Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391210 | RHN42115.1 | 88.580 | 324 | 25 | 1 | 1 | 312 | 1 | 324 | 0.0 | 572 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391210 | sp|Q8GVE5|TLP2_ARATH | 39.695 | 393 | 142 | 13 | 1 | 308 | 1 | 383 | 5.86e-66 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391210 | A0A396GTK9 | 88.580 | 324 | 25 | 1 | 1 | 312 | 1 | 324 | 0.0 | 572 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0391210 | TF | TUB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391210 | MtrunA17_Chr8g0373341 | 88.580 | 324 | 25 | 1 | 1 | 312 | 1 | 324 | 0.0 | 572 |
| Msa0391210 | MtrunA17_Chr8g0373001 | 55.157 | 223 | 44 | 5 | 1 | 185 | 1 | 205 | 8.50e-65 | 209 |
| Msa0391210 | MtrunA17_Chr8g0373001 | 60.000 | 125 | 49 | 1 | 184 | 308 | 279 | 402 | 7.51e-41 | 147 |
| Msa0391210 | MtrunA17_Chr8g0373331 | 42.493 | 353 | 150 | 10 | 1 | 308 | 1 | 345 | 2.73e-64 | 206 |
| Msa0391210 | MtrunA17_Chr1g0155301 | 37.587 | 431 | 127 | 13 | 1 | 308 | 1 | 412 | 4.44e-64 | 207 |
| Msa0391210 | MtrunA17_Chr8g0373361 | 52.995 | 217 | 50 | 4 | 1 | 185 | 11 | 207 | 1.79e-60 | 198 |
| Msa0391210 | MtrunA17_Chr8g0373361 | 47.656 | 128 | 58 | 3 | 184 | 308 | 281 | 402 | 3.78e-23 | 98.6 |
| Msa0391210 | MtrunA17_Chr5g0404321 | 47.556 | 225 | 60 | 6 | 1 | 185 | 1 | 207 | 4.09e-52 | 176 |
| Msa0391210 | MtrunA17_Chr5g0404321 | 51.181 | 127 | 59 | 2 | 184 | 308 | 281 | 406 | 2.39e-30 | 118 |
| Msa0391210 | MtrunA17_Chr2g0315641 | 34.897 | 341 | 123 | 7 | 49 | 309 | 41 | 362 | 4.59e-48 | 165 |
| Msa0391210 | MtrunA17_Chr8g0373351 | 37.224 | 317 | 126 | 11 | 32 | 308 | 1 | 284 | 2.14e-42 | 147 |
| Msa0391210 | MtrunA17_Chr2g0315651 | 33.523 | 352 | 134 | 11 | 38 | 308 | 25 | 357 | 1.82e-37 | 137 |
| Msa0391210 | MtrunA17_Chr1g0196071 | 28.750 | 400 | 185 | 13 | 1 | 308 | 1 | 392 | 7.65e-32 | 122 |
| Msa0391210 | MtrunA17_Chr2g0278511 | 35.802 | 243 | 98 | 6 | 1 | 203 | 1 | 225 | 9.51e-32 | 122 |
| Msa0391210 | MtrunA17_Chr2g0278511 | 46.465 | 99 | 46 | 2 | 216 | 308 | 320 | 417 | 1.70e-17 | 82.4 |
| Msa0391210 | MtrunA17_Chr1g0201891 | 34.335 | 233 | 92 | 6 | 1 | 192 | 1 | 213 | 1.51e-28 | 114 |
| Msa0391210 | MtrunA17_Chr1g0201891 | 45.545 | 101 | 42 | 3 | 220 | 308 | 322 | 421 | 6.35e-15 | 74.7 |
| Msa0391210 | MtrunA17_Chr2g0286441 | 38.012 | 171 | 53 | 4 | 50 | 185 | 39 | 191 | 3.35e-27 | 109 |
| Msa0391210 | MtrunA17_Chr2g0286441 | 53.571 | 84 | 36 | 3 | 225 | 308 | 303 | 383 | 8.66e-18 | 83.2 |
| Msa0391210 | MtrunA17_Chr1g0156151 | 35.950 | 242 | 92 | 7 | 1 | 200 | 1 | 221 | 4.61e-26 | 103 |
| Msa0391210 | MtrunA17_Chr3g0091401 | 52.459 | 61 | 24 | 2 | 85 | 143 | 31 | 88 | 1.18e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0391210 | AT2G18280.2 | 39.695 | 393 | 142 | 13 | 1 | 308 | 1 | 383 | 5.96e-67 | 215 |
| Msa0391210 | AT2G18280.1 | 39.695 | 393 | 142 | 13 | 1 | 308 | 1 | 383 | 5.96e-67 | 215 |
| Msa0391210 | AT1G47270.3 | 36.158 | 354 | 112 | 10 | 50 | 308 | 44 | 378 | 5.05e-53 | 178 |
| Msa0391210 | AT1G47270.2 | 36.158 | 354 | 112 | 10 | 50 | 308 | 68 | 402 | 8.70e-53 | 178 |
| Msa0391210 | AT1G47270.1 | 36.158 | 354 | 112 | 10 | 50 | 308 | 69 | 403 | 8.90e-53 | 178 |
| Msa0391210 | AT1G53320.1 | 35.549 | 346 | 118 | 8 | 50 | 309 | 44 | 370 | 7.75e-50 | 170 |
| Msa0391210 | AT5G18680.1 | 32.749 | 342 | 146 | 12 | 50 | 308 | 39 | 379 | 1.27e-35 | 132 |
| Msa0391210 | AT5G18680.2 | 34.859 | 284 | 132 | 10 | 77 | 308 | 5 | 287 | 2.26e-31 | 119 |
| Msa0391210 | AT2G47900.2 | 34.685 | 222 | 89 | 5 | 1 | 184 | 1 | 204 | 7.13e-31 | 120 |
| Msa0391210 | AT2G47900.2 | 52.381 | 84 | 37 | 2 | 225 | 308 | 316 | 396 | 1.81e-17 | 82.8 |
| Msa0391210 | AT2G47900.1 | 34.685 | 222 | 89 | 5 | 1 | 184 | 1 | 204 | 7.13e-31 | 120 |
| Msa0391210 | AT2G47900.1 | 52.381 | 84 | 37 | 2 | 225 | 308 | 316 | 396 | 1.81e-17 | 82.8 |
