA+GGG - chr3_1:66841721-66841740 Msa0369510:CDS 10.0%
!! AAAAAAAATAATATCAAGAA+AGG + chr3_1:66841954-66841973 None:intergenic 10.0%
!! TATATATAAATTAAGTTATC+AGG + chr3_1:66844358-66844377 None:intergenic 10.0%
!! CTTAATTTATATATAATGAT+AGG - chr3_1:66844363-66844382 Msa0369510:CDS 10.0%
!! AAAATATGAATAATCATCAA+TGG - chr3_1:66840610-66840629 Msa0369510:CDS 15.0%
!! TATACAATAAATATCAAGAT+TGG + chr3_1:66841130-66841149 None:intergenic 15.0%
!!! AATTACATCTTTTTTAAAGA+AGG - chr3_1:66842534-66842553 Msa0369510:intron 15.0%
!! ATTAGTCAAATAATGATATT+TGG + chr3_1:66843049-66843068 None:intergenic 15.0%
!!! TTTTTTTGTCTTCTTTTATA+AGG - chr3_1:66843842-66843861 Msa0369510:CDS 15.0%
!!! TTTTATATTTGACTTACAAA+TGG + chr3_1:66844039-66844058 None:intergenic 15.0%
!! AATTTATATATAATGATAGG+TGG - chr3_1:66844366-66844385 Msa0369510:CDS 15.0%
!! TGTATACTTGATAAATTTGT+TGG - chr3_1:66840799-66840818 Msa0369510:CDS 20.0%
!! TGATTTAATTCAACATTTGT+TGG - chr3_1:66840955-66840974 Msa0369510:CDS 20.0%
!!! TTGTTATTTTTCATTTGACT+TGG - chr3_1:66841014-66841033 Msa0369510:CDS 20.0%
!!! TGGTTTTTCTAAGAAAAAAT+TGG + chr3_1:66841106-66841125 None:intergenic 20.0%
!! AGAAAATAAATAGTAGTTCT+AGG + chr3_1:66841268-66841287 None:intergenic 20.0%
!!! TGTTTTGAAATAAGAATTAG+GGG + chr3_1:66841382-66841401 None:intergenic 20.0%
!!! CTGTTTTGAAATAAGAATTA+GGG + chr3_1:66841383-66841402 None:intergenic 20.0%
!! ATTGATATATCTATGCTATT+AGG - chr3_1:66841582-66841601 Msa0369510:CDS 20.0%
!! AATAAAAAGTTTGAACTTAC+TGG + chr3_1:66841648-66841667 None:intergenic 20.0%
!!! GATGTATTTTATGATTATGA+TGG - chr3_1:66842700-66842719 Msa0369510:intron 20.0%
!!! TTTTAAACTTTTTACACCAA+CGG + chr3_1:66843672-66843691 None:intergenic 20.0%
!!! TGTAAAAAGTTTAAAACTGT+CGG - chr3_1:66843676-66843695 Msa0369510:CDS 20.0%
!! ACAAAATATCTAACCAAATA+AGG + chr3_1:66844309-66844328 None:intergenic 20.0%
!!! TTATAATCTTCATCAACTTT+TGG + chr3_1:66844457-66844476 None:intergenic 20.0%
!!! AAAAAGCTTTTGAATTTCTT+TGG - chr3_1:66844590-66844609 Msa0369510:CDS 20.0%
!!! TTTTTGAGAAATATTTTCAG+TGG - chr3_1:66845841-66845860 Msa0369510:intron 20.0%
! TTACGATAATTAGCATCAAA+TGG + chr3_1:66840528-66840547 None:intergenic 25.0%
! TTAATCTAACAATCTATAGC+CGG + chr3_1:66840725-66840744 None:intergenic 25.0%
! CAATAAATATCAAGATTGGA+TGG + chr3_1:66841126-66841145 None:intergenic 25.0%
!! ATAAACCATGATTTTGAATG+TGG - chr3_1:66841178-66841197 Msa0369510:CDS 25.0%
! TGAATGAGAACATGAAATTA+TGG + chr3_1:66841326-66841345 None:intergenic 25.0%
!!! GCTGTTTTGAAATAAGAATT+AGG + chr3_1:66841384-66841403 None:intergenic 25.0%
! AACTTCATTTCTTAGTAAAC+TGG - chr3_1:66841669-66841688 Msa0369510:CDS 25.0%
! AATAATATCAAGAAAGGTCA+CGG + chr3_1:66841948-66841967 None:intergenic 25.0%
! GAAAATCCAAGTTCAAATTA+TGG + chr3_1:66842066-66842085 None:intergenic 25.0%
! CAAATGTGATTTATTTCAAG+TGG + chr3_1:66842117-66842136 None:intergenic 25.0%
! AAATTGACATGAACATTGAT+CGG + chr3_1:66842260-66842279 None:intergenic 25.0%
! GTTAACTTATATGATGATCA+AGG - chr3_1:66842283-66842302 Msa0369510:CDS 25.0%
! GGTAAAAACTCTTAATAAAG+AGG - chr3_1:66842321-66842340 Msa0369510:CDS 25.0%
! AAGATTGTGTATCAAGTTAT+GGG - chr3_1:66842586-66842605 Msa0369510:intron 25.0%
! ACATCAAATTGAGAAACAAT+AGG + chr3_1:66842685-66842704 None:intergenic 25.0%
! ATATAAGTTGTTCTCTTGTA+GGG + chr3_1:66842862-66842881 None:intergenic 25.0%
! ACAAGGAACAAAAATTATGA+TGG - chr3_1:66842982-66843001 Msa0369510:intron 25.0%
!! AACAAAAATTATGATGGTGA+TGG - chr3_1:66842988-66843007 Msa0369510:intron 25.0%
!! TCTTTAAAGAGAAGATAAAG+AGG - chr3_1:66843193-66843212 Msa0369510:intron 25.0%
!! ATATGGATTTTCAAACCAAA+TGG - chr3_1:66843238-66843257 Msa0369510:CDS 25.0%
!! TATGGATTTTCAAACCAAAT+GGG - chr3_1:66843239-66843258 Msa0369510:CDS 25.0%
!! TTTAAAGTCACACATACAAT+TGG + chr3_1:66843712-66843731 None:intergenic 25.0%
! AATGATGTGACAATTATGAT+TGG - chr3_1:66843761-66843780 Msa0369510:CDS 25.0%
!! TTGTGAACATGATTTTAGAT+TGG - chr3_1:66843945-66843964 Msa0369510:CDS 25.0%
! TTTAGATTGGATGAAGAAAT+TGG - chr3_1:66843958-66843977 Msa0369510:CDS 25.0%
! TTAACTGTATTCTCCTTATT+TGG - chr3_1:66844293-66844312 Msa0369510:CDS 25.0%
! TAATGATATCGACAATGTTT+GGG - chr3_1:66844525-66844544 Msa0369510:CDS 25.0%
