Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391200 | AET03929.1 | 87.464 | 351 | 22 | 2 | 1 | 347 | 1 | 333 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391200 | sp|Q8GVE5|TLP2_ARATH | 44.828 | 377 | 160 | 11 | 3 | 347 | 30 | 390 | 2.00e-86 | 269 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391200 | G7LES6 | 87.464 | 351 | 22 | 2 | 1 | 347 | 1 | 333 | 0.0 | 617 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0391200 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391200 | MtrunA17_Chr8g0373351 | 77.522 | 347 | 22 | 2 | 1 | 347 | 1 | 291 | 0.0 | 518 |
| Msa0391200 | MtrunA17_Chr8g0373001 | 57.853 | 382 | 115 | 10 | 3 | 347 | 37 | 409 | 6.96e-132 | 382 |
| Msa0391200 | MtrunA17_Chr5g0404321 | 50.515 | 388 | 138 | 10 | 3 | 347 | 37 | 413 | 3.16e-116 | 343 |
| Msa0391200 | MtrunA17_Chr8g0373361 | 52.520 | 377 | 128 | 9 | 3 | 342 | 42 | 404 | 7.18e-109 | 323 |
| Msa0391200 | MtrunA17_Chr8g0373331 | 48.118 | 372 | 99 | 12 | 3 | 341 | 36 | 346 | 9.63e-90 | 273 |
| Msa0391200 | MtrunA17_Chr1g0155301 | 41.389 | 360 | 160 | 9 | 22 | 347 | 77 | 419 | 1.55e-73 | 233 |
| Msa0391200 | MtrunA17_Chr2g0278511 | 38.947 | 380 | 172 | 12 | 14 | 342 | 49 | 419 | 4.73e-67 | 217 |
| Msa0391200 | MtrunA17_Chr2g0286441 | 38.082 | 365 | 181 | 10 | 12 | 342 | 32 | 385 | 8.71e-66 | 213 |
| Msa0391200 | MtrunA17_Chr1g0201891 | 37.662 | 385 | 175 | 12 | 14 | 342 | 48 | 423 | 1.52e-63 | 208 |
| Msa0391200 | MtrunA17_Chr1g0196071 | 36.461 | 373 | 194 | 9 | 3 | 342 | 32 | 394 | 8.91e-61 | 200 |
| Msa0391200 | MtrunA17_Chr2g0315641 | 38.177 | 351 | 151 | 13 | 22 | 342 | 49 | 363 | 1.46e-54 | 183 |
| Msa0391200 | MtrunA17_Chr2g0315651 | 35.215 | 372 | 168 | 14 | 7 | 342 | 25 | 359 | 3.33e-42 | 150 |
| Msa0391200 | MtrunA17_Chr8g0373341 | 58.871 | 124 | 46 | 2 | 222 | 340 | 197 | 320 | 5.97e-36 | 132 |
| Msa0391200 | MtrunA17_Chr8g0373341 | 42.941 | 170 | 66 | 7 | 1 | 143 | 32 | 197 | 1.48e-24 | 102 |
| Msa0391200 | MtrunA17_Chr1g0156151 | 38.843 | 121 | 58 | 4 | 45 | 153 | 101 | 217 | 5.46e-17 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391200 | AT2G18280.2 | 44.828 | 377 | 160 | 11 | 3 | 347 | 30 | 390 | 2.03e-87 | 269 |
| Msa0391200 | AT2G18280.1 | 44.828 | 377 | 160 | 11 | 3 | 347 | 30 | 390 | 2.03e-87 | 269 |
| Msa0391200 | AT1G47270.3 | 40.584 | 377 | 155 | 11 | 12 | 347 | 37 | 385 | 7.60e-73 | 231 |
| Msa0391200 | AT1G47270.2 | 40.584 | 377 | 155 | 11 | 12 | 347 | 61 | 409 | 8.98e-73 | 231 |
| Msa0391200 | AT1G47270.1 | 40.584 | 377 | 155 | 11 | 12 | 347 | 62 | 410 | 1.01e-72 | 231 |
| Msa0391200 | AT1G25280.1 | 38.889 | 396 | 163 | 14 | 14 | 342 | 54 | 437 | 3.69e-67 | 218 |
| Msa0391200 | AT2G47900.2 | 39.410 | 373 | 171 | 12 | 9 | 342 | 42 | 398 | 8.26e-66 | 213 |
| Msa0391200 | AT2G47900.1 | 39.410 | 373 | 171 | 12 | 9 | 342 | 42 | 398 | 8.26e-66 | 213 |
| Msa0391200 | AT2G47900.3 | 39.305 | 374 | 171 | 12 | 9 | 342 | 42 | 399 | 9.04e-66 | 213 |
| Msa0391200 | AT1G76900.2 | 37.713 | 411 | 165 | 15 | 11 | 342 | 49 | 447 | 4.64e-62 | 205 |
| Msa0391200 | AT1G76900.1 | 37.713 | 411 | 165 | 15 | 11 | 342 | 49 | 447 | 4.64e-62 | 205 |
| Msa0391200 | AT1G76900.3 | 37.713 | 411 | 165 | 15 | 11 | 342 | 49 | 447 | 4.64e-62 | 205 |
| Msa0391200 | AT5G18680.1 | 39.557 | 316 | 157 | 11 | 41 | 342 | 86 | 381 | 1.07e-57 | 192 |
| Msa0391200 | AT1G43640.1 | 34.896 | 384 | 183 | 13 | 14 | 342 | 50 | 421 | 4.05e-56 | 189 |
| Msa0391200 | AT3G06380.1 | 38.835 | 309 | 160 | 11 | 44 | 342 | 83 | 372 | 1.60e-55 | 186 |
| Msa0391200 | AT1G53320.1 | 40.171 | 351 | 150 | 12 | 22 | 342 | 51 | 371 | 2.66e-55 | 185 |
| Msa0391200 | AT1G43640.2 | 37.576 | 330 | 163 | 11 | 44 | 342 | 38 | 355 | 2.63e-54 | 182 |
| Msa0391200 | AT5G18680.2 | 38.436 | 307 | 155 | 11 | 50 | 342 | 3 | 289 | 2.09e-52 | 175 |
| Msa0391200 | AT3G06380.2 | 38.305 | 295 | 153 | 11 | 58 | 342 | 5 | 280 | 9.36e-51 | 171 |
| Msa0391200 | AT1G25280.3 | 41.509 | 265 | 112 | 9 | 113 | 342 | 3 | 259 | 2.53e-48 | 164 |
| Msa0391200 | AT1G25280.2 | 41.509 | 265 | 112 | 9 | 113 | 342 | 3 | 259 | 2.53e-48 | 164 |
Find 89 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACTTGCTTCACTGAAAT+AGG | 0.203520 | 3_2:-2703924 | None:intergenic |