| Msa0391210 | AT2G47900.3 | 34.081 | 223 | 90 | 5 | 1 | 184 | 1 | 205 | 2.52e-30 | 119 |
| Msa0391210 | AT2G47900.3 | 52.381 | 84 | 37 | 2 | 225 | 308 | 317 | 397 | 1.77e-17 | 82.8 |
| Msa0391210 | AT1G76900.2 | 36.893 | 206 | 71 | 6 | 15 | 184 | 27 | 209 | 6.15e-28 | 112 |
| Msa0391210 | AT1G76900.2 | 44.000 | 100 | 39 | 3 | 225 | 308 | 347 | 445 | 9.33e-15 | 74.7 |
| Msa0391210 | AT1G76900.1 | 36.893 | 206 | 71 | 6 | 15 | 184 | 27 | 209 | 6.15e-28 | 112 |
| Msa0391210 | AT1G76900.1 | 44.000 | 100 | 39 | 3 | 225 | 308 | 347 | 445 | 9.33e-15 | 74.7 |
| Msa0391210 | AT1G76900.3 | 36.893 | 206 | 71 | 6 | 15 | 184 | 27 | 209 | 6.15e-28 | 112 |
| Msa0391210 | AT1G76900.3 | 44.000 | 100 | 39 | 3 | 225 | 308 | 347 | 445 | 9.33e-15 | 74.7 |
| Msa0391210 | AT1G25280.1 | 38.278 | 209 | 70 | 6 | 50 | 222 | 59 | 244 | 3.65e-26 | 107 |
| Msa0391210 | AT1G25280.1 | 44.545 | 110 | 49 | 2 | 210 | 308 | 327 | 435 | 1.76e-16 | 80.1 |
| Msa0391210 | AT1G43640.1 | 32.877 | 219 | 85 | 7 | 13 | 195 | 26 | 218 | 2.56e-24 | 102 |
| Msa0391210 | AT3G06380.1 | 32.275 | 189 | 71 | 6 | 29 | 181 | 15 | 182 | 1.44e-19 | 88.6 |
| Msa0391210 | AT3G06380.1 | 55.294 | 85 | 32 | 3 | 225 | 308 | 291 | 370 | 1.40e-18 | 85.9 |
| Msa0391210 | AT1G43640.2 | 33.529 | 170 | 59 | 4 | 62 | 195 | 1 | 152 | 6.13e-19 | 86.7 |
| Msa0391210 | AT3G06380.2 | 54.762 | 84 | 34 | 2 | 225 | 308 | 199 | 278 | 6.30e-19 | 85.5 |
| Msa0391210 | AT3G06380.2 | 39.216 | 102 | 39 | 3 | 85 | 181 | 7 | 90 | 1.55e-14 | 73.2 |
| Msa0391210 | AT1G25280.3 | 44.545 | 110 | 49 | 2 | 210 | 308 | 149 | 257 | 3.57e-17 | 80.1 |
| Msa0391210 | AT1G25280.2 | 44.545 | 110 | 49 | 2 | 210 | 308 | 149 | 257 | 3.57e-17 | 80.1 |
Find 67 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTACATTTCTGTTGTATT+TGG | 0.211959 | 3_2:+2708588 | Msa0391210:CDS |
| ATCCGATACATTGCTTTATA+AGG | 0.216396 | 3_2:+2708551 | Msa0391210:CDS |
| CCCTTAGGAAGAGGTTTAAT+TGG | 0.219248 | 3_2:-2708220 | None:intergenic |
| TGGTTGGTGCCCCGACTTCA+TGG | 0.253666 | 3_2:+2709310 | Msa0391210:CDS |
| TTTCTCCTGGAGTGCGAAAA+TGG | 0.301102 | 3_2:+2709399 | Msa0391210:CDS |
| TCTACCACGTGAATTGCTTT+TGG | 0.303093 | 3_2:+2708255 | Msa0391210:CDS |
| GTTGGACCTTCTTATCCTTT+TGG | 0.333127 | 3_2:-2708916 | None:intergenic |
| AATGAGCCTCTGCTCAATTC+TGG | 0.343539 | 3_2:-2709236 | None:intergenic |
| ATGAGAGATTCATACTTTGC+AGG | 0.355432 | 3_2:+2709200 | Msa0391210:CDS |
| TGGTAAACTGAGGCAAGTTT+TGG | 0.367955 | 3_2:+2708992 | Msa0391210:CDS |
| AAATGGCCAATCTTGCAATT+AGG | 0.381085 | 3_2:+2709416 | Msa0391210:CDS |
| GCGCTTCCTAATTGCAAGAT+TGG | 0.386393 | 3_2:-2709422 | None:intergenic |
| TCAATTCTGGTAGCTTTGAT+AGG | 0.392242 | 3_2:-2709223 | None:intergenic |
| CAGGATGAAATGTCGATAGA+AGG | 0.393558 | 3_2:-2709035 | None:intergenic |
| ACCTCTTCCTAAGGGAGAAT+GGG | 0.402298 | 3_2:+2708228 | Msa0391210:CDS |
| AACCTCTTCCTAAGGGAGAA+TGG | 0.415926 | 3_2:+2708227 | Msa0391210:CDS |
| TCCAATTAAACCTCTTCCTA+AGG | 0.420786 | 3_2:+2708219 | Msa0391210:CDS |
| AGACTTTCCCATTCTCCCTT+AGG | 0.438642 | 3_2:-2708235 | None:intergenic |
| TGTTGTTGTCGTTTGTGCTT+CGG | 0.448353 | 3_2:+2708327 | Msa0391210:CDS |
| TTAACACGGCCCATGAAGTC+GGG | 0.459632 | 3_2:-2709320 | None:intergenic |
| TTCTTCTTCACCAGCACTGA+AGG | 0.461098 | 3_2:+2709166 | Msa0391210:CDS |
| TCTCACTCTCTTCAACCTTA+CGG | 0.479526 | 3_2:-2708285 | None:intergenic |
| ACGACAACAACAGCACGCGC+AGG | 0.482373 | 3_2:-2708316 | None:intergenic |
| AGAGCAAGTGTTTGCTCCAT+CGG | 0.483405 | 3_2:+2708167 | Msa0391210:CDS |
| TTGAAGAGAGTGAGACATCT+TGG | 0.483464 | 3_2:+2708293 | Msa0391210:CDS |
| CGATCTCATAATGTTTCTCC+TGG | 0.484646 | 3_2:+2709386 | Msa0391210:CDS |
| GGTTGGTGCCCCGACTTCAT+GGG | 0.487956 | 3_2:+2709311 | Msa0391210:CDS |
| CTTCATGGGCCGTGTTAAAG+TGG | 0.489206 | 3_2:+2709325 | Msa0391210:CDS |
