Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386450 | XP_003603883.2 | 90.886 | 395 | 10 | 4 | 1 | 392 | 1 | 372 | 0.0 | 722 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386450 | sp|Q0WNR6|ARID5_ARATH | 70.279 | 323 | 75 | 6 | 68 | 389 | 132 | 434 | 7.68e-149 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386450 | G7J6H5 | 90.886 | 395 | 10 | 4 | 1 | 392 | 1 | 372 | 0.0 | 722 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0386450 | TR | ARID |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386450 | MtrunA17_Chr3g0144341 | 90.886 | 395 | 10 | 4 | 1 | 392 | 1 | 372 | 0.0 | 722 |
| Msa0386450 | MtrunA17_Chr5g0407561 | 57.923 | 366 | 105 | 7 | 52 | 390 | 260 | 603 | 8.46e-136 | 401 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0386450 | AT1G76510.2 | 70.279 | 323 | 75 | 6 | 68 | 389 | 132 | 434 | 7.81e-150 | 431 |
| Msa0386450 | AT1G76510.4 | 70.279 | 323 | 75 | 6 | 68 | 389 | 132 | 434 | 7.81e-150 | 431 |
| Msa0386450 | AT1G76510.1 | 70.279 | 323 | 75 | 6 | 68 | 389 | 132 | 434 | 7.81e-150 | 431 |
| Msa0386450 | AT1G76510.3 | 65.982 | 341 | 72 | 7 | 73 | 389 | 137 | 457 | 1.25e-142 | 415 |
| Msa0386450 | AT1G20910.1 | 64.596 | 322 | 95 | 4 | 68 | 389 | 96 | 398 | 4.41e-136 | 395 |
| Msa0386450 | AT2G17410.1 | 61.006 | 318 | 101 | 4 | 73 | 389 | 489 | 784 | 1.01e-121 | 370 |
| Msa0386450 | AT2G17410.3 | 61.006 | 318 | 101 | 4 | 73 | 389 | 489 | 784 | 1.01e-121 | 370 |
| Msa0386450 | AT2G17410.2 | 61.006 | 318 | 95 | 4 | 73 | 389 | 489 | 778 | 1.38e-120 | 367 |
| Msa0386450 | AT1G20910.2 | 63.356 | 292 | 88 | 4 | 68 | 359 | 96 | 368 | 4.76e-116 | 343 |
Find 123 sgRNAs with CRISPR-Local
Find 432 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAAACGAAGAATGGATAAT+TGG | 0.174999 | 3_1:+90180132 | None:intergenic |
| TTCTTTCTCTTTCTCTTTCT+CGG | 0.226025 | 3_1:+90180238 | None:intergenic |
| GAAGTATATGCTCTAGTTCC+TGG | 0.233784 | 3_1:-90175545 | Msa0386450:CDS |
| TTGGCATGCTCAGCGCCTTA+TGG | 0.294765 | 3_1:-90176900 | Msa0386450:CDS |
| TTGGGTGAGTCACGTTTGTT+TGG | 0.305645 | 3_1:+90180151 | None:intergenic |
| GAAAAGCATAAGAGAGAGAT+TGG | 0.315271 | 3_1:-90177932 | Msa0386450:CDS |
| TTTGTAGACCGCTGTTTATC+AGG | 0.316112 | 3_1:-90176975 | Msa0386450:intron |
| CAATGGGACTTGATAAAACT+TGG | 0.325300 | 3_1:+90179451 | None:intergenic |
| GTTGGACGACTTGTTATAAC+TGG | 0.347669 | 3_1:-90175001 | Msa0386450:CDS |
| TCTGTAACGTTCTTAACTTT+AGG | 0.348861 | 3_1:+90179688 | None:intergenic |
| ACGTTCTTAACTTTAGGTTT+TGG | 0.366210 | 3_1:+90179694 | None:intergenic |
| GCATATTGCACCAGTGCATT+TGG | 0.369109 | 3_1:+90174448 | None:intergenic |
| TCTTTCTCTTTCTCTTTCTC+GGG | 0.386105 | 3_1:+90180239 | None:intergenic |
| TGGCATGCTCAGCGCCTTAT+GGG | 0.389962 | 3_1:-90176899 | Msa0386450:CDS |
| TTTCCTCCCCGGAAAATGAT+TGG | 0.394311 | 3_1:-90174613 | Msa0386450:three_prime_UTR |
| TTTCCACACTCGATGGTTGA+TGG | 0.396113 | 3_1:+90177882 | None:intergenic |
| ATAAAATAGTAAAATTGAAA+TGG | 0.399656 | 3_1:-90180276 | None:intergenic |
| AGGTAGGGCGCGGAGGGATG+CGG | 0.401043 | 3_1:-90176942 | Msa0386450:CDS |
| ATCAATGGAGGGTCATGAAA+TGG | 0.404745 | 3_1:-90179848 | Msa0386450:exon |
| AACTAACAACAGCAGATGTT+TGG | 0.411334 | 3_1:+90174688 | None:intergenic |
| GGTTCCTGAGTCAGCTGTTA+AGG | 0.416729 | 3_1:-90176867 | Msa0386450:intron |
| ATGCTCGAGCTCTTTCATAA+AGG | 0.418085 | 3_1:+90179508 | None:intergenic |
| AAAACGAAGAATGGATAATT+GGG | 0.420847 | 3_1:+90180133 | None:intergenic |
| CTCCGCGCCCTACCTGAGCC+TGG | 0.423147 | 3_1:+90176950 | None:intergenic |
| CAGAAAATGCTGACAATCCA+TGG | 0.427370 | 3_1:-90174973 | Msa0386450:CDS |
| GTTTATCAGGCTCCAGGCTC+AGG | 0.427487 | 3_1:-90176962 | Msa0386450:CDS |
| AAAAGCATAAGAGAGAGATT+GGG | 0.443286 | 3_1:-90177931 | Msa0386450:CDS |
| TTGATCTTCACCCAATCAGC+TGG | 0.444221 | 3_1:+90175712 | None:intergenic |
| GACAGAGCTGCAAACATAGA+AGG | 0.444672 | 3_1:-90176570 | Msa0386450:CDS |
| TGGGTGAGTCACGTTTGTTT+GGG | 0.451432 | 3_1:+90180152 | None:intergenic |
| GTTATAACAAGTCGTCCAAC+TGG | 0.451498 | 3_1:+90175004 | None:intergenic |
| TGATGAAGCCGGTACGCCTA+TGG | 0.462210 | 3_1:-90179540 | Msa0386450:CDS |
| AGGCTCAGGTAGGGCGCGGA+GGG | 0.464479 | 3_1:-90176948 | Msa0386450:CDS |
| CTGCACGTGCAATGCAAGGT+TGG | 0.470880 | 3_1:-90176919 | Msa0386450:CDS |
| GTTTCTCGCATATTCTCAAA+AGG | 0.473365 | 3_1:-90174591 | Msa0386450:three_prime_UTR |
| GATTCAATGAAAACGAAGAA+TGG | 0.474859 | 3_1:+90180124 | None:intergenic |
| TTTCTACAGATCGAGGTCCT+TGG | 0.482284 | 3_1:-90179486 | Msa0386450:CDS |
| AAGTATATGCTCTAGTTCCT+GGG | 0.483026 | 3_1:-90175544 | Msa0386450:CDS |
| TGTACGCGTTCCTTTCGAGC+AGG | 0.485574 | 3_1:-90174649 | Msa0386450:CDS |
| CTCCAGGCTCAGGTAGGGCG+CGG | 0.493114 | 3_1:-90176952 | Msa0386450:CDS |
| ACATACTTGAGGCAATTCAA+TGG | 0.496631 | 3_1:+90179434 | None:intergenic |
| GAACCTCGCCGTATCCCATA+AGG | 0.497226 | 3_1:+90176885 | None:intergenic |
| ATAAAGGCTTCTCGCTCCAT+AGG | 0.502198 | 3_1:+90179524 | None:intergenic |
| CAGGCTCAGGTAGGGCGCGG+AGG | 0.503793 | 3_1:-90176949 | Msa0386450:CDS |
| GAAGATCAATGTGCGGGAAA+CGG | 0.506451 | 3_1:-90175698 | Msa0386450:intron |
| TTGTTCAAGTTGAGGAGTGA+GGG | 0.508455 | 3_1:+90179729 | None:intergenic |
| ACAGAGAACACCGTCTGGTA+TGG | 0.509878 | 3_1:-90176595 | Msa0386450:CDS |
| ACCGCTGTTTATCAGGCTCC+AGG | 0.511245 | 3_1:-90176968 | Msa0386450:CDS |
| AAAGCATAAGAGAGAGATTG+GGG | 0.512312 | 3_1:-90177930 | Msa0386450:CDS |
| AAGAGTGAGCCGTGGAGAGG+TGG | 0.512363 | 3_1:-90180217 | Msa0386450:five_prime_UTR |
| GAAGTCAATAATAACAATGC+TGG | 0.518567 | 3_1:-90179667 | Msa0386450:CDS |
| GGTTGATGGAGTGATCCGAC+AGG | 0.527898 | 3_1:+90177896 | None:intergenic |
| TCTGCTGTTGTTAGTTTGCA+TGG | 0.528508 | 3_1:-90174681 | Msa0386450:CDS |
| CATACTTGAGGCAATTCAAT+GGG | 0.529182 | 3_1:+90179435 | None:intergenic |
| TGATCTTCACCCAATCAGCT+GGG | 0.529764 | 3_1:+90175713 | None:intergenic |
| AGGAACTAGTCTAGCCCTGT+TGG | 0.531582 | 3_1:-90174530 | Msa0386450:three_prime_UTR |
| ACCTCTTCACGAAGGAGCCC+AGG | 0.532624 | 3_1:+90175527 | None:intergenic |
| CTGCAAACATAGAAGGAGAC+AGG | 0.533192 | 3_1:-90176563 | Msa0386450:CDS |
| TGTTGTTGTTGTTCAAGTTG+AGG | 0.536049 | 3_1:+90179721 | None:intergenic |
| CTTACTCAGACAGAAATCAA+TGG | 0.545998 | 3_1:-90179863 | Msa0386450:intron |
| TTCTCGCTCCATAGGCGTAC+CGG | 0.546405 | 3_1:+90179532 | None:intergenic |
| CACACAGCTCCCTGCTCGAA+AGG | 0.552889 | 3_1:+90174639 | None:intergenic |
| TCGAAGTTGTGGCGGTCAGT+AGG | 0.553786 | 3_1:-90178590 | Msa0386450:CDS |
| GTCGTCCAACTGGATCGGAT+TGG | 0.556323 | 3_1:+90175014 | None:intergenic |
| GCGGCTGCACGTGCAATGCA+AGG | 0.557817 | 3_1:-90176923 | Msa0386450:CDS |
| ATCAATGATTTATTCTCTCT+AGG | 0.558415 | 3_1:-90174478 | Msa0386450:three_prime_UTR |
| GCTCAGCGCCTTATGGGATA+CGG | 0.558831 | 3_1:-90176893 | Msa0386450:CDS |