| ATCCGGCTTGATCGACAATT+TGG | 0.228814 | 3_2:-2704707 | None:intergenic |
| CACTTTACCAGCACATTTGC+TGG | 0.239605 | 3_2:-2704520 | None:intergenic |
| AATGTTGATCGACAATTCTT+TGG | 0.246336 | 3_2:-2704755 | None:intergenic |
| ATGATGCAATGTATTCTTCT+TGG | 0.252868 | 3_2:-2704836 | None:intergenic |
| ATCTTACAGTTTGGAAAGAT+TGG | 0.311656 | 3_2:+2705190 | Msa0391200:CDS |
| GCGGTTAATAACAACTTATC+AGG | 0.340398 | 3_2:-2704438 | None:intergenic |
| CCCTGTTGAATAGGTTCAAC+TGG | 0.343357 | 3_2:-2703795 | None:intergenic |
| GTTCAAACTTGCTGTCCTAT+TGG | 0.349852 | 3_2:-2704460 | None:intergenic |
| ATCCGATGCAGTGCTTTATT+CGG | 0.354028 | 3_2:+2704050 | Msa0391200:CDS |
| GAACTTGTTGAGCCCAAAAC+TGG | 0.355370 | 3_2:-2704642 | None:intergenic |
| TCCAGTTGAACCTATTCAAC+AGG | 0.363499 | 3_2:+2703794 | Msa0391200:CDS |
| CTGTCTCAGCTATTCATAAA+GGG | 0.367799 | 3_2:+2704870 | Msa0391200:CDS |
| ACCCATTGTCCCTGTTGAAT+AGG | 0.369804 | 3_2:-2703804 | None:intergenic |
| ATTACCCTTTCTTGCTCCTC+AGG | 0.370302 | 3_2:-2705169 | None:intergenic |
| GAAAGGGTAATCTTACAGTT+TGG | 0.371540 | 3_2:+2705181 | Msa0391200:CDS |
| ACAATGGGTAAGTCTGCTTT+TGG | 0.377762 | 3_2:+2703818 | Msa0391200:CDS |
| ATATCTTATTATTAAATATC+CGG | 0.379842 | 3_2:-2704724 | None:intergenic |
| CCAAGCCTTTGCCATCTGCT+TGG | 0.383935 | 3_2:+2705258 | Msa0391200:CDS |
| TCAAAAGCAAGGCTCCTAGA+TGG | 0.387776 | 3_2:+2705038 | Msa0391200:CDS |
| GGTTGAACTGCAGCATCATC+TGG | 0.388445 | 3_2:-2704686 | None:intergenic |
| CCTGTCTCAGCTATTCATAA+AGG | 0.399999 | 3_2:+2704869 | Msa0391200:CDS |
| TCAGTCCTGGTAGCTCTGAT+TGG | 0.423592 | 3_2:-2705000 | None:intergenic |
| AGTTGTTATTAACCGCCAAT+AGG | 0.427507 | 3_2:+2704445 | Msa0391200:CDS |
| TCTTCTTGGCGAGTGGACTT+TGG | 0.427811 | 3_2:-2704822 | None:intergenic |
| CATCGGATGATCACGGGGAC+CGG | 0.448035 | 3_2:-2704035 | None:intergenic |
| ACCTATTCAACAGGGACAAT+GGG | 0.455866 | 3_2:+2703803 | Msa0391200:CDS |
| GGGTTGGCACCTAGACTTCA+AGG | 0.460220 | 3_2:+2705075 | Msa0391200:CDS |
| GAGGTAAAGATGTCAATGTC+AGG | 0.460528 | 3_2:-2704901 | None:intergenic |
| GAAAACGTTTCATCAGATAC+TGG | 0.463759 | 3_2:-2704923 | None:intergenic |
| TTCTCCTTCGCCAACACTGA+AGG | 0.471471 | 3_2:+2704943 | Msa0391200:CDS |
| ATAAGTTTAGGGCGCGGAAA+AGG | 0.480468 | 3_2:-2705287 | None:intergenic |
| TTGCACTGCTCATCCCATCT+AGG | 0.486778 | 3_2:-2705052 | None:intergenic |
| TTTCTCCTGAGGAGCAAGAA+AGG | 0.491680 | 3_2:+2705164 | Msa0391200:CDS |
| AAGAATTGTCGATCAACATT+CGG | 0.495521 | 3_2:+2704758 | Msa0391200:CDS |
| TGGCGAGTGGACTTTGGAAA+TGG | 0.496588 | 3_2:-2704816 | None:intergenic |
| TAACACGTCCCTTGAAGTCT+AGG | 0.498472 | 3_2:-2705084 | None:intergenic |
| GCAGATGGCAAAGGCTTGGA+AGG | 0.500254 | 3_2:-2705254 | None:intergenic |
| CCTTTATGAATAGCTGAGAC+AGG | 0.505478 | 3_2:-2704869 | None:intergenic |
| GTGATCCTTTCTCTTTGCTG+AGG | 0.510106 | 3_2:-2703897 | None:intergenic |
| CAAACTTGCTGTCCTATTGG+CGG | 0.512359 | 3_2:-2704457 | None:intergenic |
| CTCCTTCGCCAACACTGAAG+GGG | 0.516445 | 3_2:+2704945 | Msa0391200:CDS |
| CCAAGCAGATGGCAAAGGCT+TGG | 0.517089 | 3_2:-2705258 | None:intergenic |
| GCACTGCATCGGATGATCAC+GGG | 0.519512 | 3_2:-2704041 | None:intergenic |
| CAAAAGCAAGGCTCCTAGAT+GGG | 0.521682 | 3_2:+2705039 | Msa0391200:CDS |
| TCTCCTTCGCCAACACTGAA+GGG | 0.525573 | 3_2:+2704944 | Msa0391200:CDS |
| GTCAAGGGCTCACTCAGTCC+TGG | 0.526580 | 3_2:-2705013 | None:intergenic |
| GGTTCAACTGGAGTTACATC+GGG | 0.530037 | 3_2:-2703783 | None:intergenic |
| GCAAGCCAATCAGAGCTACC+AGG | 0.536157 | 3_2:+2704995 | Msa0391200:CDS |
| ATCGGATGATCACGGGGACC+GGG | 0.536395 | 3_2:-2704034 | None:intergenic |
| TTCCCCTTCAGTGTTGGCGA+AGG | 0.546113 | 3_2:-2704947 | None:intergenic |
| TTGAACCTCAGCAAAGAGAA+AGG | 0.547330 | 3_2:+2703892 | Msa0391200:CDS |
| AACCTATTCAACAGGGACAA+TGG | 0.551901 | 3_2:+2703802 | Msa0391200:CDS |
| GATCGACAATTCTTTGGAGA+CGG | 0.555282 | 3_2:-2704749 | None:intergenic |
| TTCTCCTGAGGAGCAAGAAA+GGG | 0.559662 | 3_2:+2705165 | Msa0391200:CDS |
| AAAGGCAGAAGCCAAGCAGA+TGG | 0.561114 | 3_2:-2705269 | None:intergenic |
| AGAAGCCAAGCAGATGGCAA+AGG | 0.563592 | 3_2:-2705263 | None:intergenic |
| CGATGCAGTGCTTTATTCGG+AGG | 0.578350 | 3_2:+2704053 | Msa0391200:CDS |