| TCCCATTCTCCCTTAGGAAG+AGG | 0.491742 | 3_2:-2708229 | None:intergenic |
| TGGAGCAAACACTTGCTCTC+AGG | 0.491819 | 3_2:-2708163 | None:intergenic |
| GTCCAACTTCGTCATATCCT+TGG | 0.498998 | 3_2:+2708932 | Msa0391210:CDS |
| GCATAGTTCAAGAACCCAAC+GGG | 0.501380 | 3_2:+2708113 | Msa0391210:CDS |
| AGTTGTTATTAGCTGCCAAA+AGG | 0.503930 | 3_2:+2708901 | Msa0391210:CDS |
| TAGCTGCCAAAAGGATAAGA+AGG | 0.510373 | 3_2:+2708910 | Msa0391210:CDS |
| TCAAGCAGATGGCAAAGGCT+TGG | 0.510477 | 3_2:-2709496 | None:intergenic |
| GCAGATGGCAAAGGCTTGGA+AGG | 0.525320 | 3_2:-2709492 | None:intergenic |
| AAGGCTTGGAAGGCAGAGAA+TGG | 0.529766 | 3_2:-2709482 | None:intergenic |
| CGAGCAAGCAACAAATATGT+TGG | 0.532337 | 3_2:+2708972 | Msa0391210:CDS |
| TTGCAATTAGGAAGCGCGGA+TGG | 0.532396 | 3_2:+2709428 | Msa0391210:CDS |
| TTTAACACGGCCCATGAAGT+CGG | 0.535987 | 3_2:-2709321 | None:intergenic |
| TGCAATTAGGAAGCGCGGAT+GGG | 0.540465 | 3_2:+2709429 | Msa0391210:CDS |
| GATAGTGTCGCATCTTGCTA+TGG | 0.548725 | 3_2:+2708189 | Msa0391210:CDS |
| CTCCTTATAAAGCAATGTAT+CGG | 0.559402 | 3_2:-2708553 | None:intergenic |
| CCAATTAAACCTCTTCCTAA+GGG | 0.565122 | 3_2:+2708220 | Msa0391210:CDS |
| TCTTCTTCACCAGCACTGAA+GGG | 0.574228 | 3_2:+2709167 | Msa0391210:CDS |
| CTTCTATCGACATTTCATCC+TGG | 0.576137 | 3_2:+2709036 | Msa0391210:CDS |
| CGATACATTGCTTTATAAGG+AGG | 0.577718 | 3_2:+2708554 | Msa0391210:CDS |
| TATGCAACAAATCAAGCAGA+TGG | 0.578623 | 3_2:-2709507 | None:intergenic |
| AGCCAAGGATATGACGAAGT+TGG | 0.583398 | 3_2:-2708934 | None:intergenic |
| AGGATGAAATGTCGATAGAA+GGG | 0.584380 | 3_2:-2709034 | None:intergenic |
| ATCGATCAACAACAGCTACA+AGG | 0.593016 | 3_2:-2709367 | None:intergenic |
| GAAAGAGTTTCATCAAACAC+TGG | 0.593740 | 3_2:-2709146 | None:intergenic |
| ATCGGATAATCATGAGGACC+AGG | 0.594387 | 3_2:-2708535 | None:intergenic |
| ACAAATATGTTGGTAAACTG+AGG | 0.614123 | 3_2:+2708982 | Msa0391210:CDS |
| ACAAATCAAGCAGATGGCAA+AGG | 0.618453 | 3_2:-2709501 | None:intergenic |
| AGATGGGATGAGCAGCGCAA+TGG | 0.619988 | 3_2:+2709290 | Msa0391210:CDS |
| AGTGTCGTATATAGTGAACT+TGG | 0.625989 | 3_2:-2709117 | None:intergenic |
| AGAGTTTCATCAAACACTGG+AGG | 0.644449 | 3_2:-2709143 | None:intergenic |
| AGCATAGTTCAAGAACCCAA+CGG | 0.644993 | 3_2:+2708112 | Msa0391210:CDS |
| TCATAGATTCCACTTTAACA+CGG | 0.648935 | 3_2:-2709334 | None:intergenic |
| CAAGATGCGACACTATCCGA+TGG | 0.648960 | 3_2:-2708183 | None:intergenic |
| GGGATGAGCAGCGCAATGGT+TGG | 0.651798 | 3_2:+2709294 | Msa0391210:CDS |
| AATCTTGCAATTAGGAAGCG+CGG | 0.662669 | 3_2:+2709424 | Msa0391210:CDS |
| CAATGTATCGGATAATCATG+AGG | 0.672393 | 3_2:-2708541 | None:intergenic |
| TAACACGGCCCATGAAGTCG+GGG | 0.673932 | 3_2:-2709319 | None:intergenic |
| AAGCTACCAGAATTGAGCAG+AGG | 0.699056 | 3_2:+2709230 | Msa0391210:CDS |
| ATGTCCAAAAGCAATTCACG+TGG | 0.740624 | 3_2:-2708259 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTTGAATTAGATCAGAAAGT+GGG | - | chr3_2:2708461-2708480 | None:intergenic | 25.0% |
| ! | ATTTGAATTAGATCAGAAAG+TGG | - | chr3_2:2708462-2708481 | None:intergenic | 25.0% |
| ! | TTCTACATTTCTGTTGTATT+TGG | + | chr3_2:2708588-2708607 | Msa0391210:CDS | 25.0% |
| !! | CAACTTGATTTTTATACGTA+TGG | + | chr3_2:2709074-2709093 | Msa0391210:intron | 25.0% |
| ! | GACCTTTATACTAAAAAACA+AGG | + | chr3_2:2709262-2709281 | Msa0391210:CDS | 25.0% |
| !!! | AGCCTTGTTTTTTAGTATAA+AGG | - | chr3_2:2709267-2709286 | None:intergenic | 25.0% |
| ! | TTTGAATTAGATCAGAAAGT+GGG | - | chr3_2:2708461-2708480 | None:intergenic | 25.0% |
| ! | ATTTGAATTAGATCAGAAAG+TGG | - | chr3_2:2708462-2708481 | None:intergenic | 25.0% |
| ! | TTCTACATTTCTGTTGTATT+TGG | + | chr3_2:2708588-2708607 | Msa0391210:CDS | 25.0% |
| !! | CAACTTGATTTTTATACGTA+TGG | + | chr3_2:2709074-2709093 | Msa0391210:intron | 25.0% |
| ! | GACCTTTATACTAAAAAACA+AGG | + | chr3_2:2709262-2709281 | Msa0391210:CDS | 25.0% |