!!! GAAATTCAAAAGCTTTTTTC+TGG + chr3_1:66844588-66844607 None:intergenic 25.0%
! AAGAAAAGAAATGATGAGAA+AGG + chr3_1:66844713-66844732 None:intergenic 25.0%
! AGTAATATTCTCAATTCTGT+TGG + chr3_1:66845174-66845193 None:intergenic 25.0%
! ACATTGTTTCAGAACAATTT+CGG - chr3_1:66845201-66845220 Msa0369510:CDS 25.0%
! AGAACTTCATGAACAAATTT+CGG + chr3_1:66845258-66845277 None:intergenic 25.0%
! AATTAACTCAGATATTGATG+AGG - chr3_1:66845389-66845408 Msa0369510:CDS 25.0%
! AATGTATAGATTTGTAAACC+AGG + chr3_1:66845501-66845520 None:intergenic 25.0%
!!! AGCAAATTTGATTTGAGAAA+AGG - chr3_1:66845714-66845733 Msa0369510:intron 25.0%
!! AAATATTTTCAGTGGCAAAA+TGG - chr3_1:66845849-66845868 Msa0369510:intron 25.0%
! TAAAGAGATTATGGTACTAA+CGG - chr3_1:66845872-66845891 Msa0369510:intron 25.0%
! ATAAGTATAGAAGAACTACT+TGG - chr3_1:66846150-66846169 Msa0369510:intron 25.0%
! AGATTGAAGATGATATACTT+AGG - chr3_1:66846243-66846262 Msa0369510:intron 25.0%
! GATTGAAGATGATATACTTA+GGG - chr3_1:66846244-66846263 Msa0369510:intron 25.0%
! CATGATTATGAAGAATGAAA+AGG - chr3_1:66846301-66846320 Msa0369510:CDS 25.0%
! TGATGCAAATGCCTTTTTAT+GGG + chr3_1:66840495-66840514 None:intergenic 30.0%
! TTGATGCAAATGCCTTTTTA+TGG + chr3_1:66840496-66840515 None:intergenic 30.0%
!! TAAAAAGGCATTTGCATCAA+TGG - chr3_1:66840496-66840515 Msa0369510:CDS 30.0%
! ATCATTTGTTGCATTCATCA+TGG + chr3_1:66840681-66840700 None:intergenic 30.0%
!!! TCTATTTTTAAGAGTTCCAC+AGG + chr3_1:66841438-66841457 None:intergenic 30.0%
GAACTCTTAAAAATAGAGTC+AGG - chr3_1:66841441-66841460 Msa0369510:CDS 30.0%
TTCAGTATCAATGAAACGTA+AGG + chr3_1:66841475-66841494 None:intergenic 30.0%
AGCATAGATATATCAATTCC+AGG + chr3_1:66841579-66841598 None:intergenic 30.0%
ATAATATCAAGAAAGGTCAC+GGG + chr3_1:66841947-66841966 None:intergenic 30.0%
TTCTAGCCATAATTTGAACT+TGG - chr3_1:66842057-66842076 Msa0369510:CDS 30.0%
TCAAGTGGTTAATTCAGTTA+AGG + chr3_1:66842102-66842121 None:intergenic 30.0%
AAAGAGATAAATATCAAGCC+AGG + chr3_1:66842177-66842196 None:intergenic 30.0%
CTCTTTGTAAAATGTAGATG+TGG - chr3_1:66842191-66842210 Msa0369510:CDS 30.0%
! ATCAAATTTTCATCCTCCAA+AGG - chr3_1:66842362-66842381 Msa0369510:CDS 30.0%
AAGTATTATGTTGAAGCCTT+TGG + chr3_1:66842381-66842400 None:intergenic 30.0%
CTTCAACATAATACTTGTGA+AGG - chr3_1:66842385-66842404 Msa0369510:CDS 30.0%
! TGAAATTAAGCCTTATAGGT+GGG - chr3_1:66842432-66842451 Msa0369510:intron 30.0%
! AATTTTCATCTGATCTTTCG+TGG - chr3_1:66842506-66842525 Msa0369510:intron 30.0%
! TGTTTTGCACAGATCTTATA+TGG + chr3_1:66842567-66842586 None:intergenic 30.0%
CAAGATTGTGTATCAAGTTA+TGG - chr3_1:66842585-66842604 Msa0369510:intron 30.0%
AAACTGACATTATTAGTCCT+TGG - chr3_1:66842614-66842633 Msa0369510:intron 30.0%
TTCACAACATTTATAAGCCA+AGG + chr3_1:66842634-66842653 None:intergenic 30.0%
TGTGAACTTCAGCTTAAAAA+AGG - chr3_1:66842648-66842667 Msa0369510:intron 30.0%
CATATAAGTTGTTCTCTTGT+AGG + chr3_1:66842863-66842882 None:intergenic 30.0%
GAGTGATCAAAAGGTTAATA+AGG - chr3_1:66842930-66842949 Msa0369510:intron 30.0%
ATTTCTTGTGCAAAGAAGAA+TGG - chr3_1:66843072-66843091 Msa0369510:intron 30.0%
!! TGGTGTTGATGTATTGAATT+TGG - chr3_1:66843092-66843111 Msa0369510:intron 30.0%
! GATGTATTGAATTTGGAGTA+CGG - chr3_1:66843099-66843118 Msa0369510:intron 30.0%
TCATCACTTGATATTGTTGT+AGG + chr3_1:66843132-66843151 None:intergenic 30.0%
! ATTTTCAAACCAAATGGGAA+GGG - chr3_1:66843244-66843263 Msa0369510:CDS 30.0%
! CTCGAATGAAAATTTTCTGT+TGG + chr3_1:66843291-66843310 None:intergenic 30.0%
CATGAAGAACAAGATCATAA+AGG - chr3_1:66843336-66843355 Msa0369510:CDS 30.0%
ACTATCTATTATTTCCTTGC+AGG + chr3_1:66843385-66843404 None:intergenic 30.0%
ACATCAAGTTATCTTCTTGA+TGG - chr3_1:66843579-66843598 Msa0369510:CDS 30.0%
!!! GTTTATTTTTGTTACACCGT+TGG - chr3_1:66843653-66843672 Msa0369510:CDS 30.0%
TGATTCAGTTCAAATATAGC+AGG - chr3_1:66843873-66843892 Msa0369510:CDS 30.0%
GATTCAGTTCAAATATAGCA+GGG - chr3_1:66843874-66843893 Msa0369510:CDS 30.0%
!! ATTTTAGTCCCTCATTTTGT+TGG - chr3_1:66844081-66844100 Msa0369510:CDS 30.0%
CAACATATCCAACAAAATGA+GGG + chr3_1:66844092-66844111 None:intergenic 30.0%
ACAACATATCCAACAAAATG+AGG + chr3_1:66844093-66844112 None:intergenic 30.0%
TACAAAATGCTGTCAAATAG+CGG - chr3_1:66844191-66844210 Msa0369510:CDS 30.0%