| GGACTTGCACTACAGTCTCA+TGG | 0.558888 | 3_1:-90178316 | Msa0386450:CDS |
| AACAAACAGAGAACACCGTC+TGG | 0.560624 | 3_1:-90176600 | Msa0386450:CDS |
| AACAAGTCGTCCAACTGGAT+CGG | 0.560628 | 3_1:+90175009 | None:intergenic |
| ATATCAAAGGATAAAGATAA+CGG | 0.561585 | 3_1:+90175491 | None:intergenic |
| TCCTGGGCTCCTTCGTGAAG+AGG | 0.564218 | 3_1:-90175528 | Msa0386450:CDS |
| AGGTAAAATACCAAATGCAC+TGG | 0.569638 | 3_1:-90174458 | Msa0386450:three_prime_UTR |
| GTACGCGTTCCTTTCGAGCA+GGG | 0.571183 | 3_1:-90174648 | Msa0386450:CDS |
| AATGGGACTTGATAAAACTT+GGG | 0.574691 | 3_1:+90179452 | None:intergenic |
| AATTATAGACAGTGAAAGCA+TGG | 0.578369 | 3_1:-90174560 | Msa0386450:three_prime_UTR |
| GTTGTTCAAGTTGAGGAGTG+AGG | 0.579571 | 3_1:+90179728 | None:intergenic |
| ATGCACTGGTGCAATATGCT+TGG | 0.579723 | 3_1:-90174444 | Msa0386450:three_prime_UTR |
| AGAAAATGCTGACAATCCAT+GGG | 0.582520 | 3_1:-90174972 | Msa0386450:CDS |
| AGTGAAAGCATGGTTATGCT+AGG | 0.584463 | 3_1:-90174550 | Msa0386450:three_prime_UTR |
| AGGTAACTGCATCGAAGTTG+TGG | 0.585142 | 3_1:-90178601 | Msa0386450:CDS |
| TAGGTTGGTCACAGCAGTAG+TGG | 0.586143 | 3_1:-90175746 | Msa0386450:CDS |
| TGGAGAGCTGTTATCAGACT+AGG | 0.587815 | 3_1:-90179083 | Msa0386450:CDS |
| TGGAGTGGATCAATTCTCGC+AGG | 0.587913 | 3_1:+90174708 | None:intergenic |
| TCAGGCTCCAGGCTCAGGTA+GGG | 0.588503 | 3_1:-90176957 | Msa0386450:CDS |
| ATATCTAGTCCTTACTTGGG+AGG | 0.589671 | 3_1:+90178554 | None:intergenic |
| CTTGGGAGGCTTGAATTCCA+AGG | 0.591311 | 3_1:+90179469 | None:intergenic |
| AAGAAGAGTGAGCCGTGGAG+AGG | 0.592568 | 3_1:-90180220 | Msa0386450:five_prime_UTR |
| CTAGTCCTTACTTGGGAGGG+TGG | 0.595303 | 3_1:+90178558 | None:intergenic |
| CAATAATAACAATGCTGGCG+AGG | 0.597301 | 3_1:-90179662 | Msa0386450:intron |
| ATCAGGCTCCAGGCTCAGGT+AGG | 0.598841 | 3_1:-90176958 | Msa0386450:CDS |
| ATGGCTGCTTATGATGAAGC+CGG | 0.600910 | 3_1:-90179551 | Msa0386450:CDS |
| TGAGTGCTGATATTCACAAA+CGG | 0.601399 | 3_1:-90180188 | Msa0386450:five_prime_UTR |
| AGAGAAAGAAGAGTGAGCCG+TGG | 0.606262 | 3_1:-90180225 | Msa0386450:five_prime_UTR |
| TATCTAGTCCTTACTTGGGA+GGG | 0.608180 | 3_1:+90178555 | None:intergenic |
| ACTCCATCAACCATCGAGTG+TGG | 0.608784 | 3_1:-90177885 | Msa0386450:CDS |
| GTCACAGCAGTAGTGGACAT+TGG | 0.609262 | 3_1:-90175739 | Msa0386450:CDS |
| ATTCTCTCGCATTCTCAACA+AGG | 0.614488 | 3_1:-90179992 | Msa0386450:intron |
| CAGACCTTAACAGCTGACTC+AGG | 0.614584 | 3_1:+90176863 | None:intergenic |
| GGGACTTGATAAAACTTGGG+AGG | 0.626061 | 3_1:+90179455 | None:intergenic |
| GATCTTCACCCAATCAGCTG+GGG | 0.626273 | 3_1:+90175714 | None:intergenic |
| AATTGAAATGGAAGAAACGA+AGG | 0.627334 | 3_1:-90180264 | Msa0386450:five_prime_UTR |
| CTCAGACAGAAATCAATGGA+GGG | 0.633845 | 3_1:-90179859 | Msa0386450:intron |
| TCAGCAGCTCCACCTCTCCA+CGG | 0.636350 | 3_1:+90180208 | None:intergenic |
| CAGACTAGGTGGCTATGAAG+TGG | 0.636788 | 3_1:-90179069 | Msa0386450:intron |
| CGGGTCCAATCCGATCCAGT+TGG | 0.638558 | 3_1:-90175019 | Msa0386450:CDS |
| ACTCAGACAGAAATCAATGG+AGG | 0.640060 | 3_1:-90179860 | Msa0386450:intron |
| TTGGGTGAAGATCAATGTGC+GGG | 0.643862 | 3_1:-90175704 | Msa0386450:CDS |
| GGGGAGTTACAGCTCCCTGT+CGG | 0.649300 | 3_1:-90177911 | Msa0386450:CDS |
| ATCTTCACCCAATCAGCTGG+GGG | 0.651763 | 3_1:+90175715 | None:intergenic |
| TCGAGCATTTCTACAGATCG+AGG | 0.659811 | 3_1:-90179493 | Msa0386450:CDS |
| ACAACAGCAGATGTTTGGAG+TGG | 0.672692 | 3_1:+90174693 | None:intergenic |
| TAAAGATAACGGAACTACAG+AGG | 0.675556 | 3_1:+90175502 | None:intergenic |
| GCGCCTTATGGGATACGGCG+AGG | 0.677937 | 3_1:-90176888 | Msa0386450:CDS |
| GTTGATGGAGTGATCCGACA+GGG | 0.680833 | 3_1:+90177897 | None:intergenic |
| TAACTGCATCGAAGTTGTGG+CGG | 0.684336 | 3_1:-90178598 | Msa0386450:CDS |
| GCTCTGTCATCCATACCAGA+CGG | 0.693775 | 3_1:+90176585 | None:intergenic |
| GAGAATTAATTAGAGTAACG+CGG | 0.696958 | 3_1:+90180052 | None:intergenic |
| GCCTGGAGCCTGATAAACAG+CGG | 0.707020 | 3_1:+90176967 | None:intergenic |
| ATTGGGTGAAGATCAATGTG+CGG | 0.707083 | 3_1:-90175705 | Msa0386450:CDS |
| AGAGCTGTTATCAGACTAGG+TGG | 0.717567 | 3_1:-90179080 | Msa0386450:CDS |
| CAGAGGTTACCTCTTCACGA+AGG | 0.753208 | 3_1:+90175519 | None:intergenic |
| GAAAATGCTGACAATCCATG+GGG | 0.772709 | 3_1:-90174971 | Msa0386450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTATTATTAAAATGAAAA+TGG | + | chr3_1:90175952-90175971 | None:intergenic | 10.0% |
| !!! | TAATTCTTTATTTTATTTTG+CGG | + | chr3_1:90178306-90178325 | None:intergenic | 10.0% |
| !! | TTAAAATGTATTCAAAAGAA+TGG | + | chr3_1:90175035-90175054 | None:intergenic | 15.0% |
| !!! | TTTTATATAATACATACTTG+AGG | + | chr3_1:90175205-90175224 | None:intergenic | 15.0% |
| !!! | CATTTGTTATTAAATATTAG+AGG | - | chr3_1:90177233-90177252 | Msa0386450:intron | 15.0% |
| !! | GTAAAACTTACTTAATATTA+AGG | - | chr3_1:90179167-90179186 | Msa0386450:intron | 15.0% |
| !! | TGAAAATAGTAAATATATCA+AGG | + | chr3_1:90179725-90179744 | None:intergenic | 15.0% |
| !!! | ATATATTTACTATTTTCATC+TGG | - | chr3_1:90179727-90179746 | Msa0386450:CDS | 15.0% |
| !! | AACAATATTAAATATTAGCT+TGG | - | chr3_1:90179832-90179851 | Msa0386450:CDS | 15.0% |
| !! | CTATAAAATGCAAAAAACTA+CGG | + | chr3_1:90175636-90175655 | None:intergenic | 20.0% |
| !!! | TCATTATATTCTAGTTTGTT+TGG | - | chr3_1:90175856-90175875 | Msa0386450:intron | 20.0% |
| !!! | ATTTAGTTCTCTTATGTTTT+TGG | - | chr3_1:90175926-90175945 | Msa0386450:intron | 20.0% |
| !!! | TCAGTTATTTATTTTTGAAC+AGG | + | chr3_1:90175983-90176002 | None:intergenic | 20.0% |
| !!! | ATAACAAGTTTTTCATTTCT+AGG | + | chr3_1:90177319-90177338 | None:intergenic | 20.0% |
| !! | GAAAAGAACCTAAAAAATAT+CGG | - | chr3_1:90177918-90177937 | Msa0386450:CDS | 20.0% |
| !!! | TATTGATTCACAAAATAGTA+GGG | + | chr3_1:90178436-90178455 | None:intergenic | 20.0% |
| !! | AGGAATTATTAATGGTTAAA+TGG | + | chr3_1:90178542-90178561 | None:intergenic | 20.0% |
| !!! | TTTCAAGTAGGAATTATTAA+TGG | + | chr3_1:90178550-90178569 | None:intergenic | 20.0% |
| !!! | AATTATTTCAGATTTCAAGT+AGG | + | chr3_1:90178562-90178581 | None:intergenic | 20.0% |
| !! | ATATCAAAGGATAAAGATAA+CGG | + | chr3_1:90179137-90179156 | None:intergenic | 20.0% |
| !!! | ATTTTTGATTCAATAGAACT+AGG | + | chr3_1:90179195-90179214 | None:intergenic | 20.0% |
| !! | CTATTGAATCAAAAATATGT+CGG | - | chr3_1:90179199-90179218 | Msa0386450:intron | 20.0% |
| !!! | ATCCAAAAAAAATCTTTTCA+GGG | - | chr3_1:90179387-90179406 | Msa0386450:intron | 20.0% |
| ! | AAAACGAAGAATGGATAATT+GGG | + | chr3_1:90174495-90174514 | None:intergenic | 25.0% |
| ! | TTGTTATCTTATTATGCAGA+TGG | - | chr3_1:90175055-90175074 | Msa0386450:intron | 25.0% |
| ! | ACTGTAACAAACAATTTGAA+GGG | + | chr3_1:90175229-90175248 | None:intergenic | 25.0% |