| !!! | AGCCTTGTTTTTTAGTATAA+AGG | - | chr3_2:2709267-2709286 | None:intergenic | 25.0% |
| !! | ATTCCATTTTTAATCCCGTT+GGG | - | chr3_2:2708130-2708149 | None:intergenic | 30.0% |
| !! | TATTCCATTTTTAATCCCGT+TGG | - | chr3_2:2708131-2708150 | None:intergenic | 30.0% |
| TAAAAATGGAATATCGAAGC+AGG | + | chr3_2:2708138-2708157 | Msa0391210:CDS | 30.0% | |
| AAAAATGGAATATCGAAGCA+GGG | + | chr3_2:2708139-2708158 | Msa0391210:CDS | 30.0% | |
| ATTTCCTATTTCATTGATGC+AGG | + | chr3_2:2708417-2708436 | Msa0391210:intron | 30.0% | |
| AGAGAACATAAAAAACTCGA+GGG | - | chr3_2:2708494-2708513 | None:intergenic | 30.0% | |
| AAGAGAACATAAAAAACTCG+AGG | - | chr3_2:2708495-2708514 | None:intergenic | 30.0% | |
| ATCCGATACATTGCTTTATA+AGG | + | chr3_2:2708551-2708570 | Msa0391210:CDS | 30.0% | |
| CTCCTTATAAAGCAATGTAT+CGG | - | chr3_2:2708556-2708575 | None:intergenic | 30.0% | |
| !!! | TTCCTTACCTTTTTCAAAGA+CGG | + | chr3_2:2708641-2708660 | Msa0391210:intron | 30.0% |
| ! | ATATTCACCGTCTTTGAAAA+AGG | - | chr3_2:2708651-2708670 | None:intergenic | 30.0% |
| ACTTACTTGCTCTACATTTA+TGG | + | chr3_2:2708741-2708760 | Msa0391210:intron | 30.0% | |
| ATTTATTGTCATTCCGATTG+TGG | + | chr3_2:2708774-2708793 | Msa0391210:intron | 30.0% | |
| CAATGACAATAAACCACAAT+CGG | - | chr3_2:2708790-2708809 | None:intergenic | 30.0% | |
| AACAAGTTGCTTAAATACGT+AGG | - | chr3_2:2708840-2708859 | None:intergenic | 30.0% | |
| !! | CGTATTTAAGCAACTTGTTT+TGG | + | chr3_2:2708841-2708860 | Msa0391210:intron | 30.0% |
| !!! | TTAAGCAACTTGTTTTGGTT+TGG | + | chr3_2:2708846-2708865 | Msa0391210:intron | 30.0% |
| GTTTGGTTGTAATTGTATAG+CGG | + | chr3_2:2708863-2708882 | Msa0391210:intron | 30.0% | |
| ! | ACAAATATGTTGGTAAACTG+AGG | + | chr3_2:2708982-2709001 | Msa0391210:CDS | 30.0% |
| ! | ATCAAGTTGTGAAGACTATA+AGG | - | chr3_2:2709063-2709082 | None:intergenic | 30.0% |
| ! | TTGATTTTTATACGTATGGC+AGG | + | chr3_2:2709078-2709097 | Msa0391210:intron | 30.0% |
| TAAAAAACAAGGCTCTTAGA+TGG | + | chr3_2:2709273-2709292 | Msa0391210:CDS | 30.0% | |
| AAAAAACAAGGCTCTTAGAT+GGG | + | chr3_2:2709274-2709293 | Msa0391210:CDS | 30.0% | |
| TCATAGATTCCACTTTAACA+CGG | - | chr3_2:2709337-2709356 | None:intergenic | 30.0% | |
| !! | ATTCCATTTTTAATCCCGTT+GGG | - | chr3_2:2708130-2708149 | None:intergenic | 30.0% |
| !! | TATTCCATTTTTAATCCCGT+TGG | - | chr3_2:2708131-2708150 | None:intergenic | 30.0% |
| TAAAAATGGAATATCGAAGC+AGG | + | chr3_2:2708138-2708157 | Msa0391210:CDS | 30.0% | |
| AAAAATGGAATATCGAAGCA+GGG | + | chr3_2:2708139-2708158 | Msa0391210:CDS | 30.0% | |
| ATTTCCTATTTCATTGATGC+AGG | + | chr3_2:2708417-2708436 | Msa0391210:intron | 30.0% | |
| AGAGAACATAAAAAACTCGA+GGG | - | chr3_2:2708494-2708513 | None:intergenic | 30.0% | |
| AAGAGAACATAAAAAACTCG+AGG | - | chr3_2:2708495-2708514 | None:intergenic | 30.0% | |
| ATCCGATACATTGCTTTATA+AGG | + | chr3_2:2708551-2708570 | Msa0391210:CDS | 30.0% | |
| CTCCTTATAAAGCAATGTAT+CGG | - | chr3_2:2708556-2708575 | None:intergenic | 30.0% | |
| !!! | TTCCTTACCTTTTTCAAAGA+CGG | + | chr3_2:2708641-2708660 | Msa0391210:intron | 30.0% |
| ! | ATATTCACCGTCTTTGAAAA+AGG | - | chr3_2:2708651-2708670 | None:intergenic | 30.0% |
| ACTTACTTGCTCTACATTTA+TGG | + | chr3_2:2708741-2708760 | Msa0391210:intron | 30.0% | |
| ATTTATTGTCATTCCGATTG+TGG | + | chr3_2:2708774-2708793 | Msa0391210:intron | 30.0% | |
| CAATGACAATAAACCACAAT+CGG | - | chr3_2:2708790-2708809 | None:intergenic | 30.0% | |
| AACAAGTTGCTTAAATACGT+AGG | - | chr3_2:2708840-2708859 | None:intergenic | 30.0% | |
| !! | CGTATTTAAGCAACTTGTTT+TGG | + | chr3_2:2708841-2708860 | Msa0391210:intron | 30.0% |
| !!! | TTAAGCAACTTGTTTTGGTT+TGG | + | chr3_2:2708846-2708865 | Msa0391210:intron | 30.0% |
| GTTTGGTTGTAATTGTATAG+CGG | + | chr3_2:2708863-2708882 | Msa0391210:intron | 30.0% | |