AATCGTGAATCACGAAAAAT+AGG + chr3_1:66844252-66844271 None:intergenic 30.0%
TTGTCGATATCATTAGTCAA+TGG + chr3_1:66844520-66844539 None:intergenic 30.0%
CTAATGATATCGACAATGTT+TGG - chr3_1:66844524-66844543 Msa0369510:CDS 30.0%
! GATTTTTCTTCCATAAGTGA+TGG + chr3_1:66844640-66844659 None:intergenic 30.0%
! AGTTACTTGAAGTTATTTCC+AGG - chr3_1:66844736-66844755 Msa0369510:intron 30.0%
! GTTACTTGAAGTTATTTCCA+GGG - chr3_1:66844737-66844756 Msa0369510:intron 30.0%
! TAGTGATGTCAAACATGTTT+TGG - chr3_1:66844930-66844949 Msa0369510:CDS 30.0%
ATTCGAACACAGAAAATACA+TGG - chr3_1:66845050-66845069 Msa0369510:intron 30.0%
GAATTGAGAATATTACTCTC+CGG - chr3_1:66845177-66845196 Msa0369510:CDS 30.0%
AGTTAGATTCTAAATACCGA+AGG - chr3_1:66845283-66845302 Msa0369510:CDS 30.0%
!!! ATGTGCAACTAAGTTTTTTG+CGG - chr3_1:66845665-66845684 Msa0369510:intron 30.0%
GCTCAAAACAAATCTTACTT+TGG + chr3_1:66845742-66845761 None:intergenic 30.0%
AACTCTATTAAGAATCTCAC+AGG + chr3_1:66845822-66845841 None:intergenic 30.0%
GCAAAATGGTAAAGAGATTA+TGG - chr3_1:66845863-66845882 Msa0369510:intron 30.0%
AAAGAGATTATGGTACTAAC+GGG - chr3_1:66845873-66845892 Msa0369510:intron 30.0%
AAATTTGAAGATCAAAGCAG+CGG - chr3_1:66845933-66845952 Msa0369510:intron 30.0%
!!! ATAGCTTGCTTTGTTTTTGA+AGG + chr3_1:66846053-66846072 None:intergenic 30.0%
GCTTATAAAGTTAGCTGCAA+AGG - chr3_1:66840762-66840781 Msa0369510:CDS 35.0%
GACATAAACCAAACCTAGAA+GGG + chr3_1:66840984-66841003 None:intergenic 35.0%
AGACATAAACCAAACCTAGA+AGG + chr3_1:66840985-66841004 None:intergenic 35.0%
! TGCTCTAACTAGTTTCTACA+AGG + chr3_1:66841298-66841317 None:intergenic 35.0%
! GCATTTGAAGCAGTATTGAA+TGG - chr3_1:66841402-66841421 Msa0369510:CDS 35.0%
! AAGCAGTATTGAATGGATCA+TGG - chr3_1:66841409-66841428 Msa0369510:CDS 35.0%
GCACTTTGTCATCAGATATT+CGG - chr3_1:66841505-66841524 Msa0369510:CDS 35.0%
CAGATATTCGGATAAGATCA+AGG - chr3_1:66841517-66841536 Msa0369510:CDS 35.0%
CTTACTGGAATAGACGTAAA+TGG + chr3_1:66841633-66841652 None:intergenic 35.0%
GATAAAAAAAAAGGGCAACC+CGG - chr3_1:66841729-66841748 Msa0369510:CDS 35.0%
CAGTTAAGGACAAATCATTC+AGG + chr3_1:66842088-66842107 None:intergenic 35.0%
TAAATATCAAGCCAGGTGTT+TGG + chr3_1:66842170-66842189 None:intergenic 35.0%
TATGATGATCAAGGTTCACT+TGG - chr3_1:66842292-66842311 Msa0369510:CDS 35.0%
TATTATGTTGAAGCCTTTGG+AGG + chr3_1:66842378-66842397 None:intergenic 35.0%
CCTATAAGGCTTAATTTCAG+AGG + chr3_1:66842431-66842450 None:intergenic 35.0%
!! CCTCTGAAATTAAGCCTTAT+AGG - chr3_1:66842428-66842447 Msa0369510:intron 35.0%
! CTGAAATTAAGCCTTATAGG+TGG - chr3_1:66842431-66842450 Msa0369510:intron 35.0%
TCACAATCTAGATTACTCGT+TGG - chr3_1:66842481-66842500 Msa0369510:intron 35.0%
CACAATCTAGATTACTCGTT+GGG - chr3_1:66842482-66842501 Msa0369510:intron 35.0%
AAGCTATTAATGTGAGCACA+AGG - chr3_1:66842965-66842984 Msa0369510:intron 35.0%
TCAAGTGATGAAGAAGTTGA+TGG - chr3_1:66843141-66843160 Msa0369510:intron 35.0%
ACTTCATGTTGTGGATGATA+TGG - chr3_1:66843221-66843240 Msa0369510:CDS 35.0%
! GATTTTCAAACCAAATGGGA+AGG - chr3_1:66843243-66843262 Msa0369510:CDS 35.0%
TCGAGTTATTTGTCTAACAG+AGG - chr3_1:66843306-66843325 Msa0369510:CDS 35.0%
GAAGAACAAGATCATAAAGG+CGG - chr3_1:66843339-66843358 Msa0369510:CDS 35.0%
AACAAGACTGTTGGAGAAAA+AGG - chr3_1:66843470-66843489 Msa0369510:CDS 35.0%
! AGTATCGAAAAGCAATGATG+AGG - chr3_1:66843503-66843522 Msa0369510:CDS 35.0%
GGAAGAATATCCTGATGATT+TGG - chr3_1:66843524-66843543 Msa0369510:CDS 35.0%
TGTATTCATTTCTTCCCACA+AGG + chr3_1:66843553-66843572 None:intergenic 35.0%
TGATACCAAGAAAGAATCCA+GGG - chr3_1:66843918-66843937 Msa0369510:CDS 35.0%
! TTTTCACAAATCCACATCGA+AGG + chr3_1:66843993-66844012 None:intergenic 35.0%
GTTATCAGGTAGATTCATAC+TGG + chr3_1:66844344-66844363 None:intergenic 35.0%
ACAGTGCAGTGAAGAAAATA+AGG - chr3_1:66844417-66844436 Msa0369510:CDS 35.0%
TCATTAGTCAATGGTTCATC+AGG + chr3_1:66844511-66844530 None:intergenic 35.0%
!! TGCATCTTTTCTTCAAGTTC+AGG + chr3_1:66844559-66844578 None:intergenic 35.0%
TTTCTTTGGCATAACATTGC+TGG - chr3_1:66844604-66844623 Msa0369510:intron 35.0%
GAAGAAAAATCCAACTCAAG+TGG - chr3_1:66844649-66844668 Msa0369510:intron 35.0%
GGCGAAAAGAGTTCAAAAAA+TGG - chr3_1:66844803-66844822 Msa0369510:intron 35.0%