| ! | TACTGTAACAAACAATTTGA+AGG | + | chr3_1:90175230-90175249 | None:intergenic | 25.0% |
| ! | GCTAAATGCTGAATATATAA+GGG | - | chr3_1:90175328-90175347 | Msa0386450:intron | 25.0% |
| !! | TCATTTAGTGCTATATGTTT+TGG | - | chr3_1:90175896-90175915 | Msa0386450:intron | 25.0% |
| !! | CATTTAGTGCTATATGTTTT+GGG | - | chr3_1:90175897-90175916 | Msa0386450:intron | 25.0% |
| ! | AATATTCACCGAATATATGT+AGG | - | chr3_1:90176004-90176023 | Msa0386450:intron | 25.0% |
| ! | AATATATCTAGTCCTTACTT+GGG | + | chr3_1:90176077-90176096 | None:intergenic | 25.0% |
| ! | TAATATATCTAGTCCTTACT+TGG | + | chr3_1:90176078-90176097 | None:intergenic | 25.0% |
| !!! | GTTTAGAATCTTTTATGAGA+AGG | - | chr3_1:90176334-90176353 | Msa0386450:intron | 25.0% |
| ! | CATGTAATAACAGAAAATCT+TGG | + | chr3_1:90176543-90176562 | None:intergenic | 25.0% |
| ! | ATCTATCTATCTATCTATCA+AGG | + | chr3_1:90177136-90177155 | None:intergenic | 25.0% |
| !!! | AAACTTATGAGCCATTTTTT+GGG | + | chr3_1:90177183-90177202 | None:intergenic | 25.0% |
| !!! | AAAACTTATGAGCCATTTTT+TGG | + | chr3_1:90177184-90177203 | None:intergenic | 25.0% |
| !!! | ATACTGACTTTAAGAAACAA+AGG | - | chr3_1:90177445-90177464 | Msa0386450:intron | 25.0% |
| ! | ACAACAAATGACAATAAGAA+GGG | + | chr3_1:90177811-90177830 | None:intergenic | 25.0% |
| !!! | CATTTGTTGTGTTTATACAT+TGG | - | chr3_1:90177821-90177840 | Msa0386450:intron | 25.0% |
| ! | TTATGATGCAAGTAAGTTAT+AGG | + | chr3_1:90177972-90177991 | None:intergenic | 25.0% |
| ! | ATTTATATCTGTTTCACTGT+TGG | - | chr3_1:90178128-90178147 | Msa0386450:intron | 25.0% |
| ! | GTGAAATAAAAGATAGTAGA+TGG | + | chr3_1:90178159-90178178 | None:intergenic | 25.0% |
| !!! | ACGAAACTTGTTATAATGAA+GGG | + | chr3_1:90178204-90178223 | None:intergenic | 25.0% |
| !!! | AACGAAACTTGTTATAATGA+AGG | + | chr3_1:90178205-90178224 | None:intergenic | 25.0% |
| !!! | GTATTGATTCACAAAATAGT+AGG | + | chr3_1:90178437-90178456 | None:intergenic | 25.0% |
| !!! | ATTAATGGTTAAATGGATTG+TGG | + | chr3_1:90178535-90178554 | None:intergenic | 25.0% |
| !! | TGAAATCTGAAATAATTGAG+AGG | - | chr3_1:90178565-90178584 | Msa0386450:intron | 25.0% |
| ! | TTAATGATGCACTTTGAATT+TGG | + | chr3_1:90178808-90178827 | None:intergenic | 25.0% |
| ! | AGATGAAAATCATTTAGCTA+TGG | + | chr3_1:90178857-90178876 | None:intergenic | 25.0% |
| !! | ATAGCTAAATGATTTTCATC+TGG | - | chr3_1:90178856-90178875 | Msa0386450:intron | 25.0% |
| ! | TACATTAAAGGACATGAATT+GGG | + | chr3_1:90178978-90178997 | None:intergenic | 25.0% |
| ! | ATACATTAAAGGACATGAAT+TGG | + | chr3_1:90178979-90178998 | None:intergenic | 25.0% |
| ! | CTGCAATTATGATACATTAA+AGG | + | chr3_1:90178990-90179009 | None:intergenic | 25.0% |
| ! | TGGATCATGAAATACAAATA+GGG | + | chr3_1:90179372-90179391 | None:intergenic | 25.0% |
| ! | TTGGATCATGAAATACAAAT+AGG | + | chr3_1:90179373-90179392 | None:intergenic | 25.0% |
| !! | GATCCAAAAAAAATCTTTTC+AGG | - | chr3_1:90179386-90179405 | Msa0386450:intron | 25.0% |
| !! | TCCAAAAAAAATCTTTTCAG+GGG | - | chr3_1:90179388-90179407 | Msa0386450:intron | 25.0% |
| ! | CATAATCGCTCAATTATTTA+AGG | - | chr3_1:90179459-90179478 | Msa0386450:CDS | 25.0% |
| ! | ATAAAAACATAAACCAAGGA+AGG | + | chr3_1:90179560-90179579 | None:intergenic | 25.0% |
| ! | CGTAATAAAAACATAAACCA+AGG | + | chr3_1:90179564-90179583 | None:intergenic | 25.0% |
| !!! | TAGTTTTAACTAAACCAACA+GGG | + | chr3_1:90180112-90180131 | None:intergenic | 25.0% |
| !!! | ATAGTTTTAACTAAACCAAC+AGG | + | chr3_1:90180113-90180132 | None:intergenic | 25.0% |
| ! | ATCAATGATTTATTCTCTCT+AGG | - | chr3_1:90180147-90180166 | Msa0386450:five_prime_UTR | 25.0% |
| AATTGAAATGGAAGAAACGA+AGG | - | chr3_1:90174361-90174380 | Msa0386450:three_prime_UTR | 30.0% | |
| TTCTTTCTCTTTCTCTTTCT+CGG | + | chr3_1:90174390-90174409 | None:intergenic | 30.0% | |
| GAAAACGAAGAATGGATAAT+TGG | + | chr3_1:90174496-90174515 | None:intergenic | 30.0% | |
| GATTCAATGAAAACGAAGAA+TGG | + | chr3_1:90174504-90174523 | None:intergenic | 30.0% | |
| GAGAATTAATTAGAGTAACG+CGG | + | chr3_1:90174576-90174595 | None:intergenic | 30.0% | |
| !! | AGTAAGTAGGGTTTTGTAAA+GGG | + | chr3_1:90174748-90174767 | None:intergenic | 30.0% |
| !! | ACGTTCTTAACTTTAGGTTT+TGG | + | chr3_1:90174934-90174953 | None:intergenic | 30.0% |
| TCTGTAACGTTCTTAACTTT+AGG | + | chr3_1:90174940-90174959 | None:intergenic | 30.0% | |
| GAAGTCAATAATAACAATGC+TGG | - | chr3_1:90174958-90174977 | Msa0386450:CDS | 30.0% | |
| AATGGGACTTGATAAAACTT+GGG | + | chr3_1:90175176-90175195 | None:intergenic | 30.0% | |
| TGAAAATACTTGCGAGAAAA+AGG | + | chr3_1:90175256-90175275 | None:intergenic | 30.0% | |
| ! | TTCTCGCAAGTATTTTCAAA+TGG | - | chr3_1:90175258-90175277 | Msa0386450:intron | 30.0% |
| GGCTAAATGCTGAATATATA+AGG | - | chr3_1:90175327-90175346 | Msa0386450:intron | 30.0% | |
| AAATGCTGAATATATAAGGG+AGG | - | chr3_1:90175331-90175350 | Msa0386450:intron | 30.0% | |
| TTCAAAACTAGTATACGTCA+CGG | + | chr3_1:90175456-90175475 | None:intergenic | 30.0% | |
| ATGAGCAATAATGAAGCAAA+TGG | + | chr3_1:90175589-90175608 | None:intergenic | 30.0% | |
| TGCAGTTACCTACATATATT+CGG | + | chr3_1:90176015-90176034 | None:intergenic | 30.0% | |
| GTAAGATAATGAACAGCAAA+GGG | + | chr3_1:90176269-90176288 | None:intergenic | 30.0% | |
| AGTAAGATAATGAACAGCAA+AGG | + | chr3_1:90176270-90176289 | None:intergenic | 30.0% | |
| TGAAAAATCTCAATTTGTGC+AGG | - | chr3_1:90176656-90176675 | Msa0386450:intron | 30.0% | |
| ! | AAAAGCATAAGAGAGAGATT+GGG | - | chr3_1:90176694-90176713 | Msa0386450:intron | 30.0% |
| ATGAAATCATATAACCAGAG+GGG | + | chr3_1:90176795-90176814 | None:intergenic | 30.0% | |
| CATGAAATCATATAACCAGA+GGG | + | chr3_1:90176796-90176815 | None:intergenic | 30.0% | |
| ACATGAAATCATATAACCAG+AGG | + | chr3_1:90176797-90176816 | None:intergenic | 30.0% | |
| ATGATTTCATGTCTACGTAT+AGG | - | chr3_1:90176805-90176824 | Msa0386450:intron | 30.0% | |
| GTTATACTCATATCTTGCAT+GGG | - | chr3_1:90176888-90176907 | Msa0386450:CDS | 30.0% | |
| GAAAAGATAAGGAACTGAAT+GGG | - | chr3_1:90177069-90177088 | Msa0386450:intron | 30.0% | |
| !! | ATGGGTTTTTGTTTATGATC+AGG | - | chr3_1:90177087-90177106 | Msa0386450:intron | 30.0% |
| !! | TGGGTTTTTGTTTATGATCA+GGG | - | chr3_1:90177088-90177107 | Msa0386450:intron | 30.0% |
| ! | TTTCATTTCTAGGTATTCGT+TGG | + | chr3_1:90177309-90177328 | None:intergenic | 30.0% |
| !! | GTTTCTTTGAAACTGACAAT+TGG | - | chr3_1:90177354-90177373 | Msa0386450:intron | 30.0% |
| ! | GACTTTAAGAAACAAAGGAA+AGG | - | chr3_1:90177450-90177469 | Msa0386450:intron | 30.0% |
| CAACAAATGACAATAAGAAG+GGG | + | chr3_1:90177810-90177829 | None:intergenic | 30.0% | |
| CACAACAAATGACAATAAGA+AGG | + | chr3_1:90177812-90177831 | None:intergenic | 30.0% | |
| !! | TTTAGGTTCTTTTCACGTTT+TGG | + | chr3_1:90177912-90177931 | None:intergenic | 30.0% |