| ! | ACAAATATGTTGGTAAACTG+AGG | + | chr3_2:2708982-2709001 | Msa0391210:CDS | 30.0% |
| ! | ATCAAGTTGTGAAGACTATA+AGG | - | chr3_2:2709063-2709082 | None:intergenic | 30.0% |
| ! | TTGATTTTTATACGTATGGC+AGG | + | chr3_2:2709078-2709097 | Msa0391210:intron | 30.0% |
| TAAAAAACAAGGCTCTTAGA+TGG | + | chr3_2:2709273-2709292 | Msa0391210:CDS | 30.0% | |
| AAAAAACAAGGCTCTTAGAT+GGG | + | chr3_2:2709274-2709293 | Msa0391210:CDS | 30.0% | |
| TCATAGATTCCACTTTAACA+CGG | - | chr3_2:2709337-2709356 | None:intergenic | 30.0% | |
| TCCAATTAAACCTCTTCCTA+AGG | + | chr3_2:2708219-2708238 | Msa0391210:CDS | 35.0% | |
| CCAATTAAACCTCTTCCTAA+GGG | + | chr3_2:2708220-2708239 | Msa0391210:CDS | 35.0% | |
| ! | TTTGACGATCTCTTTTGTGA+CGG | - | chr3_2:2708371-2708390 | None:intergenic | 35.0% |
| ATTGCCTGCATCAATGAAAT+AGG | - | chr3_2:2708424-2708443 | None:intergenic | 35.0% | |
| CAATGTATCGGATAATCATG+AGG | - | chr3_2:2708544-2708563 | None:intergenic | 35.0% | |
| CGATACATTGCTTTATAAGG+AGG | + | chr3_2:2708554-2708573 | Msa0391210:CDS | 35.0% | |
| ! | AGTTGTTATTAGCTGCCAAA+AGG | + | chr3_2:2708901-2708920 | Msa0391210:CDS | 35.0% |
| AGGATGAAATGTCGATAGAA+GGG | - | chr3_2:2709037-2709056 | None:intergenic | 35.0% | |
| AGTGTCGTATATAGTGAACT+TGG | - | chr3_2:2709120-2709139 | None:intergenic | 35.0% | |
| GAAAGAGTTTCATCAAACAC+TGG | - | chr3_2:2709149-2709168 | None:intergenic | 35.0% | |
| ATGAGAGATTCATACTTTGC+AGG | + | chr3_2:2709200-2709219 | Msa0391210:CDS | 35.0% | |
| !! | TCAATTCTGGTAGCTTTGAT+AGG | - | chr3_2:2709226-2709245 | None:intergenic | 35.0% |
| AAATGGCCAATCTTGCAATT+AGG | + | chr3_2:2709416-2709435 | Msa0391210:CDS | 35.0% | |
| TATGCAACAAATCAAGCAGA+TGG | - | chr3_2:2709510-2709529 | None:intergenic | 35.0% | |
| TCCAATTAAACCTCTTCCTA+AGG | + | chr3_2:2708219-2708238 | Msa0391210:CDS | 35.0% | |
| CCAATTAAACCTCTTCCTAA+GGG | + | chr3_2:2708220-2708239 | Msa0391210:CDS | 35.0% | |
| ! | TTTGACGATCTCTTTTGTGA+CGG | - | chr3_2:2708371-2708390 | None:intergenic | 35.0% |
| ATTGCCTGCATCAATGAAAT+AGG | - | chr3_2:2708424-2708443 | None:intergenic | 35.0% | |
| CAATGTATCGGATAATCATG+AGG | - | chr3_2:2708544-2708563 | None:intergenic | 35.0% | |
| CGATACATTGCTTTATAAGG+AGG | + | chr3_2:2708554-2708573 | Msa0391210:CDS | 35.0% | |
| ! | AGTTGTTATTAGCTGCCAAA+AGG | + | chr3_2:2708901-2708920 | Msa0391210:CDS | 35.0% |
| AGGATGAAATGTCGATAGAA+GGG | - | chr3_2:2709037-2709056 | None:intergenic | 35.0% | |
| AGTGTCGTATATAGTGAACT+TGG | - | chr3_2:2709120-2709139 | None:intergenic | 35.0% | |
| GAAAGAGTTTCATCAAACAC+TGG | - | chr3_2:2709149-2709168 | None:intergenic | 35.0% | |
| ATGAGAGATTCATACTTTGC+AGG | + | chr3_2:2709200-2709219 | Msa0391210:CDS | 35.0% | |
| !! | TCAATTCTGGTAGCTTTGAT+AGG | - | chr3_2:2709226-2709245 | None:intergenic | 35.0% |
| AAATGGCCAATCTTGCAATT+AGG | + | chr3_2:2709416-2709435 | Msa0391210:CDS | 35.0% | |
| TATGCAACAAATCAAGCAGA+TGG | - | chr3_2:2709510-2709529 | None:intergenic | 35.0% | |
| AGCATAGTTCAAGAACCCAA+CGG | + | chr3_2:2708112-2708131 | Msa0391210:CDS | 40.0% | |
| GAACCCAACGGGATTAAAAA+TGG | + | chr3_2:2708124-2708143 | Msa0391210:CDS | 40.0% | |
| CCCTTAGGAAGAGGTTTAAT+TGG | - | chr3_2:2708223-2708242 | None:intergenic | 40.0% | |
| ! | TCTACCACGTGAATTGCTTT+TGG | + | chr3_2:2708255-2708274 | Msa0391210:CDS | 40.0% |
| ATGTCCAAAAGCAATTCACG+TGG | - | chr3_2:2708262-2708281 | None:intergenic | 40.0% | |
| ! | GCTTTTGGACATAATCCGTA+AGG | + | chr3_2:2708270-2708289 | Msa0391210:CDS | 40.0% |
| TCTCACTCTCTTCAACCTTA+CGG | - | chr3_2:2708288-2708307 | None:intergenic | 40.0% | |
| TTGAAGAGAGTGAGACATCT+TGG | + | chr3_2:2708293-2708312 | Msa0391210:CDS | 40.0% | |
| ! | TGTTGTTGTCGTTTGTGCTT+CGG | + | chr3_2:2708327-2708346 | Msa0391210:CDS | 40.0% |
| GTGCTTCGGTATGTAAATCA+TGG | + | chr3_2:2708341-2708360 | Msa0391210:intron | 40.0% | |