| AGGTTCAACTGGAGTTACAT+CGG | 0.583414 | 3_2:-2703784 | None:intergenic |
| AACCAAATTGTCGATCAAGC+CGG | 0.584672 | 3_2:+2704705 | Msa0391200:CDS |
| TCTCAAGCCAGCAAATGTGC+TGG | 0.586754 | 3_2:+2704513 | Msa0391200:CDS |
| TGAGGTTCAACAGCACGCGC+AGG | 0.587298 | 3_2:-2703879 | None:intergenic |
| AAGGCTTGGAAGGCGGAGAG+TGG | 0.587325 | 3_2:-2705244 | None:intergenic |
| CTAACAAGACGGCTACATGT+TGG | 0.589236 | 3_2:-2704791 | None:intergenic |
| AGCACTGCATCGGATGATCA+CGG | 0.590485 | 3_2:-2704042 | None:intergenic |
| TAGATGGGATGAGCAGTGCA+AGG | 0.593291 | 3_2:+2705054 | Msa0391200:CDS |
| CTCCGAATAAAGCACTGCAT+CGG | 0.604271 | 3_2:-2704052 | None:intergenic |
| TTGAAGAGCTCGAGACATCT+CGG | 0.605518 | 3_2:+2703856 | Msa0391200:CDS |
| TGTCTCAGCTATTCATAAAG+GGG | 0.608301 | 3_2:+2704871 | Msa0391200:CDS |
| TAGCTCTGATTGGCTTGCAG+AGG | 0.609870 | 3_2:-2704990 | None:intergenic |
| GCCCTTGACACTCAAAAGCA+AGG | 0.612932 | 3_2:+2705027 | Msa0391200:CDS |
| GGGATGAGCAGTGCAAGGGT+TGG | 0.613229 | 3_2:+2705059 | Msa0391200:CDS |
| TCTCGAGCTCTTCAACCCTA+CGG | 0.616335 | 3_2:-2703848 | None:intergenic |
| GTCTCATAATGTTTCTCCTG+AGG | 0.621196 | 3_2:+2705153 | Msa0391200:CDS |
| CACTGCATCGGATGATCACG+GGG | 0.621816 | 3_2:-2704040 | None:intergenic |
| AATGTATTCTTCTTGGCGAG+TGG | 0.627171 | 3_2:-2704829 | None:intergenic |
| GCAAATGTGCTGGTAAAGTG+AGG | 0.633295 | 3_2:+2704523 | Msa0391200:CDS |
| TGGAAATGGTGCTAACAAGA+CGG | 0.633735 | 3_2:-2704802 | None:intergenic |
| AGATGGGATGAGCAGTGCAA+GGG | 0.635701 | 3_2:+2705055 | Msa0391200:CDS |
| TCAGGAGAAACATTATGAGA+CGG | 0.641318 | 3_2:-2705151 | None:intergenic |
| AGGTAAAGATGTCAATGTCA+GGG | 0.644230 | 3_2:-2704900 | None:intergenic |
| GATGGCAAAGGCTTGGAAGG+CGG | 0.644428 | 3_2:-2705251 | None:intergenic |
| GAGTGGATAAGAGTAGTCCA+TGG | 0.657388 | 3_2:-2705227 | None:intergenic |
| GGTTGGCACCTAGACTTCAA+GGG | 0.657836 | 3_2:+2705076 | Msa0391200:CDS |
| CTTCAAGGGACGTGTTACAG+TGG | 0.670332 | 3_2:+2705090 | Msa0391200:CDS |
| AACGTTTCATCAGATACTGG+AGG | 0.677184 | 3_2:-2704920 | None:intergenic |
| TGGAACAGATATATTCACCA+TGG | 0.684144 | 3_2:+2705210 | Msa0391200:CDS |
| CCAGTTGAACCTATTCAACA+GGG | 0.686684 | 3_2:+2703795 | Msa0391200:CDS |
| TGAACTGCAGCATCATCTGG+AGG | 0.713495 | 3_2:-2704683 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATCTTATTATTAAATATC+CGG | - | chr3_2:2704727-2704746 | None:intergenic | 10.0% |
| !! | ATATCTTATTATTAAATATC+CGG | - | chr3_2:2704727-2704746 | None:intergenic | 10.0% |
| !! | ATAGAACATAAAAAATATGA+GGG | - | chr3_2:2703993-2704012 | None:intergenic | 15.0% |
| !! | AATAGAACATAAAAAATATG+AGG | - | chr3_2:2703994-2704013 | None:intergenic | 15.0% |
| !! | ATAGAACATAAAAAATATGA+GGG | - | chr3_2:2703993-2704012 | None:intergenic | 15.0% |
| !! | AATAGAACATAAAAAATATG+AGG | - | chr3_2:2703994-2704013 | None:intergenic | 15.0% |
| ! | CATAAAAAATATGAGGGAAA+AGG | - | chr3_2:2703987-2704006 | None:intergenic | 25.0% |
| ! | TTAGAAAAAAGATGGAATGT+TGG | - | chr3_2:2704154-2704173 | None:intergenic | 25.0% |
| ! | TCATTGTCTTAGAAAAAAGA+TGG | - | chr3_2:2704162-2704181 | None:intergenic | 25.0% |
| !!! | GTGTTTAAACATCTCTTTTT+TGG | + | chr3_2:2704385-2704404 | Msa0391200:intron | 25.0% |
| ! | GAAAAATCGATAGAATAGAA+GGG | - | chr3_2:2704579-2704598 | None:intergenic | 25.0% |
| ! | TGAAAAATCGATAGAATAGA+AGG | - | chr3_2:2704580-2704599 | None:intergenic | 25.0% |
| !! | TCAAGTTGTGAAGATTATAA+GGG | - | chr3_2:2704609-2704628 | None:intergenic | 25.0% |
| !! | ATCAAGTTGTGAAGATTATA+AGG | - | chr3_2:2704610-2704629 | None:intergenic | 25.0% |
| !! | TCACAACTTGATTTTTATAC+AGG | + | chr3_2:2704618-2704637 | Msa0391200:intron | 25.0% |
| ! | CATAAAAAATATGAGGGAAA+AGG | - | chr3_2:2703987-2704006 | None:intergenic | 25.0% |
| ! | TTAGAAAAAAGATGGAATGT+TGG | - | chr3_2:2704154-2704173 | None:intergenic | 25.0% |
| ! | TCATTGTCTTAGAAAAAAGA+TGG | - | chr3_2:2704162-2704181 | None:intergenic | 25.0% |
| !!! | GTGTTTAAACATCTCTTTTT+TGG | + | chr3_2:2704385-2704404 | Msa0391200:intron | 25.0% |
| ! | GAAAAATCGATAGAATAGAA+GGG | - | chr3_2:2704579-2704598 | None:intergenic | 25.0% |
| ! | TGAAAAATCGATAGAATAGA+AGG | - | chr3_2:2704580-2704599 | None:intergenic | 25.0% |