| !!! | TGAGCATACCGATATTTTTT+AGG | + | chr3_1:90177929-90177948 | None:intergenic | 30.0% |
| AGTTATAGGATAGTCAATGT+TGG | + | chr3_1:90177958-90177977 | None:intergenic | 30.0% | |
| GTCTCATATTGGATAAGATA+AGG | - | chr3_1:90178600-90178619 | Msa0386450:CDS | 30.0% | |
| CTACAAAATCAGCTTATAGA+GGG | + | chr3_1:90178693-90178712 | None:intergenic | 30.0% | |
| !! | CTCTATAAGCTGATTTTGTA+GGG | - | chr3_1:90178692-90178711 | Msa0386450:intron | 30.0% |
| ! | CTAAATGATTTTCATCTGGT+AGG | - | chr3_1:90178860-90178879 | Msa0386450:intron | 30.0% |
| ATACTTCAAAACAATCCTTC+TGG | + | chr3_1:90179067-90179086 | None:intergenic | 30.0% | |
| !! | ATCCTTTGATATTTTTGTGC+TGG | - | chr3_1:90179145-90179164 | Msa0386450:intron | 30.0% |
| TACCAGCACAAAAATATCAA+AGG | + | chr3_1:90179150-90179169 | None:intergenic | 30.0% | |
| !!! | ACCCCTGAAAAGATTTTTTT+TGG | + | chr3_1:90179392-90179411 | None:intergenic | 30.0% |
| ATCGCTCAATTATTTAAGGA+TGG | - | chr3_1:90179463-90179482 | Msa0386450:CDS | 30.0% | |
| ! | TGTTTTCACTTGCTTAGTTT+TGG | - | chr3_1:90179487-90179506 | Msa0386450:CDS | 30.0% |
| CAAGGAAGGAAAAATCATAA+AGG | + | chr3_1:90179546-90179565 | None:intergenic | 30.0% | |
| ! | CTTTATGATTTTTCCTTCCT+TGG | - | chr3_1:90179544-90179563 | Msa0386450:CDS | 30.0% |
| !! | ATAGAGTTACCTTTTTGAAG+GGG | + | chr3_1:90179686-90179705 | None:intergenic | 30.0% |
| ! | GATAGAGTTACCTTTTTGAA+GGG | + | chr3_1:90179687-90179706 | None:intergenic | 30.0% |
| ! | AGATAGAGTTACCTTTTTGA+AGG | + | chr3_1:90179688-90179707 | None:intergenic | 30.0% |
| !! | TTGGCTTGTGATTTGAAAAT+GGG | - | chr3_1:90179851-90179870 | Msa0386450:exon | 30.0% |
| AATGGGTAAATGAAATTAGC+TGG | - | chr3_1:90179868-90179887 | Msa0386450:intron | 30.0% | |
| !!! | TTAGCTGGTTTTTTTTTTCC+AGG | - | chr3_1:90179883-90179902 | Msa0386450:intron | 30.0% |
| AATTATAGACAGTGAAAGCA+TGG | - | chr3_1:90180065-90180084 | Msa0386450:five_prime_UTR | 30.0% | |
| TCTTTCTCTTTCTCTTTCTC+GGG | + | chr3_1:90174389-90174408 | None:intergenic | 35.0% | |
| !! | TGAGTGCTGATATTCACAAA+CGG | - | chr3_1:90174437-90174456 | Msa0386450:three_prime_UTR | 35.0% |
| !! | GAGTAAGTAGGGTTTTGTAA+AGG | + | chr3_1:90174749-90174768 | None:intergenic | 35.0% |
| GATTTCTGTCTGAGTAAGTA+GGG | + | chr3_1:90174760-90174779 | None:intergenic | 35.0% | |
| TGATTTCTGTCTGAGTAAGT+AGG | + | chr3_1:90174761-90174780 | None:intergenic | 35.0% | |
| CTTACTCAGACAGAAATCAA+TGG | - | chr3_1:90174762-90174781 | Msa0386450:intron | 35.0% | |
| !! | TGTTGTTGTTGTTCAAGTTG+AGG | + | chr3_1:90174907-90174926 | None:intergenic | 35.0% |
| CAATGGGACTTGATAAAACT+TGG | + | chr3_1:90175177-90175196 | None:intergenic | 35.0% | |
| CATACTTGAGGCAATTCAAT+GGG | + | chr3_1:90175193-90175212 | None:intergenic | 35.0% | |
| ACATACTTGAGGCAATTCAA+TGG | + | chr3_1:90175194-90175213 | None:intergenic | 35.0% | |
| TAACTGTTCTGATCTGATAG+CGG | - | chr3_1:90175489-90175508 | Msa0386450:CDS | 35.0% | |
| ATGCAAAAAACTACGGTGAT+GGG | + | chr3_1:90175629-90175648 | None:intergenic | 35.0% | |
| AATGCAAAAAACTACGGTGA+TGG | + | chr3_1:90175630-90175649 | None:intergenic | 35.0% | |
| !! | ATATAACTTTAGGGCAACAC+AGG | + | chr3_1:90175758-90175777 | None:intergenic | 35.0% |
| GTGCTCATAACTAGTTGTTA+TGG | - | chr3_1:90176182-90176201 | Msa0386450:intron | 35.0% | |
| AGTCACACTTGAAATAGTAC+AGG | + | chr3_1:90176575-90176594 | None:intergenic | 35.0% | |
| ! | TTTTCAGACATCAGACACAA+AGG | + | chr3_1:90176642-90176661 | None:intergenic | 35.0% |
| ! | GAAAAGCATAAGAGAGAGAT+TGG | - | chr3_1:90176693-90176712 | Msa0386450:intron | 35.0% |
| AAAGCATAAGAGAGAGATTG+GGG | - | chr3_1:90176695-90176714 | Msa0386450:intron | 35.0% | |
| TGAAATCATATAACCAGAGG+GGG | + | chr3_1:90176794-90176813 | None:intergenic | 35.0% | |
| ! | TATTTTCCTTTGTCGTGGAA+TGG | - | chr3_1:90176852-90176871 | Msa0386450:intron | 35.0% |
| ! | ATTTTCCTTTGTCGTGGAAT+GGG | - | chr3_1:90176853-90176872 | Msa0386450:intron | 35.0% |
| GGTTATACTCATATCTTGCA+TGG | - | chr3_1:90176887-90176906 | Msa0386450:CDS | 35.0% | |
| GCAAAAACTCTTCACATTAC+TGG | - | chr3_1:90176932-90176951 | Msa0386450:CDS | 35.0% | |
| TTCTTTAGCACACAGTTAAG+CGG | - | chr3_1:90177047-90177066 | Msa0386450:intron | 35.0% | |
| ACAGTTAAGCGGAAAAGATA+AGG | - | chr3_1:90177058-90177077 | Msa0386450:intron | 35.0% | |
| GGAAAAGATAAGGAACTGAA+TGG | - | chr3_1:90177068-90177087 | Msa0386450:intron | 35.0% | |
| AGAAACAGAAGCCCAAAAAA+TGG | - | chr3_1:90177169-90177188 | Msa0386450:intron | 35.0% | |
| TGAACTTTCATGTGTACTAG+AGG | - | chr3_1:90177265-90177284 | Msa0386450:intron | 35.0% | |
| GAACTTTCATGTGTACTAGA+GGG | - | chr3_1:90177266-90177285 | Msa0386450:intron | 35.0% | |
| CTGTGCAAGAAAATACAAAG+AGG | + | chr3_1:90177868-90177887 | None:intergenic | 35.0% | |
| ! | CTCTTTGTATTTTCTTGCAC+AGG | - | chr3_1:90177866-90177885 | Msa0386450:intron | 35.0% |
| !! | TTCTTTTCACGTTTTGGTGT+GGG | + | chr3_1:90177906-90177925 | None:intergenic | 35.0% |
| CTTCGTTGCTTCAATGAATT+AGG | - | chr3_1:90177995-90178014 | Msa0386450:intron | 35.0% | |
| ATAATGAAGGGAACTCACAT+GGG | + | chr3_1:90178192-90178211 | None:intergenic | 35.0% | |
| TATAATGAAGGGAACTCACA+TGG | + | chr3_1:90178193-90178212 | None:intergenic | 35.0% | |
| ACCTGAATAACATATGGACA+GGG | + | chr3_1:90178370-90178389 | None:intergenic | 35.0% | |
| AAAATAGTAGGGAGGAAAGA+TGG | + | chr3_1:90178425-90178444 | None:intergenic | 35.0% | |
| TGATTCACAAAATAGTAGGG+AGG | + | chr3_1:90178433-90178452 | None:intergenic | 35.0% | |
| ATCAATACACAGAGCAAATG+TGG | - | chr3_1:90178449-90178468 | Msa0386450:intron | 35.0% | |
| ! | TATTTTGCATGATGTCAGTG+TGG | - | chr3_1:90178488-90178507 | Msa0386450:intron | 35.0% |
| ! | TGTGGTGTCAGTAATATAGA+TGG | + | chr3_1:90178517-90178536 | None:intergenic | 35.0% |
| AGCTGTTAAGAGTCTCATAT+TGG | - | chr3_1:90178589-90178608 | Msa0386450:CDS | 35.0% | |
| TTGAAAATGCGTTTACAGGT+AGG | - | chr3_1:90178624-90178643 | Msa0386450:intron | 35.0% | |
| ACAAAACCGGATTATAGAGA+GGG | + | chr3_1:90178656-90178675 | None:intergenic | 35.0% | |
| TACAAAACCGGATTATAGAG+AGG | + | chr3_1:90178657-90178676 | None:intergenic | 35.0% | |
| !! | TCTCTATAATCCGGTTTTGT+AGG | - | chr3_1:90178656-90178675 | Msa0386450:intron | 35.0% |
| CTAACTCATACCTACAAAAC+CGG | + | chr3_1:90178669-90178688 | None:intergenic | 35.0% | |
| CCTACAAAATCAGCTTATAG+AGG | + | chr3_1:90178694-90178713 | None:intergenic | 35.0% | |
| !! | CCTCTATAAGCTGATTTTGT+AGG | - | chr3_1:90178691-90178710 | Msa0386450:intron | 35.0% |
| !! | ATAAGCTGATTTTGTAGGGA+TGG | - | chr3_1:90178696-90178715 | Msa0386450:intron | 35.0% |
| !! | TAAGCTGATTTTGTAGGGAT+GGG | - | chr3_1:90178697-90178716 | Msa0386450:intron | 35.0% |
| AAAGTCTATCCAAGATGCTT+TGG | - | chr3_1:90178750-90178769 | Msa0386450:intron | 35.0% | |