| CTTCGGTATGTAAATCATGG+AGG | + | chr3_2:2708344-2708363 | Msa0391210:intron | 40.0% | |
| GTCAAAACTCTTCAGCAATG+TGG | + | chr3_2:2708385-2708404 | Msa0391210:intron | 40.0% | |
| AAACTCTTCAGCAATGTGGA+AGG | + | chr3_2:2708389-2708408 | Msa0391210:intron | 40.0% | |
| ! | CACCGTCTTTGAAAAAGGTA+AGG | - | chr3_2:2708646-2708665 | None:intergenic | 40.0% |
| TAGCTGCCAAAAGGATAAGA+AGG | + | chr3_2:2708910-2708929 | Msa0391210:CDS | 40.0% | |
| ! | GTTGGACCTTCTTATCCTTT+TGG | - | chr3_2:2708919-2708938 | None:intergenic | 40.0% |
| AGAAAAATCATCTGCAGCCA+AGG | - | chr3_2:2708952-2708971 | None:intergenic | 40.0% | |
| CGAGCAAGCAACAAATATGT+TGG | + | chr3_2:2708972-2708991 | Msa0391210:CDS | 40.0% | |
| ! | TGGTAAACTGAGGCAAGTTT+TGG | + | chr3_2:2708992-2709011 | Msa0391210:CDS | 40.0% |
| CAGGATGAAATGTCGATAGA+AGG | - | chr3_2:2709038-2709057 | None:intergenic | 40.0% | |
| CTTCTATCGACATTTCATCC+TGG | + | chr3_2:2709036-2709055 | Msa0391210:CDS | 40.0% | |
| TTGTGAAGACTATAAGGACC+AGG | - | chr3_2:2709057-2709076 | None:intergenic | 40.0% | |
| ! | CGTATGGCAGGTCAAATTTT+TGG | + | chr3_2:2709090-2709109 | Msa0391210:intron | 40.0% |
| AGAGTTTCATCAAACACTGG+AGG | - | chr3_2:2709146-2709165 | None:intergenic | 40.0% | |
| ATCGATCAACAACAGCTACA+AGG | - | chr3_2:2709370-2709389 | None:intergenic | 40.0% | |
| CGATCTCATAATGTTTCTCC+TGG | + | chr3_2:2709386-2709405 | Msa0391210:CDS | 40.0% | |
| AATCTTGCAATTAGGAAGCG+CGG | + | chr3_2:2709424-2709443 | Msa0391210:CDS | 40.0% | |
| ACAAATCAAGCAGATGGCAA+AGG | - | chr3_2:2709504-2709523 | None:intergenic | 40.0% | |
| AGCATAGTTCAAGAACCCAA+CGG | + | chr3_2:2708112-2708131 | Msa0391210:CDS | 40.0% | |
| GAACCCAACGGGATTAAAAA+TGG | + | chr3_2:2708124-2708143 | Msa0391210:CDS | 40.0% | |
| CCCTTAGGAAGAGGTTTAAT+TGG | - | chr3_2:2708223-2708242 | None:intergenic | 40.0% | |
| ! | TCTACCACGTGAATTGCTTT+TGG | + | chr3_2:2708255-2708274 | Msa0391210:CDS | 40.0% |
| ATGTCCAAAAGCAATTCACG+TGG | - | chr3_2:2708262-2708281 | None:intergenic | 40.0% | |
| ! | GCTTTTGGACATAATCCGTA+AGG | + | chr3_2:2708270-2708289 | Msa0391210:CDS | 40.0% |
| TCTCACTCTCTTCAACCTTA+CGG | - | chr3_2:2708288-2708307 | None:intergenic | 40.0% | |
| TTGAAGAGAGTGAGACATCT+TGG | + | chr3_2:2708293-2708312 | Msa0391210:CDS | 40.0% | |
| ! | TGTTGTTGTCGTTTGTGCTT+CGG | + | chr3_2:2708327-2708346 | Msa0391210:CDS | 40.0% |
| GTGCTTCGGTATGTAAATCA+TGG | + | chr3_2:2708341-2708360 | Msa0391210:intron | 40.0% | |
| CTTCGGTATGTAAATCATGG+AGG | + | chr3_2:2708344-2708363 | Msa0391210:intron | 40.0% | |
| GTCAAAACTCTTCAGCAATG+TGG | + | chr3_2:2708385-2708404 | Msa0391210:intron | 40.0% | |
| AAACTCTTCAGCAATGTGGA+AGG | + | chr3_2:2708389-2708408 | Msa0391210:intron | 40.0% | |
| ! | CACCGTCTTTGAAAAAGGTA+AGG | - | chr3_2:2708646-2708665 | None:intergenic | 40.0% |
| TAGCTGCCAAAAGGATAAGA+AGG | + | chr3_2:2708910-2708929 | Msa0391210:CDS | 40.0% | |
| ! | GTTGGACCTTCTTATCCTTT+TGG | - | chr3_2:2708919-2708938 | None:intergenic | 40.0% |
| AGAAAAATCATCTGCAGCCA+AGG | - | chr3_2:2708952-2708971 | None:intergenic | 40.0% | |
| CGAGCAAGCAACAAATATGT+TGG | + | chr3_2:2708972-2708991 | Msa0391210:CDS | 40.0% | |
| ! | TGGTAAACTGAGGCAAGTTT+TGG | + | chr3_2:2708992-2709011 | Msa0391210:CDS | 40.0% |
| CAGGATGAAATGTCGATAGA+AGG | - | chr3_2:2709038-2709057 | None:intergenic | 40.0% | |
| CTTCTATCGACATTTCATCC+TGG | + | chr3_2:2709036-2709055 | Msa0391210:CDS | 40.0% | |
| TTGTGAAGACTATAAGGACC+AGG | - | chr3_2:2709057-2709076 | None:intergenic | 40.0% | |
| ! | CGTATGGCAGGTCAAATTTT+TGG | + | chr3_2:2709090-2709109 | Msa0391210:intron | 40.0% |
| AGAGTTTCATCAAACACTGG+AGG | - | chr3_2:2709146-2709165 | None:intergenic | 40.0% | |
| ATCGATCAACAACAGCTACA+AGG | - | chr3_2:2709370-2709389 | None:intergenic | 40.0% | |