| !! | TCAAGTTGTGAAGATTATAA+GGG | - | chr3_2:2704609-2704628 | None:intergenic | 25.0% |
| !! | ATCAAGTTGTGAAGATTATA+AGG | - | chr3_2:2704610-2704629 | None:intergenic | 25.0% |
| !! | TCACAACTTGATTTTTATAC+AGG | + | chr3_2:2704618-2704637 | Msa0391200:intron | 25.0% |
| ATTACTTGCTTCACTGAAAT+AGG | - | chr3_2:2703927-2703946 | None:intergenic | 30.0% | |
| TATGAGGGAAAAGGATAAAT+TGG | - | chr3_2:2703978-2703997 | None:intergenic | 30.0% | |
| ! | CAAACTTTTCAGTTGTACTT+AGG | + | chr3_2:2704100-2704119 | Msa0391200:CDS | 30.0% |
| ! | TTTTCAGTTGTACTTAGGTT+AGG | + | chr3_2:2704105-2704124 | Msa0391200:intron | 30.0% |
| TTTCAGTTGTACTTAGGTTA+GGG | + | chr3_2:2704106-2704125 | Msa0391200:intron | 30.0% | |
| !! | ACAAACTTGCTCTAAAGTTA+TGG | + | chr3_2:2704256-2704275 | Msa0391200:intron | 30.0% |
| !! | CAAACTTGCTCTAAAGTTAT+GGG | + | chr3_2:2704257-2704276 | Msa0391200:intron | 30.0% |
| GTTTGCTTGTAATTGTATAG+CGG | + | chr3_2:2704407-2704426 | Msa0391200:intron | 30.0% | |
| CAAGTTGTGAAGATTATAAG+GGG | - | chr3_2:2704608-2704627 | None:intergenic | 30.0% | |
| ! | TTTTTATACAGGTCCAGTTT+TGG | + | chr3_2:2704629-2704648 | Msa0391200:intron | 30.0% |
| ! | TTTTATACAGGTCCAGTTTT+GGG | + | chr3_2:2704630-2704649 | Msa0391200:intron | 30.0% |
| AATGTTGATCGACAATTCTT+TGG | - | chr3_2:2704758-2704777 | None:intergenic | 30.0% | |
| AAGAATTGTCGATCAACATT+CGG | + | chr3_2:2704758-2704777 | Msa0391200:CDS | 30.0% | |
| ATGATGCAATGTATTCTTCT+TGG | - | chr3_2:2704839-2704858 | None:intergenic | 30.0% | |
| ATCTTACAGTTTGGAAAGAT+TGG | + | chr3_2:2705190-2705209 | Msa0391200:CDS | 30.0% | |
| ATTACTTGCTTCACTGAAAT+AGG | - | chr3_2:2703927-2703946 | None:intergenic | 30.0% | |
| TATGAGGGAAAAGGATAAAT+TGG | - | chr3_2:2703978-2703997 | None:intergenic | 30.0% | |
| ! | CAAACTTTTCAGTTGTACTT+AGG | + | chr3_2:2704100-2704119 | Msa0391200:CDS | 30.0% |
| ! | TTTTCAGTTGTACTTAGGTT+AGG | + | chr3_2:2704105-2704124 | Msa0391200:intron | 30.0% |
| TTTCAGTTGTACTTAGGTTA+GGG | + | chr3_2:2704106-2704125 | Msa0391200:intron | 30.0% | |
| !! | ACAAACTTGCTCTAAAGTTA+TGG | + | chr3_2:2704256-2704275 | Msa0391200:intron | 30.0% |
| !! | CAAACTTGCTCTAAAGTTAT+GGG | + | chr3_2:2704257-2704276 | Msa0391200:intron | 30.0% |
| GTTTGCTTGTAATTGTATAG+CGG | + | chr3_2:2704407-2704426 | Msa0391200:intron | 30.0% | |
| CAAGTTGTGAAGATTATAAG+GGG | - | chr3_2:2704608-2704627 | None:intergenic | 30.0% | |
| ! | TTTTTATACAGGTCCAGTTT+TGG | + | chr3_2:2704629-2704648 | Msa0391200:intron | 30.0% |
| ! | TTTTATACAGGTCCAGTTTT+GGG | + | chr3_2:2704630-2704649 | Msa0391200:intron | 30.0% |
| AATGTTGATCGACAATTCTT+TGG | - | chr3_2:2704758-2704777 | None:intergenic | 30.0% | |
| AAGAATTGTCGATCAACATT+CGG | + | chr3_2:2704758-2704777 | Msa0391200:CDS | 30.0% | |
| ATGATGCAATGTATTCTTCT+TGG | - | chr3_2:2704839-2704858 | None:intergenic | 30.0% | |
| ATCTTACAGTTTGGAAAGAT+TGG | + | chr3_2:2705190-2705209 | Msa0391200:CDS | 30.0% | |
| TAAATTATTCGCCCACTTTC+TGG | + | chr3_2:2703946-2703965 | Msa0391200:intron | 35.0% | |
| ! | ATTGGATTAGACCAGAAAGT+GGG | - | chr3_2:2703960-2703979 | None:intergenic | 35.0% |
| ! | AATTGGATTAGACCAGAAAG+TGG | - | chr3_2:2703961-2703980 | None:intergenic | 35.0% |
| TTCAGTTGTACTTAGGTTAG+GGG | + | chr3_2:2704107-2704126 | Msa0391200:intron | 35.0% | |
| GCGGTTAATAACAACTTATC+AGG | - | chr3_2:2704441-2704460 | None:intergenic | 35.0% | |
| ! | AGTTGTTATTAACCGCCAAT+AGG | + | chr3_2:2704445-2704464 | Msa0391200:CDS | 35.0% |
| !! | TAAAGTGAGGCAAGTTTTGA+TGG | + | chr3_2:2704536-2704555 | Msa0391200:intron | 35.0% |
| TTGTGAAGATTATAAGGGGA+TGG | - | chr3_2:2704604-2704623 | None:intergenic | 35.0% | |
| CTGTCTCAGCTATTCATAAA+GGG | + | chr3_2:2704870-2704889 | Msa0391200:CDS | 35.0% | |
| TGTCTCAGCTATTCATAAAG+GGG | + | chr3_2:2704871-2704890 | Msa0391200:CDS | 35.0% | |
| AGGTAAAGATGTCAATGTCA+GGG | - | chr3_2:2704903-2704922 | None:intergenic | 35.0% | |
| GAAAACGTTTCATCAGATAC+TGG | - | chr3_2:2704926-2704945 | None:intergenic | 35.0% | |
| TCAGGAGAAACATTATGAGA+CGG | - | chr3_2:2705154-2705173 | None:intergenic | 35.0% | |
| GAAAGGGTAATCTTACAGTT+TGG | + | chr3_2:2705181-2705200 | Msa0391200:CDS | 35.0% | |
| TGGAACAGATATATTCACCA+TGG | + | chr3_2:2705210-2705229 | Msa0391200:CDS | 35.0% | |