| AAGTCTATCCAAGATGCTTT+GGG | - | chr3_1:90178751-90178770 | Msa0386450:intron | 35.0% | |
| TGATGCACTTTGAATTTGGA+GGG | + | chr3_1:90178804-90178823 | None:intergenic | 35.0% | |
| ATGATGCACTTTGAATTTGG+AGG | + | chr3_1:90178805-90178824 | None:intergenic | 35.0% | |
| ! | ATGATTTTCATCTGGTAGGT+TGG | - | chr3_1:90178864-90178883 | Msa0386450:intron | 35.0% |
| ! | AAGTATATGCTCTAGTTCCT+GGG | - | chr3_1:90179081-90179100 | Msa0386450:CDS | 35.0% |
| !! | TAAAGATAACGGAACTACAG+AGG | + | chr3_1:90179126-90179145 | None:intergenic | 35.0% |
| GTTGTCCAACCTAGTAATTT+CGG | + | chr3_1:90179257-90179276 | None:intergenic | 35.0% | |
| ! | ATTTGATGACATGACCTTGA+TGG | - | chr3_1:90179323-90179342 | Msa0386450:intron | 35.0% |
| !! | TTCTCTAAAGTGAACAAGAG+TGG | - | chr3_1:90179413-90179432 | Msa0386450:intron | 35.0% |
| TTGAGCGATTATGAACACAA+TGG | + | chr3_1:90179452-90179471 | None:intergenic | 35.0% | |
| ACGATTGATTGAATGAATCC+AGG | - | chr3_1:90179581-90179600 | Msa0386450:intron | 35.0% | |
| TGATTGAATGAATCCAGGTA+CGG | - | chr3_1:90179586-90179605 | Msa0386450:intron | 35.0% | |
| AGAAAATGCTGACAATCCAT+GGG | - | chr3_1:90179653-90179672 | Msa0386450:intron | 35.0% | |
| !! | TAGAGTTACCTTTTTGAAGG+GGG | + | chr3_1:90179685-90179704 | None:intergenic | 35.0% |
| !! | CTTGGCTTGTGATTTGAAAA+TGG | - | chr3_1:90179850-90179869 | Msa0386450:exon | 35.0% |
| AACTAACAACAGCAGATGTT+TGG | + | chr3_1:90179940-90179959 | None:intergenic | 35.0% | |
| GTTTCTCGCATATTCTCAAA+AGG | - | chr3_1:90180034-90180053 | Msa0386450:five_prime_UTR | 35.0% | |
| AGGTAAAATACCAAATGCAC+TGG | - | chr3_1:90180167-90180186 | Msa0386450:five_prime_UTR | 35.0% | |
| ATTCTCTCGCATTCTCAACA+AGG | - | chr3_1:90174633-90174652 | Msa0386450:exon | 40.0% | |
| ATGAGAAAGAGAAACGACGA+CGG | + | chr3_1:90174676-90174695 | None:intergenic | 40.0% | |
| ACTCAGACAGAAATCAATGG+AGG | - | chr3_1:90174765-90174784 | Msa0386450:intron | 40.0% | |
| CTCAGACAGAAATCAATGGA+GGG | - | chr3_1:90174766-90174785 | Msa0386450:intron | 40.0% | |
| ATCAATGGAGGGTCATGAAA+TGG | - | chr3_1:90174777-90174796 | Msa0386450:intron | 40.0% | |
| !! | TTGTTCAAGTTGAGGAGTGA+GGG | + | chr3_1:90174899-90174918 | None:intergenic | 40.0% |
| CAATAATAACAATGCTGGCG+AGG | - | chr3_1:90174963-90174982 | Msa0386450:CDS | 40.0% | |
| ATGCTCGAGCTCTTTCATAA+AGG | + | chr3_1:90175120-90175139 | None:intergenic | 40.0% | |
| CCTTACGGCATTAGGTATAT+GGG | + | chr3_1:90175365-90175384 | None:intergenic | 40.0% | |
| ACCTTACGGCATTAGGTATA+TGG | + | chr3_1:90175366-90175385 | None:intergenic | 40.0% | |
| ! | ACCTAATGCCGTAAGGTTTT+AGG | - | chr3_1:90175369-90175388 | Msa0386450:intron | 40.0% |
| ACCTAAAACCTTACGGCATT+AGG | + | chr3_1:90175373-90175392 | None:intergenic | 40.0% | |
| !!! | TAATGCCGTAAGGTTTTAGG+TGG | - | chr3_1:90175372-90175391 | Msa0386450:intron | 40.0% |
| CATCTCCACCTAAAACCTTA+CGG | + | chr3_1:90175380-90175399 | None:intergenic | 40.0% | |
| !!! | TAAGGTTTTAGGTGGAGATG+TGG | - | chr3_1:90175380-90175399 | Msa0386450:intron | 40.0% |
| !!! | AAGGTTTTAGGTGGAGATGT+GGG | - | chr3_1:90175381-90175400 | Msa0386450:intron | 40.0% |
| ATACTTCAGAACCACAAGAG+AGG | + | chr3_1:90175416-90175435 | None:intergenic | 40.0% | |
| !! | CGGACTGCTTATTTTCTCAT+CGG | - | chr3_1:90175509-90175528 | Msa0386450:CDS | 40.0% |
| CATTTCCCAATAAGAACGCA+TGG | - | chr3_1:90175681-90175700 | Msa0386450:intron | 40.0% | |
| ! | CAAGTCTTATCACGCTAGAT+GGG | + | chr3_1:90175814-90175833 | None:intergenic | 40.0% |
| TATCTAGTCCTTACTTGGGA+GGG | + | chr3_1:90176073-90176092 | None:intergenic | 40.0% | |
| ATATCTAGTCCTTACTTGGG+AGG | + | chr3_1:90176074-90176093 | None:intergenic | 40.0% | |
| CTGAATACATTCTCTACCAC+AGG | - | chr3_1:90176288-90176307 | Msa0386450:intron | 40.0% | |
| GAGACAATGTGCATCAGTTT+CGG | - | chr3_1:90176421-90176440 | Msa0386450:intron | 40.0% | |
| ! | CATCAGTTTCGGTGTGAATT+TGG | - | chr3_1:90176432-90176451 | Msa0386450:intron | 40.0% |
| AATCCAGAAGTTCTGTCACA+AGG | + | chr3_1:90176505-90176524 | None:intergenic | 40.0% | |
| CACAAAGGAAACAGAAGATC+AGG | + | chr3_1:90176627-90176646 | None:intergenic | 40.0% | |
| GAAATCATATAACCAGAGGG+GGG | + | chr3_1:90176793-90176812 | None:intergenic | 40.0% | |
| ! | TCCTCTATTTTCCTTTGTCG+TGG | - | chr3_1:90176847-90176866 | Msa0386450:intron | 40.0% |
| TCCACGACAAAGGAAAATAG+AGG | + | chr3_1:90176851-90176870 | None:intergenic | 40.0% | |
| ! | GTGGAATGGGTTTGATTCTT+CGG | - | chr3_1:90176866-90176885 | Msa0386450:intron | 40.0% |
| CGTTGGCGTTTGTAAAATGT+AGG | + | chr3_1:90177292-90177311 | None:intergenic | 40.0% | |
| ATTGGCAACAACATCCAAGT+TGG | - | chr3_1:90177372-90177391 | Msa0386450:intron | 40.0% | |
| CCAATGACTTATGTCCAACT+TGG | + | chr3_1:90177389-90177408 | None:intergenic | 40.0% | |
| ! | CCAAGTTGGACATAAGTCAT+TGG | - | chr3_1:90177386-90177405 | Msa0386450:intron | 40.0% |
| CTGGATATCACATCCATTAC+TGG | - | chr3_1:90177499-90177518 | Msa0386450:intron | 40.0% | |
| TTTATCAGCATGGCCAGTAA+TGG | + | chr3_1:90177515-90177534 | None:intergenic | 40.0% | |
| CCATGCTGATAAATGCAGAT+GGG | - | chr3_1:90177522-90177541 | Msa0386450:intron | 40.0% | |
| TGATAAATGCAGATGGGTGT+GGG | - | chr3_1:90177528-90177547 | Msa0386450:intron | 40.0% | |
| CAAGAGGCTTTACAGTTTGA+GGG | + | chr3_1:90177566-90177585 | None:intergenic | 40.0% | |
| ACAAGAGGCTTTACAGTTTG+AGG | + | chr3_1:90177567-90177586 | None:intergenic | 40.0% | |
| !! | CTCCTTGCTTTTCATTTTGC+CGG | + | chr3_1:90177608-90177627 | None:intergenic | 40.0% |
| TTTGTAGACCGCTGTTTATC+AGG | - | chr3_1:90177650-90177669 | Msa0386450:intron | 40.0% | |
| !! | GTTCTTTTCACGTTTTGGTG+TGG | + | chr3_1:90177907-90177926 | None:intergenic | 40.0% |
| TAATGAAGGGAACTCACATG+GGG | + | chr3_1:90178191-90178210 | None:intergenic | 40.0% | |
| CCTGAATAACATATGGACAG+GGG | + | chr3_1:90178369-90178388 | None:intergenic | 40.0% | |
| GACCTGAATAACATATGGAC+AGG | + | chr3_1:90178371-90178390 | None:intergenic | 40.0% | |
| CCAAGGACCTGAATAACATA+TGG | + | chr3_1:90178376-90178395 | None:intergenic | 40.0% | |
| CCATATGTTATTCAGGTCCT+TGG | - | chr3_1:90178373-90178392 | Msa0386450:intron | 40.0% | |
| TACACAGAGCAAATGTGGAT+TGG | - | chr3_1:90178454-90178473 | Msa0386450:intron | 40.0% | |
| ACACAGAGCAAATGTGGATT+GGG | - | chr3_1:90178455-90178474 | Msa0386450:intron | 40.0% | |
| AGGCTTGAAAATGCGTTTAC+AGG | - | chr3_1:90178620-90178639 | Msa0386450:intron | 40.0% | |
| AAAATGCGTTTACAGGTAGG+AGG | - | chr3_1:90178627-90178646 | Msa0386450:intron | 40.0% | |
| TTAGACCCAACCAAATTCCA+AGG | - | chr3_1:90178720-90178739 | Msa0386450:intron | 40.0% | |
| TTTGATGCCACCTTGGAATT+TGG | + | chr3_1:90178733-90178752 | None:intergenic | 40.0% | |
| ! | TGCTTTGGGTCATCTGTTAT+CGG | - | chr3_1:90178765-90178784 | Msa0386450:intron | 40.0% |