!!! CCAGGAAGAATCATTGATTT+TGG + chr3_1:66844895-66844914 None:intergenic 35.0%
CCAAAATCAATGATTCTTCC+TGG - chr3_1:66844892-66844911 Msa0369510:CDS 35.0%
ACATGTTTGACATCACTAGA+AGG + chr3_1:66844928-66844947 None:intergenic 35.0%
CATCAAGTATCAAGATTCCA+GGG + chr3_1:66845095-66845114 None:intergenic 35.0%
TCATCAAGTATCAAGATTCC+AGG + chr3_1:66845096-66845115 None:intergenic 35.0%
GGAATCTTGATACTTGATGA+AGG - chr3_1:66845096-66845115 Msa0369510:intron 35.0%
!! ATCCTAGAAGCACTAAATCA+AGG - chr3_1:66845124-66845143 Msa0369510:intron 35.0%
AACCTTGATTTAGTGCTTCT+AGG + chr3_1:66845129-66845148 None:intergenic 35.0%
!! ATTGTTCTGAAACAATGTGC+CGG + chr3_1:66845199-66845218 None:intergenic 35.0%
GATTCTAAATACCGAAGGAA+AGG - chr3_1:66845288-66845307 Msa0369510:CDS 35.0%
GTCGTACACATCAATAAAAC+CGG + chr3_1:66845454-66845473 None:intergenic 35.0%
TTTATTGATGTGTACGACAG+TGG - chr3_1:66845456-66845475 Msa0369510:intron 35.0%
TACAATCTCATGCTGTTCAT+CGG + chr3_1:66845538-66845557 None:intergenic 35.0%
AGATTGTACAGAAACTACAG+AGG - chr3_1:66845550-66845569 Msa0369510:intron 35.0%
ACAGAAACTACAGAGGAAAA+TGG - chr3_1:66845557-66845576 Msa0369510:intron 35.0%
!! GTTGAGCTTTTGATAACACT+TGG - chr3_1:66845606-66845625 Msa0369510:intron 35.0%
ACGAGTGGTGAAAAATGAAA+AGG - chr3_1:66845770-66845789 Msa0369510:intron 35.0%
! AGCTAGACTTGTTTGAAAGA+GGG - chr3_1:66845898-66845917 Msa0369510:intron 35.0%
!!! AGCTTCTAGAGTGATTTTTC+TGG - chr3_1:66846013-66846032 Msa0369510:intron 35.0%
! ACACATAAACCATTTTCTGC+TGG + chr3_1:66846097-66846116 None:intergenic 35.0%
AAGAACTACTTGGAAAGAGT+GGG - chr3_1:66846160-66846179 Msa0369510:intron 35.0%
! TTCTTGCATGATTTTCAGTG+AGG - chr3_1:66846184-66846203 Msa0369510:intron 35.0%
TTGTGGAAGATCCTTCTAAA+TGG - chr3_1:66846210-66846229 Msa0369510:intron 35.0%
AGATGATATACTTAGGGAGA+TGG - chr3_1:66846250-66846269 Msa0369510:intron 35.0%
AGACTTGAATCCTCTTCAAC+CGG - chr3_1:66840703-66840722 Msa0369510:CDS 40.0%
!! CATTTGTTGGTTTCCCTTCT+AGG - chr3_1:66840968-66840987 Msa0369510:CDS 40.0%
GAATTAGGGGAAGCAACTAT+AGG + chr3_1:66841369-66841388 None:intergenic 40.0%
AATTCCAGGTCGTAAAAAGC+TGG + chr3_1:66841565-66841584 None:intergenic 40.0%
CGTACAATACACCAAATGGT+GGG + chr3_1:66841795-66841814 None:intergenic 40.0%
!! CCACCATTTGGTGTATTGTA+CGG - chr3_1:66841793-66841812 Msa0369510:CDS 40.0%
!! CACCATTTGGTGTATTGTAC+GGG - chr3_1:66841794-66841813 Msa0369510:CDS 40.0%
TTCCCGTACAATACACCAAA+TGG + chr3_1:66841799-66841818 None:intergenic 40.0%
!! ATTTGGTGTATTGTACGGGA+AGG - chr3_1:66841798-66841817 Msa0369510:CDS 40.0%
! TTTGGTGTATTGTACGGGAA+GGG - chr3_1:66841799-66841818 Msa0369510:CDS 40.0%
CGTACAATACACCAAATGGT+GGG + chr3_1:66841795-66841814 None:intergenic 40.0%
CTCTTGTGTAAAACAGGGTA+AGG + chr3_1:66841853-66841872 None:intergenic 40.0%
! CTTACCCTGTTTTACACAAG+AGG - chr3_1:66841851-66841870 Msa0369510:CDS 40.0%
ACAGCCTCTTGTGTAAAACA+GGG + chr3_1:66841858-66841877 None:intergenic 40.0%
AACAGCCTCTTGTGTAAAAC+AGG + chr3_1:66841859-66841878 None:intergenic 40.0%
GTTGTTGTCATGTGACTGAA+AGG + chr3_1:66841902-66841921 None:intergenic 40.0%
!! ATGTTGACTTACCAAACACC+TGG - chr3_1:66842156-66842175 Msa0369510:CDS 40.0%
GAACATTGATCGGATTTGTG+AGG + chr3_1:66842250-66842269 None:intergenic 40.0%
TCTGATGAATCCCACCTATA+AGG + chr3_1:66842445-66842464 None:intergenic 40.0%
TCAACTTCATGTGATGGCTT+TGG + chr3_1:66842745-66842764 None:intergenic 40.0%
AAGCCATCACATGAAGTTGA+AGG - chr3_1:66842745-66842764 Msa0369510:intron 40.0%
AAGCCTTCAACTTCATGTGA+TGG + chr3_1:66842751-66842770 None:intergenic 40.0%
! AGGTTGTGTTGTTGAGAAGT+TGG - chr3_1:66842813-66842832 Msa0369510:CDS 40.0%
GTTGTTGAGAAGTTGGAAGT+TGG - chr3_1:66842820-66842839 Msa0369510:CDS 40.0%
CTCTTCTTCAGATTCAGAAG+AGG - chr3_1:66842897-66842916 Msa0369510:CDS 40.0%
TCTTCAGATTCAGAAGAGGA+TGG - chr3_1:66842901-66842920 Msa0369510:CDS 40.0%
TGGTGGTAAGAGTGATCAAA+AGG - chr3_1:66842921-66842940 Msa0369510:intron 40.0%
!! TGATGGTGATGGCAAGTTTA+AGG - chr3_1:66842999-66843018 Msa0369510:intron 40.0%
GAAATGTATCCCTTCCCATT+TGG + chr3_1:66843256-66843275 None:intergenic 40.0%
AGCCTACTGTAAATGAGAAG+CGG - chr3_1:66843442-66843461 Msa0369510:CDS 40.0%
TTCCGCTTCTCATTTACAGT+AGG + chr3_1:66843447-66843466 None:intergenic 40.0%