| TAAATTATTCGCCCACTTTC+TGG | + | chr3_2:2703946-2703965 | Msa0391200:intron | 35.0% | |
| ! | ATTGGATTAGACCAGAAAGT+GGG | - | chr3_2:2703960-2703979 | None:intergenic | 35.0% |
| ! | AATTGGATTAGACCAGAAAG+TGG | - | chr3_2:2703961-2703980 | None:intergenic | 35.0% |
| TTCAGTTGTACTTAGGTTAG+GGG | + | chr3_2:2704107-2704126 | Msa0391200:intron | 35.0% | |
| GCGGTTAATAACAACTTATC+AGG | - | chr3_2:2704441-2704460 | None:intergenic | 35.0% | |
| ! | AGTTGTTATTAACCGCCAAT+AGG | + | chr3_2:2704445-2704464 | Msa0391200:CDS | 35.0% |
| !! | TAAAGTGAGGCAAGTTTTGA+TGG | + | chr3_2:2704536-2704555 | Msa0391200:intron | 35.0% |
| TTGTGAAGATTATAAGGGGA+TGG | - | chr3_2:2704604-2704623 | None:intergenic | 35.0% | |
| CTGTCTCAGCTATTCATAAA+GGG | + | chr3_2:2704870-2704889 | Msa0391200:CDS | 35.0% | |
| TGTCTCAGCTATTCATAAAG+GGG | + | chr3_2:2704871-2704890 | Msa0391200:CDS | 35.0% | |
| AGGTAAAGATGTCAATGTCA+GGG | - | chr3_2:2704903-2704922 | None:intergenic | 35.0% | |
| GAAAACGTTTCATCAGATAC+TGG | - | chr3_2:2704926-2704945 | None:intergenic | 35.0% | |
| TCAGGAGAAACATTATGAGA+CGG | - | chr3_2:2705154-2705173 | None:intergenic | 35.0% | |
| GAAAGGGTAATCTTACAGTT+TGG | + | chr3_2:2705181-2705200 | Msa0391200:CDS | 35.0% | |
| TGGAACAGATATATTCACCA+TGG | + | chr3_2:2705210-2705229 | Msa0391200:CDS | 35.0% | |
| AGGTTCAACTGGAGTTACAT+CGG | - | chr3_2:2703787-2703806 | None:intergenic | 40.0% | |
| TCCAGTTGAACCTATTCAAC+AGG | + | chr3_2:2703794-2703813 | Msa0391200:CDS | 40.0% | |
| CCAGTTGAACCTATTCAACA+GGG | + | chr3_2:2703795-2703814 | Msa0391200:CDS | 40.0% | |
| AACCTATTCAACAGGGACAA+TGG | + | chr3_2:2703802-2703821 | Msa0391200:CDS | 40.0% | |
| ACCTATTCAACAGGGACAAT+GGG | + | chr3_2:2703803-2703822 | Msa0391200:CDS | 40.0% | |
| ! | ACAATGGGTAAGTCTGCTTT+TGG | + | chr3_2:2703818-2703837 | Msa0391200:CDS | 40.0% |
| ! | TGCTTTTGGACTTAATCCGT+AGG | + | chr3_2:2703832-2703851 | Msa0391200:CDS | 40.0% |
| ! | GCTTTTGGACTTAATCCGTA+GGG | + | chr3_2:2703833-2703852 | Msa0391200:CDS | 40.0% |
| TTGAACCTCAGCAAAGAGAA+AGG | + | chr3_2:2703892-2703911 | Msa0391200:CDS | 40.0% | |
| CTTCATGTGTATGAATAGCC+CGG | + | chr3_2:2704016-2704035 | Msa0391200:intron | 40.0% | |
| ! | ATCCGATGCAGTGCTTTATT+CGG | + | chr3_2:2704050-2704069 | Msa0391200:CDS | 40.0% |
| TTAGGGGCCATGTAAGTATT+CGG | + | chr3_2:2704123-2704142 | Msa0391200:intron | 40.0% | |
| !! | GTTCAAACTTGCTGTCCTAT+TGG | - | chr3_2:2704463-2704482 | None:intergenic | 40.0% |
| AACCAAATTGTCGATCAAGC+CGG | + | chr3_2:2704705-2704724 | Msa0391200:CDS | 40.0% | |
| ! | GATCGACAATTCTTTGGAGA+CGG | - | chr3_2:2704752-2704771 | None:intergenic | 40.0% |
| ! | TGGAAATGGTGCTAACAAGA+CGG | - | chr3_2:2704805-2704824 | None:intergenic | 40.0% |
| AATGTATTCTTCTTGGCGAG+TGG | - | chr3_2:2704832-2704851 | None:intergenic | 40.0% | |
| CCTTTATGAATAGCTGAGAC+AGG | - | chr3_2:2704872-2704891 | None:intergenic | 40.0% | |
| CCTGTCTCAGCTATTCATAA+AGG | + | chr3_2:2704869-2704888 | Msa0391200:CDS | 40.0% | |
| GAGGTAAAGATGTCAATGTC+AGG | - | chr3_2:2704904-2704923 | None:intergenic | 40.0% | |
| AACGTTTCATCAGATACTGG+AGG | - | chr3_2:2704923-2704942 | None:intergenic | 40.0% | |
| GTCTCATAATGTTTCTCCTG+AGG | + | chr3_2:2705153-2705172 | Msa0391200:CDS | 40.0% | |
| AGGTTCAACTGGAGTTACAT+CGG | - | chr3_2:2703787-2703806 | None:intergenic | 40.0% | |
| TCCAGTTGAACCTATTCAAC+AGG | + | chr3_2:2703794-2703813 | Msa0391200:CDS | 40.0% | |
| CCAGTTGAACCTATTCAACA+GGG | + | chr3_2:2703795-2703814 | Msa0391200:CDS | 40.0% | |
| AACCTATTCAACAGGGACAA+TGG | + | chr3_2:2703802-2703821 | Msa0391200:CDS | 40.0% | |
| ACCTATTCAACAGGGACAAT+GGG | + | chr3_2:2703803-2703822 | Msa0391200:CDS | 40.0% | |
| ! | ACAATGGGTAAGTCTGCTTT+TGG | + | chr3_2:2703818-2703837 | Msa0391200:CDS | 40.0% |
| ! | TGCTTTTGGACTTAATCCGT+AGG | + | chr3_2:2703832-2703851 | Msa0391200:CDS | 40.0% |
| ! | GCTTTTGGACTTAATCCGTA+GGG | + | chr3_2:2703833-2703852 | Msa0391200:CDS | 40.0% |
| TTGAACCTCAGCAAAGAGAA+AGG | + | chr3_2:2703892-2703911 | Msa0391200:CDS | 40.0% | |
| CTTCATGTGTATGAATAGCC+CGG | + | chr3_2:2704016-2704035 | Msa0391200:intron | 40.0% | |
| ! | ATCCGATGCAGTGCTTTATT+CGG | + | chr3_2:2704050-2704069 | Msa0391200:CDS | 40.0% |