| ATTGGGTGAAGATCAATGTG+CGG | - | chr3_1:90178920-90178939 | Msa0386450:intron | 40.0% | |
| TTGCTATATCCATGTCCAGA+AGG | - | chr3_1:90179049-90179068 | Msa0386450:intron | 40.0% | |
| CAAAACAATCCTTCTGGACA+TGG | + | chr3_1:90179061-90179080 | None:intergenic | 40.0% | |
| ! | GAAGTATATGCTCTAGTTCC+TGG | - | chr3_1:90179080-90179099 | Msa0386450:CDS | 40.0% |
| GATTGAATGAATCCAGGTAC+GGG | - | chr3_1:90179587-90179606 | Msa0386450:intron | 40.0% | |
| GTTATAACAAGTCGTCCAAC+TGG | + | chr3_1:90179624-90179643 | None:intergenic | 40.0% | |
| !! | GTTGGACGACTTGTTATAAC+TGG | - | chr3_1:90179624-90179643 | Msa0386450:intron | 40.0% |
| !! | CATGGATTGTCAGCATTTTC+TGG | + | chr3_1:90179654-90179673 | None:intergenic | 40.0% |
| CAGAAAATGCTGACAATCCA+TGG | - | chr3_1:90179652-90179671 | Msa0386450:intron | 40.0% | |
| GAAAATGCTGACAATCCATG+GGG | - | chr3_1:90179654-90179673 | Msa0386450:intron | 40.0% | |
| !! | TCTGCTGTTGTTAGTTTGCA+TGG | - | chr3_1:90179944-90179963 | Msa0386450:intron | 40.0% |
| ! | GAGAAACCAATCATTTTCCG+GGG | + | chr3_1:90180021-90180040 | None:intergenic | 40.0% |
| ! | CGAGAAACCAATCATTTTCC+GGG | + | chr3_1:90180022-90180041 | None:intergenic | 40.0% |
| ! | GCGAGAAACCAATCATTTTC+CGG | + | chr3_1:90180023-90180042 | None:intergenic | 40.0% |
| ! | AGTGAAAGCATGGTTATGCT+AGG | - | chr3_1:90180075-90180094 | Msa0386450:five_prime_UTR | 40.0% |
| TGGGTGAGTCACGTTTGTTT+GGG | + | chr3_1:90174476-90174495 | None:intergenic | 45.0% | |
| TTGGGTGAGTCACGTTTGTT+TGG | + | chr3_1:90174477-90174496 | None:intergenic | 45.0% | |
| !! | GTTGTTCAAGTTGAGGAGTG+AGG | + | chr3_1:90174900-90174919 | None:intergenic | 45.0% |
| ATGGCTGCTTATGATGAAGC+CGG | - | chr3_1:90175074-90175093 | Msa0386450:intron | 45.0% | |
| ATAAAGGCTTCTCGCTCCAT+AGG | + | chr3_1:90175104-90175123 | None:intergenic | 45.0% | |
| TCGAGCATTTCTACAGATCG+AGG | - | chr3_1:90175132-90175151 | Msa0386450:intron | 45.0% | |
| TTTCTACAGATCGAGGTCCT+TGG | - | chr3_1:90175139-90175158 | Msa0386450:intron | 45.0% | |
| GGGACTTGATAAAACTTGGG+AGG | + | chr3_1:90175173-90175192 | None:intergenic | 45.0% | |
| GTCCCACATCAACTGTGAAT+TGG | - | chr3_1:90175303-90175322 | Msa0386450:intron | 45.0% | |
| ! | CGCCAATTCACAGTTGATGT+GGG | + | chr3_1:90175308-90175327 | None:intergenic | 45.0% |
| CCACATCAACTGTGAATTGG+CGG | - | chr3_1:90175306-90175325 | Msa0386450:intron | 45.0% | |
| CCCATATACCTAATGCCGTA+AGG | - | chr3_1:90175362-90175381 | Msa0386450:intron | 45.0% | |
| TACGTCACGGAGAGCAATAA+CGG | + | chr3_1:90175443-90175462 | None:intergenic | 45.0% | |
| !! | CTTATTTTCTCATCGGCTGC+AGG | - | chr3_1:90175516-90175535 | Msa0386450:CDS | 45.0% |
| TGGAGAGCTGTTATCAGACT+AGG | - | chr3_1:90175542-90175561 | Msa0386450:CDS | 45.0% | |
| AGAGCTGTTATCAGACTAGG+TGG | - | chr3_1:90175545-90175564 | Msa0386450:CDS | 45.0% | |
| CTGCACCATGCGTTCTTATT+GGG | + | chr3_1:90175689-90175708 | None:intergenic | 45.0% | |
| ACTGCACCATGCGTTCTTAT+TGG | + | chr3_1:90175690-90175709 | None:intergenic | 45.0% | |
| ATAAGAACGCATGGTGCAGT+TGG | - | chr3_1:90175690-90175709 | Msa0386450:intron | 45.0% | |
| !! | CTTTAGGGCAACACAGGTAT+CGG | + | chr3_1:90175752-90175771 | None:intergenic | 45.0% |
| ! | CCAAGTCTTATCACGCTAGA+TGG | + | chr3_1:90175815-90175834 | None:intergenic | 45.0% |
| CCATCTAGCGTGATAAGACT+TGG | - | chr3_1:90175812-90175831 | Msa0386450:intron | 45.0% | |
| AGGTAACTGCATCGAAGTTG+TGG | - | chr3_1:90176024-90176043 | Msa0386450:intron | 45.0% | |
| TAACTGCATCGAAGTTGTGG+CGG | - | chr3_1:90176027-90176046 | Msa0386450:intron | 45.0% | |
| ACAGCAGAAATGCGAGATGA+CGG | + | chr3_1:90176129-90176148 | None:intergenic | 45.0% | |
| GCCTCTATATCACCATCTCA+TGG | - | chr3_1:90176469-90176488 | Msa0386450:intron | 45.0% | |
| GCCATGAGATGGTGATATAG+AGG | + | chr3_1:90176473-90176492 | None:intergenic | 45.0% | |
| TGTCCTTGTGACAGAACTTC+TGG | - | chr3_1:90176499-90176518 | Msa0386450:intron | 45.0% | |
| ATCAGGCAAGTGGCTAGAAA+AGG | + | chr3_1:90176610-90176629 | None:intergenic | 45.0% | |
| GAAACAGAAGATCAGGCAAG+TGG | + | chr3_1:90176620-90176639 | None:intergenic | 45.0% | |
| TTTCCACACTCGATGGTTGA+TGG | + | chr3_1:90176746-90176765 | None:intergenic | 45.0% | |
| ACCATCGAGTGTGGAAAAAG+AGG | - | chr3_1:90176749-90176768 | Msa0386450:intron | 45.0% | |
| ! | ACCTCTTTTTCCACACTCGA+TGG | + | chr3_1:90176753-90176772 | None:intergenic | 45.0% |
| TCAAACCCATTCCACGACAA+AGG | + | chr3_1:90176861-90176880 | None:intergenic | 45.0% | |
| TGCATGGGAAACAGAAGTTG+AGG | - | chr3_1:90176903-90176922 | Msa0386450:CDS | 45.0% | |
| ! | AGCACTGTTGGCTACTCTAT+TGG | + | chr3_1:90177481-90177500 | None:intergenic | 45.0% |
| AATAGAGTAGCCAACAGTGC+TGG | - | chr3_1:90177480-90177499 | Msa0386450:intron | 45.0% | |
| GATGTGATATCCAGCACTGT+TGG | + | chr3_1:90177493-90177512 | None:intergenic | 45.0% | |
| GCCATGCTGATAAATGCAGA+TGG | - | chr3_1:90177521-90177540 | Msa0386450:intron | 45.0% | |
| CCCATCTGCATTTATCAGCA+TGG | + | chr3_1:90177525-90177544 | None:intergenic | 45.0% | |
| CTGATAAATGCAGATGGGTG+TGG | - | chr3_1:90177527-90177546 | Msa0386450:intron | 45.0% | |
| ! | ATTTTGCCGGAGATAACCAG+CGG | + | chr3_1:90177595-90177614 | None:intergenic | 45.0% |
| CTCCGGCAAAATGAAAAGCA+AGG | - | chr3_1:90177603-90177622 | Msa0386450:intron | 45.0% | |
| AGTCAGCTGTTAAGGTCTGT+TGG | - | chr3_1:90177766-90177785 | Msa0386450:intron | 45.0% | |
| GTCAGCTGTTAAGGTCTGTT+GGG | - | chr3_1:90177767-90177786 | Msa0386450:intron | 45.0% | |
| AACAAACAGAGAACACCGTC+TGG | - | chr3_1:90178025-90178044 | Msa0386450:intron | 45.0% | |
| GACAGAGCTGCAAACATAGA+AGG | - | chr3_1:90178055-90178074 | Msa0386450:intron | 45.0% | |
| CTGCAAACATAGAAGGAGAC+AGG | - | chr3_1:90178062-90178081 | Msa0386450:intron | 45.0% | |
| GAGACAGGCAGTTAAGTTAC+TGG | - | chr3_1:90178077-90178096 | Msa0386450:intron | 45.0% | |
| AATGAAGGGAACTCACATGG+GGG | + | chr3_1:90178190-90178209 | None:intergenic | 45.0% | |
| CCCCTGTCCATATGTTATTC+AGG | - | chr3_1:90178366-90178385 | Msa0386450:intron | 45.0% | |
| AACCTTAAGAGCAGTCTCCA+AGG | + | chr3_1:90178393-90178412 | None:intergenic | 45.0% | |
| ! | CACAGAGCAAATGTGGATTG+GGG | - | chr3_1:90178456-90178475 | Msa0386450:intron | 45.0% |
| AGGCATCCCTCTCTATAATC+CGG | - | chr3_1:90178647-90178666 | Msa0386450:intron | 45.0% | |
| TGCCACCTTGGAATTTGGTT+GGG | + | chr3_1:90178728-90178747 | None:intergenic | 45.0% | |
| ATGCCACCTTGGAATTTGGT+TGG | + | chr3_1:90178729-90178748 | None:intergenic | 45.0% | |
| GATAGACTTTGATGCCACCT+TGG | + | chr3_1:90178740-90178759 | None:intergenic | 45.0% | |
| ! | ACAGATGACCCAAAGCATCT+TGG | + | chr3_1:90178762-90178781 | None:intergenic | 45.0% |
| ! | GCTTTGGGTCATCTGTTATC+GGG | - | chr3_1:90178766-90178785 | Msa0386450:intron | 45.0% |