TACTGTAAATGAGAAGCGGA+AGG - chr3_1:66843446-66843465 Msa0369510:CDS 40.0%
! TGATGATTTGGATGCCTTGT+GGG - chr3_1:66843536-66843555 Msa0369510:CDS 40.0%
TTATCTTCTTGATGGAACCG+CGG - chr3_1:66843587-66843606 Msa0369510:CDS 40.0%
AAAAATTGTCACACACACCG+CGG + chr3_1:66843607-66843626 None:intergenic 40.0%
AGTCTACAGAGTCTTTACAC+TGG - chr3_1:66843789-66843808 Msa0369510:CDS 40.0%
CTGATACCAAGAAAGAATCC+AGG - chr3_1:66843917-66843936 Msa0369510:CDS 40.0%
ACTATCCCTGGATTCTTTCT+TGG + chr3_1:66843926-66843945 None:intergenic 40.0%
ATCATGTTCACAACTATCCC+TGG + chr3_1:66843938-66843957 None:intergenic 40.0%
CTCAGAAATGTCTCGTATTG+CGG + chr3_1:66844016-66844035 None:intergenic 40.0%
TCTCCTCTTTGTACCTCTTT+GGG + chr3_1:66844396-66844415 None:intergenic 40.0%
TTCTCCTCTTTGTACCTCTT+TGG + chr3_1:66844397-66844416 None:intergenic 40.0%
CTCTATGGAACCATCACTTA+TGG - chr3_1:66844627-66844646 Msa0369510:intron 40.0%
GAAAAATCCAACTCAAGTGG+TGG - chr3_1:66844652-66844671 Msa0369510:intron 40.0%
TGTGTTATATCACATGCTCC+TGG - chr3_1:66844676-66844695 Msa0369510:intron 40.0%
AAAATGGAAGATTCCTGTGC+CGG - chr3_1:66844819-66844838 Msa0369510:intron 40.0%
TTGACATCACTAGAAGGTCT+TGG + chr3_1:66844922-66844941 None:intergenic 40.0%
! GAAGCACTAAATCAAGGTTG+AGG - chr3_1:66845130-66845149 Msa0369510:intron 40.0%
TCTAAATACCGAAGGAAAGG+CGG - chr3_1:66845291-66845310 Msa0369510:CDS 40.0%
! CAATTTTTCCGCCTTTCCTT+CGG + chr3_1:66845302-66845321 None:intergenic 40.0%
GAAAGAACGTCATTTGCTTG+AGG - chr3_1:66845326-66845345 Msa0369510:CDS 40.0%
TATTGATGAGGAGAAGATGC+AGG - chr3_1:66845401-66845420 Msa0369510:CDS 40.0%
ATTGATGAGGAGAAGATGCA+GGG - chr3_1:66845402-66845421 Msa0369510:intron 40.0%
TCAAAAGCTCAACCTCAAGA+GGG + chr3_1:66845599-66845618 None:intergenic 40.0%
ATCAAAAGCTCAACCTCAAG+AGG + chr3_1:66845600-66845619 None:intergenic 40.0%
CACTTGGATCAATACATCCA+TGG - chr3_1:66845622-66845641 Msa0369510:intron 40.0%
!!! TGCAACTAAGTTTTTTGCGG+AGG - chr3_1:66845668-66845687 Msa0369510:intron 40.0%
! TTTTCACCACTCGTGAGATT+AGG + chr3_1:66845764-66845783 None:intergenic 40.0%
TTAAGAATCTCACAGGTGCA+AGG + chr3_1:66845815-66845834 None:intergenic 40.0%
! GAGCTAGACTTGTTTGAAAG+AGG - chr3_1:66845897-66845916 Msa0369510:intron 40.0%
TCAATCAATGCTTGTGCTGA+AGG - chr3_1:66845975-66845994 Msa0369510:intron 40.0%
! TGATTTTTCTGGACTCTGAG+TGG - chr3_1:66846024-66846043 Msa0369510:intron 40.0%
GAAGAACTACTTGGAAAGAG+TGG - chr3_1:66846159-66846178 Msa0369510:intron 40.0%
! GATTTTCAGTGAGGAGTTTG+TGG - chr3_1:66846193-66846212 Msa0369510:intron 40.0%
! TTCTCTGCTTGCCATTTAGA+AGG + chr3_1:66846224-66846243 None:intergenic 40.0%
CAATCTATAGCCGGTTGAAG+AGG + chr3_1:66840716-66840735 None:intergenic 45.0%
! GTTGGTTTCCCTTCTAGGTT+TGG - chr3_1:66840973-66840992 Msa0369510:CDS 45.0%
GCACGCCACATTCAAAATCA+TGG + chr3_1:66841186-66841205 None:intergenic 45.0%
CCGTACAATACACCAAATGG+TGG + chr3_1:66841796-66841815 None:intergenic 45.0%
TTGGTGTATTGTACGGGAAG+GGG - chr3_1:66841800-66841819 Msa0369510:CDS 45.0%
GCGTACAATACACCAAATGG+TGG + chr3_1:66841828-66841847 None:intergenic 45.0%
GCTGCGTACAATACACCAAA+TGG + chr3_1:66841831-66841850 None:intergenic 45.0%
TCATGTGACTGAAAGGTCAC+GGG + chr3_1:66841895-66841914 None:intergenic 45.0%
GTCATGTGACTGAAAGGTCA+CGG + chr3_1:66841896-66841915 None:intergenic 45.0%
CAACTTTACTAGTTGCGCCA+AGG - chr3_1:66841918-66841937 Msa0369510:CDS 45.0%
! TCTGAACCCTCCGATTTGTA+AGG - chr3_1:66841975-66841994 Msa0369510:CDS 45.0%
CCAGTTCCTTACAAATCGGA+GGG + chr3_1:66841984-66842003 None:intergenic 45.0%
CTAGACTTAACTTCGCTCCT+GGG + chr3_1:66842027-66842046 None:intergenic 45.0%
ACTAGACTTAACTTCGCTCC+TGG + chr3_1:66842028-66842047 None:intergenic 45.0%
TCAAGGTTCACTTGGTACAG+AGG - chr3_1:66842300-66842319 Msa0369510:CDS 45.0%
!! ACTTCATGTGATGGCTTTGG+TGG + chr3_1:66842742-66842761 None:intergenic 45.0%
ACACAACCTACGTAACGTTC+AGG + chr3_1:66842802-66842821 None:intergenic 45.0%
TCAGATTCAGAAGAGGATGG+TGG - chr3_1:66842904-66842923 Msa0369510:CDS 45.0%
GAGGAAGAGACTTCATGTTG+TGG - chr3_1:66843212-66843231 Msa0369510:intron 45.0%
ACAGTAGGCTCTTCTTCAGT+TGG + chr3_1:66843432-66843451 None:intergenic 45.0%
! CACAAGGCATCCAAATCATC+AGG + chr3_1:66843537-66843556 None:intergenic 45.0%
! CTGATGATTTGGATGCCTTG+TGG - chr3_1:66843535-66843554 Msa0369510:CDS 45.0%