| TTAGGGGCCATGTAAGTATT+CGG | + | chr3_2:2704123-2704142 | Msa0391200:intron | 40.0% | |
| !! | GTTCAAACTTGCTGTCCTAT+TGG | - | chr3_2:2704463-2704482 | None:intergenic | 40.0% |
| AACCAAATTGTCGATCAAGC+CGG | + | chr3_2:2704705-2704724 | Msa0391200:CDS | 40.0% | |
| ! | GATCGACAATTCTTTGGAGA+CGG | - | chr3_2:2704752-2704771 | None:intergenic | 40.0% |
| ! | TGGAAATGGTGCTAACAAGA+CGG | - | chr3_2:2704805-2704824 | None:intergenic | 40.0% |
| AATGTATTCTTCTTGGCGAG+TGG | - | chr3_2:2704832-2704851 | None:intergenic | 40.0% | |
| CCTTTATGAATAGCTGAGAC+AGG | - | chr3_2:2704872-2704891 | None:intergenic | 40.0% | |
| CCTGTCTCAGCTATTCATAA+AGG | + | chr3_2:2704869-2704888 | Msa0391200:CDS | 40.0% | |
| GAGGTAAAGATGTCAATGTC+AGG | - | chr3_2:2704904-2704923 | None:intergenic | 40.0% | |
| AACGTTTCATCAGATACTGG+AGG | - | chr3_2:2704923-2704942 | None:intergenic | 40.0% | |
| GTCTCATAATGTTTCTCCTG+AGG | + | chr3_2:2705153-2705172 | Msa0391200:CDS | 40.0% | |
| GGTTCAACTGGAGTTACATC+GGG | - | chr3_2:2703786-2703805 | None:intergenic | 45.0% | |
| CCCTGTTGAATAGGTTCAAC+TGG | - | chr3_2:2703798-2703817 | None:intergenic | 45.0% | |
| ACCCATTGTCCCTGTTGAAT+AGG | - | chr3_2:2703807-2703826 | None:intergenic | 45.0% | |
| TTGAAGAGCTCGAGACATCT+CGG | + | chr3_2:2703856-2703875 | Msa0391200:CDS | 45.0% | |
| GTGATCCTTTCTCTTTGCTG+AGG | - | chr3_2:2703900-2703919 | None:intergenic | 45.0% | |
| CGGGCTATTCATACACATGA+AGG | - | chr3_2:2704018-2704037 | None:intergenic | 45.0% | |
| !! | CTCCGAATAAAGCACTGCAT+CGG | - | chr3_2:2704055-2704074 | None:intergenic | 45.0% |
| GGAGCAACCGAATACTTACA+TGG | - | chr3_2:2704133-2704152 | None:intergenic | 45.0% | |
| !! | CAAACTTGCTGTCCTATTGG+CGG | - | chr3_2:2704460-2704479 | None:intergenic | 45.0% |
| CACTTTACCAGCACATTTGC+TGG | - | chr3_2:2704523-2704542 | None:intergenic | 45.0% | |
| ! | GCAAATGTGCTGGTAAAGTG+AGG | + | chr3_2:2704523-2704542 | Msa0391200:CDS | 45.0% |
| !! | GAACTTGTTGAGCCCAAAAC+TGG | - | chr3_2:2704645-2704664 | None:intergenic | 45.0% |
| ! | ATCCGGCTTGATCGACAATT+TGG | - | chr3_2:2704710-2704729 | None:intergenic | 45.0% |
| CTAACAAGACGGCTACATGT+TGG | - | chr3_2:2704794-2704813 | None:intergenic | 45.0% | |
| ! | TGAGTTTTCCCCTTCAGTGT+TGG | - | chr3_2:2704956-2704975 | None:intergenic | 45.0% |
| !! | GCCTTGCTTTTGAGTGTCAA+GGG | - | chr3_2:2705031-2705050 | None:intergenic | 45.0% |
| !! | AGCCTTGCTTTTGAGTGTCA+AGG | - | chr3_2:2705032-2705051 | None:intergenic | 45.0% |
| TCAAAAGCAAGGCTCCTAGA+TGG | + | chr3_2:2705038-2705057 | Msa0391200:CDS | 45.0% | |
| CAAAAGCAAGGCTCCTAGAT+GGG | + | chr3_2:2705039-2705058 | Msa0391200:CDS | 45.0% | |
| TAACACGTCCCTTGAAGTCT+AGG | - | chr3_2:2705087-2705106 | None:intergenic | 45.0% | |
| TTTCTCCTGAGGAGCAAGAA+AGG | + | chr3_2:2705164-2705183 | Msa0391200:CDS | 45.0% | |
| TTCTCCTGAGGAGCAAGAAA+GGG | + | chr3_2:2705165-2705184 | Msa0391200:CDS | 45.0% | |
| ATTACCCTTTCTTGCTCCTC+AGG | - | chr3_2:2705172-2705191 | None:intergenic | 45.0% | |
| GAGTGGATAAGAGTAGTCCA+TGG | - | chr3_2:2705230-2705249 | None:intergenic | 45.0% | |
| GGTTCAACTGGAGTTACATC+GGG | - | chr3_2:2703786-2703805 | None:intergenic | 45.0% | |
| CCCTGTTGAATAGGTTCAAC+TGG | - | chr3_2:2703798-2703817 | None:intergenic | 45.0% | |
| ACCCATTGTCCCTGTTGAAT+AGG | - | chr3_2:2703807-2703826 | None:intergenic | 45.0% | |
| TTGAAGAGCTCGAGACATCT+CGG | + | chr3_2:2703856-2703875 | Msa0391200:CDS | 45.0% | |
| GTGATCCTTTCTCTTTGCTG+AGG | - | chr3_2:2703900-2703919 | None:intergenic | 45.0% | |
| CGGGCTATTCATACACATGA+AGG | - | chr3_2:2704018-2704037 | None:intergenic | 45.0% | |
| !! | CTCCGAATAAAGCACTGCAT+CGG | - | chr3_2:2704055-2704074 | None:intergenic | 45.0% |
| GGAGCAACCGAATACTTACA+TGG | - | chr3_2:2704133-2704152 | None:intergenic | 45.0% | |
| !! | CAAACTTGCTGTCCTATTGG+CGG | - | chr3_2:2704460-2704479 | None:intergenic | 45.0% |
| CACTTTACCAGCACATTTGC+TGG | - | chr3_2:2704523-2704542 | None:intergenic | 45.0% | |
| ! | GCAAATGTGCTGGTAAAGTG+AGG | + | chr3_2:2704523-2704542 | Msa0391200:CDS | 45.0% |
| !! | GAACTTGTTGAGCCCAAAAC+TGG | - | chr3_2:2704645-2704664 | None:intergenic | 45.0% |
| ! | ATCCGGCTTGATCGACAATT+TGG | - | chr3_2:2704710-2704729 | None:intergenic | 45.0% |