| TCATCTGTTATCGGGTCACT+TGG | - | chr3_1:90178774-90178793 | Msa0386450:intron | 45.0% | |
| CATCTGTTATCGGGTCACTT+GGG | - | chr3_1:90178775-90178794 | Msa0386450:intron | 45.0% | |
| TGATCTTCACCCAATCAGCT+GGG | + | chr3_1:90178915-90178934 | None:intergenic | 45.0% | |
| TTGATCTTCACCCAATCAGC+TGG | + | chr3_1:90178916-90178935 | None:intergenic | 45.0% | |
| TTGGGTGAAGATCAATGTGC+GGG | - | chr3_1:90178921-90178940 | Msa0386450:intron | 45.0% | |
| GAAGATCAATGTGCGGGAAA+CGG | - | chr3_1:90178927-90178946 | Msa0386450:intron | 45.0% | |
| CTAGCGATGCCGAAATTACT+AGG | - | chr3_1:90179245-90179264 | Msa0386450:intron | 45.0% | |
| CGATGCCGAAATTACTAGGT+TGG | - | chr3_1:90179249-90179268 | Msa0386450:intron | 45.0% | |
| TACTTCCAGTCACAACTGTG+AGG | + | chr3_1:90179303-90179322 | None:intergenic | 45.0% | |
| AACAAGTCGTCCAACTGGAT+CGG | + | chr3_1:90179619-90179638 | None:intergenic | 45.0% | |
| GGGTATTACCCCCTTCAAAA+AGG | - | chr3_1:90179674-90179693 | Msa0386450:CDS | 45.0% | |
| ACAACAGCAGATGTTTGGAG+TGG | + | chr3_1:90179935-90179954 | None:intergenic | 45.0% | |
| TTTCCTCCCCGGAAAATGAT+TGG | - | chr3_1:90180012-90180031 | Msa0386450:five_prime_UTR | 45.0% | |
| ! | AAACCAATCATTTTCCGGGG+AGG | + | chr3_1:90180018-90180037 | None:intergenic | 45.0% |
| GCATATTGCACCAGTGCATT+TGG | + | chr3_1:90180180-90180199 | None:intergenic | 45.0% | |
| ! | ATGCACTGGTGCAATATGCT+TGG | - | chr3_1:90180181-90180200 | Msa0386450:five_prime_UTR | 45.0% |
| !! | TATTAAAAAATATAACTTTA+GGG | + | chr3_1:90175767-90175786 | None:intergenic | 5.0% |
| !! | TTATTAAAAAATATAACTTT+AGG | + | chr3_1:90175768-90175787 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAATCAATTTAA+AGG | + | chr3_1:90179021-90179040 | None:intergenic | 5.0% |
| AGAGAAAGAAGAGTGAGCCG+TGG | - | chr3_1:90174400-90174419 | Msa0386450:three_prime_UTR | 50.0% | |
| CTTGGGAGGCTTGAATTCCA+AGG | + | chr3_1:90175159-90175178 | None:intergenic | 50.0% | |
| ! | CCGCCAATTCACAGTTGATG+TGG | + | chr3_1:90175309-90175328 | None:intergenic | 50.0% |
| !! | GTTTTAGGTGGAGATGTGGG+TGG | - | chr3_1:90175384-90175403 | Msa0386450:intron | 50.0% |
| ACGTCACGGAGAGCAATAAC+GGG | + | chr3_1:90175442-90175461 | None:intergenic | 50.0% | |
| ! | TTCTCATCGGCTGCAGGTTA+TGG | - | chr3_1:90175522-90175541 | Msa0386450:CDS | 50.0% |
| CAGACTAGGTGGCTATGAAG+TGG | - | chr3_1:90175556-90175575 | Msa0386450:CDS | 50.0% | |
| TCTTTCCACCCTCCCAAGTA+AGG | - | chr3_1:90176062-90176081 | Msa0386450:intron | 50.0% | |
| CAGCAGAAATGCGAGATGAC+GGG | + | chr3_1:90176128-90176147 | None:intergenic | 50.0% | |
| AGACTGTAGTGCAAGTCCTG+TGG | + | chr3_1:90176307-90176326 | None:intergenic | 50.0% | |
| GGACTTGCACTACAGTCTCA+TGG | - | chr3_1:90176309-90176328 | Msa0386450:intron | 50.0% | |
| GGACAACTCATGCCATGAGA+TGG | + | chr3_1:90176484-90176503 | None:intergenic | 50.0% | |
| ! | GTTGATGGAGTGATCCGACA+GGG | + | chr3_1:90176731-90176750 | None:intergenic | 50.0% |
| ACTCCATCAACCATCGAGTG+TGG | - | chr3_1:90176740-90176759 | Msa0386450:CDS | 50.0% | |
| TAACCAGCGGTCTAGACAAG+AGG | + | chr3_1:90177582-90177601 | None:intergenic | 50.0% | |
| ! | TCTAGACCGCTGGTTATCTC+CGG | - | chr3_1:90177586-90177605 | Msa0386450:intron | 50.0% |
| GGTTCCTGAGTCAGCTGTTA+AGG | - | chr3_1:90177758-90177777 | Msa0386450:intron | 50.0% | |
| ! | CAGACCTTAACAGCTGACTC+AGG | + | chr3_1:90177765-90177784 | None:intergenic | 50.0% |
| ACAGAGAACACCGTCTGGTA+TGG | - | chr3_1:90178030-90178049 | Msa0386450:intron | 50.0% | |
| GCTCTGTCATCCATACCAGA+CGG | + | chr3_1:90178043-90178062 | None:intergenic | 50.0% | |
| GTCCTTGGAGACTGCTCTTA+AGG | - | chr3_1:90178388-90178407 | Msa0386450:intron | 50.0% | |
| GACCCAACCAAATTCCAAGG+TGG | - | chr3_1:90178723-90178742 | Msa0386450:intron | 50.0% | |
| !! | TAGGTTGGTCACAGCAGTAG+TGG | - | chr3_1:90178879-90178898 | Msa0386450:intron | 50.0% |
| !! | GTCACAGCAGTAGTGGACAT+TGG | - | chr3_1:90178886-90178905 | Msa0386450:intron | 50.0% |
| ATCTTCACCCAATCAGCTGG+GGG | + | chr3_1:90178913-90178932 | None:intergenic | 50.0% | |
| GATCTTCACCCAATCAGCTG+GGG | + | chr3_1:90178914-90178933 | None:intergenic | 50.0% | |
| CAGAGGTTACCTCTTCACGA+AGG | + | chr3_1:90179109-90179128 | None:intergenic | 50.0% | |
| ! | TAGGTTGGACAACTTCACCC+AGG | - | chr3_1:90179264-90179283 | Msa0386450:intron | 50.0% |
| ACTTCACCCAGGTTCAAACC+CGG | - | chr3_1:90179275-90179294 | Msa0386450:intron | 50.0% | |
| ! | AGTCACAACTGTGAGGTACC+GGG | + | chr3_1:90179296-90179315 | None:intergenic | 50.0% |
| CAGTCACAACTGTGAGGTAC+CGG | + | chr3_1:90179297-90179316 | None:intergenic | 50.0% | |
| TTGAAGGGGGTAATACCCCA+TGG | + | chr3_1:90179672-90179691 | None:intergenic | 50.0% | |
| TCGCAGGTAAGTTCACAACC+TGG | + | chr3_1:90179904-90179923 | None:intergenic | 50.0% | |
| TGGAGTGGATCAATTCTCGC+AGG | + | chr3_1:90179920-90179939 | None:intergenic | 50.0% | |
| ! | GCTGTGTGAATTTTCCTCCC+CGG | - | chr3_1:90180001-90180020 | Msa0386450:five_prime_UTR | 50.0% |
| ! | AGGAACTAGTCTAGCCCTGT+TGG | - | chr3_1:90180095-90180114 | Msa0386450:five_prime_UTR | 50.0% |
| AAGAAGAGTGAGCCGTGGAG+AGG | - | chr3_1:90174405-90174424 | Msa0386450:three_prime_UTR | 55.0% | |
| TGATGAAGCCGGTACGCCTA+TGG | - | chr3_1:90175085-90175104 | Msa0386450:intron | 55.0% | |
| TTCTCGCTCCATAGGCGTAC+CGG | + | chr3_1:90175096-90175115 | None:intergenic | 55.0% | |
| GGTGGTGTCTTCCTCTCTTG+TGG | - | chr3_1:90175402-90175421 | Msa0386450:intron | 55.0% | |
| TCGAAGTTGTGGCGGTCAGT+AGG | - | chr3_1:90176035-90176054 | Msa0386450:intron | 55.0% | |
| CTAGTCCTTACTTGGGAGGG+TGG | + | chr3_1:90176070-90176089 | None:intergenic | 55.0% | |
| !! | GGTTGATGGAGTGATCCGAC+AGG | + | chr3_1:90176732-90176751 | None:intergenic | 55.0% |
| TATTGCTCTTTGCCCCCCTC+TGG | - | chr3_1:90176778-90176797 | Msa0386450:intron | 55.0% | |
| AAGCCTCTTGTCTAGACCGC+TGG | - | chr3_1:90177576-90177595 | Msa0386450:intron | 55.0% | |
| ACCGCTGTTTATCAGGCTCC+AGG | - | chr3_1:90177657-90177676 | Msa0386450:intron | 55.0% | |
| GCCTGGAGCCTGATAAACAG+CGG | + | chr3_1:90177661-90177680 | None:intergenic | 55.0% | |
| GTTTATCAGGCTCCAGGCTC+AGG | - | chr3_1:90177663-90177682 | Msa0386450:intron | 55.0% | |
| CTGCACGTGCAATGCAAGGT+TGG | - | chr3_1:90177706-90177725 | Msa0386450:intron | 55.0% | |
| TTGGCATGCTCAGCGCCTTA+TGG | - | chr3_1:90177725-90177744 | Msa0386450:intron | 55.0% | |
| TGGCATGCTCAGCGCCTTAT+GGG | - | chr3_1:90177726-90177745 | Msa0386450:intron | 55.0% | |
| GCTCAGCGCCTTATGGGATA+CGG | - | chr3_1:90177732-90177751 | Msa0386450:intron | 55.0% | |
| GAACCTCGCCGTATCCCATA+AGG | + | chr3_1:90177743-90177762 | None:intergenic | 55.0% | |
| GGGGATGCACAAAATCGCTC+TGG | + | chr3_1:90178330-90178349 | None:intergenic | 55.0% | |
| TGGACAGGGGCAGTACCAAT+GGG | + | chr3_1:90178356-90178375 | None:intergenic | 55.0% | |