! ATGCCCAAAGAGGTACAAAG+AGG - chr3_1:66844390-66844409 Msa0369510:CDS 45.0%
!! GCATAACATTGCTGGCTCTA+TGG - chr3_1:66844612-66844631 Msa0369510:intron 45.0%
! AGAAAGGTTTTTCCTGCTCC+AGG + chr3_1:66844697-66844716 None:intergenic 45.0%
!!! GTTTTTGGAGCTAGGACTAG+AGG + chr3_1:66844769-66844788 None:intergenic 45.0%
!!! AGAGTGTGGTTTTTGGAGCT+AGG + chr3_1:66844777-66844796 None:intergenic 45.0%
! CACGTGTAGAGTGTGGTTTT+TGG + chr3_1:66844784-66844803 None:intergenic 45.0%
CAAAAACCACACTCTACACG+TGG - chr3_1:66844782-66844801 Msa0369510:intron 45.0%
TGGATAAGATAAACCGGCAC+AGG + chr3_1:66844835-66844854 None:intergenic 45.0%
!! GTGCCGGTTTATCTTATCCA+TGG - chr3_1:66844835-66844854 Msa0369510:intron 45.0%
CGGCCATGGATAAGATAAAC+CGG + chr3_1:66844841-66844860 None:intergenic 45.0%
CTAGAAGGTCTTGGAAATCC+AGG + chr3_1:66844913-66844932 None:intergenic 45.0%
GTCTTCGCAAGATACAGAAG+TGG - chr3_1:66844956-66844975 Msa0369510:intron 45.0%
ACACCCTAGTGTTCTTGTCA+TGG - chr3_1:66844984-66845003 Msa0369510:intron 45.0%
CACCCTAGTGTTCTTGTCAT+GGG - chr3_1:66844985-66845004 Msa0369510:intron 45.0%
AGCCCATGACAAGAACACTA+GGG + chr3_1:66844990-66845009 None:intergenic 45.0%
TAGCCCATGACAAGAACACT+AGG + chr3_1:66844991-66845010 None:intergenic 45.0%
AGGGCTTTCTCTCAATGCTT+TGG + chr3_1:66845076-66845095 None:intergenic 45.0%
!! AAAGCATTGAGAGAAAGCCC+TGG - chr3_1:66845075-66845094 Msa0369510:intron 45.0%
GTGCTGCGAAAAATCACTTC+CGG - chr3_1:66845432-66845451 Msa0369510:intron 45.0%
TTTGAGCCTAATCTCACGAG+TGG - chr3_1:66845755-66845774 Msa0369510:intron 45.0%
! TAAACCATTTTCTGCTGGCC+CGG + chr3_1:66846092-66846111 None:intergenic 45.0%
GTGTATCAGTTACTGACGAC+CGG - chr3_1:66846113-66846132 Msa0369510:intron 45.0%
TGTATCAGTTACTGACGACC+GGG - chr3_1:66846114-66846133 Msa0369510:intron 45.0%
CTTATCTTCTTCCATCGACC+CGG + chr3_1:66846135-66846154 None:intergenic 45.0%
ACTTAGGGAGATGGTTGAAG+AGG - chr3_1:66846259-66846278 Msa0369510:intron 45.0%
GAATGGATCATGGCAACCTG+TGG - chr3_1:66841419-66841438 Msa0369510:CDS 50.0%
! TGCTCCAGCTTTTTACGACC+TGG - chr3_1:66841558-66841577 Msa0369510:CDS 50.0%
AAGGTCACGGGTTCAAGTCT+TGG + chr3_1:66841883-66841902 None:intergenic 50.0%
AGAAAGGTCACGGGTAACCT+TGG + chr3_1:66841938-66841957 None:intergenic 50.0%
! CCCTCCGATTTGTAAGGAAC+TGG - chr3_1:66841981-66842000 Msa0369510:CDS 50.0%
GCCAGTTCCTTACAAATCGG+AGG + chr3_1:66841985-66842004 None:intergenic 50.0%
GGGGCCAGTTCCTTACAAAT+CGG + chr3_1:66841988-66842007 None:intergenic 50.0%
GATTTGTAAGGAACTGGCCC+CGG - chr3_1:66841987-66842006 Msa0369510:CDS 50.0%
TGGGTGAACTCTGGATTACC+GGG + chr3_1:66842008-66842027 None:intergenic 50.0%
CTGGGTGAACTCTGGATTAC+CGG + chr3_1:66842009-66842028 None:intergenic 50.0%
GTACAGCCTGAACGTTACGT+AGG - chr3_1:66842793-66842812 Msa0369510:CDS 50.0%
GCGGAAGGAAACAAGACTGT+TGG - chr3_1:66843461-66843480 Msa0369510:CDS 50.0%
ATAGCAGGGTTCAACTGCTG+AGG - chr3_1:66843888-66843907 Msa0369510:CDS 50.0%
GGAATCTACTGCCTTCGATG+TGG - chr3_1:66843979-66843998 Msa0369510:CDS 50.0%
GATAGGTGGAATGCCCAAAG+AGG - chr3_1:66844380-66844399 Msa0369510:CDS 50.0%
AACACAGCCACCACTTGAGT+TGG + chr3_1:66844662-66844681 None:intergenic 50.0%
ATATCACATGCTCCTGGAGC+AGG - chr3_1:66844682-66844701 Msa0369510:intron 50.0%
! TTTTCGCCACGTGTAGAGTG+TGG + chr3_1:66844791-66844810 None:intergenic 50.0%
TTGAACCTGGAGAGGTTCGA+CGG + chr3_1:66844861-66844880 None:intergenic 50.0%
GAGTACCAGTTACCCTCTTG+AGG - chr3_1:66845584-66845603 Msa0369510:intron 50.0%
CTCAACCTCAAGAGGGTAAC+TGG + chr3_1:66845592-66845611 None:intergenic 50.0%
!!! GCAGCTGTTTTGATCAGCCA+TGG + chr3_1:66845642-66845661 None:intergenic 50.0%
! TATTGCACGCGCTTTTCGAC+CGG - chr3_1:66846070-66846089 Msa0369510:intron 50.0%
ACTAGAGCTCCCGCATATGC+AGG - chr3_1:66841755-66841774 Msa0369510:CDS 55.0%
CTAGAGCTCCCGCATATGCA+GGG - chr3_1:66841756-66841775 Msa0369510:CDS 55.0%
GGGTGAACTCTGGATTACCG+GGG + chr3_1:66842007-66842026 None:intergenic 55.0%
CGGTAATCCAGAGTTCACCC+AGG - chr3_1:66842007-66842026 Msa0369510:CDS 55.0%
GCTTGCGACGTTCGAAACGT+AGG - chr3_1:66842767-66842786 Msa0369510:intron 55.0%
ATCCAACGCTGATGCCTGCA+AGG - chr3_1:66843368-66843387 Msa0369510:CDS 55.0%
TTCCTTGCAGGCATCAGCGT+TGG + chr3_1:66843373-66843392 None:intergenic 55.0%