| CGATCTCATAATGTTTCTCC+TGG | + | chr3_2:2709386-2709405 | Msa0391210:CDS | 40.0% | |
| AATCTTGCAATTAGGAAGCG+CGG | + | chr3_2:2709424-2709443 | Msa0391210:CDS | 40.0% | |
| ACAAATCAAGCAGATGGCAA+AGG | - | chr3_2:2709504-2709523 | None:intergenic | 40.0% | |
| GCATAGTTCAAGAACCCAAC+GGG | + | chr3_2:2708113-2708132 | Msa0391210:CDS | 45.0% | |
| AGAGCAAGTGTTTGCTCCAT+CGG | + | chr3_2:2708167-2708186 | Msa0391210:CDS | 45.0% | |
| GATAGTGTCGCATCTTGCTA+TGG | + | chr3_2:2708189-2708208 | Msa0391210:CDS | 45.0% | |
| AACCTCTTCCTAAGGGAGAA+TGG | + | chr3_2:2708227-2708246 | Msa0391210:CDS | 45.0% | |
| ACCTCTTCCTAAGGGAGAAT+GGG | + | chr3_2:2708228-2708247 | Msa0391210:CDS | 45.0% | |
| AGACTTTCCCATTCTCCCTT+AGG | - | chr3_2:2708238-2708257 | None:intergenic | 45.0% | |
| CAGGCTAAGCATGCACATAA+AGG | - | chr3_2:2708519-2708538 | None:intergenic | 45.0% | |
| CTTTATGTGCATGCTTAGCC+TGG | + | chr3_2:2708517-2708536 | Msa0391210:intron | 45.0% | |
| ATCGGATAATCATGAGGACC+AGG | - | chr3_2:2708538-2708557 | None:intergenic | 45.0% | |
| GTCCAACTTCGTCATATCCT+TGG | + | chr3_2:2708932-2708951 | Msa0391210:CDS | 45.0% | |
| AGCCAAGGATATGACGAAGT+TGG | - | chr3_2:2708937-2708956 | None:intergenic | 45.0% | |
| ! | TTCTTCTTCACCAGCACTGA+AGG | + | chr3_2:2709166-2709185 | Msa0391210:CDS | 45.0% |
| ! | TCTTCTTCACCAGCACTGAA+GGG | + | chr3_2:2709167-2709186 | Msa0391210:CDS | 45.0% |
| AAGCTACCAGAATTGAGCAG+AGG | + | chr3_2:2709230-2709249 | Msa0391210:CDS | 45.0% | |
| AATGAGCCTCTGCTCAATTC+TGG | - | chr3_2:2709239-2709258 | None:intergenic | 45.0% | |
| TTTAACACGGCCCATGAAGT+CGG | - | chr3_2:2709324-2709343 | None:intergenic | 45.0% | |
| TTTCTCCTGGAGTGCGAAAA+TGG | + | chr3_2:2709399-2709418 | Msa0391210:CDS | 45.0% | |
| GCGCTTCCTAATTGCAAGAT+TGG | - | chr3_2:2709425-2709444 | None:intergenic | 45.0% | |
| GCATAGTTCAAGAACCCAAC+GGG | + | chr3_2:2708113-2708132 | Msa0391210:CDS | 45.0% | |
| AGAGCAAGTGTTTGCTCCAT+CGG | + | chr3_2:2708167-2708186 | Msa0391210:CDS | 45.0% | |
| GATAGTGTCGCATCTTGCTA+TGG | + | chr3_2:2708189-2708208 | Msa0391210:CDS | 45.0% | |
| AACCTCTTCCTAAGGGAGAA+TGG | + | chr3_2:2708227-2708246 | Msa0391210:CDS | 45.0% | |
| ACCTCTTCCTAAGGGAGAAT+GGG | + | chr3_2:2708228-2708247 | Msa0391210:CDS | 45.0% | |
| AGACTTTCCCATTCTCCCTT+AGG | - | chr3_2:2708238-2708257 | None:intergenic | 45.0% | |
| CAGGCTAAGCATGCACATAA+AGG | - | chr3_2:2708519-2708538 | None:intergenic | 45.0% | |
| CTTTATGTGCATGCTTAGCC+TGG | + | chr3_2:2708517-2708536 | Msa0391210:intron | 45.0% | |
| ATCGGATAATCATGAGGACC+AGG | - | chr3_2:2708538-2708557 | None:intergenic | 45.0% | |
| GTCCAACTTCGTCATATCCT+TGG | + | chr3_2:2708932-2708951 | Msa0391210:CDS | 45.0% | |
| AGCCAAGGATATGACGAAGT+TGG | - | chr3_2:2708937-2708956 | None:intergenic | 45.0% | |
| ! | TTCTTCTTCACCAGCACTGA+AGG | + | chr3_2:2709166-2709185 | Msa0391210:CDS | 45.0% |
| ! | TCTTCTTCACCAGCACTGAA+GGG | + | chr3_2:2709167-2709186 | Msa0391210:CDS | 45.0% |
| AAGCTACCAGAATTGAGCAG+AGG | + | chr3_2:2709230-2709249 | Msa0391210:CDS | 45.0% | |
| AATGAGCCTCTGCTCAATTC+TGG | - | chr3_2:2709239-2709258 | None:intergenic | 45.0% | |
| TTTAACACGGCCCATGAAGT+CGG | - | chr3_2:2709324-2709343 | None:intergenic | 45.0% | |
| TTTCTCCTGGAGTGCGAAAA+TGG | + | chr3_2:2709399-2709418 | Msa0391210:CDS | 45.0% | |
| GCGCTTCCTAATTGCAAGAT+TGG | - | chr3_2:2709425-2709444 | None:intergenic | 45.0% | |
| TGGAGCAAACACTTGCTCTC+AGG | - | chr3_2:2708166-2708185 | None:intergenic | 50.0% | |
| CAAGATGCGACACTATCCGA+TGG | - | chr3_2:2708186-2708205 | None:intergenic | 50.0% | |
| TCCCATTCTCCCTTAGGAAG+AGG | - | chr3_2:2708232-2708251 | None:intergenic | 50.0% | |
| TTAACACGGCCCATGAAGTC+GGG | - | chr3_2:2709323-2709342 | None:intergenic | 50.0% | |
| CTTCATGGGCCGTGTTAAAG+TGG | + | chr3_2:2709325-2709344 | Msa0391210:CDS | 50.0% | |