| CTAACAAGACGGCTACATGT+TGG | - | chr3_2:2704794-2704813 | None:intergenic | 45.0% | |
| ! | TGAGTTTTCCCCTTCAGTGT+TGG | - | chr3_2:2704956-2704975 | None:intergenic | 45.0% |
| !! | GCCTTGCTTTTGAGTGTCAA+GGG | - | chr3_2:2705031-2705050 | None:intergenic | 45.0% |
| !! | AGCCTTGCTTTTGAGTGTCA+AGG | - | chr3_2:2705032-2705051 | None:intergenic | 45.0% |
| TCAAAAGCAAGGCTCCTAGA+TGG | + | chr3_2:2705038-2705057 | Msa0391200:CDS | 45.0% | |
| CAAAAGCAAGGCTCCTAGAT+GGG | + | chr3_2:2705039-2705058 | Msa0391200:CDS | 45.0% | |
| TAACACGTCCCTTGAAGTCT+AGG | - | chr3_2:2705087-2705106 | None:intergenic | 45.0% | |
| TTTCTCCTGAGGAGCAAGAA+AGG | + | chr3_2:2705164-2705183 | Msa0391200:CDS | 45.0% | |
| TTCTCCTGAGGAGCAAGAAA+GGG | + | chr3_2:2705165-2705184 | Msa0391200:CDS | 45.0% | |
| ATTACCCTTTCTTGCTCCTC+AGG | - | chr3_2:2705172-2705191 | None:intergenic | 45.0% | |
| GAGTGGATAAGAGTAGTCCA+TGG | - | chr3_2:2705230-2705249 | None:intergenic | 45.0% | |
| TCTCGAGCTCTTCAACCCTA+CGG | - | chr3_2:2703851-2703870 | None:intergenic | 50.0% | |
| AGCACTGCATCGGATGATCA+CGG | - | chr3_2:2704045-2704064 | None:intergenic | 50.0% | |
| ! | CGATGCAGTGCTTTATTCGG+AGG | + | chr3_2:2704053-2704072 | Msa0391200:CDS | 50.0% |
| TCTCAAGCCAGCAAATGTGC+TGG | + | chr3_2:2704513-2704532 | Msa0391200:CDS | 50.0% | |
| TGAACTGCAGCATCATCTGG+AGG | - | chr3_2:2704686-2704705 | None:intergenic | 50.0% | |
| GGTTGAACTGCAGCATCATC+TGG | - | chr3_2:2704689-2704708 | None:intergenic | 50.0% | |
| ! | TGGCGAGTGGACTTTGGAAA+TGG | - | chr3_2:2704819-2704838 | None:intergenic | 50.0% |
| ! | TCTTCTTGGCGAGTGGACTT+TGG | - | chr3_2:2704825-2704844 | None:intergenic | 50.0% |
| TTCTCCTTCGCCAACACTGA+AGG | + | chr3_2:2704943-2704962 | Msa0391200:CDS | 50.0% | |
| TCTCCTTCGCCAACACTGAA+GGG | + | chr3_2:2704944-2704963 | Msa0391200:CDS | 50.0% | |
| !! | TAGCTCTGATTGGCTTGCAG+AGG | - | chr3_2:2704993-2705012 | None:intergenic | 50.0% |
| !! | TCAGTCCTGGTAGCTCTGAT+TGG | - | chr3_2:2705003-2705022 | None:intergenic | 50.0% |
| GCCCTTGACACTCAAAAGCA+AGG | + | chr3_2:2705027-2705046 | Msa0391200:CDS | 50.0% | |
| TTGCACTGCTCATCCCATCT+AGG | - | chr3_2:2705055-2705074 | None:intergenic | 50.0% | |
| TAGATGGGATGAGCAGTGCA+AGG | + | chr3_2:2705054-2705073 | Msa0391200:CDS | 50.0% | |
| AGATGGGATGAGCAGTGCAA+GGG | + | chr3_2:2705055-2705074 | Msa0391200:CDS | 50.0% | |
| GGTTGGCACCTAGACTTCAA+GGG | + | chr3_2:2705076-2705095 | Msa0391200:CDS | 50.0% | |
| CTTCAAGGGACGTGTTACAG+TGG | + | chr3_2:2705090-2705109 | Msa0391200:CDS | 50.0% | |
| AGAAGCCAAGCAGATGGCAA+AGG | - | chr3_2:2705266-2705285 | None:intergenic | 50.0% | |
| AAAGGCAGAAGCCAAGCAGA+TGG | - | chr3_2:2705272-2705291 | None:intergenic | 50.0% | |
| TCTCGAGCTCTTCAACCCTA+CGG | - | chr3_2:2703851-2703870 | None:intergenic | 50.0% | |
| AGCACTGCATCGGATGATCA+CGG | - | chr3_2:2704045-2704064 | None:intergenic | 50.0% | |
| ! | CGATGCAGTGCTTTATTCGG+AGG | + | chr3_2:2704053-2704072 | Msa0391200:CDS | 50.0% |
| TCTCAAGCCAGCAAATGTGC+TGG | + | chr3_2:2704513-2704532 | Msa0391200:CDS | 50.0% | |
| TGAACTGCAGCATCATCTGG+AGG | - | chr3_2:2704686-2704705 | None:intergenic | 50.0% | |
| GGTTGAACTGCAGCATCATC+TGG | - | chr3_2:2704689-2704708 | None:intergenic | 50.0% | |
| ! | TGGCGAGTGGACTTTGGAAA+TGG | - | chr3_2:2704819-2704838 | None:intergenic | 50.0% |
| ! | TCTTCTTGGCGAGTGGACTT+TGG | - | chr3_2:2704825-2704844 | None:intergenic | 50.0% |
| TTCTCCTTCGCCAACACTGA+AGG | + | chr3_2:2704943-2704962 | Msa0391200:CDS | 50.0% | |
| TCTCCTTCGCCAACACTGAA+GGG | + | chr3_2:2704944-2704963 | Msa0391200:CDS | 50.0% | |
| !! | TAGCTCTGATTGGCTTGCAG+AGG | - | chr3_2:2704993-2705012 | None:intergenic | 50.0% |
| !! | TCAGTCCTGGTAGCTCTGAT+TGG | - | chr3_2:2705003-2705022 | None:intergenic | 50.0% |
| GCCCTTGACACTCAAAAGCA+AGG | + | chr3_2:2705027-2705046 | Msa0391200:CDS | 50.0% | |
| TTGCACTGCTCATCCCATCT+AGG | - | chr3_2:2705055-2705074 | None:intergenic | 50.0% | |
| TAGATGGGATGAGCAGTGCA+AGG | + | chr3_2:2705054-2705073 | Msa0391200:CDS | 50.0% | |
| AGATGGGATGAGCAGTGCAA+GGG | + | chr3_2:2705055-2705074 | Msa0391200:CDS | 50.0% | |
| GGTTGGCACCTAGACTTCAA+GGG | + | chr3_2:2705076-2705095 | Msa0391200:CDS | 50.0% | |