AGGACTAGAGGTCGTTTCCC+TGG + chr3_1:66844757-66844776 None:intergenic 55.0%
CGTCGAACTTGAACCTGGAG+AGG + chr3_1:66844869-66844888 None:intergenic 55.0%
! GGTGTCGTCGAACTTGAACC+TGG + chr3_1:66844874-66844893 None:intergenic 55.0%
! ATTGCACGCGCTTTTCGACC+GGG - chr3_1:66846071-66846090 Msa0369510:intron 55.0%
! ATGCGGGAGCTCTAGTGCAC+CGG + chr3_1:66841751-66841770 None:intergenic 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr3_1:66841767-66841786 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr3_1:66841768-66841787 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr3_1:66841767-66841786 Msa0369510:CDS 60.0%
CATATGCAGGGTCCGGGAAG+GGG - chr3_1:66841768-66841787 Msa0369510:CDS 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr3_1:66841783-66841802 None:intergenic 60.0%
CTTCGCTCCTGGGTGAACTC+TGG + chr3_1:66842017-66842036 None:intergenic 60.0%
TCGACCGGGCCAGCAGAAAA+TGG - chr3_1:66846085-66846104 Msa0369510:intron 60.0%
GTTACTGACGACCGGGTCGA+TGG - chr3_1:66846121-66846140 Msa0369510:intron 60.0%
! TGCGGGAGCTCTAGTGCACC+GGG + chr3_1:66841750-66841769 None:intergenic 65.0%
GCTCCCGCATATGCAGGGTC+CGG - chr3_1:66841761-66841780 Msa0369510:CDS 65.0%
CTCCCGCATATGCAGGGTCC+GGG - chr3_1:66841762-66841781 Msa0369510:CDS 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr3_1:66841766-66841785 Msa0369510:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3_1:66841781-66841800 Msa0369510:CDS 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3_1:66841781-66841800 Msa0369510:CDS 65.0%
CTGGAGAGGTTCGACGGCCA+TGG + chr3_1:66844855-66844874 None:intergenic 65.0%
CATGGCCGTCGAACCTCTCC+AGG - chr3_1:66844853-66844872 Msa0369510:intron 65.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 66840486 66846337 66840486 ID=Msa0369510;Name=Msa0369510
chr3_1 mRNA 66840486 66846337 66840486 ID=Msa0369510-mRNA-1;Parent=Msa0369510;Name=Msa0369510-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|0.66|1|1|6|0|1297
chr3_1 exon 66846280 66846337 66846280 ID=Msa0369510-mRNA-1:exon:13636;Parent=Msa0369510-mRNA-1
chr3_1 exon 66845176 66845420 66845176 ID=Msa0369510-mRNA-1:exon:13635;Parent=Msa0369510-mRNA-1
chr3_1 exon 66844884 66844973 66844884 ID=Msa0369510-mRNA-1:exon:13634;Parent=Msa0369510-mRNA-1
chr3_1 exon 66843215 66844615 66843215 ID=Msa0369510-mRNA-1:exon:13633;Parent=Msa0369510-mRNA-1
chr3_1 exon 66842782 66842928 66842782 ID=Msa0369510-mRNA-1:exon:13632;Parent=Msa0369510-mRNA-1
chr3_1 exon 66840486 66842438 66840486 ID=Msa0369510-mRNA-1:exon:13631;Parent=Msa0369510-mRNA-1
chr3_1 CDS 66846280 66846337 66846280 ID=Msa0369510-mRNA-1:cds;Parent=Msa0369510-mRNA-1
chr3_1 CDS 66845176 66845420 66845176 ID=Msa0369510-mRNA-1:cds;Parent=Msa0369510-mRNA-1
chr3_1 CDS 66844884 66844973 66844884 ID=Msa0369510-mRNA-1:cds;Parent=Msa0369510-mRNA-1
chr3_1 CDS 66843215 66844615 66843215 ID=Msa0369510-mRNA-1:cds;Parent=Msa0369510-mRNA-1
chr3_1 CDS 66842782 66842928 66842782 ID=Msa0369510-mRNA-1:cds;Parent=Msa0369510-mRNA-1
chr3_1 CDS 66840486 66842438 66840486 ID=Msa0369510-mRNA-1:cds;Parent=Msa0369510-mRNA-1
Gene Sequence

>Msa0369510

ATGGCGCCCATAAAAAGGCATTTGCATCAATGGAAGCATCCATTTGATGCTAATTATCCATTTGAAGCAGTATTGAATGGATCATGGCAACCTGTGGAACTCTTAAAAATAGAGTCAGGAAAAACTACCTTACGTTTCATTGATACTGAACAAATTCAAAGCACTTTGTCATCAGATATTCGGATAAGATCAAGGAAAGCTACTTCATCTGATTGCTCCAGCTTTTTACGACCTGGAATTGATATATCTATGCTATTAGGCTATCGATACAATGATAATTCAGATCCATTTACGTCTATTCCACCTTACCCTGTTTTACACAAGAGGCTGTTTCCAAGACTTGAACCCGTGACCTTTCAGTCACATGACAACAACTTTACTAGTTGCGCCAAGATGTGGATTGATGCAAGAATAAATTCTATACATAGACAGCCTCACAAATCCGATCAATGTTCATGTCAATTTTATGTTAACTTATATGATGATCAAGGTTCACTTGGTACAGAGGTAAAAACTCTTAATAAAGAGGTTAATGCAATTGAAATAGATCAAATTTTCATCCTCCAAAGGCTTCAACATAATACTTGTGAAGGCTTGTTAAAAGAAAATGATACCTCTGAAATTAAGCCTTATAGGTGGGATTCATCAGAAGATTGCTCTTCATTATCACAATCTAGATTACTCGTTGGGAAATTTTCATCTGATCTTTCGTGGTTTGTAATTACATCTTTTTTAAAGAAGGTTTCATTCCATATAAGATCTGTGCAAAACAAGATTGTGTATCAAGTTATGGGAAATGAAACTGACATTATTAGTCCTTGGCTTATAAATGTTGTGAACTTCAGCTTAAAAAAGGAATCACTAGTACCTATTGTTTCTCAATTTGATGTATTTTATGATTATGATGGAGAAGAAGATGAAGCGCCACCAAAGCCATCACATGAAGTTGAAGGCTTGCGACGTTCGAAACGTAGGAATGTACAGCCTGAACGTTACGTAGGTTGTGTTGTTGAGAAGTTGGAAGTTGGTAATTTTCGAACGTGTCCCTACAAGAGAACAACTTATATGATAGAAGATGAAAACTCTTCTTCAGATTCAGAAGAGGATGGTGGTAAGAGTGATCAAAAGGTTAATAAGGTGAATCATTGCAAAGCTATTAATGTGAGCACAAGGAACAAAAATTATGATGGTGATGGCAAGTTTAAGGTACATAAAACTGATGACATTTCTTCCAAATATCATTATTTGACTAATTATATTTCTTGTGCAAAGAAGAATGGTGTTGATGTATTGAATTTGGAGTACGGCAATGAGCCTACAACAATATCAAGTGATGAAGAAGTTGATGGTAATGTTACTTTGAGAAATTATAATAGTTTCTTTAAAGAGAAGATAAAGAGGAAGAGACTTCATGTTGTGGATGATATGGATTTTCAAACCAAATGGGAAGGGATACATTTCAAAAAAGAAGCTCCAACAGAAAATTTTCATTCGAGTTATTTGTCTAACAGAGGTCATGTTCATGAAGAACAAGATCATAAAGGCGGTAGAACATCCAACGCTGATGCCTGCAAGGAAATAATAGATAGTTACATGAAGAATTTTGATAGTCTACCAACTGAAGAAGAGCCTACTGTAAATGAGAAGCGGAAGGAAACAAGACTGTTGGAGAAAAAGGAAGAAGAAAAAGTATCGAAAAGCAATGATGAGGAAGAATATCCTGATGATTTGGATGCCTTGTGGGAAGAAATGAATACAGCTTTGACATCAAGTTATCTTCTTGATGGAACCGCGGGTTCAACTGCTGAGGTTGTAGCTGATACCAAGAAAGAATCCAGGGATAGTTGTGAACATGATTTTAGATTGGATGAAGAAATTGGAATCTACTGCCTTCGATGTGGATTTGTGAAAACCGCAATACGAGACATTTCTGAGCCATTTGTGGAATGCCCAAAGAGGTACAAAGAGGAGAAACAGTGCAGTGAAGAAAATAAGGAACATAAATCAGAGCCAAAAGTTGATGAAGATTATAATAATGATATGTTCTCGACTCATGCTACTGATCCTGATGAACCATTGACTAATGATATCGACAATGTTTGGGAATTGATTCCTGAACTTGAAGAAAAGATGCATGAACACCAGAAAAAAGCTTTTGAATTTCTTTGGCATAACATTGCTGGCTCTATGGAACCATCACTTATGGAAGAAAAATCCAACTCAAGTGGTGGCTGTGTTATATCACATGCTCCTGGAGCAGGAAAAACCTTTCTCATCATTTCTTTTCTTGTAAGTTACTTGAAGTTATTTCCAGGGAAACGACCTCTAGTCCTAGCTCCAAAAACCACACTCTACACGTGGCGAAAAGAGTTCAAAAAATGGAAGATTCCTGTGCCGGTTTATCTTATCCATGGCCGTCGAACCTCTCCAGGTTCAAGTTCGACGACACCAAAATCAATGATTCTTCCTGGATTTCCAAGACCTTCTAGTGATGTCAAACATGTTTTGGATTGTCTTCGCAAGATACAGAAGTGGCACTCACACCCTAGTGTTCTTGTCATGGGCTATACTTCATTTTTACAATTAATGAGATCAAAAGATACAAAATTCGAACACAGAAAATACATGGCCAAAGCATTGAGAGAAAGCCCTGGAATCTTGATACTTGATGAAGGACACAATCCTAGAAGCACTAAATCAAGGTTGAGGAAATGTTTAATGAAACTTCCAACAGAATTGAGAATATTACTCTCCGGCACATTGTTTCAGAACAATTTCGGTGAATATTTCAACACACTTTGTTTAGCTAGACCGAAATTTGTTCATGAAGTTCTACAAGAGTTAGATTCTAAATACCGAAGGAAAGGCGGAAAAATTGCGAAGAAAGAACGTCATTTGCTTGAGGCGCGCGCAAGAAAATTCTTCTTGAACAACATTGAAAAGAAAATTAACTCAGATATTGATGAGGAGAAGATGCAGGGTCTATATGTGCTGCGAAAAATCACTTCCGGTTTTATTGATGTGTACGACAGTGGAAATTCTTCTGAGACTCTTCCTGGTTTACAAATCTATACATTGCTCATGAATACGTCCGATGAACAGCATGAGATTGTACAGAAACTACAGAGGAAAATGGCTGAGAGTACCAGTTACCCTCTTGAGGTTGAGCTTTTGATAACACTTGGATCAATACATCCATGGCTGATCAAAACAGCTGCATCATGTGCAACTAAGTTTTTTGCGGAGGAAGAATTGAAGAAACTAGAAACAAGCAAATTTGATTTGAGAAAAGGTTCCAAAGTAAGATTTGTTTTGAGCCTAATCTCACGAGTGGTGAAAAATGAAAAGGTTCTTATCTTTTGTCACAACCTTGCACCTGTGAGATTCTTAATAGAGTTTTTTGAGAAATATTTTCAGTGGCAAAATGGTAAAGAGATTATGGTACTAACGGGTGAGCTAGACTTGTTTGAAAGAGGGAAAGTGATAGATAAATTTGAAGATCAAAGCAGCGGTTCAAAGATACTTCTTGCTTCAATCAATGCTTGTGCTGAAGGTATAAGTTTAACAGCAGCTTCTAGAGTGATTTTTCTGGACTCTGAGTGGAATCCTTCAAAAACAAAGCAAGCTATTGCACGCGCTTTTCGACCGGGCCAGCAGAAAATGGTTTATGTGTATCAGTTACTGACGACCGGGTCGATGGAAGAAGATAAGTATAGAAGAACTACTTGGAAAGAGTGGGTTTCTTGCATGATTTTCAGTGAGGAGTTTGTGGAAGATCCTTCTAAATGGCAAGCAGAGAAGATTGAAGATGATATACTTAGGGAGATGGTTGAAGAGGATAAGTCTAAAGCTATTCACATGATTATGAAGAATGAAAAGGCTTCAACAATCTAA
Protein sequence

>Msa0369510

MAPIKRHLHQWKHPFDANYPFEAVLNGSWQPVELLKIESGKTTLRFIDTEQIQSTLSSDIRIRSRKATSSDCSSFLRPGIDISMLLGYRYNDNSDPFTSIPPYPVLHKRLFPRLEPVTFQSHDNNFTSCAKMWIDARINSIHRQPHKSDQCSCQFYVNLYDDQGSLGTEVKTLNKEVNAIEIDQIFILQRLQHNTCEGLLKENDTSEIKPYRWDSSEDCSSLSQSRLLVGKFSSDLSWFVITSFLKKVSFHIRSVQNKIVYQVMGNETDIISPWLINVVNFSLKKESLVPIVSQFDVFYDYDGEEDEAPPKPSHEVEGLRRSKRRNVQPERYVGCVVEKLEVGNFRTCPYKRTTYMIEDENSSSDSEEDGGKSDQKVNKVNHCKAINVSTRNKNYDGDGKFKVHKTDDISSKYHYLTNYISCAKKNGVDVLNLEYGNEPTTISSDEEVDGNVTLRNYNSFFKEKIKRKRLHVVDDMDFQTKWEGIHFKKEAPTENFHSSYLSNRGHVHEEQDHKGGRTSNADACKEIIDSYMKNFDSLPTEEEPTVNEKRKETRLLEKKEEEKVSKSNDEEEYPDDLDALWEEMNTALTSSYLLDGTAGSTAEVVADTKKESRDSCEHDFRLDEEIGIYCLRCGFVKTAIRDISEPFVECPKRYKEEKQCSEENKEHKSEPKVDEDYNNDMFSTHATDPDEPLTNDIDNVWELIPELEEKMHEHQKKAFEFLWHNIAGSMEPSLMEEKSNSSGGCVISHAPGAGKTFLIISFLVSYLKLFPGKRPLVLAPKTTLYTWRKEFKKWKIPVPVYLIHGRRTSPGSSSTTPKSMILPGFPRPSSDVKHVLDCLRKIQKWHSHPSVLVMGYTSFLQLMRSKDTKFEHRKYMAKALRESPGILILDEGHNPRSTKSRLRKCLMKLPTELRILLSGTLFQNNFGEYFNTLCLARPKFVHEVLQELDSKYRRKGGKIAKKERHLLEARARKFFLNNIEKKINSDIDEEKMQGLYVLRKITSGFIDVYDSGNSSETLPGLQIYTLLMNTSDEQHEIVQKLQRKMAESTSYPLEVELLITLGSIHPWLIKTAASCATKFFAEEELKKLETSKFDLRKGSKVRFVLSLISRVVKNEKVLIFCHNLAPVRFLIEFFEKYFQWQNGKEIMVLTGELDLFERGKVIDKFEDQSSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQLLTTGSMEEDKYRRTTWKEWVSCMIFSEEFVEDPSKWQAEKIEDDILREMVEEDKSKAIHMIMKNEKASTI*