| ATGGACAGGGGCAGTACCAA+TGG | + | chr3_1:90178357-90178376 | None:intergenic | 55.0% | |
| ACATTGGACCCCCAGCTGAT+TGG | - | chr3_1:90178902-90178921 | Msa0386450:intron | 55.0% | |
| CATTGGACCCCCAGCTGATT+GGG | - | chr3_1:90178903-90178922 | Msa0386450:intron | 55.0% | |
| ATGTGCGGGAAACGGTCAGT+CGG | - | chr3_1:90178935-90178954 | Msa0386450:intron | 55.0% | |
| !! | GAGGTACCGGGTTTGAACCT+GGG | + | chr3_1:90179284-90179303 | None:intergenic | 55.0% |
| !! | TGAGGTACCGGGTTTGAACC+TGG | + | chr3_1:90179285-90179304 | None:intergenic | 55.0% |
| CGGTACCTCACAGTTGTGAC+TGG | - | chr3_1:90179295-90179314 | Msa0386450:intron | 55.0% | |
| GTCGTCCAACTGGATCGGAT+TGG | + | chr3_1:90179614-90179633 | None:intergenic | 55.0% | |
| TGTACGCGTTCCTTTCGAGC+AGG | - | chr3_1:90179976-90179995 | Msa0386450:intron | 55.0% | |
| GTACGCGTTCCTTTCGAGCA+GGG | - | chr3_1:90179977-90179996 | Msa0386450:intron | 55.0% | |
| AAGAGTGAGCCGTGGAGAGG+TGG | - | chr3_1:90174408-90174427 | Msa0386450:three_prime_UTR | 60.0% | |
| TCAGCAGCTCCACCTCTCCA+CGG | + | chr3_1:90174420-90174439 | None:intergenic | 60.0% | |
| TCAGCAGCAGCAGCAGCATC+AGG | + | chr3_1:90174856-90174875 | None:intergenic | 60.0% | |
| GGGGAGTTACAGCTCCCTGT+CGG | - | chr3_1:90176714-90176733 | Msa0386450:CDS | 60.0% | |
| ATCAGGCTCCAGGCTCAGGT+AGG | - | chr3_1:90177667-90177686 | Msa0386450:intron | 60.0% | |
| TCAGGCTCCAGGCTCAGGTA+GGG | - | chr3_1:90177668-90177687 | Msa0386450:intron | 60.0% | |
| TTGTGCATCCCCCCACCCAT+TGG | - | chr3_1:90178338-90178357 | Msa0386450:intron | 60.0% | |
| AGGGGCAGTACCAATGGGTG+GGG | + | chr3_1:90178351-90178370 | None:intergenic | 60.0% | |
| CAGGGGCAGTACCAATGGGT+GGG | + | chr3_1:90178352-90178371 | None:intergenic | 60.0% | |
| ACAGGGGCAGTACCAATGGG+TGG | + | chr3_1:90178353-90178372 | None:intergenic | 60.0% | |
| CGGGAAACGGTCAGTCGGTT+TGG | - | chr3_1:90178940-90178959 | Msa0386450:intron | 60.0% | |
| TCCTGGGCTCCTTCGTGAAG+AGG | - | chr3_1:90179097-90179116 | Msa0386450:intron | 60.0% | |
| ACCTCTTCACGAAGGAGCCC+AGG | + | chr3_1:90179101-90179120 | None:intergenic | 60.0% | |
| TCGGCATCGCTAGTTGCGCT+AGG | + | chr3_1:90179238-90179257 | None:intergenic | 60.0% | |
| ! | GATCGGATTGGACCCGTACC+TGG | + | chr3_1:90179602-90179621 | None:intergenic | 60.0% |
| CGGGTCCAATCCGATCCAGT+TGG | - | chr3_1:90179606-90179625 | Msa0386450:intron | 60.0% | |
| CACACAGCTCCCTGCTCGAA+AGG | + | chr3_1:90179989-90180008 | None:intergenic | 60.0% | |
| GCGGCTGCACGTGCAATGCA+AGG | - | chr3_1:90177702-90177721 | Msa0386450:intron | 65.0% | |
| GCGCCTTATGGGATACGGCG+AGG | - | chr3_1:90177737-90177756 | Msa0386450:intron | 65.0% | |
| GGGCAGTACCAATGGGTGGG+GGG | + | chr3_1:90178349-90178368 | None:intergenic | 65.0% | |
| GGGGCAGTACCAATGGGTGG+GGG | + | chr3_1:90178350-90178369 | None:intergenic | 65.0% | |
| CTCCAGGCTCAGGTAGGGCG+CGG | - | chr3_1:90177673-90177692 | Msa0386450:intron | 70.0% | |
| AGGCTCAGGTAGGGCGCGGA+GGG | - | chr3_1:90177677-90177696 | Msa0386450:intron | 70.0% | |
| AGGTAGGGCGCGGAGGGATG+CGG | - | chr3_1:90177683-90177702 | Msa0386450:intron | 70.0% | |
| CTCCGCGCCCTACCTGAGCC+TGG | + | chr3_1:90177678-90177697 | None:intergenic | 75.0% | |
| CAGGCTCAGGTAGGGCGCGG+AGG | - | chr3_1:90177676-90177695 | Msa0386450:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 90174356 | 90180291 | 90174356 | ID=Msa0386450;Name=Msa0386450 |
| chr3_1 | mRNA | 90174356 | 90180291 | 90174356 | ID=Msa0386450-mRNA-1;Parent=Msa0386450;Name=Msa0386450-mRNA-1;_AED=0.22;_eAED=0.22;_QI=309|0.92|0.92|1|0.76|0.78|14|282|392 |
| chr3_1 | exon | 90174356 | 90174742 | 90174356 | ID=Msa0386450-mRNA-1:exon:24859;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90174952 | 90175044 | 90174952 | ID=Msa0386450-mRNA-1:exon:24858;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90175481 | 90175579 | 90175481 | ID=Msa0386450-mRNA-1:exon:24857;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90175699 | 90175765 | 90175699 | ID=Msa0386450-mRNA-1:exon:24856;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90176561 | 90176630 | 90176561 | ID=Msa0386450-mRNA-1:exon:24855;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90176708 | 90176759 | 90176708 | ID=Msa0386450-mRNA-1:exon:24854;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90176868 | 90176990 | 90176868 | ID=Msa0386450-mRNA-1:exon:24853;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90177877 | 90177969 | 90177877 | ID=Msa0386450-mRNA-1:exon:24852;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90178292 | 90178337 | 90178292 | ID=Msa0386450-mRNA-1:exon:24851;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90178569 | 90178621 | 90178569 | ID=Msa0386450-mRNA-1:exon:24850;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90179070 | 90179109 | 90179070 | ID=Msa0386450-mRNA-1:exon:24849;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90179440 | 90179573 | 90179440 | ID=Msa0386450-mRNA-1:exon:24848;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90179663 | 90179876 | 90179663 | ID=Msa0386450-mRNA-1:exon:24847;Parent=Msa0386450-mRNA-1 |
| chr3_1 | exon | 90179993 | 90180291 | 90179993 | ID=Msa0386450-mRNA-1:exon:24846;Parent=Msa0386450-mRNA-1 |
| chr3_1 | five_prime_UTR | 90179993 | 90180291 | 90179993 | ID=Msa0386450-mRNA-1:five_prime_utr;Parent=Msa0386450-mRNA-1 |
| chr3_1 | five_prime_UTR | 90179867 | 90179876 | 90179867 | ID=Msa0386450-mRNA-1:five_prime_utr;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90179663 | 90179866 | 90179663 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90179440 | 90179573 | 90179440 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90179070 | 90179109 | 90179070 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90178569 | 90178621 | 90178569 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90178292 | 90178337 | 90178292 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90177877 | 90177969 | 90177877 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90176868 | 90176990 | 90176868 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90176708 | 90176759 | 90176708 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90176561 | 90176630 | 90176561 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90175699 | 90175765 | 90175699 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90175481 | 90175579 | 90175481 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90174952 | 90175044 | 90174952 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | CDS | 90174638 | 90174742 | 90174638 | ID=Msa0386450-mRNA-1:cds;Parent=Msa0386450-mRNA-1 |
| chr3_1 | three_prime_UTR | 90174356 | 90174637 | 90174356 | ID=Msa0386450-mRNA-1:three_prime_utr;Parent=Msa0386450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