| CTTCAAGGGACGTGTTACAG+TGG | + | chr3_2:2705090-2705109 | Msa0391200:CDS | 50.0% | |
| AGAAGCCAAGCAGATGGCAA+AGG | - | chr3_2:2705266-2705285 | None:intergenic | 50.0% | |
| AAAGGCAGAAGCCAAGCAGA+TGG | - | chr3_2:2705272-2705291 | None:intergenic | 50.0% | |
| CACTGCATCGGATGATCACG+GGG | - | chr3_2:2704043-2704062 | None:intergenic | 55.0% | |
| GCACTGCATCGGATGATCAC+GGG | - | chr3_2:2704044-2704063 | None:intergenic | 55.0% | |
| CTCCTTCGCCAACACTGAAG+GGG | + | chr3_2:2704945-2704964 | Msa0391200:CDS | 55.0% | |
| !! | TTCCCCTTCAGTGTTGGCGA+AGG | - | chr3_2:2704950-2704969 | None:intergenic | 55.0% |
| GCAAGCCAATCAGAGCTACC+AGG | + | chr3_2:2704995-2705014 | Msa0391200:CDS | 55.0% | |
| ! | GGGTTGGCACCTAGACTTCA+AGG | + | chr3_2:2705075-2705094 | Msa0391200:CDS | 55.0% |
| GATGGCAAAGGCTTGGAAGG+CGG | - | chr3_2:2705254-2705273 | None:intergenic | 55.0% | |
| GCAGATGGCAAAGGCTTGGA+AGG | - | chr3_2:2705257-2705276 | None:intergenic | 55.0% | |
| CCAAGCAGATGGCAAAGGCT+TGG | - | chr3_2:2705261-2705280 | None:intergenic | 55.0% | |
| CCAAGCCTTTGCCATCTGCT+TGG | + | chr3_2:2705258-2705277 | Msa0391200:CDS | 55.0% | |
| CACTGCATCGGATGATCACG+GGG | - | chr3_2:2704043-2704062 | None:intergenic | 55.0% | |
| GCACTGCATCGGATGATCAC+GGG | - | chr3_2:2704044-2704063 | None:intergenic | 55.0% | |
| CTCCTTCGCCAACACTGAAG+GGG | + | chr3_2:2704945-2704964 | Msa0391200:CDS | 55.0% | |
| !! | TTCCCCTTCAGTGTTGGCGA+AGG | - | chr3_2:2704950-2704969 | None:intergenic | 55.0% |
| GCAAGCCAATCAGAGCTACC+AGG | + | chr3_2:2704995-2705014 | Msa0391200:CDS | 55.0% | |
| ! | GGGTTGGCACCTAGACTTCA+AGG | + | chr3_2:2705075-2705094 | Msa0391200:CDS | 55.0% |
| GATGGCAAAGGCTTGGAAGG+CGG | - | chr3_2:2705254-2705273 | None:intergenic | 55.0% | |
| GCAGATGGCAAAGGCTTGGA+AGG | - | chr3_2:2705257-2705276 | None:intergenic | 55.0% | |
| CCAAGCAGATGGCAAAGGCT+TGG | - | chr3_2:2705261-2705280 | None:intergenic | 55.0% | |
| CCAAGCCTTTGCCATCTGCT+TGG | + | chr3_2:2705258-2705277 | Msa0391200:CDS | 55.0% | |
| TGAGGTTCAACAGCACGCGC+AGG | - | chr3_2:2703882-2703901 | None:intergenic | 60.0% | |
| ATCGGATGATCACGGGGACC+GGG | - | chr3_2:2704037-2704056 | None:intergenic | 60.0% | |
| CATCGGATGATCACGGGGAC+CGG | - | chr3_2:2704038-2704057 | None:intergenic | 60.0% | |
| GTCAAGGGCTCACTCAGTCC+TGG | - | chr3_2:2705016-2705035 | None:intergenic | 60.0% | |
| GGGATGAGCAGTGCAAGGGT+TGG | + | chr3_2:2705059-2705078 | Msa0391200:CDS | 60.0% | |
| AAGGCTTGGAAGGCGGAGAG+TGG | - | chr3_2:2705247-2705266 | None:intergenic | 60.0% | |
| TGAGGTTCAACAGCACGCGC+AGG | - | chr3_2:2703882-2703901 | None:intergenic | 60.0% | |
| ATCGGATGATCACGGGGACC+GGG | - | chr3_2:2704037-2704056 | None:intergenic | 60.0% | |
| CATCGGATGATCACGGGGAC+CGG | - | chr3_2:2704038-2704057 | None:intergenic | 60.0% | |
| GTCAAGGGCTCACTCAGTCC+TGG | - | chr3_2:2705016-2705035 | None:intergenic | 60.0% | |
| GGGATGAGCAGTGCAAGGGT+TGG | + | chr3_2:2705059-2705078 | Msa0391200:CDS | 60.0% | |
| AAGGCTTGGAAGGCGGAGAG+TGG | - | chr3_2:2705247-2705266 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 2703768 | 2705303 | 2703768 | ID=Msa0391200;Name=Msa0391200 |
| chr3_2 | mRNA | 2703768 | 2705303 | 2703768 | ID=Msa0391200-mRNA-1;Parent=Msa0391200;Name=Msa0391200-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0|0|1|1|1|4|0|347 |
| chr3_2 | exon | 2703768 | 2703941 | 2703768 | ID=Msa0391200-mRNA-1:exon:814;Parent=Msa0391200-mRNA-1 |
| chr3_2 | exon | 2704034 | 2704121 | 2704034 | ID=Msa0391200-mRNA-1:exon:815;Parent=Msa0391200-mRNA-1 |
| chr3_2 | exon | 2704427 | 2704544 | 2704427 | ID=Msa0391200-mRNA-1:exon:816;Parent=Msa0391200-mRNA-1 |
| chr3_2 | exon | 2704640 | 2705303 | 2704640 | ID=Msa0391200-mRNA-1:exon:817;Parent=Msa0391200-mRNA-1 |
| chr3_2 | CDS | 2703768 | 2703941 | 2703768 | ID=Msa0391200-mRNA-1:cds;Parent=Msa0391200-mRNA-1 |
| chr3_2 | CDS | 2704034 | 2704121 | 2704034 | ID=Msa0391200-mRNA-1:cds;Parent=Msa0391200-mRNA-1 |
| chr3_2 | CDS | 2704427 | 2704544 | 2704427 | ID=Msa0391200-mRNA-1:cds;Parent=Msa0391200-mRNA-1 |
| chr3_2 | CDS | 2704640 | 2705303 | 2704640 | ID=Msa0391200-mRNA-1:cds;Parent=Msa0391200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