| !! | ATTGGCCATTTTCGCACTCC+AGG | - | chr3_2:2709407-2709426 | None:intergenic | 50.0% |
| ! | TTGCAATTAGGAAGCGCGGA+TGG | + | chr3_2:2709428-2709447 | Msa0391210:CDS | 50.0% |
| ! | TGCAATTAGGAAGCGCGGAT+GGG | + | chr3_2:2709429-2709448 | Msa0391210:CDS | 50.0% |
| AAGGCTTGGAAGGCAGAGAA+TGG | - | chr3_2:2709485-2709504 | None:intergenic | 50.0% | |
| TCAAGCAGATGGCAAAGGCT+TGG | - | chr3_2:2709499-2709518 | None:intergenic | 50.0% | |
| TGGAGCAAACACTTGCTCTC+AGG | - | chr3_2:2708166-2708185 | None:intergenic | 50.0% | |
| CAAGATGCGACACTATCCGA+TGG | - | chr3_2:2708186-2708205 | None:intergenic | 50.0% | |
| TCCCATTCTCCCTTAGGAAG+AGG | - | chr3_2:2708232-2708251 | None:intergenic | 50.0% | |
| TTAACACGGCCCATGAAGTC+GGG | - | chr3_2:2709323-2709342 | None:intergenic | 50.0% | |
| CTTCATGGGCCGTGTTAAAG+TGG | + | chr3_2:2709325-2709344 | Msa0391210:CDS | 50.0% | |
| !! | ATTGGCCATTTTCGCACTCC+AGG | - | chr3_2:2709407-2709426 | None:intergenic | 50.0% |
| ! | TTGCAATTAGGAAGCGCGGA+TGG | + | chr3_2:2709428-2709447 | Msa0391210:CDS | 50.0% |
| ! | TGCAATTAGGAAGCGCGGAT+GGG | + | chr3_2:2709429-2709448 | Msa0391210:CDS | 50.0% |
| AAGGCTTGGAAGGCAGAGAA+TGG | - | chr3_2:2709485-2709504 | None:intergenic | 50.0% | |
| TCAAGCAGATGGCAAAGGCT+TGG | - | chr3_2:2709499-2709518 | None:intergenic | 50.0% | |
| ! | CGACGTTTTCCCTTCAGTGC+TGG | - | chr3_2:2709179-2709198 | None:intergenic | 55.0% |
| AGATGGGATGAGCAGCGCAA+TGG | + | chr3_2:2709290-2709309 | Msa0391210:CDS | 55.0% | |
| TAACACGGCCCATGAAGTCG+GGG | - | chr3_2:2709322-2709341 | None:intergenic | 55.0% | |
| GCAGATGGCAAAGGCTTGGA+AGG | - | chr3_2:2709495-2709514 | None:intergenic | 55.0% | |
| ! | CGACGTTTTCCCTTCAGTGC+TGG | - | chr3_2:2709179-2709198 | None:intergenic | 55.0% |
| AGATGGGATGAGCAGCGCAA+TGG | + | chr3_2:2709290-2709309 | Msa0391210:CDS | 55.0% | |
| TAACACGGCCCATGAAGTCG+GGG | - | chr3_2:2709322-2709341 | None:intergenic | 55.0% | |
| GCAGATGGCAAAGGCTTGGA+AGG | - | chr3_2:2709495-2709514 | None:intergenic | 55.0% | |
| ACGACAACAACAGCACGCGC+AGG | - | chr3_2:2708319-2708338 | None:intergenic | 60.0% | |
| GGGATGAGCAGCGCAATGGT+TGG | + | chr3_2:2709294-2709313 | Msa0391210:CDS | 60.0% | |
| ! | TGGTTGGTGCCCCGACTTCA+TGG | + | chr3_2:2709310-2709329 | Msa0391210:CDS | 60.0% |
| ! | GGTTGGTGCCCCGACTTCAT+GGG | + | chr3_2:2709311-2709330 | Msa0391210:CDS | 60.0% |
| ACGACAACAACAGCACGCGC+AGG | - | chr3_2:2708319-2708338 | None:intergenic | 60.0% | |
| GGGATGAGCAGCGCAATGGT+TGG | + | chr3_2:2709294-2709313 | Msa0391210:CDS | 60.0% | |
| ! | TGGTTGGTGCCCCGACTTCA+TGG | + | chr3_2:2709310-2709329 | Msa0391210:CDS | 60.0% |
| ! | GGTTGGTGCCCCGACTTCAT+GGG | + | chr3_2:2709311-2709330 | Msa0391210:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 2708100 | 2709532 | 2708100 | ID=Msa0391210;Name=Msa0391210 |
| chr3_2 | mRNA | 2708100 | 2709532 | 2708100 | ID=Msa0391210-mRNA-1;Parent=Msa0391210;Name=Msa0391210-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|0|0|1|0.66|0.75|4|0|312 |
| chr3_2 | exon | 2708100 | 2708348 | 2708100 | ID=Msa0391210-mRNA-1:exon:818;Parent=Msa0391210-mRNA-1 |
| chr3_2 | exon | 2708535 | 2708616 | 2708535 | ID=Msa0391210-mRNA-1:exon:819;Parent=Msa0391210-mRNA-1 |
| chr3_2 | exon | 2708883 | 2709057 | 2708883 | ID=Msa0391210-mRNA-1:exon:820;Parent=Msa0391210-mRNA-1 |
| chr3_2 | exon | 2709100 | 2709532 | 2709100 | ID=Msa0391210-mRNA-1:exon:821;Parent=Msa0391210-mRNA-1 |
| chr3_2 | CDS | 2708100 | 2708348 | 2708100 | ID=Msa0391210-mRNA-1:cds;Parent=Msa0391210-mRNA-1 |
| chr3_2 | CDS | 2708535 | 2708616 | 2708535 | ID=Msa0391210-mRNA-1:cds;Parent=Msa0391210-mRNA-1 |
| chr3_2 | CDS | 2708883 | 2709057 | 2708883 | ID=Msa0391210-mRNA-1:cds;Parent=Msa0391210-mRNA-1 |
| chr3_2 | CDS | 2709100 | 2709532 | 2709100 | ID=Msa0391210-mRNA-1:cds;Parent=Msa0391210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
